ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017795.1| Zea mays clone EL01N0505B10.c mRNA sequence 178 1e-41
2gb|AY109557.1| Zea mays CL38845_1 mRNA sequence 157 5e-35
3dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 5e-32
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
5dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
6dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
7gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosom... 46 0.14
8gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete... 44 0.54
9gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell... 44 0.54
10gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14... 44 0.54
11gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, co... 44 0.54
12gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
14ref|NM_102773.2| Arabidopsis thaliana unknown protein AT1G30360 ... 40 8.5
15gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, com... 40 8.5
16gb|AY763328.1| Oreochromis niloticus clone NTSII40.5 nontranscri... 40 8.5
17emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 ... 40 8.5
18emb|Z81143.1|CEZK265 Caenorhabditis elegans Cosmid ZK265, comple... 40 8.5
19gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome... 40 8.5
20gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complet... 40 8.5
21gb|AY035092.1| Arabidopsis thaliana unknown protein (At1g30360) ... 40 8.5
22gb|AC161482.6| Mus musculus chromosome 1, clone RP23-415K20, com... 40 8.5
23emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, ... 40 8.5
24emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BA... 40 8.5
25emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in ... 40 8.5
26emb|BX682557.11| Zebrafish DNA sequence from clone DKEY-288D17 i... 40 8.5
27gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, com... 40 8.5
28gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, compl... 40 8.5
29dbj|AK221977.1| Arabidopsis thaliana mRNA for ERD4 protein, part... 40 8.5
30ref|NM_059848.3| Caenorhabditis elegans ZK265.7 (ZK265.7) mRNA, ... 40 8.5
31gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's H... 40 8.5
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
33gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K... 40 8.5
34dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
35gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4 40 8.5
36dbj|AB039928.1| Arabidopsis thaliana mRNA for ERD4 protein, part... 40 8.5
37emb|CR812923.9| Zebrafish DNA sequence from clone DKEY-13G7 in l... 40 8.5
38gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complet... 40 8.5
39gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosom... 40 8.5 
>gb|BT017795.1| Zea mays clone EL01N0505B10.c mRNA sequence
          Length = 1184

 Score =  178 bits (90), Expect = 1e-41
 Identities = 171/198 (86%)
 Strand = Plus / Minus

                                                                       
Query: 426 atcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccataccag 485
           |||||||||||||||||||||| || || ||||||||||||||||||||| |||| ||| 
Sbjct: 558 atcatgtggttggtctggtcattgttgaaagaccccggcctcccatgggagccatgccat 499

                                                                       
Query: 486 gaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagcaatcc 545
           ||||  |||  ||| |||||||||||||    |||||||||||||| ||||||||||| |
Sbjct: 498 gaagatccacatcaagctcatcatcatttgtatcttcaccagattcagcgccagcaattc 439

                                                                       
Query: 546 caatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaagatataagt 605
           ||||||| ||||| | ||| ||||||||||||||||  ||||| ||||||||||| |  |
Sbjct: 438 caatgcaagcaaacaaagaagaatcgtcaactttcagatgctcatatgcaagatacagat 379

                             
Query: 606 cctcaattgtggcacttt 623
           ||||||||||||||||||
Sbjct: 378 cctcaattgtggcacttt 361
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>gb|AY109557.1| Zea mays CL38845_1 mRNA sequence
          Length = 964

 Score =  157 bits (79), Expect = 5e-35
 Identities = 148/171 (86%)
 Strand = Plus / Plus

                                                                       
Query: 426 atcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccataccag 485
           |||||||||||||||||||||| || || ||||||||||||||||||||| |||| ||| 
Sbjct: 621 atcatgtggttggtctggtcattgttgaaagaccccggcctcccatgggacccatgccat 680

                                                                       
Query: 486 gaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagcaatcc 545
           ||||  |||  |||||||| ||||| ||    |||||||||||||| |||||||||||||
Sbjct: 681 gaagatccacatcaggctcgtcatcgtttgtatcttcaccagattcagcgccagcaatcc 740

                                                              
Query: 546 caatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaa 596
           ||||||| ||||| | ||| |||||||||||||||| |||||| |||||||
Sbjct: 741 caatgcaagcaaacaaagaagaatcgtcaactttcaggtgctcatatgcaa 791
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>dbj|AK066566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O18, full
            insert sequence
          Length = 3520

 Score =  147 bits (74), Expect = 5e-32
 Identities = 170/202 (84%)
 Strand = Plus / Minus

                                                                        
Query: 422  agaaatcatgtggttggtctggtcatagtagatagaccccggcctcccatgggaaccata 481
            |||||||||||||||||||||||||| || |||||||| |||||||| || ||| |||| 
Sbjct: 3029 agaaatcatgtggttggtctggtcattgttgatagaccacggcctccaataggacccatg 2970

                                                                        
Query: 482  ccaggaagccccagctcaggctcatcatcattcacttcttcaccagattcggcgccagca 541
            ||| | || ||||  ||  ||||||||||| ||   ||||| |||||||| || ||||||
Sbjct: 2969 ccatgcaggcccatatcgagctcatcatcagtcgtctcttcgccagattcagcaccagca 2910

                                                                        
Query: 542  atcccaatgcaggcaaatagagaggaatcgtcaactttcaagtgctcgtatgcaagatat 601
            ||||||||||| ||||| | ||| || || |||||||| | |||||| ||||||||||| 
Sbjct: 2909 atcccaatgcaagcaaacaaagaagattcatcaacttttaggtgctcatatgcaagatac 2850

                                  
Query: 602  aagtcctcaattgtggcacttt 623
            ||||||||||| ||||||||||
Sbjct: 2849 aagtcctcaatcgtggcacttt 2828
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                            
Query: 518      tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
                ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 24817555 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 24817614

                                                              
Query: 578      ttcaagtgctcgtatgcaagatataagtcctcaattgtggcacttt 623
                || | |||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 24817615 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcacttt 24817660



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 422      agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
                |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 24817263 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 24817309
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0072A21
          Length = 158287

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                         
Query: 518   tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
             ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 28638 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 28697

                                                           
Query: 578   ttcaagtgctcgtatgcaagatataagtcctcaattgtggcacttt 623
             || | |||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 28698 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcacttt 28743



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 422   agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
             |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 28346 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 28392
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>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0029G06
          Length = 169711

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                          
Query: 518    tcttcaccagattcggcgccagcaatcccaatgcaggcaaatagagaggaatcgtcaact 577
              ||||| |||||||| || ||||||||||||||||| ||||| | ||| || || ||||||
Sbjct: 151236 tcttcgccagattcagcaccagcaatcccaatgcaagcaaacaaagaagattcatcaact 151295

                                                            
Query: 578    ttcaagtgctcgtatgcaagatataagtcctcaattgtggcacttt 623
              || | |||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 151296 tttaggtgctcatatgcaagatacaagtcctcaatcgtggcacttt 151341



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 422    agaaatcatgtggttggtctggtcatagtagatagaccccggcctcc 468
              |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 150944 agaaatcatgtggttggtctggtcattgttgatagaccacggcctcc 150990
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>gb|AC125116.4| Mus musculus BAC clone RP24-261C22 from chromosome 16, complete
             sequence
          Length = 180726

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 117   ctcaaagaatccctagttacaagttacaaca 147
             |||||||| |||| |||||||||||||||||
Sbjct: 68524 ctcaaagattccccagttacaagttacaaca 68554
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>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence
          Length = 182468

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 133231 ggagctatgttgataccttgaa 133252
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>gb|AC093958.2| Drosophila melanogaster 3L BAC RP98-48M7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174373

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 140959 ggagctatgttgataccttgaa 140938
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>gb|AE003480.4| Drosophila melanogaster chromosome 3L, section 14 of 83 of the complete
              sequence
          Length = 311933

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 378    ggagctatgttgataccttgaa 399
              ||||||||||||||||||||||
Sbjct: 238757 ggagctatgttgataccttgaa 238736
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>gb|AC124225.13| Mus musculus chromosome 16, clone RP23-83P23, complete sequence
          Length = 157891

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 152    aggaacctgcaagaatcaaatc 173
              ||||||||||||||||||||||
Sbjct: 103015 aggaacctgcaagaatcaaatc 103036
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
             complete sequence
          Length = 149870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   gttacaagttacaacaaccga 152
             |||||||||||||||||||||
Sbjct: 91915 gttacaagttacaacaaccga 91935
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 132      gttacaagttacaacaaccga 152
                |||||||||||||||||||||
Sbjct: 20093590 gttacaagttacaacaaccga 20093610
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>ref|NM_102773.2| Arabidopsis thaliana unknown protein AT1G30360 mRNA, complete cds
          Length = 2600

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2542 agttacaagttacaacaacc 2523
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>gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, complete sequence
          Length = 161617

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    atagaaatcatgtggttggt 439
              ||||||||||||||||||||
Sbjct: 159036 atagaaatcatgtggttggt 159055
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>gb|AY763328.1| Oreochromis niloticus clone NTSII40.5 nontranscribed intergenic
           spacer, partial sequence
          Length = 157

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 546 caatgcaggcaaatagagaggaat 569
           ||||||||||||| ||||||||||
Sbjct: 94  caatgcaggcaaacagagaggaat 117
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>emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 in linkage group 8,
             complete sequence
          Length = 218043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   aaataaaatgcaaccaccaa 266
             ||||||||||||||||||||
Sbjct: 61750 aaataaaatgcaaccaccaa 61731
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>emb|Z81143.1|CEZK265 Caenorhabditis elegans Cosmid ZK265, complete sequence
          Length = 36069

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   ttacaacaaccgaggaacct 159
             ||||||||||||||||||||
Sbjct: 29767 ttacaacaaccgaggaacct 29786
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>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence
          Length = 159785

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    caataaagatcccctcttca 377
              ||||||||||||||||||||
Sbjct: 105253 caataaagatcccctcttca 105234
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>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence
          Length = 220167

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   atagaaatcatgtggttggt 439
             ||||||||||||||||||||
Sbjct: 88714 atagaaatcatgtggttggt 88733
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>gb|AY035092.1| Arabidopsis thaliana unknown protein (At1g30360) mRNA, complete cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2359 agttacaagttacaacaacc 2340
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>gb|AC161482.6| Mus musculus chromosome 1, clone RP23-415K20, complete sequence
          Length = 190103

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   aaaataaaatgcaaccaccaagct 269
             |||||||||||||||||| |||||
Sbjct: 46506 aaaataaaatgcaaccacaaagct 46483
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>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52
          Length = 198427

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    agttacaagttacaacaacc 150
              ||||||||||||||||||||
Sbjct: 102694 agttacaagttacaacaacc 102713
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>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project)
          Length = 111945

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agttacaagttacaacaacc 150
             ||||||||||||||||||||
Sbjct: 35271 agttacaagttacaacaacc 35290
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>emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in linkage group 9,
             complete sequence
          Length = 223099

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tgtcatcctaccttcttcaa 112
             ||||||||||||||||||||
Sbjct: 83738 tgtcatcctaccttcttcaa 83719
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>emb|BX682557.11| Zebrafish DNA sequence from clone DKEY-288D17 in linkage group 3,
             complete sequence
          Length = 103591

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   aaataaaatgcaaccaccaa 266
             ||||||||||||||||||||
Sbjct: 83948 aaataaaatgcaaccaccaa 83929
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>gb|AC012215.11| Homo sapiens chromosome , clone RP11-345N15, complete sequence
          Length = 210723

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    acaatgacctgtgctactta 54
             ||||||||||||||||||||
Sbjct: 96067 acaatgacctgtgctactta 96048
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>gb|AC083838.6| Homo sapiens chromosome 8, clone RP11-42L4, complete sequence
          Length = 156623

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    acaatgacctgtgctactta 54
             ||||||||||||||||||||
Sbjct: 25421 acaatgacctgtgctactta 25402
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>dbj|AK221977.1| Arabidopsis thaliana mRNA for ERD4 protein, partial cds, clone:
           RAFL22-58-C09
          Length = 801

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 agttacaagttacaacaacc 150
           ||||||||||||||||||||
Sbjct: 752 agttacaagttacaacaacc 733
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>ref|NM_059848.3| Caenorhabditis elegans ZK265.7 (ZK265.7) mRNA, complete cds
          Length = 1386

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 ttacaacaaccgaggaacct 159
           ||||||||||||||||||||
Sbjct: 416 ttacaacaaccgaggaacct 435
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>gb|AC129342.5| Rattus norvegicus  BAC CH230-229B21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 224257

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 503    tcatcatcattcacttcttc 522
              ||||||||||||||||||||
Sbjct: 173145 tcatcatcattcacttcttc 173164
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       agtgattgattctctactgt 95
                ||||||||||||||||||||
Sbjct: 35173952 agtgattgattctctactgt 35173933
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>gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K22 genomic sequence, complete
             sequence
          Length = 82281

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   agttacaagttacaacaacc 150
             ||||||||||||||||||||
Sbjct: 37948 agttacaagttacaacaacc 37967
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>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    agtgattgattctctactgt 95
             ||||||||||||||||||||
Sbjct: 53036 agtgattgattctctactgt 53017
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>gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4
          Length = 145744

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ttctccaagaaaataaaatg 256
             ||||||||||||||||||||
Sbjct: 50282 ttctccaagaaaataaaatg 50263
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>dbj|AB039928.1| Arabidopsis thaliana mRNA for ERD4 protein, partial cds
          Length = 2099

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  agttacaagttacaacaacc 150
            ||||||||||||||||||||
Sbjct: 2062 agttacaagttacaacaacc 2043
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>emb|CR812923.9| Zebrafish DNA sequence from clone DKEY-13G7 in linkage group 11, complete
              sequence
          Length = 146997

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    aaataaaatgcaaccaccaa 266
              ||||||||||||||||||||
Sbjct: 101485 aaataaaatgcaaccaccaa 101466
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>gb|AC146299.5| Mus musculus BAC clone RP23-72A20 from 9, complete sequence
          Length = 166132

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   caataaagatcccctcttca 377
             ||||||||||||||||||||
Sbjct: 38302 caataaagatcccctcttca 38283
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>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 439    tctggtcatagtagatagac 458
              ||||||||||||||||||||
Sbjct: 110122 tctggtcatagtagatagac 110103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,714,192
Number of Sequences: 3902068
Number of extensions: 5714192
Number of successful extensions: 103067
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102890
Number of HSP's gapped (non-prelim): 174
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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