Clone Name | rbah61i12 |
---|---|
Clone Library Name | barley_pub |
>DHAA_RHILO (Q98C03) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 309 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = -1 Query: 226 IIFVRQVWYAELRFHGSMR--SRIHGLLFLAIINFLQHWDSFH 104 ++ V Q W L FH + R R+ GL F+ I + W+ FH Sbjct: 104 VLLVAQDWGTALAFHLAARRPQRVLGLAFMEFIRPFERWEDFH 146
>TRUA_BUCAI (P57295) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 266 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +3 Query: 138 IAKKRRPWIRDRIEP*NLSSAYQTCLTKMMYRFVVSHLKHYFL 266 I+KK+ WI+D +E + S A T K +Y V + H+ L Sbjct: 213 ISKKKEYWIKDLLEKKDRSHAGATAPAKGLYLVYVEYPLHFNL 255
>UL92_EBV (P03223) Protein BDLF4| Length = 225 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +3 Query: 153 RPWIRDRIEP*NLSSAYQTCLTKMMYRFVVSHLKHYFLN 269 RPW R + + ++ + + + VV+HL HYFLN Sbjct: 88 RPWTEIRQDTQDQRDKWEPEQVQGLVKTVVNHLYHYFLN 126
>ITB1_BOVIN (P53712) Integrin beta-1 (Fibronectin receptor beta subunit)| (Integrin VLA-4 beta subunit) (CD29 antigen) (Fragment) Length = 773 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -2 Query: 381 QLCQKNYDCQCSIARHGPQRFFGPTTELC 295 Q+C C+C + +F GPT E+C Sbjct: 582 QICNGRGVCECGACKCTDPKFQGPTCEMC 610
>ITB1_CHICK (P07228) Integrin beta-1 precursor (CSAT antigen) (JG22 antigen)| (RGD-receptor) Length = 803 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = -2 Query: 381 QLCQKNYDCQCSIARHGPQRFFGPTTELC 295 Q+C C+C +F GPT E+C Sbjct: 610 QICNGRGTCECGTCNCTDPKFQGPTCEMC 638
>ITB1_FELCA (P53713) Integrin beta-1 precursor (Fibronectin receptor beta| subunit) (Integrin VLA-4 beta subunit) (CD29 antigen) Length = 798 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -2 Query: 381 QLCQKNYDCQCSIARHGPQRFFGPTTELC 295 Q+C C+C + +F GPT E+C Sbjct: 605 QICNGRGICECGACKCTDPKFQGPTCEMC 633
>MRAW_MANSM (Q65RX8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 322 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +3 Query: 285 KTSSTALWWDQKTVEDRAWRLNTGNHNSFGK 377 K S A W Q T ED AW L T F K Sbjct: 137 KGLSAAQWLQQVTEEDLAWVLKTFGEERFAK 167
>DHAA_BRAJA (P59337) Haloalkane dehalogenase (EC 3.8.1.5)| Length = 310 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = -1 Query: 238 TNLYIIFVRQVWYAELRFHGSMRSR--IHGLLFLAIINFLQHWDSFHCIQI 92 T+ Y+ V Q W L FH + R + GL F+ I + W FH ++ Sbjct: 95 TSAYL--VAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEV 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,722,837 Number of Sequences: 219361 Number of extensions: 988703 Number of successful extensions: 2218 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2195 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2218 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)