ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61j13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009050.1| Triticum aestivum clone wdk9n1.pk001.m5:fis, full insert mRNA sequence Length = 1147 Score = 749 bits (378), Expect = 0.0 Identities = 440/457 (96%), Gaps = 4/457 (0%) Strand = Plus / Minus Query: 89 agtccagaacagg-gcactgacaaggcccccaagacatacaagctgttacaattagttgc 147 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 1116 agtccagaacaggcgcactgacaaggctcc-aagacatacaagctgttacaattagttgc 1058 Query: 148 tacggctacaagtaaatctagagcatcaccgacatacaccgaataacaacacagcaagac 207 || | ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 1057 taagactacaagtaaatctagaacatcaccgacatacaccaaataacaacacagcaagac 998 Query: 208 ccctaaggctggtactaatctcaaagcaacaactgaatgcacatccacattgggcattcc 267 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 997 ccctaaggctggtactaatctcaaagcaacaactgaatgcacatcca--ttgggcattcc 940 Query: 268 gtcccacatgcgtctttacagtaagtcaaattcttggatcttcacacatgagccgtggag 327 ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 939 gtcccacatgcatctttacagtaagtcaaatccttggatcttcagacatgagccgtggag 880 Query: 328 gaatccgatatcatgctctggccctcttgctactgctgctgcaattcgggcatttgtagt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 gaatccgatatcatgctctggccctcttgctactgctgctgcaattcgggcatttgtagt 820 Query: 388 gcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtct 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 819 gcttgatgtgctcagctttggcaggggtgatcttcacacacttaccgtggaaccatgtct 760 Query: 448 cgcaagcatcacaacagatccagaattcatcctgcccatagttatcgttacacgcaccac 507 | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 759 cacaagcatcacagcagatccagaattcatcctgtccatagttatcgttacacgcaccac 700 Query: 508 ataatgccttttcgtgttcttctccctcttcttcctc 544 ||||||||||||| ||||||||||||||||||||||| Sbjct: 699 ataatgccttttcatgttcttctccctcttcttcctc 663
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 279 gtctttacagtaagtcaaattcttggatcttcacacatgagccgtggaggaatccgatat 338 |||||||||| |||||||||||||| |||||| |||| |||| | |||| |||| || Sbjct: 20068 gtctttacagcgagtcaaattcttggttcttcagacataagccatagagggatccaccat 20009 Query: 339 catgctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgc 398 || |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 20008 caagctctggctctcttgctactactgctgcagttcgggcacttgtagtgcttgatgtgc 19949 Query: 399 tcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatca 458 ||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 19948 tcagccttggcaggggttatcttgacacacttaccgtggaaccatgtctcacaagcatcg 19889 Query: 459 caacagatccagaattcatcctgcccatagttatcgttacacgcaccacataatgccttt 518 || ||||||||||| |||||||| |||||||| || ||| ||||||||||||| ||| Sbjct: 19888 cagcagatccagaactcatcctgtccatagttgtcaccacatgcaccacataatgtgttt 19829 Query: 519 tcgtgttcttct 530 ||||| |||||| Sbjct: 19828 tcgtgatcttct 19817
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 279 gtctttacagtaagtcaaattcttggatcttcacacatgagccgtggaggaatccgatat 338 |||||||||| |||||||||||||| |||||| |||| |||| | |||| |||| || Sbjct: 120756 gtctttacagcgagtcaaattcttggttcttcagacataagccatagagggatccaccat 120697 Query: 339 catgctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgc 398 || |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 120696 caagctctggctctcttgctactactgctgcagttcgggcacttgtagtgcttgatgtgc 120637 Query: 399 tcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatca 458 ||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 120636 tcagccttggcaggggttatcttgacacacttaccgtggaaccatgtctcacaagcatcg 120577 Query: 459 caacagatccagaattcatcctgcccatagttatcgttacacgcaccacataatgccttt 518 || ||||||||||| |||||||| |||||||| || ||| ||||||||||||| ||| Sbjct: 120576 cagcagatccagaactcatcctgtccatagttgtcaccacatgcaccacataatgtgttt 120517 Query: 519 tcgtgttcttct 530 ||||| |||||| Sbjct: 120516 tcgtgatcttct 120505
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Plus Query: 279 gtctttacagtaagtcaaattcttggatcttcacacatgagccgtggaggaatccgatat 338 |||||||||| |||||||||||||| |||||| |||| |||| | |||| |||| || Sbjct: 7696199 gtctttacagcgagtcaaattcttggttcttcagacataagccatagagggatccaccat 7696258 Query: 339 catgctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgc 398 || |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 7696259 caagctctggctctcttgctactactgctgcagttcgggcacttgtagtgcttgatgtgc 7696318 Query: 399 tcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatca 458 ||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 7696319 tcagccttggcaggggttatcttgacacacttaccgtggaaccatgtctcacaagcatcg 7696378 Query: 459 caacagatccagaattcatcctgcccatagttatcgttacacgcaccacataatgccttt 518 || ||||||||||| |||||||| |||||||| || ||| ||||||||||||| ||| Sbjct: 7696379 cagcagatccagaactcatcctgtccatagttgtcaccacatgcaccacataatgtgttt 7696438 Query: 519 tcgtgttcttct 530 ||||| |||||| Sbjct: 7696439 tcgtgatcttct 7696450
>dbj|AK103215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122M22, full insert sequence Length = 1199 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 279 gtctttacagtaagtcaaattcttggatcttcacacatgagccgtggaggaatccgatat 338 |||||||||| |||||||||||||| |||||| |||| |||| | |||| |||| || Sbjct: 921 gtctttacagcgagtcaaattcttggttcttcagacataagccatagagggatccaccat 862 Query: 339 catgctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgc 398 || |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 861 caagctctggctctcttgctactactgctgcagttcgggcacttgtagtgcttgatgtgc 802 Query: 399 tcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatca 458 ||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 801 tcagccttggcaggggttatcttgacacacttaccgtggaaccatgtctcacaagcatcg 742 Query: 459 caacagatccagaattcatcctgcccatagttatcgttacacgcaccacataatgccttt 518 || ||||||||||| |||||||| |||||||| || ||| ||||||||||||| ||| Sbjct: 741 cagcagatccagaactcatcctgtccatagttgtcaccacatgcaccacataatgtgttt 682 Query: 519 tcgtgttcttct 530 ||||| |||||| Sbjct: 681 tcgtgatcttct 670
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 238 bits (120), Expect = 2e-59 Identities = 219/252 (86%) Strand = Plus / Plus Query: 279 gtctttacagtaagtcaaattcttggatcttcacacatgagccgtggaggaatccgatat 338 |||||||||| |||||||||||||| |||||| |||| |||| | |||| |||| || Sbjct: 7766286 gtctttacagcgagtcaaattcttggttcttcagacataagccatagagggatccaccat 7766345 Query: 339 catgctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgc 398 || |||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 7766346 caagctctggctctcttgctactactgctgcagttcgggcacttgtagtgcttgatgtgc 7766405 Query: 399 tcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatca 458 ||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||| Sbjct: 7766406 tcagccttggcaggggttatcttgacacacttaccgtggaaccatgtctcacaagcatcg 7766465 Query: 459 caacagatccagaattcatcctgcccatagttatcgttacacgcaccacataatgccttt 518 || ||||||||||| |||||||| |||||||| || ||| ||||||||||||| ||| Sbjct: 7766466 cagcagatccagaactcatcctgtccatagttgtcaccacatgcaccacataatgtgttt 7766525 Query: 519 tcgtgttcttct 530 ||||| |||||| Sbjct: 7766526 tcgtgatcttct 7766537
>gb|AY110398.1| Zea mays CL736_1 mRNA sequence Length = 1234 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Minus Query: 342 gctctggccctcttgctactgctgctgcaattcgggcatttgtagtgcttgatgtgctca 401 |||| ||| ||||||| ||| | |||||| ||||| || ||||||||||||||||| || Sbjct: 889 gctcgggctctcttgccactaccgctgcagttcggacacttgtagtgcttgatgtgttcg 830 Query: 402 gctttggcaggagtgatcttcacacacttaccgtggaaccatgtctcgcaagcatcacaa 461 || ||||||||||||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 829 gccttggcaggagtgatcttgacacacttgccatggaaccaagtctcgcacgcatcacag 770 Query: 462 cagatccagaattcatcctgcccatagtt 490 || |||||||| |||||||| || ||||| Sbjct: 769 catatccagaactcatcctgtccgtagtt 741
>gb|AY108533.1| Zea mays PCO147142 mRNA sequence Length = 1128 Score = 105 bits (53), Expect = 1e-19 Identities = 101/117 (86%) Strand = Plus / Minus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 ||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| | Sbjct: 846 tgctgcaatctgggcatttgtagtgcttgatgtgctcagctcgtgcaggcgtgatcttga 787 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatcct 480 ||||||| || ||| |||| ||||||| ||||||||||||||||||||| |||| Sbjct: 786 cacacttcccatggtaccaccgctcgcaactatcacaacagatccagaattcgtcct 730
>gb|L07291.1|ALFNABP Alfalfa nucleic acid binding protein (alfin-1) mRNA, complete cds Length = 904 Score = 103 bits (52), Expect = 6e-19 Identities = 91/104 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| ||||||||||| ||||| ||||||||||| || || ||||| ||||| Sbjct: 770 gggcacttgtattgcttgatgtgttcagccttggcaggagtaattttaacacatttacca 711 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 710 tggaaccatttctcgcacatatcacaacagatccagaattcatc 667
>ref|NM_101318.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT1G14510 mRNA, complete cds Length = 1314 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||||||||| || ||||| |||||||| || || || ||||||||||| || || || Sbjct: 996 gggcatttgtaatgtttgatatgctcagcctttgctggtgtgatcttcacgcatttccca 937 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatcctgcccatagttatcg 494 ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 936 tggaaccatttctcgcaagcatcacaacatatccagaactcatctcctccatagttgtcg 877 Query: 495 ttacacgcaccaca 508 |||||||||||| Sbjct: 876 ccacacgcaccaca 863
>gb|BT006199.1| Arabidopsis thaliana At1g14510 mRNA, complete cds Length = 759 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||||||||| || ||||| |||||||| || || || ||||||||||| || || || Sbjct: 725 gggcatttgtaatgtttgatatgctcagcctttgctggtgtgatcttcacgcatttccca 666 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatcctgcccatagttatcg 494 ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 665 tggaaccatttctcgcaagcatcacaacatatccagaactcatctcctccatagttgtcg 606 Query: 495 ttacacgcaccaca 508 |||||||||||| Sbjct: 605 ccacacgcaccaca 592
>gb|DQ010328.1| Solanum tuberosum putative alfin-like transcription factor (fin1) mRNA, complete cds Length = 747 Score = 99.6 bits (50), Expect = 9e-18 Identities = 86/98 (87%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaac 440 ||||| |||||||| ||||||||||| || ||||||||||||||||| || || |||||| Sbjct: 710 ttgtactgcttgatatgctcagctttagctggagtgatcttcacacattttccatggaac 651 Query: 441 catgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||||||| |||||| || |||||||||||||| Sbjct: 650 catctctcgcaaatatcacagcaaatccagaattcatc 613
>gb|AY088087.1| Arabidopsis thaliana clone 41104 mRNA, complete sequence Length = 1280 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||||||||| || ||||| |||||||| || || || ||||||||||| || || || Sbjct: 996 gggcatttgtaatgtttgatatgctcagcctttgctggtgtgatcttcacgcatttccca 937 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatcctgcccatagttatcg 494 ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 936 tggaaccatttctcgcaagcatcacaacatatccagaactcatctcctccatagttgtcg 877 Query: 495 ttacacgcaccaca 508 |||||||||||| Sbjct: 876 ccacacgcaccaca 863
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||||||||| || ||||| |||||||| || || || ||||||||||| || || || Sbjct: 93284 gggcatttgtaatgtttgatatgctcagcctttgctggtgtgatcttcacgcatttccca 93343 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatcctgcccatagttatcg 494 ||||||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct: 93344 tggaaccatttctcgcaagcatcacaacatatccagaactcatctcctccatagttgtcg 93403 Query: 495 ttacacgcaccaca 508 |||||||||||| Sbjct: 93404 ccacacgcaccaca 93417
>emb|BX818105.1|CNS0ACHN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1019 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||||||||| || ||||| |||||||| || || || ||||||||||| || || || Sbjct: 774 gggcatttgtaatgtttgatatgctcagcctttgctggtgtgatcttcacgcatttccca 715 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatcctgcccatagttatcg 494 ||||||||| |||||||||| |||||||| |||||||| ||||| |||||||| ||| Sbjct: 714 tggaaccatttctcgcaagcctcacaacatatccagaactcatctcctccatagttgtcg 655 Query: 495 ttacacgcaccaca 508 |||||||||||| Sbjct: 654 ccacacgcaccaca 641
>gb|BT020505.1| Arabidopsis thaliana At5g20510 gene, complete cds Length = 783 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 |||||||| | ||||| ||||| |||||||| ||||| ||| | || ||||||||||||| Sbjct: 763 tgctgcaagtagggcacttgtaatgcttgatatgctccgctctagctggagtgatcttca 704 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||| |||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 703 cacactccccgtggaaccatttctcgcacatgtcacagcaaatccagaattcatc 649
>ref|NM_122058.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G20510 mRNA, complete cds Length = 1229 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 |||||||| | ||||| ||||| |||||||| ||||| ||| | || ||||||||||||| Sbjct: 810 tgctgcaagtagggcacttgtaatgcttgatatgctccgctctagctggagtgatcttca 751 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||| |||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 750 cacactccccgtggaaccatttctcgcacatgtcacagcaaatccagaattcatc 696
>ref|NM_122057.2| Arabidopsis thaliana arsenate reductase (glutaredoxin)/ electron transporter/ thiol-disulfide exchange intermediate AT5G20500 mRNA, complete cds Length = 1064 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 |||||||| | ||||| ||||| |||||||| ||||| ||| | || ||||||||||||| Sbjct: 808 tgctgcaagtagggcacttgtaatgcttgatatgctccgctctagctggagtgatcttca 867 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||| |||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 868 cacactccccgtggaaccatttctcgcacatgtcacagcaaatccagaattcatc 922
>gb|BT015937.1| Arabidopsis thaliana At5g20510 mRNA, complete cds Length = 907 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Minus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 |||||||| | ||||| ||||| |||||||| ||||| ||| | || ||||||||||||| Sbjct: 806 tgctgcaagtagggcacttgtaatgcttgatatgctccgctctagctggagtgatcttca 747 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||| |||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 746 cacactccccgtggaaccatttctcgcacatgtcacagcaaatccagaattcatc 692
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 85.7 bits (43), Expect = 1e-13 Identities = 97/115 (84%) Strand = Plus / Plus Query: 364 tgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttca 423 |||||||| | ||||| ||||| |||||||| ||||| ||| | || ||||||||||||| Sbjct: 42962 tgctgcaagtagggcacttgtaatgcttgatatgctccgctctagctggagtgatcttca 43021 Query: 424 cacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||| |||||||||||| ||||||| ||||| || |||||||||||||| Sbjct: 43022 cacactccccgtggaaccatttctcgcacatgtcacagcaaatccagaattcatc 43076
>gb|BT013375.1| Lycopersicon esculentum clone 135402R, mRNA sequence Length = 1222 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaac 440 ||||| || ||||| ||||||||||| || ||||| ||||||||||| || || |||||| Sbjct: 998 ttgtactgtttgatatgctcagctttagctggagtaatcttcacacattttccatggaac 939 Query: 441 catgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||||||| |||||| || |||||||||||||| Sbjct: 938 catctctcgcaaatatcacagcaaatccagaattcatc 901
>gb|BT013089.1| Lycopersicon esculentum clone 114355R, mRNA sequence Length = 1274 Score = 83.8 bits (42), Expect = 5e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaac 440 ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 890 ttgtattgcttgatatgctcagccttggcaggggtgatcttcacacacttgccgtggaac 831 Query: 441 ca 442 || Sbjct: 830 ca 829
>ref|NM_114147.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G42790 mRNA, complete cds Length = 1072 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 871 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 812 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 811 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 768
>gb|AY114574.1| Arabidopsis thaliana nucleic acid binding protein-like (At3g42790) mRNA, complete cds Length = 865 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 722 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 663 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 662 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 619
>gb|DQ103593.1| Olimarabidopsis pumila clone BAC 44L14, complete sequence Length = 118342 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 74516 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 74575 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||||||||| |||| ||| || || ||||||||||||||||| Sbjct: 74576 tggaaccatttctcacaaaggtcgcagcagatccagaattcatc 74619
>gb|AY062851.1| Arabidopsis thaliana nucleic acid binding protein-like (T21C14.1) mRNA, complete cds Length = 1060 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 861 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 802 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 801 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 758
>emb|BX823497.1|CNS0A6J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 802 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 743 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 742 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 699
>emb|BX823251.1|CNS0A6HZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 305 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 104 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 45 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 44 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 1
>emb|AL138639.1|ATT21C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T21C14 Length = 79677 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || |||||||||||||||||||| || Sbjct: 9636 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacacacttgcca 9695 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 9696 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 9739
>gb|BT009102.1| Triticum aestivum clone wkm2n.pk004.d7:fis, full insert mRNA sequence Length = 1221 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 374 cgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttacc 433 |||||| ||||| |||||||||||||| || ||||| || |||||||| |||||||| || Sbjct: 890 cgggcacttgtactgcttgatgtgctccgccttggccggcgtgatcttgacacacttgcc 831 Query: 434 gtggaaccatgtctcgca 451 ||||||||| ||||||| Sbjct: 830 gtggaaccacttctcgca 813
>ref|NM_126302.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT2G02470 mRNA, complete cds Length = 1322 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 1006 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 947 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 946 cattttccatggaaccatttctcacacgcgtcgcagcaaatccagaactcatc 894
>gb|BT018462.1| Zea mays clone EL01N0414F09.d mRNA sequence Length = 1086 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 387 tgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtc 446 ||||||||||| || ||||| || || |||||||| |||||||| ||||||||||||||| Sbjct: 828 tgcttgatgtggtccgctttagctggggtgatcttaacacacttgccgtggaaccatgtc 769 Query: 447 tcgca 451 ||||| Sbjct: 768 tcgca 764
>gb|AC005312.3| Arabidopsis thaliana chromosome 2 clone T16F16 map CIC11A04, complete sequence Length = 74903 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 70206 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 70147 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 70146 cattttccatggaaccatttctcacacgcgtcgcagcaaatccagaactcatc 70094
>gb|AC004136.3| Arabidopsis thaliana chromosome 2 BAC T8K22 genomic sequence, complete sequence Length = 98957 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 98370 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 98429 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 98430 cattttccatggaaccatttctcacacgcgtcgcagcaaatccagaactcatc 98482
>gb|BT005004.1| Arabidopsis thaliana clone U20654 putative PHD-type zinc finger protein (At2g02470) mRNA, complete cds Length = 802 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 749 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 690 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 689 cattttccatggaaccatttctcacacgcgtcgcagcaaatccagaactcatc 637
>gb|BT003905.1| Arabidopsis thaliana clone RAFL15-12-N24 (R20654) putative PHD-type zinc finger protein (At2g02470) mRNA, complete cds Length = 1185 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 864 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 805 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 804 cattttccatggaaccatttctcacacgcgtcgcagcaaatccagaactcatc 752
>gb|AY087820.1| Arabidopsis thaliana clone 38635 mRNA, complete sequence Length = 1263 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 366 ctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcaca 425 |||||| | ||||||||||| ||||||||||| || ||||| ||||| || ||||||||| Sbjct: 1006 ctgcaagttgggcatttgtaatgcttgatgtgttctgcttttgcaggtgttatcttcaca 947 Query: 426 cacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 || || || ||||||||| |||| || || || || || |||||||| ||||| Sbjct: 946 cattttccatggaaccatttctcacaggcgtcgcagcaaatccagaactcatc 894
>gb|AY108226.1| Zea mays PCO125467 mRNA sequence Length = 597 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 387 tgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtc 446 ||||||||||| || ||||| || || |||||||| |||||||| ||||||||||||||| Sbjct: 312 tgcttgatgtggtccgctttagctggggtgatcttaacacacttgccgtggaaccatgtc 253 Query: 447 tcgca 451 ||||| Sbjct: 252 tcgca 248
>emb|BX824888.1|CNS0A6WN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1038 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| || ||||| ||||||||| | || ||||||||||||||| |||| || Sbjct: 870 gggcacttgtattgtttgatatgctcagctctagctggagtgatcttcacagacttgcca 811 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 |||||||| |||| ||| ||||| ||||||||||||||||| Sbjct: 810 tggaaccacttctcacaaaggtcacagcagatccagaattcatc 767
>emb|BX813692.1|CNS0ADU3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 977 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 414 gtgatcttcacacacttaccgtggaaccatgtctcgcaagcatcacaacagatccagaat 473 ||||||||||| || || || ||||||||| ||||||||||||||||||| ||||| || Sbjct: 872 gtgatcttcacgcatttcccatggaaccatttctcgcaagcatcacaacatatccataac 813 Query: 474 tcatcctgcccatagttatcgttacacgcaccaca 508 ||||| |||||||| ||| |||||||||||| Sbjct: 812 tcatctcctccatagttgtcgccacacgcaccaca 778
>gb|AY111715.1| Zea mays CL12562_1 mRNA sequence Length = 753 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 387 tgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaaccatgtc 446 |||||||||||||| ||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 351 tgcttgatgtgctccgctttatttggggtgatcttgacacacttgccgtggaaccatgtc 410 Query: 447 tcgcaagcatcacaacagatccagaa 472 ||||| || |||||||||||||| Sbjct: 411 tcgcataagtcgcaacagatccagaa 436
>gb|AY104096.1| Zea mays PCO134301 mRNA sequence Length = 674 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 365 gctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcac 424 |||||| | |||||| ||||||||||| ||||| || ||||||||||| |||||| ||| Sbjct: 282 gctgcagtccgggcacttgtagtgctttatgtggtccgctttggcaggggtgatccgcac 223 Query: 425 acacttaccgtggaacca 442 ||||| ||||||||||| Sbjct: 222 gcacttcccgtggaacca 205
>ref|XM_479105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1168 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 790 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 731 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 730 tggaaccacttctcgca 714
>gb|AC079038.3|AC079038 Oryza sativa chromosome 7 clone OSJNBb0024A20, complete sequence Length = 129838 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 125337 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 125396 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 125397 tggaaccacttctcgca 125413
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 24963816 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 24963757 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 24963756 tggaaccacttctcgca 24963740 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 362 gctgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatctt 421 ||||||||||| ||||| ||||||||||| ||||| || ||||| || || || ||| | Sbjct: 7447100 gctgctgcaatcagggcacttgtagtgctttatgtgttccgctttcgctggtgttatcct 7447159 Query: 422 cacacacttaccgtggaacca 442 || || || ||||||||||| Sbjct: 7447160 aacgcatttgccgtggaacca 7447180
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 147448 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 147389 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 147388 tggaaccacttctcgca 147372
>dbj|AP005895.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018L13 Length = 131155 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 4496 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 4437 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 4436 tggaaccacttctcgca 4420
>dbj|AK109447.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H11, full insert sequence Length = 1220 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||| Sbjct: 842 gggcacttgtactgcttgatgtgctccgccttggccggggtgatcttgacgcacttgccg 783 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 782 tggaaccacttctcgca 766
>gb|AY110004.1| Zea mays CL16185_1 mRNA sequence Length = 1230 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 374 cgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttacc 433 |||||| ||||| |||||||||||||| || ||||| | |||||||| || ||||| || Sbjct: 197 cgggcacttgtactgcttgatgtgctcggccttggccgccgtgatcttgacgcacttgcc 256 Query: 434 gtggaaccatgtctcgca 451 ||||||||| ||||||| Sbjct: 257 gtggaaccacttctcgca 274
>ref|NM_120643.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G05610 transcript variant AT5G05610.1 mRNA, complete cds Length = 1228 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 857 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 802
>ref|NM_180444.1| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G05610 transcript variant AT5G05610.2 mRNA, complete cds Length = 1184 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 857 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 802
>gb|BT017746.1| Zea mays clone EL01N0449H05.c mRNA sequence Length = 1198 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaac 440 ||||| |||||||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 855 ttgtactgcttgatgtgctccgccttggcaggggtgatgcggacacacttgccatggaac 796 Query: 441 catgtctcgcaagcatcacaacagatccagaa 472 || ||||||| |||| || ||||||||||| Sbjct: 795 cacttctcgcacacatcgcagcagatccagaa 764
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01, complete sequence Length = 173074 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||| ||||| || Sbjct: 74246 gggcacttgtagtgtttgatatgctcggctcgagcaggtgtgatcttcacgcactttcca 74187 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||| ||||||| ||||||||||||||| || ||||| Sbjct: 74186 tggtaccaccgctcgcaactatcacaacagatccaaaactcatc 74143
>gb|BT024471.1| Arabidopsis thaliana At5g05610 mRNA, complete cds Length = 726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 695 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 640
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||| ||||| || Sbjct: 20402501 gggcacttgtagtgtttgatatgctcggctcgagcaggtgtgatcttcacgcactttcca 20402442 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||| ||||||| ||||||||||||||| || ||||| Sbjct: 20402441 tggtaccaccgctcgcaactatcacaacagatccaaaactcatc 20402398
>gb|AY084560.1| Arabidopsis thaliana clone 111750 mRNA, complete sequence Length = 1228 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 857 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 802
>dbj|AK176806.1| Arabidopsis thaliana mRNA for nucleic acid binding protein-like, complete cds, clone: RAFL25-35-H08 Length = 1068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 843 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 788
>dbj|AK176462.1| Arabidopsis thaliana mRNA for nucleic acid binding protein-like, complete cds, clone: RAFL24-25-C05 Length = 1120 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 830 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 775
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 Length = 57892 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||||||||| ||||||||| ||| |||||||| || || |||||||||||||| Sbjct: 55977 gggcatttgtattgcttgatgctctctgctttggctggtgttatcttcacacactt 56032
>dbj|AK121400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M22, full insert sequence Length = 1114 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||| ||||| || Sbjct: 870 gggcacttgtagtgtttgatatgctcggctcgagcaggtgtgatcttcacgcactttcca 811 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||| ||||||| ||||||||||||||| || ||||| Sbjct: 810 tggtaccaccgctcgcaactatcacaacagatccaaaactcatc 767
>dbj|AK059311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-G08, full insert sequence Length = 2105 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| |||||||| ||||| ||||| ||| ||||| ||||||||||| ||||| || Sbjct: 1788 gggcacttgtagtgtttgatatgctcggctcgagcaggtgtgatcttcacgcactttcca 1729 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaattcatc 478 ||| |||| ||||||| ||||||||||||||| || ||||| Sbjct: 1728 tggtaccaccgctcgcaactatcacaacagatccaaaactcatc 1685
>gb|AY104993.1| Zea mays PCO092577 mRNA sequence Length = 1146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaac 440 ||||| |||||||||||||| || |||||||| ||||| |||||||| || |||||| Sbjct: 831 ttgtactgcttgatgtgctccgccttggcaggggtgatgcggacacacttgccatggaac 772 Query: 441 catgtctcgcaagcatcacaacagatccagaa 472 || ||||||| |||| || ||||||||||| Sbjct: 771 cacttctcgcacacatcgcagcagatccagaa 740
>gb|AY918932.1| Schoenoplectus americanus clone SCAM.02 microsatellite sequence Length = 442 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctc 400 |||||||||||||||||||||||||| Sbjct: 284 gggcatttgtagtgcttgatgtgctc 259
>ref|XM_470117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 817 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 777
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 34039636 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 34039676
>gb|AC174378.9| Medicago truncatula clone mth2-57m5, complete sequence Length = 126476 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 382 tgtagtgcttgatgtgctcagctttggcaggagtgatcttc 422 |||| |||||||| |||||||| | |||||||||||||||| Sbjct: 115886 tgtactgcttgatttgctcagcctgggcaggagtgatcttc 115926
>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence Length = 112733 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||| ||||| || |||||||||||||||||||| || || Sbjct: 82286 gggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcca 82227 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 82226 tggaaccacttctcgca 82210
>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence Length = 121248 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||| ||||| || |||||||||||||||||||| || || Sbjct: 87794 gggcacttgtattgcttgatatgctcggcacgagcaggagtgatcttcacacattttcca 87853 Query: 435 tggaaccatgtctcgca 451 |||||||| ||||||| Sbjct: 87854 tggaaccacttctcgca 87870
>gb|AC150647.13| Medicago truncatula clone mth2-65p21, complete sequence Length = 105458 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 382 tgtagtgcttgatgtgctcagctttggcaggagtgatcttc 422 |||| |||||||| |||||||| | |||||||||||||||| Sbjct: 31919 tgtactgcttgatttgctcagcctgggcaggagtgatcttc 31879
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 34130108 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 34130148
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 3448 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 3488
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 18055 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 18015
>dbj|AK103363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126N11, full insert sequence Length = 1202 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 360 ctgctgctgcaattcgggcatttgtagtgcttgatgtgctc 400 ||||||||||| | ||||| |||||||||||||||||||| Sbjct: 827 ctgctgctgcagtcagggcacttgtagtgcttgatgtgctc 787
>ref|NM_122522.2| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT5G26210 mRNA, complete cds Length = 1488 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 870 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 815
>ref|NM_122521.4| Arabidopsis thaliana binding AT5G26200 mRNA, complete cds Length = 1636 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 1456 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 1511
>gb|AC005965.1| Arabidopsis thaliana BAC T19G15, from chromosome V near 60.5 cM, complete sequence Length = 77036 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 14124 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 14179
>gb|BT024475.1| Arabidopsis thaliana At5g26210 mRNA, complete cds Length = 768 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 737 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 682
>gb|AY087173.1| Arabidopsis thaliana clone 32443 mRNA, complete sequence Length = 1145 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 870 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 815
>gb|AF077407.1|F9D12 Arabidopsis thaliana BAC F9D12 Length = 112253 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacactt 430 ||||| ||||| |||||||||||||||||| | || || || ||||| |||||||| Sbjct: 2877 gggcacttgtattgcttgatgtgctcagctcttgctggtgttatcttaacacactt 2932
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 352 tcttgctactgctgctgcaattc 374 ||||||||||||||||||||||| Sbjct: 94830 tcttgctactgctgctgcaattc 94852
>emb|AL671914.9| Mouse DNA sequence from clone RP23-1A3 on chromosome X, complete sequence Length = 229809 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 taggacaccaagagtccagaaca 99 ||||||||||||||||||||||| Sbjct: 215423 taggacaccaagagtccagaaca 215401
>ref|XM_466276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 845 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 786 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 785 tggaaccacttctcgcagacgtcgcagcagatccagaa 748
>ref|XM_506831.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.22 mRNA Length = 1213 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 857 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 798 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 797 tggaaccacttctcgcagacgtcgcagcagatccagaa 760
>ref|XM_472642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgat 418 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 734 ttgtaatgcttgatgtgctccgccttggcaggggtgat 697
>gb|BT017810.1| Zea mays clone EL01N0507A04.c mRNA sequence Length = 1011 Score = 44.1 bits (22), Expect = 0.47 Identities = 64/78 (82%) Strand = Plus / Minus Query: 365 gctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcac 424 |||||||| ||||| ||||||||||| || || || ||||| || || || ||| |||| Sbjct: 749 gctgcaatcagggcacttgtagtgctttatctgttctgcttttgctggggttatcctcac 690 Query: 425 acacttaccgtggaacca 442 ||| || ||||||||||| Sbjct: 689 acatttgccgtggaacca 672
>ref|XM_983905.1| PREDICTED: Mus musculus zinc finger protein, subfamily 1A, 3 (Aiolos), transcript variant 5 (Zfpn1a3), mRNA Length = 4596 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 1424 gtgttcttctccctcttcttcc 1445
>ref|XM_923704.2| PREDICTED: Mus musculus zinc finger protein, subfamily 1A, 3 (Aiolos), transcript variant 18 (Zfpn1a3), mRNA Length = 4596 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 1424 gtgttcttctccctcttcttcc 1445
>ref|XM_903039.2| PREDICTED: Mus musculus zinc finger protein, subfamily 1A, 3 (Aiolos), transcript variant 6 (Zfpn1a3), mRNA Length = 4596 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 1424 gtgttcttctccctcttcttcc 1445
>dbj|AK038043.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130073M10 product:zinc finger protein, subfamily 1A, 3 (Aiolos), full insert sequence Length = 4362 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 1422 gtgttcttctccctcttcttcc 1443
>dbj|AK041528.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630019G05 product:zinc finger protein, subfamily 1A, 3 (Aiolos), full insert sequence Length = 2207 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 1904 gtgttcttctccctcttcttcc 1925
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgat 418 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 22167151 ttgtaatgcttgatgtgctccgccttggcaggggtgat 22167114
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 21436233 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 21436174 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 21436173 tggaaccacttctcgcagacgtcgcagcagatccagaa 21436136
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 31160 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 31101 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 31100 tggaaccacttctcgcagacgtcgcagcagatccagaa 31063
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 96186 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 96127 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 96126 tggaaccacttctcgcagacgtcgcagcagatccagaa 96089
>dbj|AK105951.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D01, full insert sequence Length = 1196 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 845 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 786 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 785 tggaaccacttctcgcagacgtcgcagcagatccagaa 748
>dbj|AK098960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072K02, full insert sequence Length = 1234 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgat 418 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 912 ttgtaatgcttgatgtgctccgccttggcaggggtgat 875
>dbj|AK073526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L10, full insert sequence Length = 1213 Score = 44.1 bits (22), Expect = 0.47 Identities = 79/98 (80%) Strand = Plus / Minus Query: 375 gggcatttgtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccg 434 ||||| ||||| |||||||||||||| || || ||||| |||||| || ||||| || Sbjct: 857 gggcacttgtactgcttgatgtgctctgccttcgcaggggtgatccgaacgcacttgcca 798 Query: 435 tggaaccatgtctcgcaagcatcacaacagatccagaa 472 |||||||| ||||||| | || || ||||||||||| Sbjct: 797 tggaaccacttctcgcagacgtcgcagcagatccagaa 760
>dbj|AK063657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B10, full insert sequence Length = 1249 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgat 418 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 928 ttgtaatgcttgatgtgctccgccttggcaggggtgat 891
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Minus Query: 381 ttgtagtgcttgatgtgctcagctttggcaggagtgat 418 ||||| |||||||||||||| || |||||||| ||||| Sbjct: 37012 ttgtaatgcttgatgtgctccgccttggcaggggtgat 36975
>emb|BX465855.15| Zebrafish DNA sequence from clone CH211-235D8 in linkage group 13, complete sequence Length = 41543 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 tttcgtgttcttctccctcttc 538 |||||||||||||||||||||| Sbjct: 9929 tttcgtgttcttctccctcttc 9950
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcc 542 |||||||||||||||||||||| Sbjct: 28497 gtgttcttctccctcttcttcc 28518
>ref|XM_512811.1| PREDICTED: Pan troglodytes similar to transient receptor potential cation channel, subfamily M, member 4 (LOC456197), mRNA Length = 2289 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 666 cgtgttcttcttcctcttcttcctc 690
>ref|NM_186688.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Minus Query: 362 gctgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatctt 421 ||||||||||| ||||| ||||||||||| ||||| || ||||| || || || ||| | Sbjct: 786 gctgctgcaatcagggcacttgtagtgctttatgtgttccgctttcgctggtgttatcct 727 Query: 422 cacacacttaccgtggaacca 442 || || || ||||||||||| Sbjct: 726 aacgcatttgccgtggaacca 706
>gb|AC153607.15| Mus musculus 6 BAC RP23-100I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 43135 ttcttctccctcttcttcctc 43155
>gb|AE000665.1|MMAE000665 Mus musculus TCR beta locus from bases 501860 to 700960 (section 3 of 3) of the complete sequence Length = 199101 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 130253 ttcttctccctcttcttcctc 130233
>gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome 17, complete sequence Length = 229599 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 115248 ttcttctccctcttcttcctc 115228
>gb|AC113987.11| Mus musculus chromosome 9, clone RP24-106M14, complete sequence Length = 170828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 99383 ttcttctccctcttcttcctc 99403
>gb|DQ160134.1| Taraxacum officinale TO114-1 (To114-1) mRNA, partial cds Length = 201 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 398 ctcagctttggcaggagtgatcttcacacactt 430 ||||||||| ||||| ||||| ||||||||||| Sbjct: 194 ctcagcttttgcaggtgtgattttcacacactt 162
>gb|AC114010.6| Mus musculus BAC clone RP24-378K23 from chromosome 12, complete sequence Length = 175670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 agagtccagaacagggcactg 107 ||||||||||||||||||||| Sbjct: 164026 agagtccagaacagggcactg 164006
>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence Length = 204437 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 32326 ttcttctccctcttcttcctc 32306
>gb|AC124384.4| Mus musculus BAC clone RP24-413G2 from chromosome 12, complete sequence Length = 183707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 128135 ttcttctccctcttcttcctc 128115
>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence Length = 214654 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 agagtccagaacagggcactg 107 ||||||||||||||||||||| Sbjct: 77961 agagtccagaacagggcactg 77941
>ref|XM_541500.2| PREDICTED: Canis familiaris similar to transient receptor potential cation channel, subfamily M, member 4 (LOC484385), mRNA Length = 3804 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2781 cgtgttcttcttcctcttcttcctc 2805
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 148073 ttcttctccctcttcttcctc 148053
>emb|Z83307.1|HSA1280 Human DNA sequence from clone XX-A1280 on chromosome 11, complete sequence Length = 22253 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 1304 ttcttctccctcttcttcctc 1324
>emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on chromosome 1 Contains part of the PBX1 gene for pre-B-cell leukemia transcription factor 1, complete sequence Length = 196730 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 taatgccttttcgtgttcttctccc 533 |||||||||||| |||||||||||| Sbjct: 71939 taatgccttttcatgttcttctccc 71915
>emb|AL355603.17| Human DNA sequence from clone RP11-394M3 on chromosome 13 Contains the 5' end of a novel gene (KIAA1165) (likely ortholog of mouse Nedd4 WW domain-binding protein 5A), a novel gene and a CpG island, complete sequence Length = 101771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 10596 ttcttctccctcttcttcctc 10576
>gb|AY297046.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant C (TRPM4) mRNA, complete cds; alternatively spliced Length = 3444 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2404 cgtgttcttcttcctcttcttcctc 2428
>gb|AY297045.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant B (TRPM4) mRNA, complete cds; alternatively spliced Length = 3879 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2839 cgtgttcttcttcctcttcttcctc 2863
>gb|AY297044.1| Homo sapiens transient receptor potential cation channel subfamily M member 4 splice variant A (TRPM4) mRNA, complete cds; alternatively spliced Length = 3523 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2483 cgtgttcttcttcctcttcttcctc 2507
>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA sequence Length = 1300 Score = 42.1 bits (21), Expect = 1.9 Identities = 57/69 (82%) Strand = Plus / Minus Query: 383 gtagtgcttgatgtgctcagctttggcaggagtgatcttcacacacttaccgtggaacca 442 |||||||||||||||||| || ||| || |||||||| || ||||| |||||| |||| Sbjct: 841 gtagtgcttgatgtgctccgcccgggcgggcgtgatcttgacgcacttgccgtggtacca 782 Query: 443 tgtctcgca 451 ||||||| Sbjct: 781 cttctcgca 773
>ref|NM_017636.2| Homo sapiens transient receptor potential cation channel, subfamily M, member 4 (TRPM4), mRNA Length = 4061 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2859 cgtgttcttcttcctcttcttcctc 2883
>gb|AC153854.7| Mus musculus 10 BAC RP23-203H5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 164893 ttcttctccctcttcttcctc 164873
>gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, complete sequence Length = 115289 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 62871 ttcttctccctcttcttcctc 62851
>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence Length = 117628 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 63329 cgtgttcttcttcctcttcttcctc 63305
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 190161 ttcttctccctcttcttcctc 190141
>dbj|AK094249.1| Homo sapiens cDNA FLJ36930 fis, clone BRACE2005251, highly similar to PAIRED BOX PROTEIN PAX-6 Length = 2843 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 1138 ttcttctccctcttcttcctc 1158
>dbj|AK094172.1| Homo sapiens cDNA FLJ36853 fis, clone ASTRO2014498, highly similar to PAIRED BOX PROTEIN PAX-6 Length = 2460 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 424 ttcttctccctcttcttcctc 444
>gb|AF497623.1| Homo sapiens cation channel TRPM4B (TRPM4B) mRNA, complete cds Length = 4061 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2859 cgtgttcttcttcctcttcttcctc 2883
>gb|AY046396.1| Homo sapiens TRP-related cation influx channel (TRPM4) mRNA, complete cds Length = 3701 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2487 cgtgttcttcttcctcttcttcctc 2511
>gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome 9, complete sequence Length = 177728 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 120423 ttcttctccctcttcttcctc 120403
>gb|AC010903.8| Homo sapiens BAC clone RP11-550H9 from 2, complete sequence Length = 91723 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 32489 ttcttctccctcttcttcctc 32469
>gb|AC073081.5| Homo sapiens BAC clone RP11-310H21 from 2, complete sequence Length = 118001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ccctcttgctactgctgctgc 369 ||||||||||||||||||||| Sbjct: 21792 ccctcttgctactgctgctgc 21812
>emb|AJ575813.1|HSA575813 Homo sapiens mRNA for transient receptor potential ion channel melastatin subgroup member 4 protein (TRPM4 gene) Length = 4042 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2828 cgtgttcttcttcctcttcttcctc 2852
>dbj|AK000048.1| Homo sapiens cDNA FLJ20041 fis, clone COL00423 Length = 3810 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 2588 cgtgttcttcttcctcttcttcctc 2612
>dbj|AK000235.1| Homo sapiens cDNA FLJ20228 fis, clone COLF5163 Length = 2981 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 cgtgttcttctccctcttcttcctc 544 ||||||||||| ||||||||||||| Sbjct: 1751 cgtgttcttcttcctcttcttcctc 1775
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0061L20 Length = 138926 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 362 gctgctgcaattcgggcatttgtagtgcttgatgtgctcagcttt 406 ||||||||||| ||||| ||||||||||| ||||| || ||||| Sbjct: 25414 gctgctgcaatcagggcacttgtagtgctttatgtgttccgcttt 25458
>gb|U95739.1|HSU95739 Human chromosome 16p11.2-p12 BAC clone CIT987SK-224D6 complete sequence Length = 69015 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 5405 ttcttctccctcttcttcctc 5385
>gb|AC155269.2| Mus musculus BAC clone RP23-215E17 from 12, complete sequence Length = 198927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 agagtccagaacagggcactg 107 ||||||||||||||||||||| Sbjct: 88 agagtccagaacagggcactg 68
>dbj|AK073637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048B22, full insert sequence Length = 1155 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Minus Query: 362 gctgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatctt 421 ||||||||||| ||||| ||||||||||| ||||| || ||||| || || || ||| | Sbjct: 786 gctgctgcaatcagggcacttgtagtgctttatgtgttccgctttcgctggtgttatcct 727 Query: 422 cacacacttaccgtggaacca 442 || || || ||||||||||| Sbjct: 726 aacgcatttgccgtggaacca 706
>dbj|AK063803.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F12, full insert sequence Length = 591 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Minus Query: 362 gctgctgcaattcgggcatttgtagtgcttgatgtgctcagctttggcaggagtgatctt 421 ||||||||||| ||||| ||||||||||| ||||| || ||||| || || || ||| | Sbjct: 222 gctgctgcaatcagggcacttgtagtgctttatgtgttccgctttcgctggtgttatcct 163 Query: 422 cacacacttaccgtggaacca 442 || || || ||||||||||| Sbjct: 162 aacgcatttgccgtggaacca 142
>gb|AC134529.6| Mus musculus BAC clone RP24-503A2 from chromosome 6, complete sequence Length = 166392 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 15837 ttcttctccctcttcttcctc 15817
>dbj|AB209177.1| Homo sapiens mRNA for paired box gene 6 isoform a variant protein Length = 6174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 3915 ttcttctccctcttcttcctc 3935
>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete sequence Length = 221374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcctc 544 ||||||||||||||||||||| Sbjct: 207078 ttcttctccctcttcttcctc 207098
>gb|AC153581.18| Mus musculus 6 BAC RP23-111F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208262 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 152236 ttcttctccctcttcttcct 152255
>gb|AC158918.7| Mus musculus chromosome 15, clone RP23-106N12, complete sequence Length = 209747 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ctttacagtaagtcaaattc 300 |||||||||||||||||||| Sbjct: 158233 ctttacagtaagtcaaattc 158214
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 221760 tcttctccctcttcttcctc 221779
>ref|XM_592254.2| PREDICTED: Bos taurus similar to transient receptor potential cation channel, subfamily M, member 4 (LOC514408), mRNA Length = 2194 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 gtgttcttctccctcttcttcctc 544 |||||||||| ||||||||||||| Sbjct: 994 gtgttcttcttcctcttcttcctc 1017
>gb|AC100986.9| Mus musculus chromosome 3, clone RP23-77E5, complete sequence Length = 112141 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 32944 tcttctccctcttcttcctc 32925
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 80548 tcttctccctcttcttcctc 80567
>gb|AC147992.3| Mus musculus BAC clone RP24-384K8 from chromosome 18, complete sequence Length = 239075 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 221663 tcttctccctcttcttcctc 221682
>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence Length = 203436 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 512 tgccttttcgtgttcttctccctcttcttcct 543 ||||||||| | |||||| ||||||||||||| Sbjct: 73981 tgccttttcttcttcttccccctcttcttcct 74012
>gb|AC147367.3| Mus musculus BAC clone RP24-424M5 from chromosome 18, complete sequence Length = 175316 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 1456 tcttctccctcttcttcctc 1475
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 62344 tcttctccctcttcttcctc 62325
>gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosome 3, complete sequence Length = 198637 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 36111 tcttctccctcttcttcctc 36130
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 8111 ttcttctccctcttcttcct 8130
>ref|XR_003570.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC671784), mRNA Length = 634 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 597 tcttctccctcttcttcctc 578
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 125987 tcttctccctcttcttcctc 126006
>gb|AC102125.13| Mus musculus chromosome 6, clone RP23-190E16, complete sequence Length = 219870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cttgctactgctgctgcaat 372 |||||||||||||||||||| Sbjct: 14702 cttgctactgctgctgcaat 14683
>gb|DQ483426.1| Gymnogyps californianus clone 129H microsatellite sequence Length = 991 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 494 tcttctccctcttcttcctc 513
>gb|AC124432.5| Mus musculus BAC clone RP24-243L15 from chromosome 18, complete sequence Length = 160728 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 19854 tcttctccctcttcttcctc 19835
>gb|AC125352.4| Mus musculus BAC clone RP23-451M13 from chromosome 8, complete sequence Length = 203416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 75153 tcttctccctcttcttcctc 75172
>gb|AC121862.3| Mus musculus BAC clone RP24-110E10 from chromosome 14, complete sequence Length = 178501 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 36131 ttcttctccctcttcttcct 36112
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 96470 tcttctccctcttcttcctc 96451
>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence Length = 233499 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 75257 tcttctccctcttcttcctc 75238
>gb|BC090518.1| Danio rerio DnaJ homolog subfamily C member 1-like, mRNA (cDNA clone IMAGE:7142708), partial cds Length = 935 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 641 ttcttctccctcttcttcct 622
>gb|AC156564.3| Mus musculus BAC clone RP24-81G20 from chromosome 8, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 63079 tcttctccctcttcttcctc 63098
>gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, complete sequence Length = 181487 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 158691 tcttctccctcttcttcctc 158672
>emb|AL596217.6| Human DNA sequence from clone RP11-13J14 on chromosome 1 Contains a CpG island, complete sequence Length = 183774 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 90700 ttcttctccctcttcttcct 90681
>emb|AL589166.6| Human DNA sequence from clone RP11-108E7 on chromosome 10, complete sequence Length = 53620 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 agaacagggcactgacaagg 113 |||||||||||||||||||| Sbjct: 15206 agaacagggcactgacaagg 15225
>emb|AL391499.11| Human DNA sequence from clone RP11-162E8 on chromosome 10 Contains part of a novel gene (DKFZp761L0424) (KIAA1217), complete sequence Length = 144750 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 acaacacagcaagaccccta 212 |||||||||||||||||||| Sbjct: 46765 acaacacagcaagaccccta 46746
>gb|AC092853.18| Mus musculus strain 129/SvJ clone mgs1-271d8 map X, complete sequence Length = 203118 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 64655 tcttctccctcttcttcctc 64636
>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 201133 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 158007 ttcttctccctcttcttcct 158026
>emb|AL606829.13| Mouse DNA sequence from clone RP23-10M12 on chromosome 11 Contains a novel gene (MOR280-1) similar to the olfactory receptor family, a novel gene (D330012D11Rik), the Zfp62 gene for zinc finger protein 62, the Mgat1 gene for mannoside acetylglucosaminyltransferase 1, a novel gene (MOR256-24) similar to the olfactory receptor family, a novel gene (MOR256-25) similar to the olfactory receptor family, a novel gene (LOC216715) similar to the olfactory receptor MOR256 family, a novel gene (MOR256-27) similar to the olfactory receptor family, a novel gene (MOR256-2) similar to the olfactory receptor family and three CpG islands, complete sequence Length = 203286 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 178763 tcttctccctcttcttcctc 178782
>emb|CR388093.11| Zebrafish DNA sequence from clone CH211-279L9 in linkage group 2, complete sequence Length = 153673 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 7093 ttcttctccctcttcttcct 7112
>emb|AL929566.30| Zebrafish DNA sequence from clone CH211-159C13 in linkage group 8, complete sequence Length = 137166 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aatctcaaagcaacaactga 243 |||||||||||||||||||| Sbjct: 21248 aatctcaaagcaacaactga 21267
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgttcttctccctcttcttc 541 |||||||||||||||||||| Sbjct: 84919 tgttcttctccctcttcttc 84938
>gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, complete sequence Length = 156559 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 94402 tcttctccctcttcttcctc 94421
>gb|AC094023.1| Homo sapiens chromosome 1 clone RP4-738H2, complete sequence Length = 122685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 103230 ttcttctccctcttcttcct 103211
>dbj|AK023731.1| Homo sapiens cDNA FLJ13669 fis, clone PLACE1011719 Length = 1791 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctccctcttcttcct 543 |||||||||||||||||||| Sbjct: 1546 ttcttctccctcttcttcct 1527
>ref|NM_080306.2| Drosophila melanogaster pecanex CG3443-RB (pcx), mRNA Length = 11763 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 4981 tggccctcttgctactgctg 4962
>gb|AC008629.7| Homo sapiens chromosome 5 clone CTB-161M19, complete sequence Length = 151881 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acaacacagcaagaccccta 212 |||||||||||||||||||| Sbjct: 45826 acaacacagcaagaccccta 45845
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 63841 tggccctcttgctactgctg 63822
>ref|XM_681505.1| PREDICTED: Danio rerio similar to Short transient receptor potential channel 4 (TrpC4) (Trp4) (Capacitative calcium entry channel 1) (CCE1) (LOC558305), mRNA Length = 597 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 agagcatcaccgacatacac 186 |||||||||||||||||||| Sbjct: 299 agagcatcaccgacatacac 280
>gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, complete sequence Length = 168624 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgttcttctccctcttcttc 541 |||||||||||||||||||| Sbjct: 109537 tgttcttctccctcttcttc 109556
>gb|AC011603.37| Homo sapiens 12 BAC RP11-386G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174400 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acaacacagcaagaccccta 212 |||||||||||||||||||| Sbjct: 4476 acaacacagcaagaccccta 4495
>gb|AF463770.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence Length = 56726 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 16871 tcttctccctcttcttcctc 16890
>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete sequence Length = 229553 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 94959 tcttctccctcttcttcctc 94940
>gb|AC151576.2| Mus musculus BAC clone RP24-260K24 from 8, complete sequence Length = 162663 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 104396 tcttctccctcttcttcctc 104415
>gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, complete sequence Length = 169610 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 39438 tcttctccctcttcttcctc 39419
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 164582 tggccctcttgctactgctg 164563
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gcaggagtgatcttcacaca 427 |||||||||||||||||||| Sbjct: 441803 gcaggagtgatcttcacaca 441822
>emb|AL928581.8| Mouse DNA sequence from clone RP23-318H20 on chromosome 2, complete sequence Length = 178735 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 64091 tcttctccctcttcttcctc 64110
>gb|AC153565.5| Mus musculus 10 BAC RP23-228H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 33681 tcttctccctcttcttcctc 33662
>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228194 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 217266 tcttctccctcttcttcctc 217247
>gb|AC124491.5| Mus musculus BAC clone RP23-454B2 from chromosome 8, complete sequence Length = 187779 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 179575 tcttctccctcttcttcctc 179594
>emb|AL669920.15| Mouse DNA sequence from clone RP23-263C23 on chromosome 11, complete sequence Length = 216776 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 186733 tcttctccctcttcttcctc 186752
>gb|AC147085.3| Mus musculus BAC clone RP23-356J12 from 8, complete sequence Length = 209306 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 108219 tcttctccctcttcttcctc 108238
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 111393 tcttctccctcttcttcctc 111412
>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete sequence Length = 148047 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 136806 tcttctccctcttcttcctc 136825
>emb|AL928567.6| Mouse DNA sequence from clone RP23-296K20 on chromosome 11, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 23633 tcttctccctcttcttcctc 23652
>emb|AL844867.3| Mouse DNA sequence from clone RP23-17B8 on chromosome X, complete sequence Length = 175256 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 147962 tcttctccctcttcttcctc 147981
>emb|AL009195.1|DMC30B8 Drosophila melanogaster cosmid clone 30B8 Length = 38125 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 7655 tggccctcttgctactgctg 7636
>gb|M25662.1|DROPEC D.melanogaster pecanex gene, exons 1 (partial) and 2 Length = 8951 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 1984 tggccctcttgctactgctg 1965
>gb|M74329.1|DROPCXGEN Drosophilia melanogaster pcx gene, 5' end Length = 17254 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tggccctcttgctactgctg 365 |||||||||||||||||||| Sbjct: 10287 tggccctcttgctactgctg 10268
>emb|AL627432.26| Mouse DNA sequence from clone RP23-45I5 on chromosome X, complete sequence Length = 127007 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgttcttctccctcttcttc 541 |||||||||||||||||||| Sbjct: 106212 tgttcttctccctcttcttc 106231
>emb|AL713983.9| Mouse DNA sequence from clone RP23-244C21 on chromosome X, complete sequence Length = 148335 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 tcttctccctcttcttcctc 544 |||||||||||||||||||| Sbjct: 95722 tcttctccctcttcttcctc 95703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,492,455 Number of Sequences: 3902068 Number of extensions: 4492455 Number of successful extensions: 110401 Number of sequences better than 10.0: 207 Number of HSP's better than 10.0 without gapping: 207 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109705 Number of HSP's gapped (non-prelim): 680 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
