>ref|NM_197188.1| Oryza sativa (japonica cultivar-group) putative glycine-rich protein
            (OSJNBa0078O01.2), mRNA
          Length = 3876

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 418  actttcacccatgacccaccacacattggacatgcttgggtcca 461
            ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 3869 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 3826

>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 418   actttcacccatgacccaccacacattggacatgcttgggtcca 461
             ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 12035 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 11992

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 418      actttcacccatgacccaccacacattggacatgcttgggtcca 461
                ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 18509024 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 18508981

>dbj|AK102105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084D07, full
            insert sequence
          Length = 2637

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 418  actttcacccatgacccaccacacattggacatgcttgggtcca 461
            ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 2264 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 2221

>dbj|AK101061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022G24, full
            insert sequence
          Length = 4540

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 418  actttcacccatgacccaccacacattggacatgcttgggtcca 461
            ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 4167 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 4124

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 418      actttcacccatgacccaccacacattggacatgcttgggtcca 461
                ||||||||||||| |||||| |||||||| || || ||||||||
Sbjct: 18519077 actttcacccatgtcccaccgcacattgggcaagcatgggtcca 18519034

>ref|NM_017360.1| Rattus norvegicus coilin (Coil), mRNA
          Length = 2580

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 262 aagccaaagcgctggggcatgagactgatga 292
           ||||||||||||||| | |||||||||||||
Sbjct: 152 aagccaaagcgctggcggatgagactgatga 122

>gb|AF399643.1|AF399643 Rattus norvegicus p80 coilin mRNA, complete cds
          Length = 2580

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 262 aagccaaagcgctggggcatgagactgatga 292
           ||||||||||||||| | |||||||||||||
Sbjct: 152 aagccaaagcgctggcggatgagactgatga 122

>gb|AF220424.1|AF220424 Rattus norvegicus coilin p80 mRNA, partial cds
          Length = 1324

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 262 aagccaaagcgctggggcatgagactgatga 292
           ||||||||||||||| | |||||||||||||
Sbjct: 152 aagccaaagcgctggcggatgagactgatga 122

>dbj|AK141731.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030046N05 product:mitochondrial
            ribosomal protein L13, full insert sequence
          Length = 6011

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 97   gcaatatgtgtatctaacagct 118
            ||||||||||||||||||||||
Sbjct: 2561 gcaatatgtgtatctaacagct 2582

>emb|BX005044.9| Zebrafish DNA sequence from clone DKEY-7L6 in linkage group 2, complete
             sequence
          Length = 174623

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 23    atagctgaactacctaaagatg 44
             ||||||||||||||||||||||
Sbjct: 63803 atagctgaactacctaaagatg 63824

>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence
          Length = 170303

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 97     gcaatatgtgtatctaacagct 118
              ||||||||||||||||||||||
Sbjct: 125966 gcaatatgtgtatctaacagct 125987

>gb|AC008661.6| Homo sapiens chromosome 5 clone CTB-28J9, complete sequence
          Length = 188548

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 350   tggccaagcagcaactactat 370
             |||||||||||||||||||||
Sbjct: 89919 tggccaagcagcaactactat 89899

>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18,
             complete sequence
          Length = 164748

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    aaaatagctgaactacctaaa 40
             |||||||||||||||||||||
Sbjct: 66150 aaaatagctgaactacctaaa 66130

>gb|U23169.2| Caenorhabditis elegans cosmid C29H12, complete sequence
          Length = 46535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gagtttatttttataaaata 25
             ||||||||||||||||||||
Sbjct: 26641 gagtttatttttataaaata 26622

>ref|NM_206827.1| Homo sapiens RAS-like, family 11, member A (RASL11A), mRNA
          Length = 1543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    cagagtttatttttataaaa 23
            ||||||||||||||||||||
Sbjct: 1431 cagagtttatttttataaaa 1450

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    aactactatagaagaattag 381
              ||||||||||||||||||||
Sbjct: 800081 aactactatagaagaattag 800100

>gb|AY439004.1| Homo sapiens Ras-like family 11 member A (RASL11A) mRNA, complete cds
          Length = 1543

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    cagagtttatttttataaaa 23
            ||||||||||||||||||||
Sbjct: 1431 cagagtttatttttataaaa 1450

>emb|CR954286.2|RP43001A02 Pan troglodytes chromosome X BAC RP43-001A02, complete sequence
          Length = 186572

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     gtttatttttataaaatagc 27
             ||||||||||||||||||||
Sbjct: 76413 gtttatttttataaaatagc 76432

>emb|AL161894.12| Human DNA sequence from clone RP11-23B16 on chromosome 13, complete
             sequence
          Length = 106083

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   attgtgatacatttatacac 148
             ||||||||||||||||||||
Sbjct: 49912 attgtgatacatttatacac 49893

>emb|AL159977.10| Human DNA sequence from clone RP11-428O18 on chromosome 13 Contains the
              RPL21 gene for ribosomal protein L21 (60S ribosomal protein
              L21, L21), a novel gene for a Ras family protein similar to
              1110065D03RIK, a novel gene, the 5' end of novel gene and
              two CpG islands, complete sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      cagagtttatttttataaaa 23
              ||||||||||||||||||||
Sbjct: 100344 cagagtttatttttataaaa 100363

>emb|AL139425.8| Human DNA sequence from clone RP4-788L13 on chromosome 1p21.1-21.3
             Contains the 3' end of gene for plasticity related gene 1
             (PRG), complete sequence
          Length = 68858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 423   cacccatgacccaccacacattgg 446
             |||||||||| |||||||||||||
Sbjct: 64440 cacccatgacacaccacacattgg 64463

>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome;
            segment 7/17
          Length = 348813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 207  agccgttagagccaagtctcagtatctgcttt 238
            ||||| ||||||||||| || |||||||||||
Sbjct: 5574 agccgatagagccaagtatccgtatctgcttt 5605

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     agcatggtgaagtggtcacg 399
               ||||||||||||||||||||
Sbjct: 2419289 agcatggtgaagtggtcacg 2419270

>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     aactacctaaagatgagggg 49
              ||||||||||||||||||||
Sbjct: 789289 aactacctaaagatgagggg 789308

>gb|AC079864.22| Homo sapiens Xp BAC RP11-662G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161874

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     gtttatttttataaaatagc 27
             ||||||||||||||||||||
Sbjct: 20564 gtttatttttataaaatagc 20583

>gb|AC025460.7| Homo sapiens chromosome 5 clone CTD-2235E24, complete sequence
          Length = 214636

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atagaagaattagcatggtg 388
              ||||||||||||||||||||
Sbjct: 157940 atagaagaattagcatggtg 157959

>gb|AE008502.1|AE008502 Streptococcus pneumoniae R6 section 118 of 184 of the complete genome
          Length = 10852

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   caaaattatccaacatggta 327
             ||||||||||||||||||||
Sbjct: 10604 caaaattatccaacatggta 10623

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 164      tgcaaacattgccatctccc 183
                ||||||||||||||||||||
Sbjct: 38733224 tgcaaacattgccatctccc 38733205

>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1078G07
          Length = 199457

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  tgcaaacattgccatctccc 183
            ||||||||||||||||||||
Sbjct: 6106 tgcaaacattgccatctccc 6087

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 308     caaaattatccaacatggta 327
               ||||||||||||||||||||
Sbjct: 1382837 caaaattatccaacatggta 1382856

>gb|AF214529.1|AF214528S2 Homo sapiens dystrophin (DMD) gene, intron 51, partial sequence
          Length = 19340

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    gtttatttttataaaatagc 27
            ||||||||||||||||||||
Sbjct: 6817 gtttatttttataaaatagc 6798

>gb|AF014458.2|AF014458 Streptococcus pneumoniae NADH oxidase gene, complete cds
          Length = 1380

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 caaaattatccaacatggta 327
           ||||||||||||||||||||
Sbjct: 73  caaaattatccaacatggta 54

>gb|AY111813.1| Zea mays CL37291_1 mRNA sequence
          Length = 673

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 404 acagcgatcacacaactttcacccatga 431
           |||||| ||| |||||||||||||||||
Sbjct: 350 acagcgctcaaacaactttcacccatga 377

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   tttatttttataaaatagct 28
           ||||||||||||||||||||
Sbjct: 517 tttatttttataaaatagct 536

>emb|CT485784.2| RP43-026J01, complete sequence
          Length = 201375

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      gtttatttttataaaatagc 27
              ||||||||||||||||||||
Sbjct: 184717 gtttatttttataaaatagc 184736

>emb|AL954333.7| Zebrafish DNA sequence from clone CH211-287M15, complete sequence
          Length = 160851

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    tattactatacttttacata 207
              ||||||||||||||||||||
Sbjct: 113710 tattactatacttttacata 113729


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,859,440
Number of Sequences: 3902068
Number of extensions: 4859440
Number of successful extensions: 101231
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100999
Number of HSP's gapped (non-prelim): 232
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)