Clone Name | rbah61i11 |
---|---|
Clone Library Name | barley_pub |
>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor| Length = 354 Score = 265 bits (677), Expect = 1e-70 Identities = 131/152 (86%), Positives = 141/152 (92%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKAL Sbjct: 204 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKAL 263 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DMN AED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR Sbjct: 264 DMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 323 Query: 325 PNGIDGTLKNVTPALHPEMILAATNNADIVDA 230 PN +DGT+ V+PAL E ++A+ ++ ++VDA Sbjct: 324 PNAVDGTIPEVSPALREEFVIASKDD-EVVDA 354
>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor| Length = 356 Score = 258 bits (658), Expect = 2e-68 Identities = 128/152 (84%), Positives = 139/152 (91%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI+ VPGMKAL Sbjct: 208 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKAL 267 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DMN+AEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+ Sbjct: 268 DMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 327 Query: 325 PNGIDGTLKNVTPALHPEMILAATNNADIVDA 230 PN +DGT +HPE+ILAA ++A+ DA Sbjct: 328 PNALDGT---YVGGVHPELILAAADSAETADA 356
>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor| Length = 354 Score = 257 bits (657), Expect = 2e-68 Identities = 130/152 (85%), Positives = 140/152 (92%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKAL Sbjct: 207 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKAL 266 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DMNTAED IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR Sbjct: 267 DMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 Query: 325 PNGIDGTLKNVTPALHPEMILAATNNADIVDA 230 PN +DGT+ +P L E+++A ++ ++VDA Sbjct: 327 PNAVDGTM---SPPLREELMIAYKDD-EVVDA 354
>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)| Length = 352 Score = 255 bits (651), Expect = 1e-67 Identities = 127/152 (83%), Positives = 136/152 (89%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK L+ IGMI VPGMKAL Sbjct: 204 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKAL 263 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DMN AEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG Sbjct: 264 DMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGL 323 Query: 325 PNGIDGTLKNVTPALHPEMILAATNNADIVDA 230 PN +DG + +HPE+ILAA ++A+I DA Sbjct: 324 PNALDG---SYVGGIHPELILAAADSAEIADA 352
>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)| Length = 349 Score = 248 bits (633), Expect = 1e-65 Identities = 126/152 (82%), Positives = 134/152 (88%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNWALV+ NH TQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI VPGMKAL Sbjct: 201 VTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKAL 260 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALKALG Sbjct: 261 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 320 Query: 325 PNGIDGTLKNVTPALHPEMILAATNNADIVDA 230 PN IDGTL L PE++LAA ++A+ VDA Sbjct: 321 PNAIDGTL---VGNLSPELVLAAADSAETVDA 349
>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 324 Score = 158 bits (400), Expect = 1e-38 Identities = 76/118 (64%), Positives = 94/118 (79%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNW LVSM+HD QSCMDPN + A +V+S+ GHD P GA VKRL +G I+ + GM+ L Sbjct: 198 VTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGL 257 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 DMN AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK + Sbjct: 258 DMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315
>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 320 Score = 155 bits (392), Expect = 1e-37 Identities = 75/116 (64%), Positives = 92/116 (79%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNW LVSM+HD QSCMDPN + A +++S+ GHDGP GA VKRL + I+ + GM+ L Sbjct: 194 VTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGL 253 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 338 DMN AEDAIV+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA ALK Sbjct: 254 DMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309
>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 327 Score = 148 bits (374), Expect = 1e-35 Identities = 70/116 (60%), Positives = 89/116 (76%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW LV+++HD SCMDPN + A V++S+ GHDGPFGA KRL +G + + GM+ L Sbjct: 201 VVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGL 260 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 338 DMN+AEDAIV+ TREV G+I+ GME++EIDG RMGPTFGAM++SG KAA ALK Sbjct: 261 DMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316
>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 338 Score = 147 bits (370), Expect = 4e-35 Identities = 69/120 (57%), Positives = 91/120 (75%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNW LVS+NHD QSCMDP+ + A +V S GHDGPFGA VKR+ G+ + + M+ L Sbjct: 206 VTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPL 265 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 DM AED I TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L R Sbjct: 266 DMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDR 325
>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 328 Score = 147 bits (370), Expect = 4e-35 Identities = 74/115 (64%), Positives = 85/115 (73%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 VTNW LVS+NH QSCMDPN + A +VVS+ GHDGPFGA VKRL ++ + M+ L Sbjct: 200 VTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPL 259 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 341 DMN AED IV+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA AL Sbjct: 260 DMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314
>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 326 Score = 113 bits (282), Expect = 6e-25 Identities = 66/133 (49%), Positives = 77/133 (57%), Gaps = 17/133 (12%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAK---------------VVVSSCGHDGPFGATGVKRL 551 VTNW LV+ H TQ CMDPNV+E V++S+ GHDGPFGA KR+ Sbjct: 190 VTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRI 249 Query: 550 QDIGMIQAVPGMKALDMNTAEDAIVRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAM 377 DI Q + GMK LDMN AE +V + V M GMEVAE+DG RMGPTFGAM Sbjct: 250 VDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAM 309 Query: 376 MISGQKAAHLALK 338 +SG AA LK Sbjct: 310 ALSGVHAAEQILK 322
>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme| Length = 274 Score = 89.4 bits (220), Expect = 1e-17 Identities = 50/119 (42%), Positives = 74/119 (62%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW+ V +C+DP + A+ VV + GHD A ++L + GM++A + + Sbjct: 148 VVNWSPVQGLPRQITCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVEASK-LGPM 202 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 329 + +ED +V T EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L + LG Sbjct: 203 WVERSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261
>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme| Length = 251 Score = 86.7 bits (213), Expect = 6e-17 Identities = 52/120 (43%), Positives = 67/120 (55%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW V M T +DP +EAK VV S GH +KR G+I+A+PG + Sbjct: 139 VINWTPVMM---TGLHVDPLTVEAKFVVDSTGHGAQISQHLLKR----GLIKAIPGEGPM 191 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 326 E+ V TREV PG+ TGM + GAPRMGP FG M++SG+KAA L+ LG+ Sbjct: 192 WAEKGEELTVEHTREVFPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251
>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme| Length = 252 Score = 86.3 bits (212), Expect = 8e-17 Identities = 52/119 (43%), Positives = 66/119 (55%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG A+ Sbjct: 140 VINWTPVKM---TGLHVDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAM 192 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 329 E V T+EV PG+ VTGM + GAPRMGP FG M +SG+KAA L+ LG Sbjct: 193 WAEMGEKLTVENTKEVFPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251
>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme| Length = 255 Score = 84.7 bits (208), Expect = 2e-16 Identities = 52/118 (44%), Positives = 64/118 (54%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW V M +DP +EAK V+ S GH VKR G+++ +PG A+ Sbjct: 143 VINWTPVLM---AGLHVDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAM 195 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 E V+ TREV PG+ VTGM I GAPRMGP FG M +SG+KAA LK L Sbjct: 196 WAEQGEKLTVKNTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 253
>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme| Length = 252 Score = 84.3 bits (207), Expect = 3e-16 Identities = 53/118 (44%), Positives = 65/118 (55%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKAL 506 V NW V M T +DP +EAK V+ S GH GA + L G+I+ +PG A+ Sbjct: 140 VINWTPVLM---TGLHVDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAM 192 Query: 505 DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 E V TREV PG+ VTGM I GAPRMGP FG M +SG+KAA L+ L Sbjct: 193 WAEQGERLTVENTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250
>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme| Length = 310 Score = 72.8 bits (177), Expect = 9e-13 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 23/141 (16%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLQD--I 542 V NW V +C+DP +EA VVV + GHD G A G++ +++ Sbjct: 150 VVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHAT 209 Query: 541 GMIQA-----------VPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMG 395 GM Q+ PG ++ + +ED +V T +V G++ G+ A + G RMG Sbjct: 210 GMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMG 269 Query: 394 PTFGAMMISGQKAAHLALKAL 332 PTFGAM++SG+ AA+ + L Sbjct: 270 PTFGAMLLSGKVAANAVMDEL 290
>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme| Length = 262 Score = 72.0 bits (175), Expect = 2e-12 Identities = 40/102 (39%), Positives = 58/102 (56%) Frame = -2 Query: 637 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 458 +DP + AK V+ S GHD T ++ +D+G+ VPG K++ + E+++ R TREV Sbjct: 160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREV 217 Query: 457 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 PG+ V GM RMG FG M +SG+K A L L+ L Sbjct: 218 FPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259
>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme| Length = 260 Score = 70.5 bits (171), Expect = 5e-12 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 1/119 (0%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQ-AVPGMKA 509 V NW V+ + +DP ++ K+V+ GHD T ++++ + + + + G K Sbjct: 142 VINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKP 198 Query: 508 LDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 + E V T+E+ PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 199 MWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme| Length = 260 Score = 69.3 bits (168), Expect = 1e-11 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQD--IGMIQAVPGMK 512 V NW V+ + +DP ++ K+V+ GH+ T ++++ + IG + + G K Sbjct: 142 VINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEK 197 Query: 511 ALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 + E V T+E+ PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 198 PMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme| Length = 250 Score = 67.0 bits (162), Expect = 5e-11 Identities = 38/102 (37%), Positives = 56/102 (54%) Frame = -2 Query: 637 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 458 +DP ++A VV GH A V L G+++ +D + AE +V T E+ Sbjct: 153 VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEI 207 Query: 457 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 PG++V+GM V + G PRMGP FG M++SGQK A + + L Sbjct: 208 FPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249
>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme| Length = 266 Score = 65.5 bits (158), Expect = 1e-10 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 5/123 (4%) Frame = -2 Query: 685 VTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL-----QDIGMIQAVP 521 V NW+ V M +DP + A+ V+ + GHD +++ G IQ Sbjct: 149 VLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEIVKVVERKIGPELNTPDGRIQ--- 202 Query: 520 GMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 341 G +++ + E A++ TREV P + V GM + GAPRMGP FG M++SG++ A + + Sbjct: 203 GERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMII 262 Query: 340 KAL 332 + L Sbjct: 263 EKL 265
>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme| Length = 260 Score = 63.5 bits (153), Expect = 6e-10 Identities = 34/102 (33%), Positives = 55/102 (53%) Frame = -2 Query: 637 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 458 +DP + ++ VV + GHD + ++ I + +V G ++ AE IV T ++ Sbjct: 160 VDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKI 216 Query: 457 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 V G+ GM VA + PRMGP FG M++SG+K A + + L Sbjct: 217 VKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258
>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme| Length = 263 Score = 60.8 bits (146), Expect = 4e-09 Identities = 37/102 (36%), Positives = 54/102 (52%) Frame = -2 Query: 637 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 458 +DP + +KVVV + GH+ VK+ + + VPG K++ E+A++R TREV Sbjct: 161 IDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREV 217 Query: 457 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 332 P + V GM G RMG FG M +SG+ A L + L Sbjct: 218 YPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259
>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)| Length = 48 Score = 53.5 bits (127), Expect = 6e-07 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = -2 Query: 493 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPR 401 AED IV+ RE+VPGMIVTGMEVAEIDGAPR Sbjct: 18 AEDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48
>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1228 Score = 35.0 bits (79), Expect = 0.21 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 314 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 878 ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935 Query: 313 DGTLKNV 293 +GT+ ++ Sbjct: 936 EGTVIDI 942
>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.28 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 314 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 313 DGTLKNV 293 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.28 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 314 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 313 DGTLKNV 293 +GT+ ++ Sbjct: 934 EGTVIDI 940
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 32.3 bits (72), Expect = 1.4 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Frame = +2 Query: 383 AEGRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVLGRVHVKRLHPGHRLDHADVLEPLD 562 ++G A GT++ GD N A LAG AH VL +H +LH + ++ Sbjct: 2655 SQGAASQEGTMNRGDFLLSVNGA--SLAGLAHGNVLKVLHQAQLHKDALVVIKKGMDQPR 2712 Query: 563 PGGTEGPVVAAG----AHHDLGL-----HDVGVHAGLCVVV 658 P + P A G + + L V VH LCV V Sbjct: 2713 PSARQEPPTANGKGLLSRKTIPLEPGIGRSVAVHDALCVEV 2753
>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2894 Score = 32.0 bits (71), Expect = 1.8 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = -2 Query: 526 VPGMKALDM-NTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQK 359 +PG K + + E IVR+ V GMI+ G ++ + PT + I G+K Sbjct: 865 IPGTKEAETAHLDESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEK 920 Query: 358 AAHLALKALGRPNGIDGTLKNV 293 A H+ K+L P ++GT+ +V Sbjct: 921 AGHVVNKSLYCPPSLEGTVVDV 942
>SODC_BRUAB (P15453) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 173 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +2 Query: 470 EAHDGVLGRVHVKRLHPGHRLDHADVLEPLDPGGTEG---PVVAAGAHHDLG 616 EA G+ +V++++L PG+ H PG +G P +AAG H+D G Sbjct: 45 EAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPG 96
>SODC_BRUSU (P66827) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 174 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +2 Query: 470 EAHDGVLGRVHVKRLHPGHRLDHADVLEPLDPGGTEG---PVVAAGAHHDLG 616 EA G+ +V++++L PG+ H PG +G P +AAG H+D G Sbjct: 46 EAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPG 97
>SODC_BRUME (P66826) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 174 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +2 Query: 470 EAHDGVLGRVHVKRLHPGHRLDHADVLEPLDPGGTEG---PVVAAGAHHDLG 616 EA G+ +V++++L PG+ H PG +G P +AAG H+D G Sbjct: 46 EAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPG 97
>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)| Length = 205 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +3 Query: 318 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTSRVRR 476 P G P A L AR A WP + + P V LGAP+ + ++P + PG+ R RR Sbjct: 76 PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRR 128
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 28.1 bits (61), Expect(2) = 2.7 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = -2 Query: 523 PGMKALDMNTAE-------DAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMIS 368 PG KA+DM E A+V+ +E +P + GME+A P M P G +++ Sbjct: 5338 PG-KAMDMQLDEMDRMSMIAAVVQQQQEHLPPALPAGMELASQQAPPAMAPPPGDSLVT 5395 Score = 21.6 bits (44), Expect(2) = 2.7 Identities = 8/16 (50%), Positives = 8/16 (50%) Frame = -1 Query: 563 GQAAPGHRHDPGGARD 516 G PG H PG A D Sbjct: 5328 GSVQPGSHHHPGKAMD 5343
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/64 (25%), Positives = 23/64 (35%) Frame = +3 Query: 396 PILGAPSISATSMPVTIMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAP 575 P+ +I +S P T T + T PGT WI+ + T A Sbjct: 4286 PVATMSTIHPSSTPETTHTSTVLTTKATTRATSSTSTPSSTPGTTWILTELTTAATTTAG 4345 Query: 576 KGPS 587 GP+ Sbjct: 4346 TGPT 4349
>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) (Polymyxin resistance protein pmrH) Length = 382 Score = 30.4 bits (67), Expect = 5.3 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 329 ++ I +TR + G I TG E +++ A R+G + S A H+AL ALG Sbjct: 15 DEEIAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70
>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 314 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 313 DGTLKNV 293 +GT+ +V Sbjct: 874 EGTVIDV 880
>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -2 Query: 490 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 314 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 313 DGTLKNV 293 +GT+ +V Sbjct: 874 EGTVIDV 880
>YWS4_CAEEL (Q10940) Hypothetical protein B0310.4| Length = 112 Score = 29.6 bits (65), Expect = 9.0 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +2 Query: 368 GDHHGAE---GRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVL--GRVHVKRLHPG 523 G+ H E G H RG G+ H G+ H + GE H G G+ H H G Sbjct: 18 GETHRGETHRGETH-RGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRG 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,052,844 Number of Sequences: 219361 Number of extensions: 1663166 Number of successful extensions: 5871 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 5599 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5839 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)