ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61i19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtctt 438 ||||||||||||||||||||||| Sbjct: 63800 atccaatctaaaaacatagtctt 63778
>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence Length = 127131 Score = 44.1 bits (22), Expect = 0.47 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 404 atatctcataaga-tccaatctaaaaacatagtc 436 ||||||||||| | |||||||||||||||||||| Sbjct: 13602 atatctcataaaaatccaatctaaaaacatagtc 13569
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 44.1 bits (22), Expect = 0.47 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 404 atatctcataaga-tccaatctaaaaacatagtc 436 ||||||||||| | |||||||||||||||||||| Sbjct: 24567 atatctcataaaaatccaatctaaaaacatagtc 24600
>emb|BX296521.18| Zebrafish DNA sequence from clone CH211-194E11 in linkage group 7, complete sequence Length = 185817 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 taccaaagccaaaacaggaaat 469 |||||||||||||||||||||| Sbjct: 134107 taccaaagccaaaacaggaaat 134128
>emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 on chromosome 3, complete sequence Length = 107004 Score = 44.1 bits (22), Expect = 0.47 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 404 atatctcataaga-tccaatctaaaaacatagtc 436 ||||||||||| | |||||||||||||||||||| Sbjct: 98710 atatctcataaaaatccaatctaaaaacatagtc 98677
>dbj|AP002345.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2383B20, complete sequence Length = 147359 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 acataacaatatatatttttga 22 |||||||||||||||||||||| Sbjct: 130484 acataacaatatatatttttga 130463
>emb|AL929266.9| Zebrafish DNA sequence from clone CH211-67E16 in linkage group 9, complete sequence Length = 199104 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cataacaatatatatttttgaa 23 |||||||||||||||||||||| Sbjct: 111453 cataacaatatatatttttgaa 111474
>dbj|AP003557.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655C2, complete sequences Length = 184280 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 acataacaatatatatttttga 22 |||||||||||||||||||||| Sbjct: 30596 acataacaatatatatttttga 30575
>emb|BX001058.4| Zebrafish DNA sequence from clone CH211-14I21, complete sequence Length = 209611 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 taccaaagccaaaacaggaaat 469 |||||||||||||||||||||| Sbjct: 198078 taccaaagccaaaacaggaaat 198057
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aaccaccatcatatctcataa 414 ||||||||||||||||||||| Sbjct: 2127143 aaccaccatcatatctcataa 2127123
>gb|AC128668.4| Mus musculus BAC clone RP24-81D14 from chromosome 8, complete sequence Length = 211075 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cctaattaagaagagatggaa 78 ||||||||||||||||||||| Sbjct: 83931 cctaattaagaagagatggaa 83911
>gb|AC122243.3| Mus musculus BAC clone RP23-148C10 from chromosome 17, complete sequence Length = 204584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 aaatactgaaggaaaattcca 368 ||||||||||||||||||||| Sbjct: 106803 aaatactgaaggaaaattcca 106783
>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete sequence Length = 100991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 27910 atccaatctaaaaacatagtc 27890
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 32214 atccaatctaaaaacatagtc 32194
>emb|CR962133.1| Medicago truncatula chromosome 5 clone mth2-17h8, COMPLETE SEQUENCE Length = 114811 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 20442 atccaatctaaaaacatagtc 20422
>gb|AC141923.27| Medicago truncatula clone mth2-7f19, complete sequence Length = 116685 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 648 atccaatctaaaaacatagtc 668
>gb|AC135234.16| Medicago truncatula clone mth2-18a1, complete sequence Length = 107012 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 19260 atccaatctaaaaacatagtc 19280
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 32437 atccaatctaaaaacatagtc 32417
>gb|AC121246.28| Medicago truncatula clone mth2-35m8, complete sequence Length = 124137 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 45658 atccaatctaaaaacatagtc 45638
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 45149 atccaatctaaaaacatagtc 45129 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 26674 atccaatctaaaaacatagtc 26694
>gb|AC144619.3| Medicago truncatula clone mth2-8n3, complete sequence Length = 46630 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 4026 atccaatctaaaaacatagtc 4006
>gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete sequence Length = 133272 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 107406 atccaatctaaaaacatagtc 107426
>gb|AC146562.17| Medicago truncatula clone mth2-14d10, complete sequence Length = 118505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 42683 atccaatctaaaaacatagtc 42703
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 105526 atccaatctaaaaacatagtc 105546
>gb|AC149496.23| Medicago truncatula clone mth2-119c5, complete sequence Length = 115576 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 97016 atccaatctaaaaacatagtc 96996 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 77912 atccaatctaaaaacatagtc 77932
>gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete sequence Length = 136954 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 23032 atccaatctaaaaacatagtc 23012
>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence Length = 104866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 68850 atccaatctaaaaacatagtc 68830 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 66386 atccaatctaaaaacatagtc 66366
>gb|AC151816.17| Medicago truncatula clone mth2-85j22, complete sequence Length = 91918 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 11178 atccaatctaaaaacatagtc 11198
>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence Length = 105045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 80377 atccaatctaaaaacatagtc 80397
>gb|AC126008.36| Medicago truncatula clone mth2-13e5, complete sequence Length = 124889 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 57289 atccaatctaaaaacatagtc 57309 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 4133 atccaatctaaaaacatagtc 4113
>gb|AC124970.21| Medicago truncatula clone mth2-7j19, complete sequence Length = 128254 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 102824 atccaatctaaaaacatagtc 102844
>gb|AC135161.11| Medicago truncatula clone mth2-30k24, complete sequence Length = 88701 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 66928 atccaatctaaaaacatagtc 66948
>gb|AC135798.31| Medicago truncatula clone mth2-31c16, complete sequence Length = 123159 Score = 42.1 bits (21), Expect = 1.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 404 atatctcataaga-tccaatctaaaaacatagt 435 ||||||||||| | ||||||||||||||||||| Sbjct: 43064 atatctcataaaaatccaatctaaaaacatagt 43096
>gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete sequence Length = 134674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 73741 atccaatctaaaaacatagtc 73761
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 128605 atccaatctaaaaacatagtc 128585
>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence Length = 144639 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 92190 atccaatctaaaaacatagtc 92170
>gb|AC138451.15| Medicago truncatula clone mth2-24k1, complete sequence Length = 123909 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 29366 atccaatctaaaaacatagtc 29386
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence Length = 130592 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 70977 atccaatctaaaaacatagtc 70997
>gb|AC139747.15| Medicago truncatula clone mth2-9j10, complete sequence Length = 105246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 3658 atccaatctaaaaacatagtc 3638
>gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete sequence Length = 120077 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 119428 atccaatctaaaaacatagtc 119408
>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence Length = 100985 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 27905 atccaatctaaaaacatagtc 27885
>gb|AC124217.21| Medicago truncatula clone mth2-36d22, complete sequence Length = 133899 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 50838 atccaatctaaaaacatagtc 50818
>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE Length = 119142 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 43786 atccaatctaaaaacatagtc 43806
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 taagaagagatggaagggaag 84 ||||||||||||||||||||| Sbjct: 1201245 taagaagagatggaagggaag 1201265
>gb|AC158172.17| Medicago truncatula clone mth2-143b6, complete sequence Length = 117641 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 23465 atccaatctaaaaacatagtc 23445
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 79410 atccaatctaaaaacatagtc 79430
>gb|AC151529.20| Medicago truncatula clone mth2-7n23, complete sequence Length = 134908 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 95499 atccaatctaaaaacatagtc 95479
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence Length = 123526 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 37259 atccaatctaaaaacatagtc 37279
>gb|AC148219.15| Medicago truncatula clone mth2-21l10, complete sequence Length = 118023 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 27983 atccaatctaaaaacatagtc 28003
>gb|AC157489.18| Medicago truncatula clone mth2-70e3, complete sequence Length = 154580 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 97704 atccaatctaaaaacatagtc 97724
>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence Length = 106058 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 82373 atccaatctaaaaacatagtc 82393
>gb|AC144342.26| Medicago truncatula clone mth2-10n2, complete sequence Length = 145497 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 96259 atccaatctaaaaacatagtc 96239
>gb|AC119409.25| Medicago truncatula clone mth2-10i9, complete sequence Length = 127954 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 27875 atccaatctaaaaacatagtc 27895
>gb|AC099064.2| Homo sapiens chromosome 1 clone RP4-754K5, complete sequence Length = 135547 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 agtaaaaatactgaaggaaaa 363 ||||||||||||||||||||| Sbjct: 62283 agtaaaaatactgaaggaaaa 62263
>gb|AC078871.16| Homo sapiens 12q BAC RP11-919C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119238 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aacaatatatatttttgaatagata 29 |||||||||||||||| |||||||| Sbjct: 88716 aacaatatatatttttaaatagata 88692
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence Length = 212555 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 taagaagagatggaagggaag 84 ||||||||||||||||||||| Sbjct: 129526 taagaagagatggaagggaag 129546
>gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, complete sequence Length = 160837 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 agtaaaaatactgaaggaaaa 363 ||||||||||||||||||||| Sbjct: 137118 agtaaaaatactgaaggaaaa 137098
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 taagaagagatggaagggaag 84 ||||||||||||||||||||| Sbjct: 141950 taagaagagatggaagggaag 141930
>gb|AC157373.3| Medicago truncatula chromosome 7 BAC clone mth2-108g9, complete sequence Length = 95326 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 20317 atccaatctaaaaacatagtc 20297
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 taagaagagatggaagggaag 84 ||||||||||||||||||||| Sbjct: 1201245 taagaagagatggaagggaag 1201265
>emb|AL160231.4|CNS01RGW Human chromosome 14 DNA sequence BAC R-355C3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194173 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aatatatatttttgaatagat 28 ||||||||||||||||||||| Sbjct: 62450 aatatatatttttgaatagat 62430
>gb|AC155884.2| Medicago truncatula chromosome 2 BAC clone mth2-10d10, complete sequence Length = 79222 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 42627 atccaatctaaaaacatagtc 42647 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 40149 atccaatctaaaaacatagtc 40169
>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence Length = 154354 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 aacaatatatatttttgaatagata 29 |||||||||||||||| |||||||| Sbjct: 149569 aacaatatatatttttaaatagata 149545
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 13257 atccaatctaaaaacatagtc 13237 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagtc 436 ||||||||||||||||||||| Sbjct: 10791 atccaatctaaaaacatagtc 10771
>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete sequence Length = 217732 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 aaatactgaaggaaaattcca 368 ||||||||||||||||||||| Sbjct: 211469 aaatactgaaggaaaattcca 211489
>gb|AC125358.4| Mus musculus BAC clone RP23-256E3 from 8, complete sequence Length = 177236 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cctaattaagaagagatggaa 78 ||||||||||||||||||||| Sbjct: 4126 cctaattaagaagagatggaa 4146
>gb|AC158537.2| Mus musculus BAC clone RP23-2H7 from chromosome 14, complete sequence Length = 204554 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 taaaaatactgaaggaaaat 364 |||||||||||||||||||| Sbjct: 185035 taaaaatactgaaggaaaat 185054
>ref|NM_000307.1| Homo sapiens POU domain, class 3, transcription factor 4 (POU3F4), mRNA Length = 1481 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaagagatggaagggaaggg 86 |||||||||||||||||||| Sbjct: 1377 gaagagatggaagggaaggg 1358
>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence Length = 172452 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 acataacaatatatatttttgaat 24 |||||||||||| ||||||||||| Sbjct: 64728 acataacaatatttatttttgaat 64705
>emb|CR354429.17| Zebrafish DNA sequence from clone CH211-150F22 in linkage group 25, complete sequence Length = 178425 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 aacacagtaaaaatactgaa 357 |||||||||||||||||||| Sbjct: 27012 aacacagtaaaaatactgaa 27031
>gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 8 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 agacacactaacagagagat 261 |||||||||||||||||||| Sbjct: 225218 agacacactaacagagagat 225237
>gb|AC130807.30| Medicago truncatula clone mth2-13o20, complete sequence Length = 143832 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 atccaatctaaaaacatagt 435 |||||||||||||||||||| Sbjct: 88422 atccaatctaaaaacatagt 88403
>gb|AC135416.39| Medicago truncatula clone mth2-24n16, complete sequence Length = 126278 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 atccaatctaaaaacatagt 435 |||||||||||||||||||| Sbjct: 88763 atccaatctaaaaacatagt 88782
>emb|Z82170.2|HS326L13 Human DNA sequence from clone RP3-326L13 on chromosome Xq21.1 Contains the POU3F4 gene for POU domain, class 3, transcription factor 4 and two CpG islands, complete sequence Length = 127247 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaagagatggaagggaaggg 86 |||||||||||||||||||| Sbjct: 88427 gaagagatggaagggaaggg 88408
>emb|AL591847.8| Human DNA sequence from clone RP11-510L10 on chromosome 13, complete sequence Length = 171596 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 agacacactaacagagagat 261 |||||||||||||||||||| Sbjct: 105839 agacacactaacagagagat 105858
>emb|AL589988.7| Human DNA sequence from clone RP11-10D13 on chromosome 10 Contains part of the gene for adenovirus 5 E1A binding protein (BS69), complete sequence Length = 74573 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acataacaatatatattttt 20 |||||||||||||||||||| Sbjct: 23875 acataacaatatatattttt 23894
>emb|AL138686.14| Human DNA sequence from clone RP11-189B4 on chromosome 13q14.11-14.3 Contains a protein phosphatase 1 regulatory (inhibitor) subunit 2 (PPP1R2) (IPP2) pseudogene, an olfactory receptor pseudogene, the gene for a novel protein similar to COX17 homolog cytochrome c oxidase assembly protein (yeast) (COX17) and a FK506 binding protein 1A 12kDa (FKBP1A) pseudogene and two novel genes, complete sequence Length = 116524 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aacaatatatatttttgaat 24 |||||||||||||||||||| Sbjct: 24910 aacaatatatatttttgaat 24929
>emb|X82324.1|HSBRN4 H.sapiens Brain 4 mRNA Length = 1481 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gaagagatggaagggaaggg 86 |||||||||||||||||||| Sbjct: 1377 gaagagatggaagggaaggg 1358
>emb|AJ251323.1|FRU251323 Fugu rubripes DNBP gene, MEST gene, COPG2 gene and UCN gene Length = 14280 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ggaaaattccaagcagatct 377 |||||||||||||||||||| Sbjct: 1515 ggaaaattccaagcagatct 1496
>emb|AL772263.12| Zebrafish DNA sequence from clone CH211-160D11 in linkage group 6, complete sequence Length = 153222 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 tttaccaacacaaatgtttg 190 |||||||||||||||||||| Sbjct: 59622 tttaccaacacaaatgtttg 59641
>emb|CR356224.5| Zebrafish DNA sequence from clone DKEY-17P16 in linkage group 12, complete sequence Length = 112893 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 aataccaaagccaaaacaggaaat 469 ||||||||||||||||| |||||| Sbjct: 48686 aataccaaagccaaaactggaaat 48663
>emb|CR388169.7| Zebrafish DNA sequence from clone DKEYP-61H1 in linkage group 3, complete sequence Length = 89582 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 taacaatatatatttttgaataga 27 ||||||||||||||||| |||||| Sbjct: 63575 taacaatatatattttttaataga 63598
>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence Length = 188276 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 aagagatggaagggaagggg 87 |||||||||||||||||||| Sbjct: 161497 aagagatggaagggaagggg 161478
>emb|AL844587.19| Zebrafish DNA sequence from clone DKEY-7E14 in linkage group 12, complete sequence Length = 254964 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 aataccaaagccaaaacaggaaat 469 ||||||||||||||||| |||||| Sbjct: 100168 aataccaaagccaaaactggaaat 100191
>emb|BX005093.22| Zebrafish DNA sequence from clone CH211-210G13 in linkage group 3, complete sequence Length = 155392 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 taccaaagccaaaacaggaa 467 |||||||||||||||||||| Sbjct: 122642 taccaaagccaaaacaggaa 122661
>gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P6, complete sequence Length = 205816 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 catgaaccaccatcatatctcata 413 |||||||||||||||||| ||||| Sbjct: 170321 catgaaccaccatcatatatcata 170298
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 acagtaaaaatactgaagga 360 |||||||||||||||||||| Sbjct: 33997162 acagtaaaaatactgaagga 33997143
>gb|AC068724.7|AC068724 Homo sapiens chromosome 15 clone RP11-473C18 map 15q15, complete sequence Length = 190727 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 aaagccaaaacaggaaatct 471 |||||||||||||||||||| Sbjct: 39884 aaagccaaaacaggaaatct 39865
>gb|AC090572.7| Homo sapiens chromosome 8, clone RP11-386D6, complete sequence Length = 187022 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 catgaaccaccatcatatctcata 413 |||||||||||||||||| ||||| Sbjct: 183064 catgaaccaccatcatatatcata 183087
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 acagtaaaaatactgaagga 360 |||||||||||||||||||| Sbjct: 128605 acagtaaaaatactgaagga 128586
>emb|BX005286.6| Zebrafish DNA sequence from clone DKEY-237I9, complete sequence Length = 178225 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 taagaaatataagacacact 250 |||||||||||||||||||| Sbjct: 82576 taagaaatataagacacact 82595
>emb|BX908393.10| Zebrafish DNA sequence from clone CH211-180H19 in linkage group 18, complete sequence Length = 138757 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 aaaatactgaaggaaaattc 366 |||||||||||||||||||| Sbjct: 92902 aaaatactgaaggaaaattc 92921
>dbj|AK059229.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E02, full insert sequence Length = 1738 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 acagtaaaaatactgaagga 360 |||||||||||||||||||| Sbjct: 1526 acagtaaaaatactgaagga 1545
>gb|AC115822.9| Mus musculus chromosome 18, clone RP23-406D17, complete sequence Length = 160731 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 cataacacagtaaaaatactgaag 358 ||||||||||||||| |||||||| Sbjct: 86302 cataacacagtaaaagtactgaag 86325
>dbj|AP006121.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT16D13, TM0206a, complete sequence Length = 35623 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acaatatatatttttgaata 25 |||||||||||||||||||| Sbjct: 21556 acaatatatatttttgaata 21575
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 taaaaatactgaaggaaaat 364 |||||||||||||||||||| Sbjct: 46011 taaaaatactgaaggaaaat 45992 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,058,118 Number of Sequences: 3902068 Number of extensions: 7058118 Number of successful extensions: 145980 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145577 Number of HSP's gapped (non-prelim): 403 length of query: 542 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 519 effective length of database: 17,143,297,704 effective search space: 8897371508376 effective search space used: 8897371508376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
