Clone Name | rbah61i16 |
---|---|
Clone Library Name | barley_pub |
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase Length = 1800 Score = 1239 bits (625), Expect = 0.0 Identities = 646/653 (98%) Strand = Plus / Minus Query: 1 gggtctttgaaaagcagcatgcagcatatatacacaacacacatcaccggtcaaattcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 gggtctttgaaaagcagcatgcagcatatatacacaacacacatcaccggtcaaattcgg 1632 Query: 61 agtaaaaagctaagccctctcccggcgcaagtgttcgcctccacgatggggcgctcgcac 120 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 1631 agtaaaaagctaagctctctcccggcgcaagtgtccgcctccacgatggggcgctcgctc 1572 Query: 121 gaccacccttcaggccgccttggcaaagccgatacgcagcttgccatagtcaaagacggt 180 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1571 gaccacccttcaggccgccttggcaaagccaatacgcagcttgccgtagtcaaagacggt 1512 Query: 181 gtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggat 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1511 gtggtacgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggat 1452 Query: 241 gtccatggctgtgaatccactgatgcactgggcagcagctccttcaccaaccttcaggat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1451 gtccatggctgtgaatccactgatgcactgggcagcagctccttcaccaaccttcaggat 1392 Query: 301 atactcttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 atactcttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcat 1332 Query: 361 ggatccaaggctgccgcagtccacggctgattctcccatgggacttgggagacggttgca 420 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 ggacccaaggctgccgcagtccacggctgattctcccatgggacttgggagacggttgca 1272 Query: 421 cagctggttaacgtaatctagtatgagatcctgggtcttgttctgtgcaagttggttctg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 cagctggttaacgtaatctagtatgagatcctgggtcttgttctgtgcaagttggttctg 1212 Query: 481 catccatacaacagccatctcacaggcactgcacatgggatcggcacggaggccatttga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 catccatacaacagccatctcacaggcactgcacatgggatcggcacggaggccatttga 1152 Query: 541 tttcacaggttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 tttcacaggttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatc 1092 Query: 601 aaaggtgcacagaccaacctgggagcagatctttttgggctgtgtctctgcta 653 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 aaaggtgcacagaccaacctgggagcagatctttttgggctgtgtctctgcta 1039
>dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic proteinase, complete cds Length = 1527 Score = 880 bits (444), Expect = 0.0 Identities = 504/524 (96%) Strand = Plus / Minus Query: 130 tcaggccgccttggcaaagccgatacgcagcttgccatagtcaaagacggtgtggtatgg 189 ||||||||||||||| ||||||| |||||||||||| ||||| |||||||||||||| || Sbjct: 1527 tcaggccgccttggcgaagccgacacgcagcttgccgtagtcgaagacggtgtggtaggg 1468 Query: 190 gcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatggc 249 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1467 gcccatgaaaacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatggc 1408 Query: 250 tgtgaatccactgatgcactgggcagcagctccttcaccaaccttcaggatatactcttc 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1407 tgtgaatccactgatgcactgggcagcagctccttcgccaaccttcaggatatactcttc 1348 Query: 310 tggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatggatccaag 369 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1347 tggtttcagcgcaaacttcttgccactaatggtgaactcaatgtcaggcatggatccaag 1288 Query: 370 gctgccgcagtccacggctgattctcccatgggacttgggagacggttgcacagctggtt 429 |||| | |||||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1287 gctggcacagtccacagctgattctcccatggggcttggcagacggttgcacagctggtt 1228 Query: 430 aacgtaatctagtatgagatcctgggtcttgttctgtgcaagttggttctgcatccatac 489 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1227 aacgtaatctagtatgagatcctgggtcttgttctgtgcaagttggttctgcatccacac 1168 Query: 490 aacagccatctcacaggcactgcacatgggatcggcacggaggccatttgatttcacagg 549 ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| Sbjct: 1167 aacagccatctcacaggcactgcacatgggatcggtatggaggccattcgatttcacagg 1108 Query: 550 ttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatcaaaggtgca 609 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1107 ctcatcatcgaccacgctccgaattccagcactaacaccacgagtcccatcaaaggtgca 1048 Query: 610 cagaccaacctgggagcagatctttttgggctgtgtctctgcta 653 |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1047 cagaccaacctgggagcagacctttttgggctgtgtctctgcta 1004
>dbj|AK104838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E12, full insert sequence Length = 1777 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1563 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1504 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1503 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1444 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1443 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 1384 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1383 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1324 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1323 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1264 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1263 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1204 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1203 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1144 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1143 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1084 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1083 ctgtgtctc 1075
>dbj|AK103421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K05, full insert sequence Length = 1818 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1564 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1505 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1445 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1444 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 1385 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1384 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1325 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1324 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1265 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1264 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1205 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1204 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1145 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1144 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1085 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1084 ctgtgtctc 1076
>dbj|AK100749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K01, full insert sequence Length = 1086 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 772 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 713 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 653 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 652 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 593 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 592 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 533 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 532 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 473 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 472 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 413 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 412 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 353 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 352 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 293 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 292 ctgtgtctc 284
>dbj|AK098911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H22, full insert sequence Length = 1844 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1566 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1507 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1506 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1447 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1446 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 1387 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1386 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1327 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1326 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1267 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1266 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1207 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1206 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1147 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1146 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1087 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1086 ctgtgtctc 1078
>dbj|AK098906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D14, full insert sequence Length = 1843 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1561 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1502 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1501 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1442 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1441 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 1382 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1381 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1322 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1321 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1262 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1261 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1202 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1201 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1142 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1141 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1082 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1081 ctgtgtctc 1073
>dbj|AK067742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C15, full insert sequence Length = 1869 Score = 438 bits (221), Expect = e-119 Identities = 422/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1564 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1505 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1445 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 1444 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 1385 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1384 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1325 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1324 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1265 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1264 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1205 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1204 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1145 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1144 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1085 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1084 ctgtgtctc 1076
>dbj|AK066453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L24, full insert sequence Length = 2543 Score = 434 bits (219), Expect = e-118 Identities = 408/471 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 2195 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 2136 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2135 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 2076 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||||| ||||| Sbjct: 2075 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttgcctccaat 2016 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 2015 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1956 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1955 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1896 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1895 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1836 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1835 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1776 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagat 630 |||||||||| | |||||||||| || |||||||||||||| |||||||| Sbjct: 1775 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagat 1725
>dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, complete cds Length = 2030 Score = 430 bits (217), Expect = e-117 Identities = 421/489 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 1553 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 1494 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1493 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 1434 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 |||||||||||||||||| |||||||||||||| ||||| |||||||| ||| | ||||| Sbjct: 1433 tccttcaccaaccttcagaatatactcttctggcttcagtgcaaactttttggctccaat 1374 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||||| |||||||| | |||||||||||| Sbjct: 1373 ggtgaatgaaatctcaggcatggatgcaaggctgccacagtccacagatgattctcccat 1314 Query: 400 gggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtctt 459 ||||||||||| || || ||||| |||| ||| | | ||||||||||| ||||| Sbjct: 1313 tggacttgggagcttgtcacagagctgattaatgtagttcaagatgagatcctgagtctt 1254 Query: 460 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacatggg 519 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1253 gttctgtgcaagttggttctgcatccatacaacagccatctcacaggcattgcacatggg 1194 Query: 520 atcggcacggaggccatttgatttcacaggttcatcatcgaccacgctccgaattccggc 579 | | |||| ||||| |||| | ||| ||||||||| || |||||| |||||| || Sbjct: 1193 accactttggagaccattcgattccccagcttcatcatctactacgctcttaattccagc 1134 Query: 580 actaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttggg 639 |||||||||| | |||||||||| || |||||||||||||| |||||||| ||| || Sbjct: 1133 actaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatgg 1074 Query: 640 ctgtgtctc 648 ||||||||| Sbjct: 1073 ctgtgtctc 1065
>gb|AY112455.1| Zea mays CL6331_1 mRNA sequence Length = 1071 Score = 313 bits (158), Expect = 4e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 157 cagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 ||||||||||||||| |||||||||||||| |||||||| || || |||| |||||| Sbjct: 753 cagcttgccatagtcgaagacggtgtggtagactcccatgaaaacatcacccaagatcca 694 Query: 217 gagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagc 276 |||||| || || || || ||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 693 gagagggccacggggtggtgggatatccatagctgtgaatccgctgatgcactgggcagc 634 Query: 277 agctccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccacc 336 |||||||||||||||||| || |||| |||||||||||| ||||| ||||| || Sbjct: 633 ctgtccttcaccaaccttcagaatgtactgctctggtttcagcttgaacttattgcctcc 574 Query: 337 aatggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcc 396 |||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 573 aatggtgaacgcaatgtcaggcatggacgcaagactgccacagtccacggctgattctcc 514 Query: 397 catgggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggt 456 ||| ||||| || ||||| | ||| ||||| |||| ||| | || ||||| ||||| || Sbjct: 513 cattggactcggaagacgctcgcaaagctgattaatgtagttcaggatgagctcctgtgt 454 Query: 457 cttgttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 453 cttgttctgggcaagttggttctgcatccataccacagccatctcacaggcattgcacat 394 Query: 517 gggatc 522 ||||| Sbjct: 393 tggatc 388 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 533 ccatttgatttcacaggttcatcatcgaccacgctccgaattccggcactaacaccacga 592 |||||||||||| ||| ||||||||| || |||||||||||||| || || |||||| || Sbjct: 374 ccatttgatttcccagcttcatcatccactacgctccgaattccagcgctgacaccatga 315 Query: 593 gtcccatcaaaggtgcacagaccaacctgggagcagatctt 633 || |||||||| ||||||||||||||||| || |||||||| Sbjct: 314 gtgccatcaaaagtgcacagaccaacctgagaacagatctt 274
>gb|BT017963.1| Zea mays clone EL01N0523D02.c mRNA sequence Length = 1169 Score = 289 bits (146), Expect = 6e-75 Identities = 311/366 (84%) Strand = Plus / Minus Query: 157 cagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 |||||||||||||||||| |||| | || | |||||||| || || |||| |||||| Sbjct: 848 cagcttgccatagtcaaaaacggggggggagactcccatgaaaacatcacccaagatcca 789 Query: 217 gagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagc 276 |||||| || || || || ||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 788 gagagggccacggggtggtgggatatccatagctgtgaatccgctgatgcactgggcagc 729 Query: 277 agctccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccacc 336 |||||||||||||||||| || |||| |||||||||||| ||||| ||||| || Sbjct: 728 ctgtccttcaccaaccttcagaatgtactgctctggtttcagcttgaacttattgcctcc 669 Query: 337 aatggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcc 396 |||||||||| |||||||||||||||| |||| ||||| |||||||||||||||||||| Sbjct: 668 aatggtgaacgcaatgtcaggcatggacgcaagactgccacagtccacggctgattctcc 609 Query: 397 catgggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggt 456 ||| ||||| || ||||| | ||| ||||| |||| ||| | || ||||| ||||| || Sbjct: 608 cattggactcggaagacgctcgcaaagctgattaatgtagttcaggatgagctcctgtgt 549 Query: 457 cttgttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 548 cttgttctgggcaagttggttctgcatccataccacagccatctcacaggcattgcacat 489 Query: 517 gggatc 522 ||||| Sbjct: 488 tggatc 483 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 533 ccatttgatttcacaggttcatcatcgaccacgctccgaattccggcactaacaccacga 592 |||||||||||| ||| ||||||||| || |||||||||||||| || || |||||| || Sbjct: 469 ccatttgatttcccagcttcatcatccactacgctccgaattccagcgctgacaccatga 410 Query: 593 gtcccatcaaaggtgcacagaccaacctgggagcagatctt 633 || |||||||| ||||||||||||||||| || |||||||| Sbjct: 409 gtgccatcaaaagtgcacagaccaacctgagaacagatctt 369
>ref|NM_192504.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 262 bits (132), Expect = 1e-66 Identities = 300/356 (84%) Strand = Plus / Minus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagaga 220 |||||||||||||| ||||| ||||| | ||||| ||||| ||||||| |||||||||| Sbjct: 1529 ttgccatagtcaaacacggtatggtaggctcccataaagacatctcccaagatccagaga 1470 Query: 221 ggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagct 280 ||||| |||||||| || |||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 1469 ggaccacgaggaggaggaatgtccatagctgtgaatccactgatgcactgggtagcagtt 1410 Query: 281 ccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaatg 340 || ||||||||||||||||| || | ||||||||| || ||||||| |||||||| || Sbjct: 1409 ccctcaccaaccttcaggatgtattgttctggtttgagaacaaacttgttgccaccgatt 1350 Query: 341 gtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccatg 400 ||||| ||||||||||||||||| ||||||||| |||||| || | |||||||||||| Sbjct: 1349 gtgaaggcaatgtcaggcatggatgcaaggctgctgcagtcaacagatgattctcccata 1290 Query: 401 ggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtcttg 460 ||||| || ||||||| || ||||| | || ||| | | || ||||||||| || | Sbjct: 1289 ggactaggaagacggtcacatagctgatcaatgtactgcaatacgagatcctgagtttga 1230 Query: 461 ttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 || |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 1229 ttttgtgcaagttgggtatgcatccatacaacagctgtctcacaagcattgcacat 1174 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 550 ttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatcaaa 603 ||||||||| ||||| |||||||| || |||||||||||| |||| |||||||| Sbjct: 1140 ttcatcatccaccacactccgaataccagcactaacaccatgagtaccatcaaa 1087
>dbj|AK072283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016B15, full insert sequence Length = 1862 Score = 262 bits (132), Expect = 1e-66 Identities = 300/356 (84%) Strand = Plus / Minus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagaga 220 |||||||||||||| ||||| ||||| | ||||| ||||| ||||||| |||||||||| Sbjct: 1654 ttgccatagtcaaacacggtatggtaggctcccataaagacatctcccaagatccagaga 1595 Query: 221 ggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagct 280 ||||| |||||||| || |||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 1594 ggaccacgaggaggaggaatgtccatagctgtgaatccactgatgcactgggtagcagtt 1535 Query: 281 ccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaatg 340 || ||||||||||||||||| || | ||||||||| || ||||||| |||||||| || Sbjct: 1534 ccctcaccaaccttcaggatgtattgttctggtttgagaacaaacttgttgccaccgatt 1475 Query: 341 gtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccatg 400 ||||| ||||||||||||||||| ||||||||| |||||| || | |||||||||||| Sbjct: 1474 gtgaaggcaatgtcaggcatggatgcaaggctgctgcagtcaacagatgattctcccata 1415 Query: 401 ggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtcttg 460 ||||| || ||||||| || ||||| | || ||| | | || ||||||||| || | Sbjct: 1414 ggactaggaagacggtcacatagctgatcaatgtactgcaatacgagatcctgagtttga 1355 Query: 461 ttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 || |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 1354 ttttgtgcaagttgggtatgcatccatacaacagctgtctcacaagcattgcacat 1299 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 550 ttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatcaaa 603 ||||||||| ||||| |||||||| || |||||||||||| |||| |||||||| Sbjct: 1265 ttcatcatccaccacactccgaataccagcactaacaccatgagtaccatcaaa 1212
>dbj|AK072645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B07, full insert sequence Length = 1576 Score = 254 bits (128), Expect = 3e-64 Identities = 299/356 (83%) Strand = Plus / Minus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagaga 220 |||||||||||||| ||||| ||||| | ||||| ||||| ||||||| |||||||||| Sbjct: 1308 ttgccatagtcaaacacggtatggtaggctcccataaagacatctcccaagatccagaga 1249 Query: 221 ggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagct 280 ||||| |||||||| || |||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 1248 ggaccacgaggaggaggaatgtccatagctgtgaatccactgatgcactgggtagcagtt 1189 Query: 281 ccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaatg 340 || ||||||||||||||||| || | ||||||||| || ||||||| |||||||| || Sbjct: 1188 ccctcaccaaccttcaggatgtattgttctggtttgagaacaaacttgttgccaccgatt 1129 Query: 341 gtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccatg 400 ||||| ||||||||||||||||| ||||||||| |||||| || | |||||||||||| Sbjct: 1128 gtgaaggcaatgtcaggcatggatgcaaggctgctgcagtcaacagatgattctcccata 1069 Query: 401 ggacttgggagacggttgcacagctggttaacgtaatctagtatgagatcctgggtcttg 460 ||||| || ||||||| || || || | || ||| | | || ||||||||| || | Sbjct: 1068 ggactaggaagacggtcacatagttgatcaatgtactgcaatacgagatcctgagtttga 1009 Query: 461 ttctgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 || |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 1008 ttttgtgcaagttgggtatgcatccatacaacagctgtctcacaagcattgcacat 953 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 550 ttcatcatcgaccacgctccgaattccggcactaacaccacgagtcccatcaaa 603 ||||||||| ||||| |||||||| || |||||||||||| |||| |||||||| Sbjct: 919 ttcatcatccaccacactccgaataccagcactaacaccatgagtaccatcaaa 866
>gb|AF285164.1| Oryza sativa subsp. japonica aspartic protease mRNA, partial cds Length = 562 Score = 236 bits (119), Expect = 7e-59 Identities = 218/251 (86%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||| ||||| || ||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 327 cttgccgtagtcgaacacggtatggtaggcacccatgaaaacgtcacccaggatccagag 268 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagc 279 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 aggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggcagcagc 208 Query: 280 tccttcaccaaccttcaggatatactcttctggtttcagcgcaaacttcttgccaccaat 339 | ||| |||||||||||| |||||||||||||| ||||| |||||||| ||| | |||| Sbjct: 207 ttctttaccaaccttcagaatatactcttctggcttcagtgcaaactttttggcttcaat 148 Query: 340 ggtgaactcaatgtcaggcatggatccaaggctgccgcagtccacggctgattctcccat 399 |||||| ||| |||||||||||| |||||||| | |||||||| | ||| ||| |||| Sbjct: 147 ggtgaatgaaatctcaggcatggatgcaaggctggcacagtccacagatgaatcttccat 88 Query: 400 gggacttggga 410 |||||||||| Sbjct: 87 tggacttggga 77 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 443 atgagatcctgggtcttgttctgtgcaagttggttctgcatcc 485 ||||||||||| |||||| ||||||||||| ||||||| |||| Sbjct: 44 atgagatcctgagtcttggtctgtgcaagtgggttctggatcc 2
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 214 ccagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggc 273 |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96701 ccagagaggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggc 96642 Query: 274 agcagctccttcaccaaccttcaggatatact 305 |||||||||||||||||||||||| ||||||| Sbjct: 96641 agcagctccttcaccaaccttcagaatatact 96610 Score = 139 bits (70), Expect = 1e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 443 atgagatcctgggtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 502 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 atgagatcctgagtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 96170 Query: 503 caggcactgcacatggga 520 |||||| ||||||||||| Sbjct: 96169 caggcattgcacatggga 96152 Score = 111 bits (56), Expect = 3e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 304 ctcttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatgga 363 ||||||||| ||||| |||||||| ||||| ||||||||||| ||| ||||||||||| Sbjct: 96451 ctcttctggcttcagtgcaaactttttgcctccaatggtgaatgaaatctcaggcatgga 96392 Query: 364 tccaaggctgccgcagtccacggctgattctcccatgggacttgggag 411 | |||||||||| |||||||| | |||||||||||| ||||||||||| Sbjct: 96391 tgcaaggctgccacagtccacagatgattctcccattggacttgggag 96344 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 581 ctaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggc 640 ||||||||| | |||||||||| || |||||||||||||| |||||||| ||| ||| Sbjct: 95916 ctaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatggc 95857 Query: 641 tgtgtct 647 ||||||| Sbjct: 95856 tgtgtct 95850
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 214 ccagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggc 273 |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28016536 ccagagaggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggc 28016477 Query: 274 agcagctccttcaccaaccttcaggatatact 305 |||||||||||||||||||||||| ||||||| Sbjct: 28016476 agcagctccttcaccaaccttcagaatatact 28016445 Score = 139 bits (70), Expect = 1e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 443 atgagatcctgggtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 502 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28016064 atgagatcctgagtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 28016005 Query: 503 caggcactgcacatggga 520 |||||| ||||||||||| Sbjct: 28016004 caggcattgcacatggga 28015987 Score = 111 bits (56), Expect = 3e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 304 ctcttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatgga 363 ||||||||| ||||| |||||||| ||||| ||||||||||| ||| ||||||||||| Sbjct: 28016286 ctcttctggcttcagtgcaaactttttgcctccaatggtgaatgaaatctcaggcatgga 28016227 Query: 364 tccaaggctgccgcagtccacggctgattctcccatgggacttgggag 411 | |||||||||| |||||||| | |||||||||||| ||||||||||| Sbjct: 28016226 tgcaaggctgccacagtccacagatgattctcccattggacttgggag 28016179 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 581 ctaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggc 640 ||||||||| | |||||||||| || |||||||||||||| |||||||| ||| ||| Sbjct: 28015751 ctaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatggc 28015692 Query: 641 tgtgtct 647 ||||||| Sbjct: 28015691 tgtgtct 28015685 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 ||||||| ||||| ||||||||||||||||| Sbjct: 2117417 tggttctctatccacacaacagccatctcaca 2117386
>dbj|D32165.1|RICAP Rice gene for aspartic protease, complete cds Length = 6782 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 214 ccagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggc 273 |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6065 ccagagaggaccacggggaggagggatgtccatggctgtgaatccactgatgcactgggc 6006 Query: 274 agcagctccttcaccaaccttcaggatatact 305 |||||||||||||||||||||||| ||||||| Sbjct: 6005 agcagctccttcaccaaccttcagaatatact 5974 Score = 139 bits (70), Expect = 1e-29 Identities = 76/78 (97%) Strand = Plus / Minus Query: 443 atgagatcctgggtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 502 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5593 atgagatcctgagtcttgttctgtgcaagttggttctgcatccatacaacagccatctca 5534 Query: 503 caggcactgcacatggga 520 |||||| ||||||||||| Sbjct: 5533 caggcattgcacatggga 5516 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Minus Query: 304 ctcttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatgga 363 ||||||||| ||||| |||||||| ||| | ||||||||||| ||| ||||||||||| Sbjct: 5815 ctcttctggcttcagtgcaaactttttggctccaatggtgaatgaaatctcaggcatgga 5756 Query: 364 tccaaggctgccgcagtccacggctgattctcccatgggacttgggag 411 | |||||||||| |||||||| | |||||||||||| ||||||||||| Sbjct: 5755 tgcaaggctgccacagtccacagatgattctcccattggacttgggag 5708 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 581 ctaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggc 640 ||||||||| | |||||||||| || |||||||||||||| |||||||| ||| ||| Sbjct: 5280 ctaacaccatgcttcccatcaaaagtacacagaccaacctgagagcagatttttgatggc 5221 Query: 641 tgtgtct 647 ||||||| Sbjct: 5220 tgtgtct 5214
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 214 ccagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggc 273 |||||||||||| |||||||| || |||||||| ||||||||||||||||||||||||| Sbjct: 27079661 ccagagaggaccacgaggaggaggaatgtccatagctgtgaatccactgatgcactgggt 27079720 Query: 274 agcagctccttcaccaaccttcaggatatact 305 ||||| ||| ||||||||||||||||| |||| Sbjct: 27079721 agcagttccctcaccaaccttcaggatgtact 27079752 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 307 ttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatggatcc 366 ||||||||| || ||||||| |||||||| || ||||| ||||||||||||||||| | Sbjct: 27080543 ttctggtttgagaacaaacttgttgccaccgattgtgaaggcaatgtcaggcatggatgc 27080602 Query: 367 aaggctgccgcagtccacggctgattctcccatgggacttgggagacggt 416 |||||||| |||||| || | |||||||||||| ||||| || ||||||| Sbjct: 27080603 aaggctgctgcagtcaacagatgattctcccataggactaggaagacggt 27080652 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 464 tgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 27080778 tgtgcaagttgggtatgcatccatacaacagctgtctcacaagcattgcacat 27080830 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 |||||||||||||| ||||| ||||| | ||||| ||||| ||||||| ||||| Sbjct: 27079293 ttgccatagtcaaacacggtatggtaggctcccataaagacatctcccaagatcc 27079347
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 214 ccagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggc 273 |||||||||||| |||||||| || |||||||| ||||||||||||||||||||||||| Sbjct: 138492 ccagagaggaccacgaggaggaggaatgtccatagctgtgaatccactgatgcactgggt 138551 Query: 274 agcagctccttcaccaaccttcaggatatact 305 ||||| ||| ||||||||||||||||| |||| Sbjct: 138552 agcagttccctcaccaaccttcaggatgtact 138583 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 307 ttctggtttcagcgcaaacttcttgccaccaatggtgaactcaatgtcaggcatggatcc 366 ||||||||| || ||||||| |||||||| || ||||| ||||||||||||||||| | Sbjct: 139374 ttctggtttgagaacaaacttgttgccaccgattgtgaaggcaatgtcaggcatggatgc 139433 Query: 367 aaggctgccgcagtccacggctgattctcccatgggacttgggagacggt 416 |||||||| |||||| || | |||||||||||| ||||| || ||||||| Sbjct: 139434 aaggctgctgcagtcaacagatgattctcccataggactaggaagacggt 139483 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 464 tgtgcaagttggttctgcatccatacaacagccatctcacaggcactgcacat 516 |||||||||||| | ||||||||||||||||| ||||||| ||| ||||||| Sbjct: 139609 tgtgcaagttgggtatgcatccatacaacagctgtctcacaagcattgcacat 139661 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 |||||||||||||| ||||| ||||| | ||||| ||||| ||||||| ||||| Sbjct: 138124 ttgccatagtcaaacacggtatggtaggctcccataaagacatctcccaagatcc 138178
>dbj|AB002695.1| Pumpkin mRNA for aspartic endopeptidase, complete cds Length = 1776 Score = 105 bits (53), Expect = 2e-19 Identities = 131/157 (83%) Strand = Plus / Minus Query: 157 cagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 |||||||||| | ||||||||||||||||| | ||||||||||| ||||||| |||||| Sbjct: 1593 cagcttgccaaaatcaaagacggtgtggtagcgacccatgaagacatctcccaagatcca 1534 Query: 217 gagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagc 276 ||| || || |||||||| ||||| || | || || |||||||| |||||||| || | Sbjct: 1533 gaggggtccacgaggaggagggatatcaaatgcagtaaatccacttatgcactgagctac 1474 Query: 277 agctccttcaccaaccttcaggatatactcttctggt 313 || || ||||||||||| || ||||||||||||||| Sbjct: 1473 aggaccctcaccaaccttgagtatatactcttctggt 1437
>emb|AJ313385.1|TCA313385 Theobroma cacao mRNA for aspartic proteinase (ap2 gene) Length = 1828 Score = 93.7 bits (47), Expect = 7e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 170 tcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcga 229 ||||||||||||||||| | |||||||||| |||||||| ||||||||||| || ||| Sbjct: 1566 tcaaagacggtgtggtagcgacccatgaagatatctcccagaatccagagaggtccacga 1507 Query: 230 ggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcacca 289 ||||| || || |||| || || || |||||||||||||| || ||| |||||||| Sbjct: 1506 ggaggaggaatatccaaagcagtaaagccactgatgcactgtgcttcagaaccttcaccc 1447 Query: 290 accttcaggatatactcttctgg 312 ||||| || |||||||||||||| Sbjct: 1446 accttgagaatatactcttctgg 1424 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 472 ttggttctgcatccatacaacagccatctcaca 504 ||||||||||||||| ||||| ||||||||||| Sbjct: 1264 ttggttctgcatccacacaactgccatctcaca 1232
>emb|Y09123.1|CCY09123 C.calcitrapa mRNA for aspartic proteinase Length = 1721 Score = 83.8 bits (42), Expect = 7e-13 Identities = 129/158 (81%) Strand = Plus / Minus Query: 155 cgcagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatc 214 |||| ||||||||| || || ||||| |||||| | ||||| || || ||||||| |||| Sbjct: 1539 cgcaacttgccataatcgaacacggtatggtattgacccataaaaacatctcccaagatc 1480 Query: 215 cagagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggca 274 || ||||| || |||||||| | || ||||| |||||||||||||||||||| || || Sbjct: 1479 catagaggtccacgaggaggggcgacatccatagctgtgaatccactgatgcattgtgcg 1420 Query: 275 gcagctccttcaccaaccttcaggatatactcttctgg 312 || |||| ||||||| |||||||| |||| |||||| Sbjct: 1419 gcttctccctcaccaattttcaggatgtactgttctgg 1382
>gb|BT013775.1| Lycopersicon esculentum clone 132663F, mRNA sequence Length = 1929 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 447 gatcctgggtcttgttctgtgcaagttggttctgcatccatacaacagccatctcaca 504 ||||||| |||| ||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct: 1417 gatcctgagtctggttctgtctaagttggttctgcatccatacaactgccatttcaca 1360 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 584 acaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctt 633 ||||| ||||| |||||||||||||||| |||||||| || |||||||| Sbjct: 1283 acacctcgagttccatcaaaggtgcacaacccaacctgtgaacagatctt 1234
>emb|AJ313384.1|TCA313384 Theobroma cacao mRNA for aspartic proteinase (ap1 gene) Length = 1784 Score = 67.9 bits (34), Expect = 4e-08 Identities = 121/150 (80%) Strand = Plus / Minus Query: 156 gcagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 |||| |||||||||||||| || || ||| | ||||||| |||||||| |||| ||||| Sbjct: 1581 gcaggttgccatagtcaaatactgtatggaactggcccataaagacgtcgcccaagatcc 1522 Query: 216 agagaggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcag 275 ||||||| || |||||||| || | |||| || ||||||||||||| ||| || || Sbjct: 1521 agagaggtccacgaggaggtggcacatccagagcagtgaatccactgaggcattgagcta 1462 Query: 276 cagctccttcaccaaccttcaggatatact 305 || |||| ||||| || ||||||| ||||| Sbjct: 1461 catctccctcacccactttcaggacatact 1432
>ref|NM_101062.2| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT1G11910 mRNA, complete cds Length = 1898 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1532 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1473 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1472 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1413 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1412 caactttcagaacatactcttctgg 1388 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1223 tctggatccacacaacagccatctcaca 1196
>gb|AY063974.1| Arabidopsis thaliana putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1830 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1532 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1473 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1472 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1413 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1412 caactttcagaacatactcttctgg 1388 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1223 tctggatccacacaacagccatctcaca 1196
>gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1820 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1532 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1473 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1472 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1413 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1412 caactttcagaacatactcttctgg 1388 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1223 tctggatccacacaacagccatctcaca 1196
>gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1874 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1532 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1473 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1472 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1413 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1412 caactttcagaacatactcttctgg 1388 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1223 tctggatccacacaacagccatctcaca 1196
>dbj|AK221098.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL22-84-P18 Length = 721 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 428 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 369 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 368 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 309 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 308 caactttcagaacatactcttctgg 284 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 119 tctggatccacacaacagccatctcaca 92
>dbj|AK221202.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL23-06-J05 Length = 1039 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 656 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 597 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 596 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 537 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 536 caactttcagaacatactcttctgg 512 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 347 tctggatccacacaacagccatctcaca 320
>gb|AY088657.1| Arabidopsis thaliana clone 8972 mRNA, complete sequence Length = 1814 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1532 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1473 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1472 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1413 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1412 caactttcagaacatactcttctgg 1388 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1223 tctggatccacacaacagccatctcaca 1196
>gb|AF287258.1| Vigna unguiculata aspartic proteinase gene, complete cds Length = 7087 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 583 aacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggctg 642 ||||||||||||||||||||||||||||| |||| || || |||||||| || ||||| Sbjct: 4847 aacaccacgagtcccatcaaaggtgcacaatccaatttgagaacagatcttcttcggctg 4788 Query: 643 tgtct 647 ||||| Sbjct: 4787 tgtct 4783 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||| ||| ||||| ||||||||||| Sbjct: 5070 tggttctgcacccaaacaaccgccatctcaca 5039
>gb|BT001980.1| Arabidopsis thaliana clone U11602 putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1552 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1483 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1424 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1423 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1364 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1363 caactttcagaacatactcttctgg 1339 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1174 tctggatccacacaacagccatctcaca 1147
>gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteinase mRNA, partial cds Length = 1722 Score = 65.9 bits (33), Expect = 2e-07 Identities = 117/145 (80%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| || | Sbjct: 1424 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatccagagaggtccac 1365 Query: 228 gaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttcac 287 |||| || | | ||| | || | || |||||||||||||| || ||| ||| |||| Sbjct: 1364 gaggtggagcaacgtcaagagcaataaaaccactgatgcactgtgccacaggtccctcac 1305 Query: 288 caaccttcaggatatactcttctgg 312 |||| ||||| | |||||||||||| Sbjct: 1304 caactttcagaacatactcttctgg 1280 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 1115 tctggatccacacaacagccatctcaca 1088
>dbj|AB045892.1| Nepenthes alata NaAP2 mRNA for aspartic proteinase 2, complete cds Length = 1839 Score = 65.9 bits (33), Expect = 2e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 167 tagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccg 226 ||||| || |||||||||||| | |||||||| | |||||||| ||||||||| || || Sbjct: 1574 tagtcgaacacggtgtggtattgacccatgaaaatgtctcccaagatccagaggggtcca 1515 Query: 227 cgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctccttca 286 |||||||| | ||||| | ||| |||||||||| ||||| || |||||| | ||||| Sbjct: 1514 cgaggaggggcaatgtctaaagctatgaatccactaatgcattgtgcagcaacaccttcg 1455 Query: 287 ccaac 291 ||||| Sbjct: 1454 ccaac 1450
>gb|AY792822.1| Sus scrofa cathepsin D protein mRNA, partial cds Length = 1894 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 acggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggc 235 ||||||| ||| |||| ||||| |||||||||||||||||||| || |||| || ||| Sbjct: 1136 acggtgtagtagcggccgatgaaaacgtctcccaggatccagagcggcccgccgggcggc 1077 Query: 236 gggatgtccatg 247 |||||||||||| Sbjct: 1076 gggatgtccatg 1065
>emb|X88774.1|BORNAPAP B.oleracea mRNA for putative aspartic protease (partial) Length = 431 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 ||||||| |||||||||||| ||||||||| || ||||| |||||||||||||| || | Sbjct: 238 agtcaaacacggtgtggtatttgcccatgaacacatctccaaggatccagagaggtccac 179 Query: 228 gagg 231 |||| Sbjct: 178 gagg 175
>emb|X81984.1|CCCYPRSN C.cardunculus mRNA for cyprosin Length = 1757 Score = 63.9 bits (32), Expect = 6e-07 Identities = 89/108 (82%) Strand = Plus / Minus Query: 160 cttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 ||||||||| || || || ||||||||| ||||||| || || ||||||| |||||| || Sbjct: 1550 cttgccataatcgaacaccgtgtggtatcggcccataaaaacatctcccaagatccatag 1491 Query: 220 aggaccgcgaggaggcgggatgtccatggctgtgaatccactgatgca 267 ||| || |||||||| | | ||||| || ||||||||||||||||| Sbjct: 1490 aggtccacgaggaggggccacatccatagcagtgaatccactgatgca 1443
>gb|DQ018729.1|DQ018728S2 Sus scrofa cathepsin D (CTSD) gene, exons 7 through 9 and partial cds Length = 1274 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 acggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggc 235 ||||||| ||| |||| ||||| |||||||||||||||||||| || |||| || ||| Sbjct: 535 acggtgtagtagcggccgatgaaaacgtctcccaggatccagagcggcccgccgggcggc 476 Query: 236 gggatgtccatg 247 |||||||||||| Sbjct: 475 gggatgtccatg 464
>gb|DQ018727.1| Sus scrofa cathepsin D mRNA, complete cds Length = 2032 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 acggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggc 235 ||||||| ||| |||| ||||| |||||||||||||||||||| || |||| || ||| Sbjct: 1274 acggtgtagtagcggccgatgaaaacgtctcccaggatccagagcggcccgccgggcggc 1215 Query: 236 gggatgtccatg 247 |||||||||||| Sbjct: 1214 gggatgtccatg 1203
>ref|NM_001037721.1| Sus scrofa cathepsin D (CTSD), mRNA Length = 2032 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 176 acggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggc 235 ||||||| ||| |||| ||||| |||||||||||||||||||| || |||| || ||| Sbjct: 1274 acggtgtagtagcggccgatgaaaacgtctcccaggatccagagcggcccgccgggcggc 1215 Query: 236 gggatgtccatg 247 |||||||||||| Sbjct: 1214 gggatgtccatg 1203
>gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic protease precursor mRNA, complete cds Length = 1740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagga 223 |||||||||||||| ||||| || || |||||||| || ||||| || ||||| |||||| Sbjct: 1505 ccatagtcaaagacagtgtgatacggccccatgaatacatctccaagaatccaaagagga 1446 Query: 224 ccgcgagg 231 |||||||| Sbjct: 1445 ccgcgagg 1438 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcacaggcactgcaca 515 ||||| |||||||| ||||| ||||||||||||||| |||||| Sbjct: 1196 tggttttgcatccaaacaactgccatctcacaggcagtgcaca 1154
>ref|NM_205177.1| Gallus gallus cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 1448 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 ||||||||| |||| ||| ||||| |||||||| ||||||||||||||||| Sbjct: 1283 gtcaaagacagtgtagtaggggccaatgaagacatctcccaggatccagag 1233
>gb|BT020155.1| Homo sapiens cathepsin D (lysosomal aspartyl protease) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>ref|NM_001909.3| Homo sapiens cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 2205 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1307 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1249
>gb|BC001574.1| Homo sapiens cathepsin D (lysosomal aspartyl peptidase), mRNA (cDNA clone IMAGE:3455250) Length = 1494 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 646 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 588
>gb|BC016320.2| Homo sapiens cathepsin D (lysosomal aspartyl peptidase), mRNA (cDNA clone MGC:2311 IMAGE:3506977), complete cds Length = 2117 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1219 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1161
>emb|X77260.1|BOASPR B. oleracea L. gene for aspartic protease (partial) Length = 1121 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagg 222 ||||||| |||||||||||| ||||||||| || ||||||| |||||||||||| Sbjct: 841 agtcaaacacggtgtggtatttgcccatgaatacatctcccaagatccagagagg 787 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 257 ccactgatgcactgggcagcagctccttcaccaaccttcaggatatactc 306 |||||||||||||| || ||||| || |||||||||||||| | |||||| Sbjct: 752 ccactgatgcactgtgctgcagcgccctcaccaaccttcagaacatactc 703 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 596 ccatcaaaggtgcacagaccaacctgggagcagat 630 ||||| || ||||||||||||| |||||||||||| Sbjct: 413 ccatcgaaagtgcacagaccaatctgggagcagat 379
>emb|X05344.1|HSCATDC Human mRNA for cathepsin D from oestrogen responsive breast cancer cells Length = 1988 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1176 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1118
>emb|CR456947.1| Homo sapiens full open reading frame cDNA clone RZPDo834E1218D for gene CTSD, cathepsin D (lysosomal aspartyl protease); complete cds, incl. stopcodon Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|BT007637.1| Synthetic construct Homo sapiens cathepsin D (lysosomal aspartyl protease) mRNA, partial cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|BT006910.1| Homo sapiens cathepsin D (lysosomal aspartyl protease) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>emb|CR858646.1| Pongo pygmaeus mRNA; cDNA DKFZp469J0315 (from clone DKFZp469J0315) Length = 2023 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1191 ggccgatgaagacgtcgcccaggatccagagtggtccgctgggtggcgggatgtccatg 1133
>emb|CR623521.1| full-length cDNA clone CS0DI064YA16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2032 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1255 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1197
>emb|CR613410.1| full-length cDNA clone CS0DE003YB18 of Placenta of Homo sapiens (human) Length = 2061 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1273 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1215
>emb|CR612133.1| full-length cDNA clone CS0DF002YC21 of Fetal brain of Homo sapiens (human) Length = 2006 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1213 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1155
>emb|CR609839.1| full-length cDNA clone CS0DI057YH09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2026 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1280 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1222
>emb|CR597228.1| full-length cDNA clone CS0DN004YA05 of Adult brain of Homo sapiens (human) Length = 2051 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1273 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1215
>gb|U61396.2| Vigna unguiculata aspartic proteinase mRNA, complete cds Length = 1842 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 583 aacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggctg 642 ||||||||||||||||||||||||||||| |||| || || |||||||| || ||||| Sbjct: 1212 aacaccacgagtcccatcaaaggtgcacaatccaatttgagaacagatcttcttcggctg 1153 Query: 643 tgt 645 ||| Sbjct: 1152 tgt 1150 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 185 tatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggagg 234 ||||| |||||||||||||| || |||||||||||||| || |||||||| Sbjct: 1610 tatggccccatgaagacgtccccaaggatccagagagggccacgaggagg 1561 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||| ||| ||||| ||||||||||| Sbjct: 1322 tggttctgcacccaaacaaccgccatctcaca 1291
>dbj|AB169854.1| Macaca fascicularis brain cDNA, clone: QccE-11243, similar to human cathepsin D (lysosomal aspartyl protease) (CTSD), mRNA, RefSeq: NM_001909.3 Length = 2199 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1311 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1253
>gb|S49650.1| prepro-cathepsin D [chickens, follicles, mRNA, 1448 nt] Length = 1448 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 ||||||||| |||| ||| ||||| |||||||| ||||||||||||||||| Sbjct: 1283 gtcaaagacagtgtagtaggggccaatgaagacatctcccaggatccagag 1233
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 53774 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 53716
>gb|AY892734.1| Synthetic construct Homo sapiens clone FLH024310.01L cathepsin D (CTSD) mRNA, partial cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|AY890251.1| Synthetic construct Homo sapiens clone FLH024315.01X cathepsin D (CTSD) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|AY890417.1| Synthetic construct Homo sapiens clone FLH031241.01X cathepsin D (CTSD) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|AY888315.1| Synthetic construct Homo sapiens clone FLH008539.01X cathepsin D (CTSD) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>dbj|AK130178.1| Homo sapiens cDNA FLJ26668 fis, clone MPG03026, highly similar to Cathepsin D precursor (EC 3.4.23.5) Length = 1906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1199 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1141
>gb|AY893487.1| Synthetic construct Homo sapiens clone FLH127809.01X cathepsin D (CTSD) mRNA, complete cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|AY892880.1| Synthetic construct Homo sapiens clone FLH031237.01L cathepsin D (CTSD) mRNA, partial cds Length = 1239 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1174 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1116
>gb|AC160647.1| Gallus gallus BAC clone CH261-14N23 from chromosome unknown, complete sequence Length = 237526 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 ||||||||| |||| ||| ||||| |||||||| ||||||||||||||||| Sbjct: 132663 gtcaaagacagtgtagtaggggccaatgaagacatctcccaggatccagag 132613
>gb|M11233.1|HUMCTHD Human cathepsin D mRNA, complete cds Length = 2038 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 1225 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 1167
>gb|M63138.1|HUMCATD5 Human cathepsin D (catD) gene, exons 7, 8, and 9 Length = 2062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 189 ggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||| ||||||||||| |||||||||||||| || |||| || ||||||||||||||| Sbjct: 820 ggccgatgaagacgtcgcccaggatccagagtggcccgctgggtggcgggatgtccatg 762
>ref|NM_001025621.1| Canis familiaris cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 1524 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||||||| || ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 1232 atgaagacatcacccaggatccagagaggcccgccaggtggggggatgtccatg 1179
>ref|XM_863994.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 2 (CTSD), mRNA Length = 1907 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1185 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1132
>ref|XM_609913.2| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 1 (CTSD), mRNA Length = 1901 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1179 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1126
>ref|XM_871709.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 5 (CTSD), mRNA Length = 1919 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1197 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1144
>ref|XM_871611.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 4 (CTSD), mRNA Length = 1910 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1188 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1135
>ref|XM_871531.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 3 (CTSD), mRNA Length = 1955 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1233 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1180
>emb|AM048627.1| Canis familiaris mRNA for cathepsin D (ctsd gene) Length = 1524 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 |||||||| || ||||||||||||||||| |||| ||| || |||||||||||| Sbjct: 1232 atgaagacatcacccaggatccagagaggcccgccaggtggggggatgtccatg 1179
>emb|X69193.1|VCCYNA V.cardunculus mRNA for cynarase Length = 1603 Score = 60.0 bits (30), Expect = 1e-05 Identities = 114/142 (80%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagga 223 ||||||||||| || || |||||| | ||||| || || ||||||| |||||| ||||| Sbjct: 1393 ccatagtcaaacaccgtatggtattgacccataaaaacatctcccaagatccatagaggt 1334 Query: 224 ccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctcct 283 || ||||||| | | |||||||| ||||||||||| ||||| || || | |||||| Sbjct: 1333 ccatgaggaggtgccacatccatggcggtgaatccacttatgcattgtgctgttgctcct 1274 Query: 284 tcaccaaccttcaggatatact 305 || ||||| ||||||| ||||| Sbjct: 1273 tccccaactttcaggacatact 1252
>dbj|AB055312.1| Bos taurus cat-D mRNA for cathepsin D, partial cds Length = 1578 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||||||||| |||||||||||||| || |||| ||| || |||||||||||| Sbjct: 1092 atgaagacgtcgcccaggatccagagcggcccgccaggcggggggatgtccatg 1039
>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds Length = 1560 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 176 acggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgaggaggc 235 ||||||||||| | |||||||||||| || || || |||||||||||||| || || ||| Sbjct: 1473 acggtgtggtaagcgcccatgaagacatccccaagaatccagagaggaccacgtgggggc 1414 Query: 236 gggatgtc 243 || ||||| Sbjct: 1413 ggtatgtc 1406 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcacaggcactgcacat 516 ||||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 1176 tggttctctatccacacaacagccatctcacaggctgtgcacat 1133
>dbj|AB091762.1| Glycine max soyAP4 mRNA for aspartic proteinase 4, partial cds Length = 664 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 581 ctaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatcttttt 636 ||||||||| |||||||||||||||| |||| |||| || |||||||||||||| Sbjct: 60 ctaacaccatgagtcccatcaaaggtacacaatccaatttgtgagcagatcttttt 5 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 157 cagcttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 |||||| ||||| ||||||| ||||| || | ||||||||||| ||||| |||||||| Sbjct: 484 cagcttaccataatcaaagattgtgtgataacgccccatgaagacatctccaaggatcca 425 Query: 217 gagaggaccgcgaggagg 234 ||||| || |||||||| Sbjct: 424 tagagggccacgaggagg 407 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||||||| | ||||||||||||||| Sbjct: 168 tggttctgcatccaaataacagccatctcaca 137
>gb|AF082029.1|AF082029 Hemerocallis hybrid cultivar senescence-associated protein 4 (SA4) mRNA, complete cds Length = 1970 Score = 56.0 bits (28), Expect = 2e-04 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 239 atgtccatggctgtgaatccact-gatgcactgggcagcagctccttcaccaaccttcag 297 ||||||| ||| ||||||||||| ||| ||||| || |||| ||||||||||||||||| Sbjct: 1502 atgtccaaggcagtgaatccacttgatacactgagctgcaggtccttcaccaaccttcaa 1443 Query: 298 gatatactcttctggtttcagcgcaaacttcttgccaccaatggtgaa 345 | ||||| |||| | | || |||||| |||||||||||| ||||| Sbjct: 1442 aacatactgctctgctgtaaggtcaaactgcttgccaccaatagtgaa 1395 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 479 tgcatccatacaacagccatctcacaggcactgcacat 516 |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 1261 tgcatccacacaactgccatctcacaagcactgcacat 1224 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 587 ccacgagtcccatcaaaggtgcacagaccaa 617 ||||||||||||||||| || |||||||||| Sbjct: 1159 ccacgagtcccatcaaaagtacacagaccaa 1129
>gb|AY672651.1| Solanum tuberosum Asp mRNA, complete cds Length = 1680 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagga 223 |||||||| || || |||||||| || |||||||| || ||||| || ||||| |||||| Sbjct: 1458 ccatagtcgaacacagtgtggtacggccccatgaatacatctccaagaatccaaagagga 1399 Query: 224 ccgcgagg 231 |||||||| Sbjct: 1398 ccgcgagg 1391 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcacaggcactgca 513 ||||| |||||||| ||||| ||||||||||||||| |||| Sbjct: 1149 tggttttgcatccaaacaactgccatctcacaggcagtgca 1109
>gb|DQ241852.1| Solanum tuberosum clone 188C11 aspartic protease precursor-like mRNA, complete cds Length = 1764 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagga 223 ||||||||||| || ||||| || || |||||||| || ||||| || ||||| |||||| Sbjct: 1511 ccatagtcaaacacagtgtgatacggccccatgaatacatctccaagaatccaaagagga 1452 Query: 224 ccgcgagg 231 |||||||| Sbjct: 1451 ccgcgagg 1444 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcacaggcactgca 513 ||||| |||||||| ||||| ||||||||||||||| |||| Sbjct: 1202 tggttttgcatccaaacaactgccatctcacaggcagtgca 1162
>gb|AY389666.1| Hyacinthus orientalis aspartic proteinase mRNA, partial cds Length = 585 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 193 catgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatggctgt 252 ||||||||| || |||| |||||||||||||| || || ||||| | |||| ||| || Sbjct: 364 catgaagacatcacccaaaatccagagaggaccccgcggtggcggtacatccaaggccgt 305 Query: 253 gaatccactgatgcactgggcagcagctccttcaccaac 291 |||||| |||||||| || || |||||||| || ||||| Sbjct: 304 gaatccgctgatgcattgtgctgcagctccctccccaac 266
>ref|NM_213873.1| Sus scrofa pepsin (LOC396892), mRNA Length = 1398 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||||||||||| ||| ||| ||||||||||| |||||||||||||| Sbjct: 1194 gtcaaagacggtgtagtactggcggatgaagacgtcacccaggatccagag 1144
>dbj|AB091763.1| Glycine max soyAP5 mRNA for aspartic proteinase 5, partial cds Length = 636 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 161 ttgccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagaga 220 ||||||||||||||||||||||| ||| | |||||| || || || || ||||||||| Sbjct: 497 ttgccatagtcaaagacggtgtgatataccctcatgaaaacatccccaagaatccagaga 438 Query: 221 ggaccgcgaggaggcgggatgtc 243 ||||| || ||||| || ||||| Sbjct: 437 ggaccccgtggaggaggaatgtc 415
>gb|J04601.1|PIGPEPA Pig pepsinogen A mRNA, complete cds Length = 1363 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||||||||||| ||| ||| ||||||||||| |||||||||||||| Sbjct: 1155 gtcaaagacggtgtagtactggcggatgaagacgtcacccaggatccagag 1105
>gb|M20920.1|PIGPEP Swine pepsinogen A mRNA, complete cds Length = 1398 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 169 gtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagag 219 |||||||||||||| ||| ||| ||||||||||| |||||||||||||| Sbjct: 1194 gtcaaagacggtgtagtactggcggatgaagacgtcacccaggatccagag 1144
>gb|AF156788.1| Pleuronectes americanus pepsinogen A form IIb precursor (pep2b) mRNA, complete cds Length = 1280 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||||||||||||||||||||| Sbjct: 1099 atgaagacgtctcccaggatccagag 1074
>dbj|AB120129.1| Paralichthys olivaceus pep mRNA for pepsinogen, complete cds Length = 1307 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||||||||||||||||||||| Sbjct: 1104 atgaagacgtctcccaggatccagag 1079
>dbj|AB045891.1| Nepenthes alata NaAP1 mRNA for aspartic proteinase 1, complete cds Length = 1802 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagagga 223 ||||||||||| || ||||| || | |||||||| | |||||||| |||||||||||| Sbjct: 1599 ccatagtcaaacacagtgtgatactgacccatgaaaatgtctcccaagatccagagaggt 1540 Query: 224 ccgcgaggaggcgggatgtccatggctgtgaatccactgatgcactgggcagcagctcct 283 || ||||||| | | ||| | ||||||||| || |||||||| || | ||| ||||| Sbjct: 1539 ccaagaggaggggccacgtctaaggctgtgaagccgctgatgcattgagttgcaactcct 1480 Query: 284 tcaccaaccttcaggatatact 305 || ||||| | |||||||||| Sbjct: 1479 tcgccaacttgaaggatatact 1458 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 596 ccatcaaaggtgcacagaccaacctgggagcagatctttttgggctgtgtctctg 650 ||||||||||| || | ||||| ||| |||||||||||||| || || ||||||| Sbjct: 1167 ccatcaaaggtacataaaccaatctgcgagcagatcttttttggttgagtctctg 1113 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 479 tgcatccatacaacagccatctcaca 504 |||||||||||||||| ||||||||| Sbjct: 1284 tgcatccatacaacagtcatctcaca 1259
>ref|NM_116684.3| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT4G04460 mRNA, complete cds Length = 1712 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 gtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgagg 231 ||||||||||| |||||||||| || |||| |||||||||||| || ||||| Sbjct: 1535 gtgtggtatggtcccatgaagatatcacccaagatccagagaggtccacgagg 1483
>dbj|AK221179.1| Arabidopsis thaliana mRNA for putative aspartic protease, complete cds, clone: RAFL22-98-B11 Length = 536 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 gtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgagg 231 ||||||||||| |||||||||| || |||| |||||||||||| || ||||| Sbjct: 355 gtgtggtatggtcccatgaagatatcacccaagatccagagaggtccacgagg 303
>gb|AF372974.1|AF372974 Arabidopsis thaliana AT4g04460/T26N6_7 mRNA, complete cds Length = 1677 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 gtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgagg 231 ||||||||||| |||||||||| || |||| |||||||||||| || ||||| Sbjct: 1519 gtgtggtatggtcccatgaagatatcacccaagatccagagaggtccacgagg 1467
>emb|BX827174.1|CNS0A2UE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1688 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 gtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgagg 231 ||||||||||| |||||||||| || |||| |||||||||||| || ||||| Sbjct: 1535 gtgtggtatggtcccatgaagatatcacccaagatccagagaggtccacgagg 1483
>emb|BX829292.1|CNS0A2OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1593 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 179 gtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgcgagg 231 ||||||||||| |||||||||| || |||| |||||||||||| || ||||| Sbjct: 1486 gtgtggtatggtcccatgaagatatcacccaagatccagagaggtccacgagg 1434
>dbj|AB025359.2| Helianthus annuus mRNA for aspartic proteinase, complete cds Length = 1722 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 469 aagttggttctgcatccatacaacagccatctcacag 505 ||||||| | |||||||| |||||||||||||||||| Sbjct: 1207 aagttggctttgcatccaaacaacagccatctcacag 1171
>emb|CR662614.2|CNS0FA8S Tetraodon nigroviridis full-length cDNA Length = 629 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 173 aagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 |||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 244 aagacggtgtagtactgaccgatgaagacgtctcccaggatcca 201
>emb|CR660862.2|CNS0F8W4 Tetraodon nigroviridis full-length cDNA Length = 626 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 173 aagacggtgtggtatgggcccatgaagacgtctcccaggatcca 216 |||||||||| ||| | || ||||||||||||||||||||||| Sbjct: 245 aagacggtgtagtactgaccgatgaagacgtctcccaggatcca 202
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence Length = 122876 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||||||| ||||| ||||||||||| Sbjct: 120271 tggttctgcatccaaacaactgccatctcaca 120302 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 170 tcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 |||||||| |||||||| |||||||||||| ||||| ||||||| Sbjct: 115443 tcaaagactgtgtggtaacggcccatgaagatatctccaaggatcc 115488
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence Length = 133030 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||||||| ||||| ||||||||||| Sbjct: 1435 tggttctgcatccaaacaactgccatctcaca 1404 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Minus Query: 170 tcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 |||||||| |||||||| |||||||||||| ||||| ||||||| Sbjct: 6263 tcaaagactgtgtggtaacggcccatgaagatatctccaaggatcc 6218
>dbj|AB069959.1| Glycine max soyAP1 mRNA for aspartic proteinase 1, complete cds Length = 1719 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||||||| ||||| ||||||||||| Sbjct: 1202 tggttctgcatccaaacaaccgccatctcaca 1171 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagagg 222 ||||||||||| || || |||||||||||||| Sbjct: 1484 cccatgaagacatcaccaaggatccagagagg 1453
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 ||||||| |||||||||||| ||||||||| || ||||||| ||||| Sbjct: 97468 agtcaaatacggtgtggtatttgcccatgaacacatctcccaagatcc 97421 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 477 tctgcatccatacaacagccatctcaca 504 |||| ||||| ||||||||||||||||| Sbjct: 96886 tctggatccacacaacagccatctcaca 96859
>gb|U55032.1|BNU55032 Brassica napus aspartic protease gene, complete cds Length = 5381 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatcc 215 ||||||| |||||||||||| ||||||||| || ||||| ||||||| Sbjct: 4813 agtcaaacacggtgtggtatttgcccatgaacacatctccaaggatcc 4766 Score = 40.1 bits (20), Expect = 8.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 596 ccatcaaaggtgcacagaccaacctgggagcagatctttttgggctgtgtct 647 ||||| || ||||||||||||| ||| |||||||| || || ||||| |||| Sbjct: 4001 ccatcgaaagtgcacagaccaatctgcgagcagattttcttcggctgggtct 3950
>emb|AJ550951.1|TBE550951 Trematomus bernacchii mRNA for pepsin A3 Length = 1298 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatcca 216 ||||||||||||||||||||||| Sbjct: 1098 atgaagacgtctcccaggatcca 1076
>gb|AY103665.1| Zea mays PCO108960 mRNA sequence Length = 1413 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggacc 225 |||||||||||||| || || |||||||||||||| Sbjct: 1062 cccatgaagacgtccccaagaatccagagaggacc 1028 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 419 cacagctggttaacgtaatctagtatgagatcctgggtcttgtt 462 |||||||||||| |||| | |||||||| |||| ||||||||| Sbjct: 834 cacagctggttagcgtactgcagtatgagctccttggtcttgtt 791
>ref|XM_475576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggaccgcg 228 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1430 cccatgaagacatctccaagaatccaaagaggaccgcg 1393 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 ||||||| ||||| ||||||||||||||||| Sbjct: 1148 tggttctctatccacacaacagccatctcaca 1117
>gb|BT018637.1| Zea mays clone EL01N0504C03.d mRNA sequence Length = 1568 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 atccagagaggaccgcgaggaggcgg 237 |||||||||||||| ||||||||||| Sbjct: 1198 atccagagaggaccacgaggaggcgg 1173
>ref|XM_545694.2| PREDICTED: Canis familiaris similar to cathepsin E isoform a preproprotein (LOC488577), mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtc 243 |||||||| || ||||||||||||||||| ||| |||||| ||||||| Sbjct: 1220 atgaagacatcgcccaggatccagagaggcccggctggaggctggatgtc 1171
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 335 ccaatggtgaactcaatgtcag 356 |||||||||||||||||||||| Sbjct: 96054 ccaatggtgaactcaatgtcag 96033
>emb|AL450337.24| Human DNA sequence from clone RP11-51B10 on chromosome 10 Contains the 5' end of the PARD3 gene for par-3 partitioning defective 3 homolog (C.elegans), a novel gene, a pseudogene similar to part of synovial sarcoma translocation, chromosome 18 protein (SS18), a peroxiredoxin 2 (PRDX2) pseudogene and a CpG island, complete sequence Length = 173987 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 242 tccatggctgtgaatccactgatgca 267 ||||||| |||||||||||||||||| Sbjct: 124262 tccatggatgtgaatccactgatgca 124237
>emb|AJ550949.2|TBE550949 Trematomus bernacchii mRNA for pepsin A1 Length = 1270 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||| ||||||||||||||||| Sbjct: 1066 atgaagacatctcccaggatccagag 1041
>emb|AJ550950.1|TBE550950 Trematomus bernacchii partial mRNA for pepsin A2 Length = 1259 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||| ||||||||||||||||| Sbjct: 1059 atgaagacatctcccaggatccagag 1034
>ref|NM_205054.1| Gallus gallus pepsinogen (LOC395926), mRNA Length = 1276 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||||||||||| ||||||||| Sbjct: 1104 atgaagacgtctcccaagatccagag 1079
>gb|AF164143.1|AF164143 Ovis aries cathepsin D (CTSD) mRNA, partial cds Length = 1095 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatg 247 ||||| ||||| |||||||||||||| || |||| || || |||||||||||| Sbjct: 1088 atgaacacgtcgcccaggatccagagcggcccgccgggcggggggatgtccatg 1035
>dbj|AK065206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F13, full insert sequence Length = 1900 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggaccgcg 228 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1582 cccatgaagacatctccaagaatccaaagaggaccgcg 1545 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 ||||||| ||||| ||||||||||||||||| Sbjct: 1300 tggttctctatccacacaacagccatctcaca 1269
>gb|AY103982.1| Zea mays PCO140262 mRNA sequence Length = 1929 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 212 atccagagaggaccgcgaggaggcgg 237 |||||||||||||| ||||||||||| Sbjct: 1573 atccagagaggaccacgaggaggcgg 1548 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 476 ttctgcatccatacaacagccatctcaca 504 ||||| ||||| ||||||||||||||||| Sbjct: 1309 ttctgtatccagacaacagccatctcaca 1281
>emb|AJ131678.1|CDR131678 Camelus dromedarius mRNA for pepsin Length = 1221 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1134 atgaagacgtcacccaggatccagag 1109
>dbj|D12777.1|RICASPPRO Oryza sativa (japonica cultivar-group) mRNA for aspartic proteinase, complete cds Length = 1774 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggaccgcg 228 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 1511 cccatgaagacatctccaagaatccaaagaggaccgcg 1474 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 ||||||| ||||| ||||||||||||||||| Sbjct: 1229 tggttctctatccacacaacagccatctcaca 1198
>dbj|AB089792.1| Oryctolagus cuniculus mRNA for pepsinogen III, complete cds Length = 1364 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1124 atgaagacgtcacccaggatccagag 1099
>dbj|AB089791.1| Oryctolagus cuniculus mRNA for pepsinogen II-4, complete cds Length = 1268 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1134 atgaagacgtcacccaggatccagag 1109
>dbj|AB089790.1| Oryctolagus cuniculus mRNA for pepsinogen II-1, complete cds Length = 1454 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1225 atgaagacgtcacccaggatccagag 1200
>gb|M59237.1|RABPEPIII Rabbit pepsinogen III mRNA, complete cds Length = 1371 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1129 atgaagacgtcacccaggatccagag 1104
>gb|M59235.1|RABPEPII23 Rabbit pepsinogen 11-2/3 mRNA, complete cds Length = 1266 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1132 atgaagacgtcacccaggatccagag 1107
>dbj|D00215.1|CHKPSN Gallus gallus mRNA for pepsinogen, complete cds Length = 1276 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 |||||||||||||||| ||||||||| Sbjct: 1104 atgaagacgtctcccaagatccagag 1079
>dbj|AB045893.1| Nepenthes alata NaAP3 mRNA for aspartic proteinase 3, complete cds Length = 1753 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 581 ctaacaccacgagtcccatcaaaggtgcacagaccaacctgggagcagat 630 |||||||| ||||| ||||| |||||||||| |||| ||||||||||| Sbjct: 1078 ctaacaccgcgagtgccatcgaaggtgcacaatccaatttgggagcagat 1029
>dbj|AB028888.1| Oryza sativa RAP mRNA for aspartic proteinase, partial cds Length = 492 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggaccgcg 228 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 218 cccatgaagacatctccaagaatccaaagaggaccgcg 181
>dbj|AB047245.1| Rhinolophus ferrumequinum pgnA mRNA for pepsinogen A, complete cds Length = 1161 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1097 atgaagacgtcgcccaggatccagag 1072
>dbj|AB047244.1| Sorex unguiculatus pgnA mRNA for pepsinogen A, complete cds Length = 1381 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1122 atgaagacgtcgcccaggatccagag 1097
>dbj|AB047243.1| Suncus murinus pgnA mRNA for pepsinogen A, complete cds Length = 1362 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagag 219 ||||||||||| |||||||||||||| Sbjct: 1169 atgaagacgtcacccaggatccagag 1144
>ref|NM_104909.3| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT1G62290 transcript variant AT1G62290.1 mRNA, complete cds Length = 1792 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 |||||||||| ||||||||| ||||| || || ||||| || ||||||||||| || | Sbjct: 1558 agtcaaagacagtgtggtattttcccataaacacatctccaagtatccagagaggtccac 1499 Query: 228 gaggaggcgggat 240 |||| || ||||| Sbjct: 1498 gaggtggagggat 1486
>ref|NM_001036142.1| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT1G62290 transcript variant AT1G62290.2 mRNA, complete cds Length = 1762 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 |||||||||| ||||||||| ||||| || || ||||| || ||||||||||| || | Sbjct: 1528 agtcaaagacagtgtggtattttcccataaacacatctccaagtatccagagaggtccac 1469 Query: 228 gaggaggcgggat 240 |||| || ||||| Sbjct: 1468 gaggtggagggat 1456
>gb|AE009004.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 30 of 256 of the complete sequence Length = 11521 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcacgaccacccttcaggccg 137 ||||||||||||||||||||| Sbjct: 10672 gcacgaccacccttcaggccg 10652
>ref|XM_657624.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5112.2), mRNA Length = 2349 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 218 agaggaccgcgaggaggcggg 238 ||||||||||||||||||||| Sbjct: 2247 agaggaccgcgaggaggcggg 2267
>emb|AL603831.23| Human DNA sequence from clone RP11-486H9 on chromosome 10 Contains the 3' end of the gene for adenovirus 5 E1A binding protein (BS69), the gene for a novel protein (KIAA0934) and four CpG islands, complete sequence Length = 179755 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cagcatatatacacaacacac 42 ||||||||||||||||||||| Sbjct: 54099 cagcatatatacacaacacac 54119
>emb|AL365502.57| Human DNA sequence from clone RP11-48C7 on chromosome 9q34.2-34.3 Contains the gene for nasal embryonic luteinizing hormone-releasing hormone factor (DKFZP586J1624), a novel gene (FLJ31318), the MRPL41 gene for mitochondrial ribosomal protein L41 (RPML27, MRP-L270), a novel gene (LOC9271), the gene for melanin-concentrating hormone receptor 1 interacting zinc-finger protein (ZMYND17) (MIZIP), a novel gene (MGC40555), a novel protein and eleven CpG islands, complete sequence Length = 174995 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ccatgaagacgtctcccagga 212 ||||||||||||||||||||| Sbjct: 15785 ccatgaagacgtctcccagga 15805
>emb|AL118509.9|HSJ770C23 Human DNA sequence from clone RP4-770C23 on chromosome 20 Contains part of the C20orf23 gene for a novel protein similar to KIF1 type and other kinesin-like proteins, complete sequence Length = 81487 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 tatgagatcctgggtcttgtt 462 ||||||||||||||||||||| Sbjct: 13775 tatgagatcctgggtcttgtt 13755
>gb|AY142687.1| Arabidopsis thaliana putative aspartic protease (At1g62290) mRNA, complete cds Length = 1573 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 |||||||||| ||||||||| ||||| || || ||||| || ||||||||||| || | Sbjct: 1504 agtcaaagacagtgtggtattttcccataaacacatctccaagtatccagagaggtccac 1445 Query: 228 gaggaggcgggat 240 |||| || ||||| Sbjct: 1444 gaggtggagggat 1432
>gb|AY070453.1| Arabidopsis thaliana putative aspartic protease (At1g62290) mRNA, complete cds Length = 1778 Score = 42.1 bits (21), Expect = 2.3 Identities = 60/73 (82%) Strand = Plus / Minus Query: 168 agtcaaagacggtgtggtatgggcccatgaagacgtctcccaggatccagagaggaccgc 227 |||||||||| ||||||||| ||||| || || ||||| || ||||||||||| || | Sbjct: 1529 agtcaaagacagtgtggtattttcccataaacacatctccaagtatccagagaggtccac 1470 Query: 228 gaggaggcgggat 240 |||| || ||||| Sbjct: 1469 gaggtggagggat 1457
>emb|AJ009838.1|PSI9838 Podarcis sicula mRNA for ovarian Cathepsin D Length = 1442 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagagg 222 |||||||| |||||||||||||| ||||| Sbjct: 1268 atgaagacatctcccaggatccaaagagg 1240
>emb|AL832856.1|HSM804167 Homo sapiens mRNA; cDNA DKFZp667P1625 (from clone DKFZp667P1625) Length = 5327 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ccatgaagacgtctcccagga 212 ||||||||||||||||||||| Sbjct: 4335 ccatgaagacgtctcccagga 4315
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 gcacgaccacccttcaggccg 137 ||||||||||||||||||||| Sbjct: 327821 gcacgaccacccttcaggccg 327801
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 atatatacacaacacacatca 46 ||||||||||||||||||||| Sbjct: 2859077 atatatacacaacacacatca 2859097
>dbj|AB070857.2| Glycine max soyAP2 mRNA for aspartic proteinase 2, complete cds Length = 1759 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 ccatagtcaaagacggtgtggtatg 188 |||||||||||||||||||| |||| Sbjct: 1595 ccatagtcaaagacggtgtgatatg 1571
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 atatatacacaacacacatca 46 ||||||||||||||||||||| Sbjct: 29364 atatatacacaacacacatca 29384
>dbj|AK024443.1| Homo sapiens mRNA for FLJ00033 protein, partial cds Length = 4150 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ccatgaagacgtctcccagga 212 ||||||||||||||||||||| Sbjct: 3176 ccatgaagacgtctcccagga 3156
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gtcttgttctgtgcaagttgg 475 ||||||||||||||||||||| Sbjct: 2791025 gtcttgttctgtgcaagttgg 2791045
>dbj|AB021787.1| Pyrus pyrifolia PPFRU11 mRNA for aspartic endopeptidase, partial cds Length = 1028 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 584 acaccacgagtcccatcaaaggtgcacagaccaacctgggagcagatctttttgggctgt 643 ||||||||||| |||||||| || || | ||||| || ||||||||||||| ||| ||| Sbjct: 368 acaccacgagttccatcaaaagtacagaaaccaatttgagagcagatcttttggggttgt 309 Query: 644 g 644 | Sbjct: 308 g 308
>gb|AY826351.2| Fagopyrum esculentum aspartic proteinase 9 mRNA, complete cds Length = 1900 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 191 cccatgaagacgtctcccaggatccagagaggaccgcgaggagg 234 |||||||||| ||| |||| |||||||||||||| || ||||| Sbjct: 1597 cccatgaagatgtcgcccaatatccagagaggaccacgtggagg 1554
>gb|AE017139.1| Yersinia pestis biovar Medievalis str. 91001 section 13 of 16 of the complete genome Length = 294253 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tatacacaacacacatcacc 48 |||||||||||||||||||| Sbjct: 284374 tatacacaacacacatcacc 284355
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cgcctccacgatggggcgct 115 |||||||||||||||||||| Sbjct: 288303 cgcctccacgatggggcgct 288284
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tatacacaacacacatcacc 48 |||||||||||||||||||| Sbjct: 4255647 tatacacaacacacatcacc 4255666
>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence Length = 177206 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gatgcactgggcagcagctc 281 |||||||||||||||||||| Sbjct: 119877 gatgcactgggcagcagctc 119896
>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete sequence Length = 213704 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 tgtgcaagttggttctgcat 483 |||||||||||||||||||| Sbjct: 6905 tgtgcaagttggttctgcat 6886
>gb|AC123938.3| Mus musculus BAC clone RP23-412I12 from chromosome 8, complete sequence Length = 193352 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catatatacacaacacacat 44 |||||||||||||||||||| Sbjct: 5837 catatatacacaacacacat 5818
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catatatacacaacacacat 44 |||||||||||||||||||| Sbjct: 8973 catatatacacaacacacat 8992
>gb|AC161500.4| Mus musculus chromosome 7, clone RP23-145H5, complete sequence Length = 223833 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 629 atctttttgggctgtgtctctgct 652 ||||||||||||| |||||||||| Sbjct: 109441 atctttttgggctctgtctctgct 109418
>emb|AL389888.8| Human DNA sequence from clone RP11-389K14 on chromosome 9 Contains two olfactory receptor pseudogenes and the 3' end of a novel gene, complete sequence Length = 202874 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 agcagcatgcagcatatatacaca 36 ||||| |||||||||||||||||| Sbjct: 168294 agcaggatgcagcatatatacaca 168271
>emb|AL359641.10| Human DNA sequence from clone RP11-402K9 on chromosome Xq21.32-22.2 Contains a novel pseudogene and a laminin receptor 1 (ribosomal protein SA,67kDa) (LAMR1) pseudogene, complete sequence Length = 175132 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 catttgatttcacaggttca 553 |||||||||||||||||||| Sbjct: 129064 catttgatttcacaggttca 129083
>emb|AL110503.2|HSJ1100I6 Human DNA sequence from clone RP5-1100I6 on chromosome 20 Contains a novel gene, a novel gene (FLJ33581) and a CpG island, complete sequence Length = 161525 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ctgcatccatacaacagcca 497 |||||||||||||||||||| Sbjct: 24289 ctgcatccatacaacagcca 24270
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tatacacaacacacatcacc 48 |||||||||||||||||||| Sbjct: 4589305 tatacacaacacacatcacc 4589286
>emb|AJ414160.1| Yersinia pestis strain CO92 complete genome; segment 20/20 Length = 203728 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tatacacaacacacatcacc 48 |||||||||||||||||||| Sbjct: 63478 tatacacaacacacatcacc 63459
>gb|AC092211.7| Oryza sativa chromosome 10 P0031G09 genomic sequence, complete sequence Length = 17072 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gctgtgaatccactgatgca 267 |||||||||||||||||||| Sbjct: 12155 gctgtgaatccactgatgca 12136
>gb|AC153567.6| Mus musculus 10 BAC RP23-187C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226945 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggtctttgaaaagcagcatg 21 |||||||||||||||||||| Sbjct: 222625 ggtctttgaaaagcagcatg 222644
>gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, complete sequence Length = 172738 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 gccatctcacaggcactgcacatg 517 |||| ||||||||||||||||||| Sbjct: 163502 gccacctcacaggcactgcacatg 163525
>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane protein homolog, and Myb-related protein genes, complete cds; and unknown gene Length = 33178 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tctttgaaaagcagcatgca 23 |||||||||||||||||||| Sbjct: 5386 tctttgaaaagcagcatgca 5367
>gb|AC110785.2| Homo sapiens BAC clone RP11-455I7 from 4, complete sequence Length = 100987 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 catttgatttcacaggttca 553 |||||||||||||||||||| Sbjct: 34079 catttgatttcacaggttca 34098
>gb|AC027328.4| Homo sapiens chromosome 5 clone CTD-2136J7, complete sequence Length = 88303 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 494 gccatctcacaggcactgcacatg 517 |||| ||||||||||||||||||| Sbjct: 83972 gccacctcacaggcactgcacatg 83949
>gb|AF259982.1|AF259982 Ipomoea batatas putative aspartic protease mRNA, complete cds Length = 1565 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 |||||||||| ||| | ||||||||||||||| Sbjct: 1212 tggttctgcaaccaaataacagccatctcaca 1181
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcatgcagcatatatacaca 36 |||||||||||||||||||| Sbjct: 19532023 gcatgcagcatatatacaca 19532004
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tctttgaaaagcagcatgca 23 |||||||||||||||||||| Sbjct: 379557 tctttgaaaagcagcatgca 379538
>emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02, complete sequence Length = 122499 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcatgcagcatatatacaca 36 |||||||||||||||||||| Sbjct: 52670 gcatgcagcatatatacaca 52651
>gb|AC159380.8| Mus musculus 10 BAC RP24-460M18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196877 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggtctttgaaaagcagcatg 21 |||||||||||||||||||| Sbjct: 7462 ggtctttgaaaagcagcatg 7481
>dbj|AB080684.1| Xenopus laevis CE1 mRNA for cathepsin E1, complete cd Length = 1604 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 tctcccaggatccagagagg 222 |||||||||||||||||||| Sbjct: 1124 tctcccaggatccagagagg 1105
>gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome 14, complete sequence Length = 164697 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 catatatacacaacacacat 44 |||||||||||||||||||| Sbjct: 55258 catatatacacaacacacat 55277
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tctttgaaaagcagcatgca 23 |||||||||||||||||||| Sbjct: 89510 tctttgaaaagcagcatgca 89491
>dbj|AB028607.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13N2 Length = 77483 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcatgcagcatatatacaca 36 |||||||||||||||||||| Sbjct: 56273 gcatgcagcatatatacaca 56292
>gb|AC002087.1|HSAC002087 Human BAC clone GS1-113D4 from 5p15.2, complete sequence Length = 154028 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 494 gccatctcacaggcactgcacatg 517 |||| ||||||||||||||||||| Sbjct: 141237 gccacctcacaggcactgcacatg 141260
>gb|AC138272.11| Mus musculus chromosome 7, clone RP23-91H13, complete sequence Length = 234237 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 atctttttgggctgtgtctctgct 652 ||||||||||||| |||||||||| Sbjct: 191529 atctttttgggctctgtctctgct 191552
>gb|AY961419.1| Phytophthora infestans clone PB005D3 aspartic protease mRNA, complete cds Length = 1312 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 catgaagacgtctcccaggatcca 216 |||||||||||| ||||||||||| Sbjct: 1126 catgaagacgtcgcccaggatcca 1103
>gb|AC107453.14| Mus musculus chromosome 15, clone RP23-315F3, complete sequence Length = 193381 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 catatatacacaacacacat 44 |||||||||||||||||||| Sbjct: 38488 catatatacacaacacacat 38469
>gb|AF036319.1|AF036319 Sparus aurata cathepsin D mRNA, complete cds Length = 1837 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 194 atgaagacgtctcccaggatccagagaggaccgcgaggaggcgggatgtccatggc 249 ||||| || |||||||||||||| || || || |||||| |||||||||||||| Sbjct: 1211 atgaatacatctcccaggatccacagggggcctgcaggaggagggatgtccatggc 1156
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 473 tggttctgcatccatacaacagccatctcaca 504 ||||||| ||||| ||||||||||||||||| Sbjct: 84258 tggttctctatccacacaacagccatctcaca 84227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,147,331 Number of Sequences: 3902068 Number of extensions: 5147331 Number of successful extensions: 105383 Number of sequences better than 10.0: 188 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 104776 Number of HSP's gapped (non-prelim): 603 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)