Clone Name | rbah61j19 |
---|---|
Clone Library Name | barley_pub |
>PLA2R_RABIT (P49260) 180 kDa secretory phospholipase A2 receptor precursor| (PLA2-R) Length = 1458 Score = 33.9 bits (76), Expect = 0.33 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -3 Query: 448 KW--GNPPPLENGSTSNLSTPPNGASSSDQPER**REV*SVRPFYHFDSSWWYESLTKMG 275 KW GNP N S S++ P+ +++DQ + S P +HF W++E K G Sbjct: 1030 KWLNGNPVAYSNWSPSDIINIPSYNTTADQKPIPLCALLSSNPNFHFTGKWYFEDCGKEG 1089 Query: 274 F 272 + Sbjct: 1090 Y 1090
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 32.7 bits (73), Expect = 0.74 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -3 Query: 442 GNPPPLENGSTSNLSTPPNGASSSDQP 362 G PPP+ S STPP G SSS QP Sbjct: 1034 GGPPPITPPSCPPTSTPPAGPSSSSQP 1060
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 32.7 bits (73), Expect = 0.74 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -3 Query: 442 GNPPPLENGSTSNLSTPPNGASSSDQP 362 G PPP+ S STPP G SSS QP Sbjct: 1034 GGPPPITPPSCPPTSTPPAGPSSSSQP 1060
>RIG_DROME (Q86BY9) Protein rigor mortis| Length = 1235 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -3 Query: 538 VAAHPSEANQFALGLTDGSVYVMEPLESERKW 443 +A P ++N+FA+ D SVYVME +ER W Sbjct: 747 IAWCPLDSNKFAVSGNDRSVYVMEFQPTERNW 778
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 31.6 bits (70), Expect = 1.7 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = -3 Query: 538 VAAHPSEANQFALGLTDGSVYVMEPLESERKWGNPPPLENGSTSNLSTPPNGASSS 371 + + S + F LG+ +G V++P + +W PP + ++ +L P AS + Sbjct: 30 LGSRASPVSGFQLGVVEGEWRVVQPAYGQARWTTSPPPASPTSGSLRRPTLSASKA 85
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 31.2 bits (69), Expect = 2.2 Identities = 21/60 (35%), Positives = 26/60 (43%) Frame = -3 Query: 550 HPVVVAAHPSEANQFALGLTDGSVYVMEPLESERKWGNPPPLENGSTSNLSTPPNGASSS 371 HP + H S A+ LTD S M S R P + S S+ S +GASSS Sbjct: 996 HPAALTTHHSPAHLATPKLTDSSTDQMSATSSHRTASTSPSSSSASASS-SAATSGASSS 1054
>LGT_RHOPA (P60973) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 286 Score = 29.6 bits (65), Expect = 6.3 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = -3 Query: 547 PVVVAAHPSEANQFAL----GLTDGSVYVMEPLESERKWGNPPPL 425 PV VA P +AL G+ G +Y L+ +R WG P P+ Sbjct: 13 PVAVAIGPFAIRWYALAYIAGIVIGWLYARMLLQRQRLWGGPSPI 57
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 29.3 bits (64), Expect = 8.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 442 GNPPPLENGSTSNLSTPPNGASSSDQP 362 G PPP+ + + STPP G +S QP Sbjct: 1042 GGPPPITPPTCPSTSTPPAGPGTSAQP 1068
>LGT_BRAJA (Q89DJ5) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 282 Score = 29.3 bits (64), Expect = 8.2 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = -3 Query: 547 PVVVAAHPSEANQFAL----GLTDGSVYVMEPLESERKWGNPPPL 425 P+ + P +AL G+ G +Y L++ER WG P P+ Sbjct: 14 PIAIEIGPFAIRWYALAYICGIVFGWLYARSLLKNERLWGGPAPI 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,213,750 Number of Sequences: 219361 Number of extensions: 1648318 Number of successful extensions: 4419 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4414 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)