>SOXA_RHOSG (P54995) Dibenzothiophene desulfurization enzyme A|
          Length = 453

 Score = 33.1 bits (74), Expect = 0.63
 Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
 Frame = -1

Query: 580 LEAAVAGQLLLNEHWIQDLPYDRTGELESLVSFVKNNLDLCKWAAVATVATQAFSLFLAM 401
           L  A A    +N+H   D  YDR  E    V  + N+     W   A V  +A  +F   
Sbjct: 140 LNDAEARNFGINQHLEHDARYDRADEFLEAVKKLWNS-----WDEDALVLDKAAGVF--- 191

Query: 400 TLRAMVSPANADY-DSEEDFVVIRRPLLL---AQGAPAYIPTTADPRGAQ-PGLWSSSM 239
                  PA   Y D   +++ +R PL +    QG P  +     PRG +  G W+ ++
Sbjct: 192 -----ADPAKVHYVDHHGEWLNVRGPLQVPRSPQGEPVILQAGLSPRGRRFAGKWAEAV 245

>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (Fragment)
          Length = 554

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 17/93 (18%)
 Frame = -3

Query: 356 RRRFCGHKEAAASCPRCSSLYPYHGRPKRCPAWPMELID--EAKVW--------IELHKR 207
           R   CGH      C  C S  P HGR  RCP +  ++ D  ++ VW        +EL +R
Sbjct: 27  RLLLCGH----TVCHDCLSRLPLHGRAIRCP-FDRQVTDLGDSGVWGLKKNFALLELLER 81

Query: 206 LHLQHTGSKCSTATVR-------ICVTDDEAHI 129
           L   H G   +            I   +DEAH+
Sbjct: 82  LQNGHIGQYGAAEEALGISGESIIRCDEDEAHV 114

>MTR1A_PIG (O02781) Melatonin receptor type 1A (Mel-1A-R) (Mel1a melatonin|
           receptor) (Fragment)
          Length = 154

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 91  WHITRYDLCTAYMICASSSVTQI--LTVAVLHFDPVCCRCSRLWSSIHTFASSMSS 252
           W+  R  LC  ++IC  + V  +  L +  L +DP    C        TFA S+SS
Sbjct: 13  WYSNRNSLCCVFLICVLTLVAIVPNLCMGTLQYDPRIYSC--------TFAQSVSS 60

>SYN_MYCPN (P75521) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 455

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = -1

Query: 499 ESLVSFVKNNLDLCKWAAVATVATQAFSLFLAMTLRAMVSPANADYDSEEDFVVIRRPLL 320
           E  + F +NN         A +  +A + F  M +R+++S A  DY  + DFV++  P+L
Sbjct: 113 EHSLEFFRNN---------AYLRVRARTYFAIMKVRSLLSQAIFDYFFKNDFVLVHSPIL 163

>IAAC2_WHEAT (P16851) Alpha-amylase/trypsin inhibitor CM2 precursor|
           (Chloroform/methanol-soluble protein CM2)
          Length = 145

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   PGCPND*VADFIQIDRMIGHTNVYSVHYT 89
           PGCP +   DF ++    GH NV +VH T
Sbjct: 109 PGCPREPQRDFAKVLVTPGHCNVMTVHNT 137

>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23)
          Length = 574

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 18/94 (19%)
 Frame = -3

Query: 356 RRRFCGHKEAAASCPRCSSLYPYHGRPKRCPAWPMELID--EAKVW--------IELHKR 207
           R   CGH      C  C +  P HGR  RCP +  ++ D  ++ VW        +EL +R
Sbjct: 47  RLLLCGH----TVCHDCLTRLPLHGRAIRCP-FDRQVTDLGDSGVWGLKKNFALLELLER 101

Query: 206 LHLQHTGS--------KCSTATVRICVTDDEAHI 129
           L   H G           S  ++  C  +DEAH+
Sbjct: 102 LQNGHIGQYGAAEEAIGTSGESIIRC-DEDEAHV 134

>GUAA_DESVH (Q72D86) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 515

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -3

Query: 269 CPAWP-MELIDEAKVWIELHKRLHLQHTGSKC--STATVRICVTDDEAHIIYAV 117
           CP W  ++L   ++VW+    ++     G K    TAT+ +    DEA  IYAV
Sbjct: 116 CPLWDGLDLGTTSRVWMSHGDKVKTPPPGFKVVGRTATLEVAAMADEARRIYAV 169

>REG2_YEAST (P38232) Protein REG2|
          Length = 338

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
 Frame = -1

Query: 556 LLLNEHWIQDLPYDRTGELESLVSFVKNNLDLCKWAAVA--------TVATQAFSLFLAM 401
           ++ +EH+IQ LP  R    +      K+ LD C   A +        +V   + ++    
Sbjct: 179 IITDEHFIQRLPSTRLNSTDEQRPCSKSELDPCIGNAASKRSFYDYNSVYVASDAIITTA 238

Query: 400 TLRAMVSPANADYDSEEDFVVIRRPLLLAQG 308
              A++S  + DY    D   + R +LL  G
Sbjct: 239 AATAIISSNSGDYQRGHDVRDVPRNVLLQAG 269

>ANF1_XENLA (Q91898) Homeobox protein ANF-1 (XANF-1)|
          Length = 187

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 471 LFLTKETRLSSSPVRSYGRSWIQCS 545
           L L K+T ++SSP+  + R WI+CS
Sbjct: 27  LGLDKKTDVASSPIIKHHRPWIECS 51

>IAAC1_WHEAT (P16850) Alpha-amylase/trypsin inhibitor CM1 precursor|
           (Chloroform/methanol-soluble protein CM1)
          Length = 145

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   PGCPND*VADFIQIDRMIGHTNVYSVH 83
           PGCP +   DF ++    GH NV +VH
Sbjct: 109 PGCPREPQRDFAKVLVTSGHCNVMTVH 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,422,441
Number of Sequences: 219361
Number of extensions: 2103344
Number of successful extensions: 6519
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6508
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)