ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 134 5e-51
2RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 107 7e-37
3RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 105 7e-37
4RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 104 2e-35
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 117 3e-26
6RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 114 2e-25
7RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 114 3e-25
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 110 3e-24
9RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 107 3e-23
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 105 9e-23
11RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 104 2e-22
12RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 104 2e-22
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 102 8e-22
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 99 8e-21
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 67 5e-11
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 48 2e-05
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 42 0.002
18EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-... 32 1.7
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 31 2.8
20EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha) 30 4.8
21GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 4.8
22L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2 30 6.3
23L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL) 30 6.3
24EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF... 29 8.2

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  134 bits (338), Expect(2) = 5e-51
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK
Sbjct: 362 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 421

Query: 390 TGSFYG 373
           TGSFYG
Sbjct: 422 TGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 5e-51
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -3

Query: 325 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 212
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  107 bits (266), Expect(2) = 7e-37
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K
Sbjct: 372 KLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIK 431

Query: 390 TGSFYG 373
            G+FYG
Sbjct: 432 RGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 7e-37
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 328 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 212
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  105 bits (263), Expect(2) = 7e-37
 Identities = 50/66 (75%), Positives = 59/66 (89%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           RLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+ 
Sbjct: 372 RLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIG 431

Query: 390 TGSFYG 373
            G+FYG
Sbjct: 432 RGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 7e-37
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 325 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 212
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  104 bits (260), Expect(2) = 2e-35
 Identities = 48/66 (72%), Positives = 60/66 (90%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+ 
Sbjct: 370 KLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAID 429

Query: 390 TGSFYG 373
            G+F+G
Sbjct: 430 RGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 2e-35
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 325 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 218
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  117 bits (292), Expect = 3e-26
 Identities = 54/66 (81%), Positives = 62/66 (93%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           RLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMK
Sbjct: 359 RLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMK 418

Query: 390 TGSFYG 373
           TG+FYG
Sbjct: 419 TGAFYG 424



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  114 bits (285), Expect = 2e-25
 Identities = 53/66 (80%), Positives = 62/66 (93%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM 
Sbjct: 372 KLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMN 431

Query: 390 TGSFYG 373
           TG+FYG
Sbjct: 432 TGTFYG 437



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  114 bits (284), Expect = 3e-25
 Identities = 53/66 (80%), Positives = 62/66 (93%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           RLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMK
Sbjct: 362 RLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMK 421

Query: 390 TGSFYG 373
           TGSFYG
Sbjct: 422 TGSFYG 427



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  110 bits (275), Expect = 3e-24
 Identities = 50/65 (76%), Positives = 62/65 (95%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMK
Sbjct: 368 KLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMK 427

Query: 390 TGSFY 376
           TGSF+
Sbjct: 428 TGSFF 432



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  107 bits (266), Expect = 3e-23
 Identities = 49/64 (76%), Positives = 61/64 (95%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K
Sbjct: 372 KLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIK 431

Query: 390 TGSF 379
            G+F
Sbjct: 432 RGTF 435



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  105 bits (262), Expect = 9e-23
 Identities = 50/64 (78%), Positives = 59/64 (92%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ 
Sbjct: 376 KLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAIN 435

Query: 390 TGSF 379
           TG+F
Sbjct: 436 TGNF 439



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  104 bits (260), Expect = 2e-22
 Identities = 49/62 (79%), Positives = 58/62 (93%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ 
Sbjct: 371 KLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAIN 430

Query: 390 TG 385
           TG
Sbjct: 431 TG 432



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  104 bits (260), Expect = 2e-22
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+ 
Sbjct: 376 KLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAIN 435

Query: 390 TGSFY 376
            GSF+
Sbjct: 436 NGSFF 440



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  102 bits (254), Expect = 8e-22
 Identities = 45/65 (69%), Positives = 63/65 (96%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K
Sbjct: 374 KLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIK 433

Query: 390 TGSFY 376
           +GSF+
Sbjct: 434 SGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 99.0 bits (245), Expect = 8e-21
 Identities = 45/65 (69%), Positives = 60/65 (92%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMK 391
           +LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K
Sbjct: 376 KLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIK 435

Query: 390 TGSFY 376
           +GSF+
Sbjct: 436 SGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = -1

Query: 567 LVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 448
           LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 370 LVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 418
           +LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 345 QLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 18/45 (40%), Positives = 28/45 (62%)
 Frame = -1

Query: 570 RLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 436
           R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 245 RVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289



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>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 543 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 388
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 387 GSFYG*KILHTHPPSLAA 334
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 555 RDGPVTFEQPKMTVEK 508
           R+GP TFEQP MT+EK
Sbjct: 17  REGPPTFEQPAMTIEK 32



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>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -1

Query: 543 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 388
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 387 GSFYG*KILHTHPPSLAA 334
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 440 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 544
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453



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>L2GL2_PONPY (Q5RCX2) Lethal(2) giant larvae protein homolog 2|
          Length = 1019

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 97  WQRPIHLLIICHSQYSFLQW 38
           WQR   LL+ CHS  S+ QW
Sbjct: 238 WQRDGRLLVSCHSDGSYCQW 257



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>L2GL2_HUMAN (Q6P1M3) Lethal(2) giant larvae protein homolog 2 (HGL)|
          Length = 1020

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 97  WQRPIHLLIICHSQYSFLQW 38
           WQR   LL+ CHS  S+ QW
Sbjct: 238 WQRDGRLLVSCHSDGSYCQW 257



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>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = -1

Query: 543 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 388
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 387 GSFYG*KILHTHPPSLAA 334
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,963,153
Number of Sequences: 219361
Number of extensions: 1603959
Number of successful extensions: 4249
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4248
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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