ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 874 0.0
2gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo... 704 0.0
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 680 0.0
4gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 609 e-171
5gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 509 e-141
6gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 448 e-123
7emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat... 392 e-106
8gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 281 1e-72
9dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
10dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
11dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
12dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
13dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 135 2e-28
14gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
15gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
16gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 133 7e-28
17dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 133 7e-28
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 133 7e-28
20dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 133 7e-28
21gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplas... 121 3e-24
22dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
23gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 113 6e-22
24gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 107 4e-20
25gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tet... 101 2e-18
26gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca... 100 1e-17
27gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 98 4e-17
28gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 96 2e-16
29gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 96 2e-16
30gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 96 2e-16
31gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 92 2e-15
32gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 82 2e-12
33emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase 80 9e-12
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
35dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
36gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 74 6e-10
37emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 56 1e-04
38gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 44 0.50
39gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl... 44 0.50
40emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, c... 44 0.50
41gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, co... 42 2.0
42gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, comp... 42 2.0
43gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, comp... 42 2.0
44gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, c... 42 2.0
45gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, com... 42 2.0
46dbj|AK040781.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 2.0
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
48gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet... 42 2.0
49emb|Y10657.1|CLRCAGENE C.littorale rca gene 42 2.0
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
51emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.0
52gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, comp... 42 2.0
53gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten... 40 7.7
54gb|U60105.1| Bos taurus large conductance calcium-activated pota... 40 7.7
55gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx... 40 7.7
56gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 40 7.7
57gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ... 40 7.7
58ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001... 40 7.7
59gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complet... 40 7.7
60gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete... 40 7.7
61gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, comp... 40 7.7
62gb|AF026000.2| Sus scrofa calcium-activated potassium channel al... 40 7.7
63gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Canc... 40 7.7
64gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co... 40 7.7
65ref|NM_174680.2| Bos taurus potassium large conductance calcium-... 40 7.7
66gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.7
67dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 7.7
68gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten... 40 7.7
69gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN... 40 7.7
70gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN... 40 7.7
71gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN... 40 7.7
72emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 7.7
73gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com... 40 7.7
74ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ... 40 7.7
75ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot... 40 7.7
76gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 40 7.7
77gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 40 7.7
78emb|BX571709.23| Zebrafish DNA sequence from clone DKEY-251M8 in... 40 7.7
79gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone... 40 7.7

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  874 bits (441), Expect = 0.0
 Identities = 479/485 (98%), Gaps = 5/485 (1%)
 Strand = Plus / Minus

                                                                        
Query: 91   tttgccaaatgggtatactcaatat-atttagagatatattaacaaaacatgcccagcaa 149
            |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1709 tttgccaaatgggtatacacaatattatttagagatatattaacaaaacatgcccagcaa 1650

                                                                        
Query: 150  tcgcttggatgcgatgcggacttag-gtaggtaaaacatcagatattaaaagtggcatgc 208
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1649 tcgcttggatgcgatgcggacttagtgtaggtaaaacatcagatattaaaagtggcatgc 1590

                                                                        
Query: 209  ttaaaaggtgtaaaggcagctgccgt-cgtcgctccttgccgttgggtcgtagttcttgg 267
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1589 ttaaaaggtgtaaaggcagctgccgttcgtcgctccttgccgttgggtcgtagttcttgg 1530

                                                                        
Query: 268  cattttggtcggtgcaaccttccggca-cgggcaaagtaccttgctgtgctcctttacct 326
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1529 cattttggtcggtgcaaccttccggcatcgggcaaagtaccttgctgtgctcctttacct 1470

                                                                        
Query: 327  cctcctatgcagcaagagatggtgggtgt-gtatggagaattttctaaccgtagaaggaa 385
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1469 cctcctatgcagcaagagatggtgggtgttgtatggagaattttctaaccgtagaaggaa 1410

                                                                        
Query: 386  ccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtca 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 ccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtca 1350

                                                                        
Query: 446  gcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 gcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagc 1290

                                                                        
Query: 506  agcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcacc 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 agcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcacc 1230

                 
Query: 566  agcct 570
            |||||
Sbjct: 1229 agcct 1225



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>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  704 bits (355), Expect = 0.0
 Identities = 475/512 (92%), Gaps = 11/512 (2%)
 Strand = Plus / Minus

                                                                       
Query: 63  tgacaaatgataagtaggtgtattggtctttgccaaatgggtatactcaatatatttaga 122
           |||| ||||||||||||   |||| |||||| |||||| |||||||||||||| ||||  
Sbjct: 803 tgaccaatgataagtagtcctatttgtctttaccaaataggtatactcaatatcttta-- 746

                                                                       
Query: 123 gatatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta---- 177
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
Sbjct: 745 --tatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaa 688

                                                                       
Query: 178 -ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcg 236
            | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcg 629

                                                                       
Query: 237 tcgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacg 296
           || ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || 
Sbjct: 628 tcactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtaca 569

                                                                       
Query: 297 ggcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtg 356
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ggcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtg 509

                                                                       
Query: 357 tatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcac 416
           |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 508 tatggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcac 449

                                                                       
Query: 417 ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgct 389

                                                                       
Query: 477 cctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcga 536
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 388 cctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaa 329

                                           
Query: 537 aggtcacgggcccgtcccgcgagttcaccagc 568
           ||||||| || |||||||||||||||||||||
Sbjct: 328 aggtcactggtccgtcccgcgagttcaccagc 297



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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  680 bits (343), Expect = 0.0
 Identities = 426/451 (94%), Gaps = 7/451 (1%)
 Strand = Plus / Minus

                                                                        
Query: 124  atatattaacaaaacatgcccagcaatcgcttggatgcgatgcgg-acttaggta----- 177
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
Sbjct: 1596 atatattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaag 1537

                                                                        
Query: 178  ggtaaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgt 237
            | |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 1536 gataaaacatcagatattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgt 1478

                                                                        
Query: 238  cgctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgg 297
            | ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || |
Sbjct: 1477 cactcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacag 1418

                                                                        
Query: 298  gcaaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgt 357
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gcaaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgt 1358

                                                                        
Query: 358  atggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacc 417
            ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1357 atggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcacc 1298

                                                                        
Query: 418  cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 cagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctc 1238

                                                                        
Query: 478  ctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 1237 ctggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaa 1178

                                           
Query: 538  ggtcacgggcccgtcccgcgagttcaccagc 568
            |||||| || |||||||||||||||||||||
Sbjct: 1177 ggtcactggtccgtcccgcgagttcaccagc 1147



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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  609 bits (307), Expect = e-171
 Identities = 324/327 (99%), Gaps = 2/327 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttcttgttnctgtttgcaacaaagncagaaggagtctccactgaaggaatgaatactgag 60
            |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 7847 ttcttgtt-ctgtttgcaacaaag-cagaaggagtctccactgaaggaatgaatactgag 7790

                                                                        
Query: 61   agtgacaaatgataagtaggtgtattggtctttgccaaatgggtatactcaatatattta 120
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7789 agtgacaaatgataagtaggtgtattggtctttgccaaatgggtatacacaatatattta 7730

                                                                        
Query: 121  gagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7729 gagatatattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggt 7670

                                                                        
Query: 181  aaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7669 aaaacatcagatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 7610

                                                                        
Query: 241  tccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggca 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7609 tccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggca 7550

                                       
Query: 301  aagtaccttgctgtgctcctttacctc 327
            |||||||||||||||||||||||||||
Sbjct: 7549 aagtaccttgctgtgctcctttacctc 7523



 Score =  492 bits (248), Expect = e-136
 Identities = 248/248 (100%)
 Strand = Plus / Minus

                                                                        
Query: 323  acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296

                                                                        
Query: 383  gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236

                                                                        
Query: 443  tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176

                                                                        
Query: 503  agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116

                    
Query: 563  accagcct 570
            ||||||||
Sbjct: 7115 accagcct 7108



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 449  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 508
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902

                                         
Query: 509  ttctcgactgtcatctttggctgctcgaa 537
            ||||| |  |||||||| ||||| |||||
Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873



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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  509 bits (257), Expect = e-141
 Identities = 397/440 (90%), Gaps = 9/440 (2%)
 Strand = Plus / Minus

                                                                        
Query: 138  catgcccagcaatcgcttggatgcgatgcgga-cttaggtag-----gtaaaacatcaga 191
            ||||||||||| ||||||| |||||||||||  ||||||||      || ||||||||||
Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534

                                                                        
Query: 192  -tattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 250
             || | |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474

                                                                        
Query: 251  tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 310
            ||||||| ||||||||||||   ||||||| |||||||||||||| |||||||| |||||
Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414

                                                                        
Query: 311  ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 370
             ||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||
Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgggtgt--atgaagagtgttc 1356

                                                                        
Query: 371  taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 430
            |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||
Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296

                                                                        
Query: 431  ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 490
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236

                                                                        
Query: 491  tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 550
            || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||
Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176

                                
Query: 551  tcccgcgagttcaccagcct 570
            ||||||||||||||||||||
Sbjct: 1175 tcccgcgagttcaccagcct 1156



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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  448 bits (226), Expect = e-123
 Identities = 229/230 (99%)
 Strand = Plus / Minus

                                                                        
Query: 96   caaatgggtatactcaatatatttagagatatattaacaaaacatgcccagcaatcgctt 155
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 caaatgggtatacacaatatatttagagatatattaacaaaacatgcccagcaatcgctt 1335

                                                                        
Query: 156  ggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaag 215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 ggatgcgatgcggacttaggtaggtaaaacatcagatattaaaagtggcatgcttaaaag 1275

                                                                        
Query: 216  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 1215

                                                              
Query: 276  tcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 tcggtgcaaccttccggcacgggcaaagtaccttgctgtgctcctttacc 1165



 Score =  392 bits (198), Expect = e-106
 Identities = 198/198 (100%)
 Strand = Plus / Minus

                                                                        
Query: 373  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 432
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108

                                                                        
Query: 433  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048

                                                                        
Query: 493  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988

                              
Query: 553  ccgcgagttcaccagcct 570
            ||||||||||||||||||
Sbjct: 987  ccgcgagttcaccagcct 970



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>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  392 bits (198), Expect = e-106
 Identities = 210/214 (98%)
 Strand = Plus / Minus

                                                                       
Query: 351 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 410
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249

                                                                       
Query: 411 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189

                                                                       
Query: 471 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129

                                             
Query: 531 gctcgaaggtcacgggcccgtcccgcgagttcac 564
           |||| |||||||| || |||||||||||||||||
Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcac 95



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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  281 bits (142), Expect = 1e-72
 Identities = 184/198 (92%)
 Strand = Plus / Minus

                                                                        
Query: 373  accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 432
            |||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304

                                                                        
Query: 433  catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 492
            |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244

                                                                        
Query: 493  cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 552
             |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184

                              
Query: 553  ccgcgagttcaccagcct 570
            ||||||||||||||||||
Sbjct: 1183 ccgcgagttcaccagcct 1166



 Score =  176 bits (89), Expect = 5e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                        
Query: 197  aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtc 256
            |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1489 aaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggttgggtc 1430

                                                                        
Query: 257  gtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttgctgtgc 316
            | ||||||||||||   ||||||| |||||||||||||| |||||||| ||||| |||||
Sbjct: 1429 gaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttgttgtgc 1370

                     
Query: 317  tcctttacc 325
            |||||||||
Sbjct: 1369 tcctttacc 1361



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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1394 ccctcctcct 1385



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1145



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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1432 ccctcctcct 1423



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1183



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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1431 ccctcctcct 1422



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1182



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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
            insert sequence
          Length = 1470

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1215 ccctcctcct 1206



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 966



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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  135 bits (68), Expect = 2e-28
 Identities = 115/130 (88%), Gaps = 3/130 (2%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1436 ccctcctcct 1427



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1187



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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                          
Query: 206    tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
              ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217

                                                 
Query: 266    ggcattttggtcggtgcaaccttccggcacgggca 300
              ||||    |||||||||||||||||||||| ||||
Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                          
Query: 369    tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 428
              |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365

                                                                          
Query: 429    ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 488
               ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425

                                                               
Query: 489    tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||  |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 108474



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                          
Query: 224    gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 283
              ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112

                             
Query: 284    accttccggcacggg 298
               ||  ||||||||||
Sbjct: 112113 tcccgccggcacggg 112127



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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                         
Query: 206   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
             ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098

                                                
Query: 266   ggcattttggtcggtgcaaccttccggcacgggca 300
             ||||    |||||||||||||||||||||| ||||
Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                         
Query: 369   tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 428
             |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242

                                                                         
Query: 429   ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 488
              ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302

                                                              
Query: 489   tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
             |||  |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 30351



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 224   gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 283
             ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989

                            
Query: 284   accttccggcacggg 298
              ||  ||||||||||
Sbjct: 33990 tcccgccggcacggg 34004



to top

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461

                                               
Query: 266  ggcattttggtcggtgcaaccttccggcacgggca 300
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaa 1151



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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371

                                               
Query: 266  ggcattttggtcggtgcaaccttccggcacgggca 300
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 135/164 (82%)
 Strand = Plus / Minus

                                                                        
Query: 374  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 433
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250

                                                                        
Query: 434  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 493
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190

                                                        
Query: 494  ccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
            |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1146



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 206      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360

                                                   
Query: 266      ggcattttggtcggtgcaaccttccggcacgggca 300
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                            
Query: 369      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 428
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504

                                                                            
Query: 429      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 488
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564

                                                                 
Query: 489      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 28303613



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 224      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 283
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251

                               
Query: 284      accttccggcacggg 298
                 ||  ||||||||||
Sbjct: 28307252 tcccgccggcacggg 28307266



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Plus

                                                                            
Query: 206      tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
                ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809

                                                   
Query: 266      ggcattttggtcggtgcaaccttccggcacgggca 300
                ||||    |||||||||||||||||||||| ||||
Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844



 Score =  105 bits (53), Expect = 2e-19
 Identities = 140/169 (82%)
 Strand = Plus / Plus

                                                                            
Query: 369      tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 428
                |||||||||||||||||||||||||||| || ||   |||||| ||||| ||||| ||||
Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953

                                                                            
Query: 429      ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 488
                 ||||| |||    ||||| ||||||||||||||||| || ||||||||||  || ||||
Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013

                                                                 
Query: 489      tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
                |||  |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 28286062



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                            
Query: 224      gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 283
                ||||||||||||||||||||| || || |||||||||||   |||   ||||||||||||
Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700

                               
Query: 284      accttccggcacggg 298
                 ||  ||||||||||
Sbjct: 28289701 tcccgccggcacggg 28289715



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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  133 bits (67), Expect = 7e-28
 Identities = 88/95 (92%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406

                                               
Query: 266  ggcattttggtcggtgcaaccttccggcacgggca 300
            ||||    |||||||||||||||||||||| ||||
Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 135/164 (82%)
 Strand = Plus / Minus

                                                                        
Query: 374  ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 433
            ||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||||
Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285

                                                                        
Query: 434  atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 493
            | |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||  
Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225

                                                        
Query: 494  ccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
            |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1181



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>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small
           isoform precursor, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 93

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                       
Query: 212 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 271
           ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  
Sbjct: 93  aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34

                                        
Query: 272 ttggtcggtgcaaccttccggcacgggca 300
             |||||||||||||||||||||| ||||
Sbjct: 33  agggtcggtgcaaccttccggcacaggca 5



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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/130 (87%), Gaps = 4/130 (3%)
 Strand = Plus / Minus

                                                                        
Query: 206  tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
            ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504

                                                                        
Query: 266  ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 322
            ||||    |||||||||||||||||||||| ||||   |||   ||||||||||||||| 
Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444

                      
Query: 323  acctcctcct 332
             |||||||||
Sbjct: 1443 ccctcctcct 1434



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                        
Query: 372  aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
            ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300

                                                                        
Query: 432  tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
            ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240

                                                          
Query: 492  gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
              |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaa 1194



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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  113 bits (57), Expect = 6e-22
 Identities = 165/201 (82%)
 Strand = Plus / Minus

                                                                        
Query: 370  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 429
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948

                                                                        
Query: 430  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 489
            ||||| |||  |||| || |||||||| | ||| || || ||||||||||| || |||||
Sbjct: 947  gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888

                                                                        
Query: 490  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 549
            ||  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 887  gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828

                                 
Query: 550  gtcccgcgagttcaccagcct 570
             ||| ||||||||||||||||
Sbjct: 827  ctccagcgagttcaccagcct 807



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 275
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090

                          
Query: 276  tcggtgcaaccttc 289
            ||||| ||||||||
Sbjct: 1089 tcggtacaaccttc 1076



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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  107 bits (54), Expect = 4e-20
 Identities = 159/194 (81%)
 Strand = Plus / Minus

                                                                        
Query: 377  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 436
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135

                                                                        
Query: 437  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 496
            ||  |||| || |||||||| | ||| || || ||||||||||| || |||||||  |||
Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075

                                                                        
Query: 497  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 556
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015

                          
Query: 557  gagttcaccagcct 570
            ||||||||||||||
Sbjct: 1014 gagttcaccagcct 1001



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 275
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246

                          
Query: 276  tcggtgcaaccttc 289
            ||||| ||||||||
Sbjct: 1245 tcggtacaaccttc 1232



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>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic
           sequence
          Length = 234

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                       
Query: 206 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
           |||||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76

                                              
Query: 266 ggcattttggtcggtgcaaccttccggcacgggca 300
           ||||    ||||||  |||||||||||||| ||||
Sbjct: 75  ggcaacagggtcgggtcaaccttccggcacaggca 41



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>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 137/166 (82%)
 Strand = Plus / Minus

                                                                       
Query: 372 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 431
           ||||||||||||||||||||||||| || ||   |||||| ||||| ||||| |||| ||
Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506

                                                                       
Query: 432 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 491
           ||| |||    ||||| ||||||||||||||||| || ||||||||||  || |||||||
Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446

                                                         
Query: 492 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaa 537
             |||||||| |  ||||| ||||  |||||||| |||||||||||
Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaa 400



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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 370  ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 429
            |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| 
Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249

                                                                        
Query: 430  gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 489
            ||||| |||  |||| || |||||||| | ||| || || ||||| ||||| || |||||
Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189

                                                                        
Query: 490  gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 549
             |  |||||||| |||||||| || |  |||||||| |||||| |||| |||   |||||
Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129

                                 
Query: 550  gtcccgcgagttcaccagcct 570
             ||| ||||||||||||||||
Sbjct: 1128 ctccagcgagttcaccagcct 1108



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 275
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391

                          
Query: 276  tcggtgcaaccttc 289
            ||||| ||||||||
Sbjct: 1390 tcggtacaaccttc 1377



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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                       
Query: 378 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 437
           ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860

                                                                       
Query: 438 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 497
           |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800

                                                   
Query: 498 actctagcagcttctcgactgtcatctttggctgctcgaa 537
           |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760



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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 437
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 438  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 497
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 498  actctagcagcttctcgactgtcatctttggctgctcgaa 537
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Minus

                                                                        
Query: 378  agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 437
            ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | ||
Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255

                                                                        
Query: 438  aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 497
            |  ||||||||||||||||||||||||| || |||||||||   || |||||||| ||||
Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195

                                                    
Query: 498  actctagcagcttctcgactgtcatctttggctgctcgaa 537
            |||| |  ||||||||||  || ||||| |||||||||||
Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155



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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 157/194 (80%)
 Strand = Plus / Minus

                                                                        
Query: 377  tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 436
            |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| |
Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105

                                                                        
Query: 437  taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 496
            ||  |||| || |||||||| | ||| || || ||||| ||||| || ||||| |  |||
Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045

                                                                        
Query: 497  tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 556
            ||||| |||||||| || |  |||||||| |||||| |||| |||   ||||| ||| ||
Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985

                          
Query: 557  gagttcaccagcct 570
            ||||||||||||||
Sbjct: 984  gagttcaccagcct 971



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                        
Query: 216  gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 275
            ||||| ||||||||||| ||||||||||| ||||| |||||| ||||  |||||||  ||
Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216

                          
Query: 276  tcggtgcaaccttc 289
            ||||| ||||||||
Sbjct: 1215 tcggtacaaccttc 1202



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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 449  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 508
            ||||||||||||||||| || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333

                                         
Query: 509  ttctcgactgtcatctttggctgctcgaa 537
            ||||| |  |||||||| ||||| |||||
Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304



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>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                       
Query: 395 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 454
           |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || 
Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59

                                                                   
Query: 455 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 510
           || | ||| |||||||||||||||||||| |||||||  || ||||||||||||||
Sbjct: 58  actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                           
Query: 206     tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
               |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354

                                                  
Query: 266     ggcattttggtcggtgcaaccttccggcacgggca 300
               ||||    |||||||||||||||||||||| ||||
Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319



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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 206   tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 265
             |||||| ||||||||||||||| ||| ||||| |||| | |||||||||||  |||| ||
Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728

                                                
Query: 266   ggcattttggtcggtgcaaccttccggcacgggca 300
             ||||    |||||||||||||||||||||| ||||
Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693



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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 449  agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 508
            |||||||| ||||| || || |||||||||||||| |||||||| |||||||| |  |||
Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183

                                         
Query: 509  ttctcgactgtcatctttggctgctcgaa 537
            |||||||  |||||||| ||||| |||||
Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaa 1154



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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Minus

                                                                        
Query: 406  gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 465
            |||||||||||| ||||| |||| ||||| |||  | ||||| |  || || | ||| ||
Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304

                                                                        
Query: 466  attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 525
            ||| || ||||| ||||| |||||||  |||||||| || ||||| ||||  ||||||||
Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244

                        
Query: 526  tggctgctcgaa 537
             |||||||||||
Sbjct: 1243 cggctgctcgaa 1232



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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 398  gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 447
            |||||||||||||||||||| || || ||||  ||||||||  |||||||
Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306



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>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 411   catcacccagagctgcctggct 432
             ||||||||||||||||||||||
Sbjct: 51275 catcacccagagctgcctggct 51254



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>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence
          Length = 153155

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 111   aatatatttagagatatattaa 132
             ||||||||||||||||||||||
Sbjct: 67942 aatatatttagagatatattaa 67963



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>gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, complete sequence
          Length = 178257

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aatgataagtaggtgtattgg 88
              |||||||||||||||||||||
Sbjct: 109370 aatgataagtaggtgtattgg 109390



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>gb|AC138278.9| Mus musculus chromosome 8, clone RP23-378E4, complete sequence
          Length = 177245

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   tatatttagagatatattaac 133
             |||||||||||||||||||||
Sbjct: 12315 tatatttagagatatattaac 12335



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>gb|AC161354.2| Mus musculus chromosome 8, clone RP23-373C4, complete sequence
          Length = 98660

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   tatatttagagatatattaac 133
             |||||||||||||||||||||
Sbjct: 66387 tatatttagagatatattaac 66367



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>gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, complete sequence
          Length = 217738

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aatgataagtaggtgtattgg 88
              |||||||||||||||||||||
Sbjct: 149522 aatgataagtaggtgtattgg 149502



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>gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, complete sequence
          Length = 168084

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aatgataagtaggtgtattgg 88
              |||||||||||||||||||||
Sbjct: 131097 aatgataagtaggtgtattgg 131077



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>dbj|AK040781.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530024M06 product:Hypothetical
            protein FLJ33092 (UST1r) homolog [Homo sapiens], full
            insert sequence
          Length = 2605

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 68   aatgataagtaggtgtattgg 88
            |||||||||||||||||||||
Sbjct: 2351 aatgataagtaggtgtattgg 2331



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     aaacatcagatattaaaagtg 202
               |||||||||||||||||||||
Sbjct: 3040440 aaacatcagatattaaaagtg 3040420



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>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 333   atgcagcaagagatggtgggt 353
             |||||||||||||||||||||
Sbjct: 63530 atgcagcaagagatggtgggt 63550



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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 449  agctgcacacgcttgacattgtcctgctc 477
            |||||||| ||||||||||| ||||||||
Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     aaacatcagatattaaaagtg 202
               |||||||||||||||||||||
Sbjct: 3040385 aaacatcagatattaaaagtg 3040365



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>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 159711

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    aaacatcagatattaaaagtg 202
              |||||||||||||||||||||
Sbjct: 114403 aaacatcagatattaaaagtg 114423



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>gb|AC164586.7| Mus musculus chromosome 8, clone RP24-258B3, complete sequence
          Length = 105452

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 113  tatatttagagatatattaac 133
            |||||||||||||||||||||
Sbjct: 6217 tatatttagagatatattaac 6197



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>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cctttacctcctcctatgca 337
             ||||||||||||||||||||
Sbjct: 46359 cctttacctcctcctatgca 46378



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>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1542 catcgcccagagctgcctggctca 1565



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>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  cctttacctcctcctatgca 337
            ||||||||||||||||||||
Sbjct: 1637 cctttacctcctcctatgca 1656



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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 407  ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 466
            ||||||||||| ||||| |||| |  ||||||  ||||||| |  || || | |||||| 
Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287

                                    
Query: 467  ttgtcctgctcctggacgagcatg 490
            || |||||||||||||| ||||||
Sbjct: 1286 ttctcctgctcctggacaagcatg 1263



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>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cctttacctcctcctatgca 337
             ||||||||||||||||||||
Sbjct: 32945 cctttacctcctcctatgca 32964



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>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 gtcagcaagctgcacacgct 461
           ||||||||||||||||||||
Sbjct: 242 gtcagcaagctgcacacgct 223



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>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence
          Length = 177402

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    tcagatattaaaagtggcat 206
              ||||||||||||||||||||
Sbjct: 141058 tcagatattaaaagtggcat 141077



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>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence
          Length = 163782

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    tcagatattaaaagtggcat 206
              ||||||||||||||||||||
Sbjct: 142564 tcagatattaaaagtggcat 142583



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>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence
          Length = 204813

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   tcagatattaaaagtggcat 206
             ||||||||||||||||||||
Sbjct: 95930 tcagatattaaaagtggcat 95911



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>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>gb|AC139338.3| Homo sapiens 3 BAC RP11-449O23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166149

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aatatatttagagatatatt 130
             ||||||||||||||||||||
Sbjct: 30454 aatatatttagagatatatt 30473



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>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ttgacattgtcctgctcctg 480
              ||||||||||||||||||||
Sbjct: 126438 ttgacattgtcctgctcctg 126419



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>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306,  section 128 of 469 of the
            complete genome
          Length = 11388

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 215  ggtgtaaaggcagctgccgtcgtcgctc 242
            |||||| |||| ||||||||||||||||
Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133



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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   aaacatgcccagcaatcgcttgga 158
             |||||||||||||||||| |||||
Sbjct: 41692 aaacatgcccagcaatcgattgga 41715



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>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   cctttacctcctcctatgca 337
             ||||||||||||||||||||
Sbjct: 34662 cctttacctcctcctatgca 34681



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>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1636 catcgcccagagctgcctggctca 1659



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>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 2003 catcgcccagagctgcctggctca 2026



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>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1912 catcgcccagagctgcctggctca 1935



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>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tggcatgcttaaaaggtgta 220
             ||||||||||||||||||||
Sbjct: 78235 tggcatgcttaaaaggtgta 78254



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>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ttgacattgtcctgctcctg 480
              ||||||||||||||||||||
Sbjct: 106960 ttgacattgtcctgctcctg 106979



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>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 411  catcacccagagctgcctggctca 434
            |||| |||||||||||||||||||
Sbjct: 1596 catcgcccagagctgcctggctca 1619



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>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 307 cttgctgtgctcctttacctcctc 330
           ||||||| ||||||||||||||||
Sbjct: 648 cttgctgggctcctttacctcctc 625



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>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   cctttacctcctcctatgca 337
             ||||||||||||||||||||
Sbjct: 27755 cctttacctcctcctatgca 27736



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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aatatatttagagatatatt 130
             ||||||||||||||||||||
Sbjct: 62504 aatatatttagagatatatt 62485



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>emb|BX571709.23| Zebrafish DNA sequence from clone DKEY-251M8 in linkage group 11,
             complete sequence
          Length = 154382

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    tgaatactgagagtgacaaatgat 73
             ||||||||||||||| ||||||||
Sbjct: 41193 tgaatactgagagtgtcaaatgat 41216



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>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete
              sequence
          Length = 230848

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    atcagatattaaaagtggcatgct 209
              ||||||||||||||||| ||||||
Sbjct: 127875 atcagatattaaaagtgccatgct 127852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,445,916
Number of Sequences: 3902068
Number of extensions: 4445916
Number of successful extensions: 86211
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 85881
Number of HSP's gapped (non-prelim): 279
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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