ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61j11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164396.1| Hordeum vulgare HvMS mRNA for methionine synthase, complete cds Length = 2558 Score = 900 bits (454), Expect = 0.0 Identities = 472/477 (98%), Gaps = 1/477 (0%) Strand = Plus / Minus Query: 1 acacagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2528 acacagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaag 2469 Query: 61 ccaccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2468 ccaccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaag 2409 Query: 121 tggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2408 tggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctc 2349 Query: 181 cttgcaattaaaagggggg-agagctgctatacgagcacggcttactgcgccttggcgag 239 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 2348 cttgcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttggcgag 2289 Query: 240 ctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacctcggc 299 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2288 ctcggcgcggatctgcttggcggcctcgaccatgttggtgagggcgggcttgacctcggc 2229 Query: 300 gtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcac 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2228 gtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcac 2169 Query: 360 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2168 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 2109 Query: 420 gatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaagac 476 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2108 gatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctcgcggaagac 2052
>emb|AM039904.1| Hordeum vulgare mRNA for methionine synthase 1 enzyme (ms1 gene) Length = 2642 Score = 884 bits (446), Expect = 0.0 Identities = 470/477 (98%), Gaps = 1/477 (0%) Strand = Plus / Minus Query: 1 acacagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2573 acacagatgaacaattcgccactcaagtttacaatacacactgacaaccgcctcaaaaag 2514 Query: 61 ccaccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2513 ccaccgaatcaagggatgagcacatcctgccgagaaacaactaccctaataaccaacaag 2454 Query: 121 tggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2453 tggacacgaggtccagattattcaaagtaaaacgccggccatggcaacggtgacatcctc 2394 Query: 181 cttgcaattaaaagggggg-agagctgctatacgagcacggcttactgcgccttggcgag 239 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 2393 cttgcaattaaaagggggggagagctgctatacgagcactgcttactgcgccttggcgag 2334 Query: 240 ctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacctcggc 299 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2333 ctcggcgcggatttgcttggcggcctcgaccatgttggtgagggcgggcttgacctcggc 2274 Query: 300 gtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcac 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2273 gtacttgcgggtcttgagaccgcagtcggggttcacccagaggatgttggtgtcgagcac 2214 Query: 360 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2213 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 2154 Query: 420 gatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaagac 476 ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 2153 gatgtcgtacacgcccgggccaatgccggcaccgtacaccacaccctcgcggaagac 2097
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 26684320 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26684261 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 26684260 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26684201 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 26684200 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 26684141 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 26684140 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 26684081 Query: 473 agac 476 |||| Sbjct: 26684080 agac 26684077 Score = 291 bits (147), Expect = 1e-75 Identities = 218/242 (90%) Strand = Plus / Minus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 26696168 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26696109 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 26696108 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26696049 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 26696048 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 26695989 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 26695988 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 26695929 Query: 475 ac 476 || Sbjct: 26695928 ac 26695927
>dbj|AK099069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163D13, full insert sequence Length = 2640 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 2357 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2298 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2297 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2238 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2237 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2178 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 2177 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 2118 Query: 473 agac 476 |||| Sbjct: 2117 agac 2114
>dbj|AK067958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E22, full insert sequence Length = 2058 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 1724 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 1665 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1664 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 1605 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 1604 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 1545 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 1544 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 1485 Query: 473 agac 476 |||| Sbjct: 1484 agac 1481
>dbj|AK065255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J12, full insert sequence Length = 2668 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 2356 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2297 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2296 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2237 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2236 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2177 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 2176 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 2117 Query: 473 agac 476 |||| Sbjct: 2116 agac 2113
>dbj|AK062198.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-G02, full insert sequence Length = 1064 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 781 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 722 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 721 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 662 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 661 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctatggacgggatccttg 602 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 601 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 542 Query: 473 agac 476 |||| Sbjct: 541 agac 538
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 26612489 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 26612430 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 26612429 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 26612370 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 26612369 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 26612310 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 26612309 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 26612250 Query: 473 agac 476 |||| Sbjct: 26612249 agac 26612246 Score = 291 bits (147), Expect = 1e-75 Identities = 218/242 (90%) Strand = Plus / Minus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 26624337 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 26624278 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 26624277 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 26624218 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 26624217 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 26624158 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 26624157 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 26624098 Query: 475 ac 476 || Sbjct: 26624097 ac 26624096
>emb|BX072547.2|CNS09S4Q Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0090N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 8623 Score = 295 bits (149), Expect = 7e-77 Identities = 220/244 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 2904 tggcgagctgggtgcggatgagcttggcggccgaaaccatgttggtaagggcgggcttga 2845 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2844 cctcgttgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgt 2785 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| | Sbjct: 2784 cgagcaccgcgagcatcttgttgacgcggtccgcaatctcctctgtggacgggatccttg 2725 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 ||||||||||||| || || || ||||||||||||||||| ||| |||||||| ||||| Sbjct: 2724 gggagtggatgtcatagacaccagggccaatgccagcaccatacttcacaccctcgcgga 2665 Query: 473 agac 476 |||| Sbjct: 2664 agac 2661
>dbj|AK067726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O11, full insert sequence Length = 2783 Score = 291 bits (147), Expect = 1e-75 Identities = 218/242 (90%) Strand = Plus / Minus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 2474 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2415 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2414 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2355 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 2354 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 2295 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 2294 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 2235 Query: 475 ac 476 || Sbjct: 2234 ac 2233
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 291 bits (147), Expect = 1e-75 Identities = 218/242 (90%) Strand = Plus / Plus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 74959 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 75018 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 75019 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 75078 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 75079 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 75138 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 75139 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 75198 Query: 475 ac 476 || Sbjct: 75199 ac 75200
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 291 bits (147), Expect = 1e-75 Identities = 218/242 (90%) Strand = Plus / Plus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 102810 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 102869 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 |||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 102870 tcggtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 102929 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 102930 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 102989 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 102990 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 103049 Query: 475 ac 476 || Sbjct: 103050 ac 103051
>emb|AM039905.1| Hordeum vulgare mRNA for methionine synthase 2 enzyme (ms2 gene) Length = 2675 Score = 287 bits (145), Expect = 2e-74 Identities = 219/244 (89%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||| || | |||||||| || ||||||||||| | Sbjct: 2373 tggcgagctgggtgcggatgagcttggccgcagcgaccatgttagtcagggcgggcttca 2314 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2313 cctcggtgtacttgcgggtcttgaggccgcagtcagggttcacccagaggatgttggtgt 2254 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 ||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 2253 cgagcaccgcgagcatcttgttgacgcggtcggcaatctcctccgtggaggggatcctgg 2194 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcgga 472 |||||||||||||||| ||||| ||||||||||| || ||||| ||| |||| ||||| Sbjct: 2193 gggagtggatgtcgtagacgccggggccaatgccggccccgtaggtcacgccctcgcgga 2134 Query: 473 agac 476 |||| Sbjct: 2133 agac 2130
>dbj|AK067757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H17, full insert sequence Length = 2627 Score = 283 bits (143), Expect = 3e-73 Identities = 217/242 (89%) Strand = Plus / Minus Query: 235 gcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttgacc 294 ||||||| || |||||| ||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 2355 gcgagctgggtgcggatgagcttggcggccaaaaccatgttggtgagggcaggcttcacc 2296 Query: 295 tcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcg 354 || | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2295 tctgtgtacttgcgggtcttgagaccgcagtcagggttcacccagagaatgttagtgtcg 2236 Query: 355 agcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggg 414 ||||| || ||||||||||||| |||||| |||||||||||| ||||||||||||||||| Sbjct: 2235 agcaccgcaagcatcttgttgatgcggtccgcaatctcctccgtggacgggatcctgggg 2176 Query: 415 gagtggatgtcgtacacgcccgggccaatgccagcaccgtacaccacaccctngcggaag 474 |||||||||||||| || || || |||||||||||||| ||| |||||||| ||||||| Sbjct: 2175 gagtggatgtcgtagacaccaggaccaatgccagcaccatacttcacaccctcgcggaag 2116 Query: 475 ac 476 || Sbjct: 2115 ac 2114
>gb|BT009353.1| Triticum aestivum clone wlm96.pk0018.c10:fis, full insert mRNA sequence Length = 2634 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| ||||||| || ||||||||||||| ||||||||||| | Sbjct: 2364 tggcgagctgggtgcggatgagcttggccgcggcaaccatgttggtcagggcgggcttca 2305 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 2304 cctccgtgtacttgcgggtcttgaggccgcagtcagggttcacccacaggatgttggtgt 2245 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 |||| || |||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 2244 cgaggaccgcgagcatcttgttgacgcggtcggcaatctcctccgtggaggggatcctgg 2185 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgta 455 ||||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 2184 gggagtggatgtcatagacgcctgggccaatgccggctccgta 2142
>gb|AY104793.1| Zea mays PCO079166 mRNA sequence Length = 2720 Score = 234 bits (118), Expect = 2e-58 Identities = 186/209 (88%) Strand = Plus / Minus Query: 268 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtca 327 ||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| |||||| Sbjct: 2364 accatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtca 2305 Query: 328 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 387 |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| || Sbjct: 2304 gggttcacccagaggatgttggtgtcgagcacggcgagcatcttctcgacgcggtctgcg 2245 Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcca 447 |||||||| |||| || ||||| || |||||||||||||| || || |||||||||||| Sbjct: 2244 atctcctctgtggagggaatcctaggagagtggatgtcgtagacaccagggccaatgcca 2185 Query: 448 gcaccgtacaccacaccctngcggaagac 476 || |||||| |||||||| ||||||||| Sbjct: 2184 gctccgtacttcacaccctcgcggaagac 2156
>gb|AY111481.1| Zea mays CL598_4 mRNA sequence Length = 664 Score = 228 bits (115), Expect = 1e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 268 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtca 327 ||||||||||| ||||| ||||| ||||| | ||||||||| |||||||||||||||||| Sbjct: 335 accatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtca 394 Query: 328 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 387 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 395 gggttcacccagaggatgttggtgtcgagcacggcgagcatcttgttgacgcggtccgcg 454 Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcca 447 |||||||| |||| ||||||||||| |||||||||||||| || || || || || ||| Sbjct: 455 atctcctcggtggaggggatcctgggcgagtggatgtcgtagacacctggaccgattcca 514 Query: 448 gcaccgtacaccacaccctngcggaa 473 || |||||| |||||||| |||||| Sbjct: 515 gctccgtacttcacaccctcgcggaa 540
>gb|BT016781.1| Zea mays clone Contig614 mRNA sequence Length = 1759 Score = 220 bits (111), Expect = 3e-54 Identities = 182/206 (88%) Strand = Plus / Minus Query: 268 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtca 327 ||||||||||| ||||| ||||| ||||| | ||||||||| |||||||||||||||||| Sbjct: 1358 accatgttggtcagggcaggcttcacctccgtgtacttgcgtgtcttgagaccgcagtca 1299 Query: 328 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 387 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 1298 gggttcacccagaggatgttggtgtccagcacggcgagcatcttgttgacgcggtccgcg 1239 Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcca 447 |||||||| |||| ||||||||||| |||||||||||||| || || || || || ||| Sbjct: 1238 atctcctcggtggaggggatcctgggcgagtggatgtcgtagacacctggaccgattcca 1179 Query: 448 gcaccgtacaccacaccctngcggaa 473 || |||||| |||||||| |||||| Sbjct: 1178 gctccgtacttcacaccctcgcggaa 1153
>gb|AF439723.1|AF439723 Zea mays methionine synthase mRNA, partial cds Length = 2300 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Minus Query: 268 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtca 327 ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 2255 accatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtcg 2196 Query: 328 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 387 |||||||||||||||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 2195 gggttcacccagaggatgttggtgtccagcaccgccagcatcttgtcgatgcggtcggcg 2136 Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcca 447 |||||||| ||||||||||||||||||||||||||||| || || ||||| ||||| Sbjct: 2135 atctcctcagccgacgggatcctgggggagtggatgtcgtagacaccggggccgatgccc 2076 Query: 448 gcaccgtac 456 || |||||| Sbjct: 2075 gcgccgtac 2067
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 267 aaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtc 326 |||||||||||| ||||||||||||||||| | ||||||||| ||||||||||| ||||| Sbjct: 72720 aaccatgttggtcagggcgggcttgacctccgtgtacttgcgtgtcttgagaccacagtc 72779 Query: 327 agggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggc 386 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 72780 cgggttcacccagaggatgttggtgtcaagcacagcaagcatcttgttgacgcggtccgc 72839 Query: 387 aatctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcc 446 ||||||||| | | || |||||||| ||||||||||| || || || ||||||||||| Sbjct: 72840 aatctcctcggtagtgggaatcctgggagagtggatgtcatagacaccagggccaatgcc 72899 Query: 447 agc 449 ||| Sbjct: 72900 agc 72902
>gb|AY109415.1| Zea mays CL598_2 mRNA sequence Length = 3017 Score = 200 bits (101), Expect = 3e-48 Identities = 167/189 (88%) Strand = Plus / Plus Query: 268 accatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtca 327 ||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 676 accatgttggtcagggcgggcttgacctccgtgtacttgcgggtcttgaggccgcagtcg 735 Query: 328 gggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggca 387 |||||||||||||||||||||||||| ||||| || |||||||||| || ||||||||| Sbjct: 736 gggttcacccagaggatgttggtgtccagcaccgccagcatcttgtcgatgcggtcggcg 795 Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgcca 447 |||||||| |||||||||||||| |||||||||||||| || || ||||| ||||| Sbjct: 796 atctcctcagccgacgggatcctgggcgagtggatgtcgtagacaccggggccgatgccc 855 Query: 448 gcaccgtac 456 || |||||| Sbjct: 856 gcgccgtac 864
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 180 bits (91), Expect = 3e-42 Identities = 172/199 (86%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25306437 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25306378 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 25306377 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25306318 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 25306317 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 25306258 Query: 413 gggagtggatgtcgtacac 431 ||||||||||||| ||||| Sbjct: 25306257 gggagtggatgtcatacac 25306239
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 180 bits (91), Expect = 3e-42 Identities = 172/199 (86%) Strand = Plus / Plus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 136923 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 136982 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 136983 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 137042 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 137043 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 137102 Query: 413 gggagtggatgtcgtacac 431 ||||||||||||| ||||| Sbjct: 137103 gggagtggatgtcatacac 137121
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 180 bits (91), Expect = 3e-42 Identities = 172/199 (86%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 |||| |||| || |||||| ||||||| || || ||||||||||| || || || || | Sbjct: 25397746 tggcaagctgggtgcggatgagcttggcagcatctaccatgttggttagtgcaggtttca 25397687 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 25397686 cctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtgt 25397627 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 | ||||| || ||||||||||||| |||||| || |||||||| |||| |||||||||| Sbjct: 25397626 caagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctgg 25397567 Query: 413 gggagtggatgtcgtacac 431 ||||||||||||| ||||| Sbjct: 25397566 gggagtggatgtcatacac 25397548
>ref|XM_469072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1149 Score = 167 bits (84), Expect = 4e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 292 acctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtg 351 ||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 944 acctcggtgtatttgcgggtcttgagaccgcggtcagggttcacctagaggatgttggtg 1003 Query: 352 tcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctg 411 || ||||| || ||||||||||||| |||||| || |||||||| |||| ||||||||| Sbjct: 1004 tcaagcacggcaagcatcttgttgatgcggtccgcgatctcctcggtggaggggatcctg 1063 Query: 412 ggggagtggatgtcgtacac 431 |||||||||||||| ||||| Sbjct: 1064 ggggagtggatgtcatacac 1083
>emb|Z49150.1|CBKPMETGN C.blumei kinetoplast met gene for cobalamine-independent methionine synthase Length = 2795 Score = 149 bits (75), Expect = 1e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 286 ggcttgacctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatg 345 ||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| | |||| Sbjct: 2412 ggcttcacctcagcgtatttgcgggtcttgagaccacagtcagggttcacccacaagatg 2353 Query: 346 ttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacggg 405 ||||| || || ||||| ||||||||||||| | ||| |||||||| || | || ||| Sbjct: 2352 ttggtttcaaggacagcaagcatcttgttgatcctgtcagcaatctcttctgttgatggg 2293 Query: 406 atcctgggggagtggatgtcgtacacgcccgggccaatgccagcaccgtac 456 || ||||||||||||||||||||||| ||||| || || |||||||||||| Sbjct: 2292 attctgggggagtggatgtcgtacacacccggcccgattccagcaccgtac 2242
>gb|AF082893.1| Solanum tuberosum methionine synthase (MS) mRNA, complete cds Length = 2644 Score = 119 bits (60), Expect = 9e-24 Identities = 147/176 (83%) Strand = Plus / Minus Query: 280 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccag 339 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||||||||||||||| Sbjct: 2296 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcagggttcacccat 2237 Query: 340 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttg 399 | |||||||||||| || || || ||||||||||| || | ||| |||||||| || | Sbjct: 2236 aagatgttggtgtcaagaactgcaagcatcttgttaactctgtcagcaatctcttcggtt 2177 Query: 400 gacgggatcctgggggagtggatgtcgtacacgcccgggccaatgccagcaccgta 455 || || || || || |||||||||||||| || || |||||||| ||||| ||||| Sbjct: 2176 gatggtattcttggagagtggatgtcgtagacaccagggccaataccagctccgta 2121
>gb|AF220054.1|AF220054 Coffea arabica methionine synthase mRNA, partial cds Length = 680 Score = 119 bits (60), Expect = 9e-24 Identities = 183/224 (81%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 |||| |||| || |||||| ||||||||||| |||||||||| |||||| ||||| | Sbjct: 646 tggcaagctgggtgcggatttgcttggcggcggcaaccatgttttggagggccggcttca 587 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||| ||||||||||||||||||||||| || |||||||| ||||| | |||||| || | Sbjct: 586 cctcagcgtacttgcgggtcttgagaccacaatcagggttgacccacaagatgttcgtat 527 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 | ||||| || ||||||||||| || | ||| |||||||| || | || || || || | Sbjct: 526 ccagcactgcaagcatcttgttaactctgtcagcaatctcttctgtcgatggtattcttg 467 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtac 456 | ||||| ||||| || || ||||| ||||| |||||||||||| Sbjct: 466 gagagtgaatgtcatagacacccggaccaattccagcaccgtac 423
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds Length = 2695 Score = 111 bits (56), Expect = 2e-21 Identities = 172/211 (81%) Strand = Plus / Minus Query: 266 caaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagt 325 |||||||||| |||||||| ||||| ||||| | |||||| ||||||||||| || |||| Sbjct: 2328 caaccatgtttgtgagggctggcttcacctcagtgtacttacgggtcttgagcccacagt 2269 Query: 326 cagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcgg 385 ||||||||||||| | |||||| | |||||||| || ||||||||||||| | ||| | Sbjct: 2268 cagggttcacccacaagatgttcttctcgagcactgccagcatcttgttgattctgtcag 2209 Query: 386 caatctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgc 445 |||| || || | | || || || |||||||||||||| || || || |||||||| | Sbjct: 2208 caatttcttcagttggtggtattcttggggagtggatgtcatagacaccagggccaattc 2149 Query: 446 cagcaccgtacaccacaccctngcggaagac 476 ||||||| ||| |||||| | ||||||||| Sbjct: 2148 cagcaccatacttcacaccttcgcggaagac 2118
>emb|X83499.1|CRMETS C.roseus MetE mRNA for methionine synthase Length = 2602 Score = 109 bits (55), Expect = 8e-21 Identities = 133/159 (83%) Strand = Plus / Minus Query: 298 gcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagc 357 ||||||||||||||||||||||| ||||| ||||| ||||| | |||||||||||| | | Sbjct: 2272 gcgtacttgcgggtcttgagaccacagtcggggttaacccacaagatgttggtgtccaac 2213 Query: 358 acagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggag 417 || || ||||||||||||| | ||||||||||||||| | || || || || ||||| Sbjct: 2212 actgcaagcatcttgttgattctgtcggcaatctcctctgttgatggtattcttggggaa 2153 Query: 418 tggatgtcgtacacgcccgggccaatgccagcaccgtac 456 ||||| ||||| || || |||||||| ||||| |||||| Sbjct: 2152 tggatatcgtagacaccagggccaattccagctccgtac 2114
>gb|AF096261.1|AF096261 Lycopersicon esculentum ethylene-responsive methionine synthase (ER69) mRNA, partial cds Length = 206 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 280 agggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccag 339 ||||| ||||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 171 agggctggcttcacctcggtgtacttgcgagtcttgagaccacagtcggggttcacccac 112 Query: 340 aggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttg 399 | |||||||||||| || || || ||||||||||| || | | |||||||||| || | Sbjct: 111 aagatgttggtgtcaaggactgcaagcatcttgttaactctgacggcaatctcttcggtt 52 Query: 400 gacgggatcctgggggagtggatgtcgtacacgcccgggccaatgccagc 449 || || || || || ||||||||||||||||| || ||||| || ||||| Sbjct: 51 gatggtattcttggagagtggatgtcgtacacaccagggccgataccagc 2
>ref|NM_121798.2| Arabidopsis thaliana ATCIMS (COBALAMIN-INDEPENDENT METHIONINE SYNTHASE); 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G17920 (ATCIMS) mRNA, complete cds Length = 2682 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2379 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2320 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2319 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2260 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2259 ctaggacagcaagcatcttgttgac 2235
>gb|BT000691.1| Arabidopsis thaliana clone RAFL08-16-E05 (R11047) putative 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (At5g17920) mRNA, complete cds Length = 2585 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2372 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2313 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2312 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2253 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2252 ctaggacagcaagcatcttgttgac 2228
>gb|AY091692.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2298 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2287 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2228 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2227 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2168 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2167 ctaggacagcaagcatcttgttgac 2143
>gb|AY070771.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2648 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY069876.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2594 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|AJ608673.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms1 gene) Length = 2326 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2292 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagcgcaggcttga 2233 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2232 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2173 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2172 ctaggacagcaagcatcttgttgac 2148
>gb|AY057499.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2613 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY057478.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2608 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AY056098.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2460 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>dbj|AK222123.1| Arabidopsis thaliana mRNA for 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase, complete cds, clone: RAFL22-94-C14 Length = 1684 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 1397 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 1338 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 1337 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 1278 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 1277 ctaggacagcaagcatcttgttgac 1253
>gb|AY048201.1| Arabidopsis thaliana AT5g17920/MPI7_60 mRNA, complete cds Length = 2549 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>gb|AF370522.1|AF370522 Arabidopsis thaliana cobalamin-independent methionine synthase (MPI7.9) mRNA, complete cds Length = 2646 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2369 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2310 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2309 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2250 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2249 ctaggacagcaagcatcttgttgac 2225
>emb|BX831470.1|CNS0A1W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1156 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 917 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 858 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 857 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 798 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 797 ctaggacagcaagcatcttgttgac 773
>emb|BX833585.1|CNS09Z4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL64ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 601 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 319 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 260 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 259 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 200 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 199 ctaggacagcaagcatcttgttgac 175
>dbj|AB011480.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPI7 Length = 40548 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 39733 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 39674 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 39673 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 39614 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 39613 ctaggacagcaagcatcttgttgac 39589
>gb|U97200.1|ATU97200 Arabidopsis thaliana cobalamin-independent methionine synthase (ATCIMS) mRNA, complete cds Length = 2595 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 2295 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 2236 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2235 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2176 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2175 ctaggacagcaagcatcttgttgac 2151
>gb|BT012108.1| Arabidopsis thaliana At5g17920 mRNA sequence Length = 2295 Score = 97.6 bits (49), Expect = 3e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || |||||| Sbjct: 2284 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttgg 2225 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||||| |||||| |||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 2224 cctcggtgtacttacgggtcttgagaccacagtcagggttaacccaaaggatgttctgct 2165 Query: 353 cgagcacagcgagcatcttgttgac 377 | || ||||| |||||||||||||| Sbjct: 2164 ctaggacagcaagcatcttgttgac 2140
>gb|U84889.1|MCU84889 Mesembryanthemum crystallinum methionine synthase (MetE) mRNA, complete cds Length = 2734 Score = 95.6 bits (48), Expect = 1e-16 Identities = 180/224 (80%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 |||||||||| ||||| ||||||||| || |||||||||| | || || || |||| Sbjct: 2407 tggcgagctcttggcggagctgcttggcagcagcaaccatgtttgacagagctgggttga 2348 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgt 352 |||| ||||||| |||||||||||||| ||||| ||||||||||| | || |||| | | Sbjct: 2347 cctcaccgtacttacgggtcttgagaccacagtcggggttcacccacaagacgttgcttt 2288 Query: 353 cgagcacagcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgg 412 | | || || |||||||| ||| ||| || |||| |||||| ||| |||||||| | Sbjct: 2287 ccaagactgcaagcatcttcctgatgcgatcagcaagctcctcggtgggtgggatcctag 2228 Query: 413 gggagtggatgtcgtacacgcccgggccaatgccagcaccgtac 456 | ||||||||||||||||| || || ||||| |||||||||||| Sbjct: 2227 gagagtggatgtcgtacacaccgggaccaattccagcaccgtac 2184
>dbj|AK221003.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-65-M04 Length = 390 Score = 87.7 bits (44), Expect = 3e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 233 tggcgagctcggcgcggatctgcttggcggcctcaaccatgttggtgagggcgggcttga 292 ||||||||| || |||||| |||| || || ||||||||||| |||| || ||||||| Sbjct: 103 tggcgagctgggagcggatgagcttagccgcatcaaccatgttcttgagtgcaggcttga 44 Query: 293 cctcggcgtacttgcgggtcttgagaccgcagtcagggtt 332 |||||| |||||| |||||||||||||| ||||||||||| Sbjct: 43 cctcggtgtacttacgggtcttgagaccacagtcagggtt 4
>gb|AY662341.1| Medicago sativa methionine synthase mRNA, partial cds Length = 552 Score = 81.8 bits (41), Expect = 2e-12 Identities = 125/153 (81%) Strand = Plus / Minus Query: 300 gtacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcac 359 ||||||||||||||| || || ||||||||||| ||||| | ||||| | || || || Sbjct: 549 gtacttgcgggtctttagcccacagtcagggttgacccacaaaatgttcttctcaaggac 490 Query: 360 agcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtg 419 ||| ||||||||||||| | |||||| |||||||| | | ||||| || |||||||| Sbjct: 489 agcaagcatcttgttgatcctgtcggcgatctcctcagttggtgggattcttggggagtg 430 Query: 420 gatgtcgtacacgcccgggccaatgccagcacc 452 |||||| ||||| || |||||||| |||||||| Sbjct: 429 gatgtcatacacaccagggccaattccagcacc 397
>ref|XM_952059.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 255 cttggcggcctcaaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 314 |||||||||||||||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 315 gagaccgcagtcagggttcacccagag 341 ||||||||||| ||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>ref|XM_326366.1| Neurospora crassa OR74A hypothetical protein (NCU06512.1) partial mRNA Length = 2310 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 255 cttggcggcctcaaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 314 |||||||||||||||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2277 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2218 Query: 315 gagaccgcagtcagggttcacccagag 341 ||||||||||| ||||| | |||||| Sbjct: 2217 aagaccgcagtcggggttgatccagag 2191
>gb|AC126009.22| Medicago truncatula clone mth2-15c20, complete sequence Length = 118705 Score = 69.9 bits (35), Expect = 7e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 266 caaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagt 325 ||||||||||| |||||| ||||| ||||| | |||||| ||||| || || || |||| Sbjct: 70102 caaccatgttgaggagggcaggcttaacctctgtgtacttacgggtttttagcccacagt 70161 Query: 326 cagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcgg 385 ||||||| ||||| | | ||| | || || ||||| ||||||||||||| | ||||| Sbjct: 70162 cagggttgacccacaaaacgttcttctcaaggacagcaagcatcttgttgatcctgtcgg 70221 Query: 386 caatctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgc 445 | ||||| || | | ||||| || |||||||||||||| ||||| || |||||||| | Sbjct: 70222 cgatctcgtcggttggtgggattcttggggagtggatgtcatacacaccagggccaattc 70281 Query: 446 cagcacc 452 ||||||| Sbjct: 70282 cagcacc 70288
>gb|AC137822.30| Medicago truncatula clone mth2-31e20, complete sequence Length = 140561 Score = 69.9 bits (35), Expect = 7e-09 Identities = 149/187 (79%) Strand = Plus / Plus Query: 266 caaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtcttgagaccgcagt 325 ||||||||||| |||||| ||||| ||||| | |||||| ||||| || || || |||| Sbjct: 54632 caaccatgttgaggagggcaggcttaacctctgtgtacttacgggtttttagcccacagt 54691 Query: 326 cagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttgacgcggtcgg 385 ||||||| ||||| | | ||| | || || ||||| ||||||||||||| | ||||| Sbjct: 54692 cagggttgacccacaaaacgttcttctcaaggacagcaagcatcttgttgatcctgtcgg 54751 Query: 386 caatctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaatgc 445 | ||||| || | | ||||| || |||||||||||||| ||||| || |||||||| | Sbjct: 54752 cgatctcgtcggttggtgggattcttggggagtggatgtcatacacaccagggccaattc 54811 Query: 446 cagcacc 452 ||||||| Sbjct: 54812 cagcacc 54818
>gb|AF404820.1|AF404820 Neurospora crassa methionine synthase (met-8) gene, complete cds Length = 3269 Score = 69.9 bits (35), Expect = 7e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 255 cttggcggcctcaaccatgttggtgagggcgggcttgacctcggcgtacttgcgggtctt 314 |||||||||||||||||||| || |||||| ||||||||| | ||||||||||||| Sbjct: 2643 cttggcggcctcaaccatgtgggagagggcacccttgacctcatcccacttgcgggtctt 2584 Query: 315 gagaccgcagtcagggttcacccagag 341 ||||||||||| ||||| | |||||| Sbjct: 2583 aagaccgcagtcggggttgatccagag 2557
>emb|AM158915.1| Plantago major partial mRNA for methionine synthase (met1 gene) Length = 772 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 309 ggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcacagcgagcat 368 |||||| ||||| ||||||||||| ||||| || |||||||| |||||||| || ||||| Sbjct: 400 ggtcttcagaccacagtcagggttgacccatagaatgttggtctcgagcacggcaagcat 341 Query: 369 cttgtt 374 |||||| Sbjct: 340 cttgtt 335
>gb|BC034830.1| Mus musculus cDNA clone MGC:28753 IMAGE:4483004, complete cds Length = 2755 Score = 63.9 bits (32), Expect = 4e-07 Identities = 125/156 (80%) Strand = Plus / Minus Query: 301 tacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcaca 360 ||||| |||||||||||||| || |||||||||||||| | | ||||| || | || Sbjct: 2357 tacttacgggtcttgagaccacaatcagggttcacccacaaaacgttggactccaaaact 2298 Query: 361 gcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtgg 420 || ||||| || ||| ||| || ||||| ||||| ||| |||||||| |||||||| Sbjct: 2297 gcaagcattttcctgatgcgatcagcaatttcctcagtgggtgggatccttggggagtga 2238 Query: 421 atgtcgtacacgcccgggccaatgccagcaccgtac 456 |||||||| || || |||||||| |||||||||||| Sbjct: 2237 atgtcgtagacaccagggccaataccagcaccgtac 2202
>gb|BC032196.1| Mus musculus cDNA clone MGC:38244 IMAGE:5324059, complete cds Length = 2766 Score = 63.9 bits (32), Expect = 4e-07 Identities = 125/156 (80%) Strand = Plus / Minus Query: 301 tacttgcgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcaca 360 ||||| |||||||||||||| || |||||||||||||| | | ||||| || | || Sbjct: 2368 tacttacgggtcttgagaccacaatcagggttcacccacaaaacgttggactccaaaact 2309 Query: 361 gcgagcatcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtgg 420 || ||||| || ||| ||| || ||||| ||||| ||| |||||||| |||||||| Sbjct: 2308 gcaagcattttcctgatgcgatcagcaatttcctcagtgggtgggatccttggggagtga 2249 Query: 421 atgtcgtacacgcccgggccaatgccagcaccgtac 456 |||||||| || || |||||||| |||||||||||| Sbjct: 2248 atgtcgtagacaccagggccaataccagcaccgtac 2213
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 411 gggggagtggatgtcgtacacgcccgggccaat 443 |||||||||||||||||| |||||||||||||| Sbjct: 1601426 gggggagtggatgtcgtagacgcccgggccaat 1601394
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 388 atctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggccaat 443 ||||||||||||| ||| | || || |||||||||||||||||||| |||||||| Sbjct: 4948328 atctcctccttggtcggcacccgtggcgagtggatgtcgtacacgccagggccaat 4948383
>ref|NM_122107.2| Arabidopsis thaliana 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase AT5G20980 mRNA, complete cds Length = 2728 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 376 ||||||||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2348 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2294
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 307 cgggtcttgagaccgcagtcagggttcacccagag 341 |||||||||||||||||||||||||| | |||||| Sbjct: 2186998 cgggtcttgagaccgcagtcagggttgatccagag 2186964
>emb|AJ608675.1| Arabidopsis thaliana mRNA for cobalamin-independent methionine synthase (atms3 gene) Length = 2464 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 376 ||||||||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 2343 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 2289
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 322 cagtcagggttcacccagaggatgttggtgtcgagcacagcgagcatcttgttga 376 ||||||||||||||||| |||| ||| |||| || ||||| ||||||||||||| Sbjct: 68186 cagtcagggttcacccaaaggactttgctgtccagaacagcaagcatcttgttga 68240
>dbj|AB221011.1| Beta vulgaris BvMS1 mRNA for methionine synthase, complete cds Length = 2720 Score = 52.0 bits (26), Expect = 0.002 Identities = 119/150 (79%) Strand = Plus / Minus Query: 307 cgggtcttgagaccgcagtcagggttcacccagaggatgttggtgtcgagcacagcgagc 366 |||||||||||||| || |||||||||||||| | | ||||| || | || || ||| Sbjct: 2305 cgggtcttgagaccacaatcagggttcacccacaaaacgttggactccaaaactgcaagc 2246 Query: 367 atcttgttgacgcggtcggcaatctcctccttggacgggatcctgggggagtggatgtcg 426 || || ||| ||| || ||||| ||||| ||| |||||||| |||||||| |||||| Sbjct: 2245 attttcctgatgcgatcagcaatttcctcagtgggtgggatccttggggagtgaatgtcg 2186 Query: 427 tacacgcccgggccaatgccagcaccgtac 456 || | || |||||||| |||||||||||| Sbjct: 2185 tagaacccagggccaataccagcaccgtac 2156
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 310 gtcttgagaccgcagtcagggttcaccca 338 ||||||||||||||||| ||||||||||| Sbjct: 1027924 gtcttgagaccgcagtccgggttcaccca 1027896
>dbj|AK107388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C09, full insert sequence Length = 2566 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcacccagag 341 |||||||||||||||||| |||||||| | |||||| Sbjct: 2286 gcgggtcttgagaccgcaatcagggttgatccagag 2251
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 412 ggggagtggatgtcgtacacgcc 434 ||||||||||||||||||||||| Sbjct: 136374 ggggagtggatgtcgtacacgcc 136352 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcaccca 338 ||||||||| ||||||||||| ||||| ||||| Sbjct: 136480 gcgggtcttcagaccgcagtcggggttgaccca 136448
>dbj|AK111164.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B05, full insert sequence Length = 2868 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 310 gtcttgagaccgcagtcagggtt 332 ||||||||||||||||||||||| Sbjct: 2332 gtcttgagaccgcagtcagggtt 2310 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 ggggagtggatgtcgtacacgcccgggcc 440 |||||||||||||||||||| || ||||| Sbjct: 2230 ggggagtggatgtcgtacacaccggggcc 2202
>gb|AY702345.1| Phytophthora infestans 5-methyltetrahydropteroyl-triglutamate-homocystein S-methyltransferase mRNA, partial cds Length = 819 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Minus Query: 386 caatctcctccttggacgggatcctgggggagtggatgtcgtacacgcccgggcc 440 ||||||||||||||| ||| | | |||||||||||||||||| ||||||||| Sbjct: 787 caatctcctccttgggcggcaccacaggggagtggatgtcgtacgtgcccgggcc 733
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 304 ttgcgggtcttgagaccgcagtcagggttcaccca 338 |||||||||||||| |||||||| ||||| ||||| Sbjct: 2998441 ttgcgggtcttgagcccgcagtcggggttgaccca 2998407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 cgccttggcgagctcggcgcg 248 ||||||||||||||||||||| Sbjct: 384455 cgccttggcgagctcggcgcg 384475
>ref|XM_370215.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06712.4) partial mRNA Length = 2301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggt 331 ||||||||| |||||||||||||||| Sbjct: 2223 gcgggtcttcagaccgcagtcagggt 2198
>ref|XM_751988.1| Ustilago maydis 521 hypothetical protein (UM00934.1) partial mRNA Length = 2304 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 307 cgggtcttgagaccgcagtcagggttcacccaga 340 |||||||||||||| ||||| ||||| ||||||| Sbjct: 2228 cgggtcttgagaccacagtcggggttgacccaga 2195
>gb|AF263012.1|AF263011S2 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene cluster, downstream region Length = 10029 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 412 ggggagtggatgtcgtacacgcccgg 437 ||||||||||||||||| |||||||| Sbjct: 6719 ggggagtggatgtcgtagacgcccgg 6744 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 306 gcgggtcttgagaccgcagtcagggttcaccca 338 ||||||||| || |||||||| ||||||||||| Sbjct: 6613 gcgggtcttcaggccgcagtcggggttcaccca 6645
>gb|AF246404.1|AF246404 Acidithiobacillus ferroxidans 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene, partial sequence Length = 1683 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 412 ggggagtggatgtcgtacacgcccgg 437 ||||||||||||||||| |||||||| Sbjct: 1306 ggggagtggatgtcgtagacgcccgg 1281
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 cgggtcttgagaccgcagtcagggtt 332 |||||||| ||||||||||||||||| Sbjct: 579808 cgggtcttcagaccgcagtcagggtt 579833 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 ggggagtggatgtcgtacacgcccgggcc 440 |||||||| |||||||| ||||||||||| Sbjct: 579913 ggggagtgaatgtcgtagacgcccgggcc 579941
>gb|AC146417.3| Pan troglodytes BAC clone RP43-29B12 from 7, complete sequence Length = 196843 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ccagattattcaaagtaaaac 153 ||||||||||||||||||||| Sbjct: 160771 ccagattattcaaagtaaaac 160791
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 306 gcgggtcttgagaccgcagtcagggttcaccca 338 |||||||||||| |||||||| ||||| ||||| Sbjct: 4708286 gcgggtcttgaggccgcagtccgggttgaccca 4708318
>ref|XM_391001.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG10825.1) partial mRNA Length = 2301 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 cgggtcttgagaccgcagtcagggt 331 |||||||||||||| |||||||||| Sbjct: 2222 cgggtcttgagaccacagtcagggt 2198
>emb|AL390766.16| Human DNA sequence from clone RP13-348N17 on chromosome 10 Contains part of the PARD3 gene for par-3 partitioning defective 3 homolog (C.elegans), complete sequence Length = 193131 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ccagattattcaaagtaaaac 153 ||||||||||||||||||||| Sbjct: 157149 ccagattattcaaagtaaaac 157169
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 432 gcccgggccaatgccagcacc 452 ||||||||||||||||||||| Sbjct: 3212814 gcccgggccaatgccagcacc 3212834
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 310 gtcttgagaccgcagtcagggttcaccca 338 |||||||| ||||| |||||||||||||| Sbjct: 269521 gtcttgagcccgcaatcagggttcaccca 269493
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 306 gcgggtcttgagaccgcagtcagggttcaccca 338 |||||||||||| |||||||| ||||| ||||| Sbjct: 3542175 gcgggtcttgaggccgcagtcggggttgaccca 3542207
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cggcaatctcctccttggacg 403 ||||||||||||||||||||| Sbjct: 249712 cggcaatctcctccttggacg 249692
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcaccca 338 ||||||||| ||||||||||| ||||| ||||| Sbjct: 2498626 gcgggtcttcagaccgcagtcggggttgaccca 2498594 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gagtggatgtcgtacacgcc 434 |||||||||||||||||||| Sbjct: 2498517 gagtggatgtcgtacacgcc 2498498
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 473187 cagtcagggttcacccagag 473168
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 atcttgttgacgcggtcggcaatc 390 |||||||||||||||||| ||||| Sbjct: 2475457 atcttgttgacgcggtcgccaatc 2475480
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gagtggatgtcgtacacgcc 434 |||||||||||||||||||| Sbjct: 1655486 gagtggatgtcgtacacgcc 1655505
>gb|AC087253.2| Pan troglodytes clone RP43-150N20, complete sequence Length = 126559 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 16407 cagtcagggttcacccagag 16388
>ref|XM_659310.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6798.2), mRNA Length = 1620 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cgagcacagcgagcatcttg 372 |||||||||||||||||||| Sbjct: 811 cgagcacagcgagcatcttg 792
>ref|XM_656955.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4443.2), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcacccagag 341 ||||||||| ||||| ||||||||||| | |||||| Sbjct: 2214 gcgggtcttcagaccacagtcagggttgatccagag 2179
>gb|AY502077.1| Venturia inaequalis microsatellite TG9/129 sequence Length = 542 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcacccagag 341 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 53 gcgggtcttgagaccacagtctgggttgatccagag 18
>gb|AC084729.2| Papio anubis clone RP41-12N1, complete sequence Length = 208707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 29905 cagtcagggttcacccagag 29886
>gb|AC142342.1| Pan troglodytes BAC clone RP43-45D19 from 7, complete sequence Length = 171571 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 163178 cagtcagggttcacccagag 163197
>gb|AC123965.3| Macaca mulatta clone CH250-564L7, complete sequence Length = 113368 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 107413 cagtcagggttcacccagag 107394
>gb|AF538868.1| Bifidobacterium longum plasmid pDOJH10L, complete sequence Length = 10073 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gatctgcttggcggcctcaa 268 |||||||||||||||||||| Sbjct: 6076 gatctgcttggcggcctcaa 6095
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cgccttggcgagctcggcgcggat 251 ||||||||||||||||| |||||| Sbjct: 61299 cgccttggcgagctcggggcggat 61276
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cgccttggcgagctcggcgcggat 251 ||||||||||||||||| |||||| Sbjct: 344059 cgccttggcgagctcggggcggat 344036
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cgccttggcgagctcggcgcggat 251 ||||||||||||||||| |||||| Sbjct: 134631 cgccttggcgagctcggggcggat 134654
>gb|AC165189.4| Nomascus leucogenys leucogenys clone CH271-329K4, complete sequence Length = 191051 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 89673 cagtcagggttcacccagag 89654
>gb|AE005950.1| Caulobacter crescentus CB15 section 276 of 359 of the complete genome Length = 12754 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ggcgcggatctgcttggcggcctc 266 ||||||||||| |||||||||||| Sbjct: 7030 ggcgcggatctccttggcggcctc 7007
>dbj|AB226113.1| Aspergillus oryzae cDNA, contig sequence: AoEST2970 Length = 2927 Score = 40.1 bits (20), Expect = 6.4 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 307 cgggtcttgagacc-gcagtcagggttcacccagag 341 |||||||||||||| |||||||||||| | |||||| Sbjct: 2401 cgggtcttgagacccgcagtcagggttgatccagag 2366
>gb|AF226997.1| Cladosporium fulvum methionine synthase gene, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcacccagag 341 ||||||||||||||| ||||| ||||| | |||||| Sbjct: 2232 gcgggtcttgagaccacagtctgggttgatccagag 2197
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 404538 cagtcagggttcacccagag 404519
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atgaacaattcgccactcaa 26 |||||||||||||||||||| Sbjct: 41912770 atgaacaattcgccactcaa 41912751
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 392175 cagtcagggttcacccagag 392156
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 427436 cagtcagggttcacccagag 427417
>dbj|AB187597.1| Bifidobacterium longum plasmid pTB6 DNA, complete sequence Length = 3624 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gatctgcttggcggcctcaa 268 |||||||||||||||||||| Sbjct: 2196 gatctgcttggcggcctcaa 2215
>gb|AF139129.1|AF139129 Bifidobacterium longum plasmid pKJ36, complete sequence Length = 3625 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gatctgcttggcggcctcaa 268 |||||||||||||||||||| Sbjct: 2204 gatctgcttggcggcctcaa 2223
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atgaacaattcgccactcaa 26 |||||||||||||||||||| Sbjct: 14847 atgaacaattcgccactcaa 14828
>gb|AC124039.3| Macaca mulatta clone CH250-191K8, complete sequence Length = 174570 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 6817 cagtcagggttcacccagag 6798
>gb|AY066026.1| Bifidobacterium longum plasmid pB44, complete sequence Length = 3624 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gatctgcttggcggcctcaa 268 |||||||||||||||||||| Sbjct: 2201 gatctgcttggcggcctcaa 2220
>gb|AF275676.1|AF275676 Aspergillus nidulellus cobalamin-independent methionine synthase (metH/D) gene, complete cds Length = 4232 Score = 40.1 bits (20), Expect = 6.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 306 gcgggtcttgagaccgcagtcagggttcacccagag 341 ||||||||| ||||| ||||||||||| | |||||| Sbjct: 3435 gcgggtcttcagaccacagtcagggttgatccagag 3400
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 307 cgggtcttgagaccgcagtcagggttcaccca 338 |||||||| ||||||||||| ||||| ||||| Sbjct: 1265044 cgggtcttcagaccgcagtccgggttgaccca 1265075
>gb|AC002080.1|AC002080 Human BAC clone CTA-253B13 from 7q31-q32, complete sequence Length = 171905 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 20800 cagtcagggttcacccagag 20781
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 417 gtggatgtcgtacacgcccgggcc 440 |||||||||||| ||||||||||| Sbjct: 907282 gtggatgtcgtaaacgcccgggcc 907305
>gb|AC142557.3| Cercopithecus aethiops clone CH252-402M4, complete sequence Length = 150854 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cagtcagggttcacccagag 341 |||||||||||||||||||| Sbjct: 42129 cagtcagggttcacccagag 42110
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 gggcgggcttgacctcggcgtact 304 |||||| ||||||||||||||||| Sbjct: 1408386 gggcggccttgacctcggcgtact 1408363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,944,606 Number of Sequences: 3902068 Number of extensions: 2944606 Number of successful extensions: 52702 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 51873 Number of HSP's gapped (non-prelim): 799 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
