ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor 111 9e-25
2ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur... 110 2e-24
3ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP) 109 4e-24
4ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur... 102 3e-22
5ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec... 93 3e-19
6ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur... 92 6e-19
7ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec... 90 2e-18
8ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur... 90 2e-18
9ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro... 87 1e-17
10ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur... 86 5e-17
11GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 75 7e-14
12GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7 74 2e-13
13GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A 72 5e-13
14GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 71 1e-12
15GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein 70 2e-12
16GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon... 69 5e-12
17GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2 69 5e-12
18GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 68 1e-11
19ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 67 2e-11
20GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 67 2e-11
21RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ... 63 3e-10
22GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment) 63 4e-10
23CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r... 62 5e-10
24CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
25CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
26CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
27CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
28RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre... 60 2e-09
29CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine... 60 2e-09
30EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb... 60 2e-09
31RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch... 60 3e-09
32CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 60 3e-09
33CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit... 60 3e-09
34RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ... 60 3e-09
35CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit... 59 4e-09
36CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit... 59 4e-09
37CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit... 59 4e-09
38CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit... 59 4e-09
39EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (... 59 7e-09
40PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b... 59 7e-09
41RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA 57 2e-08
42EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (... 56 4e-08
43HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (... 56 5e-08
44HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (... 56 5e-08
45TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein) 54 2e-07
46TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein) 54 2e-07
47HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn... 54 2e-07
48PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-... 54 2e-07
49PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
50PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
51PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
52PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
53PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
54PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi... 53 3e-07
55TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1) 53 4e-07
56TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p... 53 4e-07
57NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 53 4e-07
58PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi... 53 4e-07
59ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB) 52 5e-07
60ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2 52 5e-07
61ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 52 5e-07
62SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli... 52 5e-07
63SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp... 52 5e-07
64SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp... 52 5e-07
65SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp... 52 5e-07
66SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp... 52 5e-07
67ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 52 5e-07
68ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha... 52 7e-07
69ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC) 52 7e-07
70ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P... 52 7e-07
71ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo... 52 7e-07
72ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha... 52 7e-07
73GAR2_SCHPO (P41891) Protein gar2 52 7e-07
74TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha) 52 9e-07
75PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 52 9e-07
76PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 52 9e-07
77TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha) 52 9e-07
78TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran... 52 9e-07
79TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr... 52 9e-07
80TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr... 52 9e-07
81PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 51 1e-06
82PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi... 50 2e-06
83PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 50 2e-06
84PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 50 2e-06
85ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR) 50 2e-06
86ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E... 50 3e-06
87SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a... 50 3e-06
88PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi... 50 3e-06
89PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi... 50 3e-06
90PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi... 49 4e-06
91RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss... 49 4e-06
92YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5 49 6e-06
93PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi... 49 6e-06
94HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4... 49 7e-06
95NAM8_YEAST (Q00539) Protein NAM8 49 7e-06
96MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote... 48 1e-05
97SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2 48 1e-05
98RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 48 1e-05
99RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 48 1e-05
100RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS... 48 1e-05
101RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 48 1e-05
102PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 48 1e-05
103YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i... 47 2e-05
104RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa... 47 3e-05
105ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu... 46 4e-05
106ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu... 46 4e-05
107PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 46 4e-05
108RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h... 46 4e-05
109RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h... 46 4e-05
110SAFB2_HUMAN (Q14151) Scaffold attachment factor B2 46 5e-05
111PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 46 5e-05
112A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1 45 6e-05
113RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif pro... 45 6e-05
114A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1 45 6e-05
115SAP49_SCHPO (O14102) Spliceosome-associated protein 49 45 6e-05
116NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 45 8e-05
117PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 45 8e-05
118PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 45 8e-05
119NUCL_CHICK (P15771) Nucleolin (Protein C23) 45 1e-04
120ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn... 44 1e-04
121ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (... 44 1e-04
122ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He... 44 1e-04
123ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (... 44 1e-04
124ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (... 44 1e-04
125ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (... 44 1e-04
126SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold atta... 44 1e-04
127NUCL_XENLA (P20397) Nucleolin (Protein C23) 44 1e-04
128ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (... 44 1e-04
129RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 44 2e-04
130SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach... 44 2e-04
131ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ... 44 2e-04
132ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1 44 2e-04
133ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/... 44 2e-04
134RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2 44 2e-04
135ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/... 44 2e-04
136RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2 44 2e-04
137CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1 43 3e-04
138MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote... 43 3e-04
139MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 43 3e-04
140FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing ... 43 3e-04
141RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h... 43 4e-04
142ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ... 43 4e-04
143ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (... 43 4e-04
144HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (... 43 4e-04
145SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 43 4e-04
146MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote... 42 5e-04
147NUCL_RAT (P13383) Nucleolin (Protein C23) 42 7e-04
148NUCL_PONPY (Q5RF26) Nucleolin 42 7e-04
149NUCL_MOUSE (P09405) Nucleolin (Protein C23) 42 7e-04
150NUCL_HUMAN (P19338) Nucleolin (Protein C23) 42 7e-04
151HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (... 42 7e-04
152HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hn... 42 7e-04
153ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (... 42 7e-04
154MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 42 7e-04
155DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp... 42 7e-04
156NUCL_MACFA (Q4R4J7) Nucleolin 42 7e-04
157NUCL_MESAU (P08199) Nucleolin (Protein C23) 42 7e-04
158YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i... 42 0.001
159RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15 42 0.001
160YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 i... 42 0.001
161DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp... 42 0.001
162DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp... 42 0.001
163ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (... 41 0.001
164RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F... 41 0.001
165HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ... 41 0.001
166HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ... 41 0.001
167IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN... 41 0.001
168MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa... 41 0.001
169IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 R... 41 0.001
170NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA... 41 0.001
171CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip... 41 0.002
172RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U... 41 0.002
173MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing prote... 41 0.002
174ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ... 41 0.002
175RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interact... 41 0.002
176MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa... 41 0.002
177MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash... 41 0.002
178MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa... 41 0.002
179RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 41 0.002
180MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa... 41 0.002
181TRA2_DROME (P19018) Transformer-2 sex-determining protein 41 0.002
182ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ... 41 0.002
183RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 40 0.002
184HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h... 40 0.002
185FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei... 40 0.002
186FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei... 40 0.002
187RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U... 40 0.002
188RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact... 40 0.002
189RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interact... 40 0.002
190RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U... 40 0.002
191PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 40 0.003
192BOLL_MACFA (Q8WP23) Protein boule-like 40 0.003
193BOLL_HUMAN (Q8N9W6) Protein boule-like 40 0.003
194RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interact... 40 0.003
195RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin... 40 0.003
196GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 40 0.003
197RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h... 40 0.003
198RSD1_SCHPO (O13845) RNA-binding protein rsd1 40 0.003
199RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C... 39 0.004
200PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ... 39 0.004
201RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 39 0.006
202HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (... 39 0.006
203MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 39 0.006
204RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p... 39 0.006
205RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-bindin... 39 0.008
206BOLL_MOUSE (Q924M5) Protein boule-like 39 0.008
207FCA_ARATH (O04425) Flowering time control protein FCA 39 0.008
208TRA2_DROVI (O02008) Transformer-2 sex-determining protein 39 0.008
209IF34_CAEEL (Q19706) Probable eukaryotic translation initiation f... 39 0.008
210PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 ... 39 0.008
211RB97D_DROME (Q02926) Ribonucleoprotein RB97D 39 0.008
212YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i... 39 0.008
213HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn... 38 0.010
214HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (... 38 0.010
215HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (... 38 0.010
216BOULE_DROME (Q24207) Protein boule 38 0.010
217RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif pro... 38 0.013
218RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p... 38 0.013
219HNRPC_MOUSE (Q9Z204) Heterogeneous nuclear ribonucleoproteins C1... 37 0.017
220MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156) 37 0.017
221MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2) 37 0.017
222HNRPC_XENLA (P19600) Heterogeneous nuclear ribonucleoprotein C (... 37 0.017
223SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl... 37 0.017
224MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 37 0.017
225IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9... 37 0.017
226LARK_DROME (Q94901) RNA-binding protein lark 37 0.017
227IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s... 37 0.017
228IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s... 37 0.017
229HNRPC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1... 37 0.017
230PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 37 0.022
231RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri... 37 0.022
232RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p... 37 0.022
233RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U... 37 0.022
234HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34) 37 0.022
235RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U... 37 0.029
236MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote... 37 0.029
237U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux... 36 0.038
238U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux... 36 0.038
239PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (E... 36 0.038
240RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif pro... 36 0.049
241SGN1_YEAST (P40561) RNA-binding protein SGN1 36 0.049
242ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimu... 36 0.049
243THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and expor... 36 0.049
244THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1... 36 0.049
245ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimula... 36 0.049
246IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H ... 36 0.049
247IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H ... 36 0.049
248U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux... 35 0.065
249RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro... 35 0.065
250YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i... 35 0.065
251SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35) 35 0.065
252RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif pro... 35 0.084
253SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein) 35 0.084
254NELFE_DROVI (Q95ZE9) Negative elongation factor E 35 0.084
255PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6... 35 0.11
256RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1 34 0.14
257ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimu... 34 0.14
258REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2 34 0.14
259NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD p... 34 0.19
260ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimu... 34 0.19
261PRT1_PICAN (P12806) Putative PRT1 protein 34 0.19
262U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 aux... 34 0.19
263NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD p... 34 0.19
264DAZ1_CAEEL (Q20870) DAZ protein 1 34 0.19
265TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43) 33 0.25
266SFRS5_RAT (Q09167) Splicing factor, arginine/serine-rich 5 (Pre-... 33 0.25
267NELFE_DROME (P92204) Negative elongation factor E 33 0.25
268SFRS5_MOUSE (O35326) Splicing factor, arginine/serine-rich 5 (Pr... 33 0.25
269IF34_SCHPO (P78795) Probable eukaryotic translation initiation f... 33 0.25
270SFRS5_HUMAN (Q13243) Splicing factor, arginine/serine-rich 5 (Pr... 33 0.25
271TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein 33 0.25
272DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso... 33 0.32
273DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso... 33 0.32
274DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso... 33 0.32
275MSA1_SCHPO (Q10277) Multicopy suppressor of sporulation protein ... 33 0.42
276TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43) 32 0.55
277PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 0.55
278SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich... 32 0.55
279SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich... 32 0.55
280NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding prot... 32 0.55
281MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos... 32 0.55
282NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding pr... 32 0.55
283NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding pr... 32 0.55
284PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 0.55
285DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso... 32 0.55
286MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing prote... 32 0.55
287NOP12_GIBZE (Q4IQW0) Nucleolar protein 12 32 0.55
288NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding pr... 32 0.55
289DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein) 32 0.71
290NOP12_SCHPO (O13741) Nucleolar protein 12 32 0.71
291MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos... 32 0.71
292YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 i... 32 0.71
293CN044_HUMAN (Q96MY7) Protein C14orf44 32 0.71
294RNP24_SCHPO (Q09100) RNA-binding protein rnp24 32 0.93
295DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4 32 0.93
296DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2 32 0.93
297DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1 32 0.93
298RSP41_ARATH (P92966) Arginine/serine-rich splicing factor RSP41 32 0.93
299HNRCL_HUMAN (O60812) Heterogeneous nuclear ribonucleoprotein C-l... 32 0.93
300DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3 32 0.93
301PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin... 32 0.93
302MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 32 0.93
303RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1 32 0.93
304RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1 32 0.93
305RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1 32 0.93
306RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1 32 0.93
307RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain... 32 0.93
308YAC4_SCHPO (Q09818) Putative general negative regulator of trans... 31 1.2
309RAVR2_HUMAN (Q9HCJ3) Protein raver-2 31 1.2
310MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing prote... 31 1.6
311RSP40_ARATH (P92965) Arginine/serine-rich splicing factor RSP40 31 1.6
312NOP12_ASPFU (Q4WCH5) Nucleolar protein 12 31 1.6
313CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C... 31 1.6
314CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C... 31 1.6
315CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate... 31 1.6
316RSP5_CAEEL (Q10021) Probable splicing factor, arginine/serine-ri... 31 1.6
317RAVR1_HUMAN (Q8IY67) Protein raver-1 30 2.1
318RAVR2_MOUSE (Q7TPD6) Protein raver-2 30 2.1
319RSP2_CAEEL (Q23120) Probable splicing factor, arginine/serine-ri... 30 2.1
320RAVR1_RAT (Q5XI28) Protein raver-1 30 2.7
321RAVR1_MOUSE (Q9CW46) Protein raver-1 30 2.7
322RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-ri... 30 2.7
323WDR53_MOUSE (Q9DB94) WD-repeat protein 53 30 2.7
324DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1 30 3.5
325NONA_DROME (Q04047) Protein no-on-transient A (Puff-specific pro... 30 3.5
326ECR_BOMMO (P49881) Ecdysone receptor (Ecdysteroid receptor) (20-... 24 4.6
327SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein... 29 4.6
328SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pr... 29 4.6
329RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho... 29 6.0
330THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-... 29 6.0
331SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp... 29 6.0
332T22D4_MOUSE (Q9EQN3) TSC22 domain family protein 4 (TSC22-relate... 29 6.0
333CWC2_DEBHA (Q6BLU8) Pre-mRNA-splicing factor CWC2 29 6.0
334SFRS7_MOUSE (Q8BL97) Splicing factor, arginine/serine-rich 7 29 6.0
335RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri... 29 6.0
336RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protei... 28 7.9
337RBP1_DROME (Q02427) RNA-binding protein 1 28 7.9
338NOP12_EMENI (Q5BDC8) Nucleolar protein 12 28 7.9
339MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos... 28 7.9
340GATB_GEOSL (P61343) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe... 28 7.9

>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score =  111 bits (277), Expect = 9e-25
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD+RL +LFSEHGKVV ARVVYDR+TGRSRGFGFVTMAS+ E+ DAIA LDGQSL+GR 
Sbjct: 241 IDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRT 300

Query: 265 LRVNVAEE 242
           +RVNVAE+
Sbjct: 301 IRVNVAED 308



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD   L  LF + G V  A V+Y+RDT +SRGFGFVTM++ EE + A+   +   + GR 
Sbjct: 147 VDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRL 206

Query: 265 LRVNVA 248
           L VN A
Sbjct: 207 LTVNKA 212



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>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score =  110 bits (275), Expect = 2e-24
 Identities = 53/68 (77%), Positives = 64/68 (94%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD+ RL +LFSEHGKVV+ARVVYDR+TGRSRGFGFVTM+  +EL++AI+ALDGQ+LEGRA
Sbjct: 255 VDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRA 314

Query: 265 LRVNVAEE 242
           +RVNVAEE
Sbjct: 315 IRVNVAEE 322



 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V+   L  LF + G V  A V+Y+R+T +SRGFGFVTM+S +E + A+   +   L GR 
Sbjct: 161 VNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRL 220

Query: 265 LRVNVA 248
           L VN A
Sbjct: 221 LTVNKA 226



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>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score =  109 bits (272), Expect = 4e-24
 Identities = 54/68 (79%), Positives = 63/68 (92%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD SRL +LFSEHGKVV ARVV DR+TGRSRGFGFVTM+S+ E++DAIAALDGQ+L+GRA
Sbjct: 160 VDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRA 219

Query: 265 LRVNVAEE 242
           +RVNVAEE
Sbjct: 220 VRVNVAEE 227



 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 32/66 (48%), Positives = 44/66 (66%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD  +L  +F   G V  A V+Y+R+T RSRGFGFVTM++ EE + A+  L+G  ++GR 
Sbjct: 66  VDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQ 125

Query: 265 LRVNVA 248
           L VN A
Sbjct: 126 LTVNKA 131



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>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score =  102 bits (255), Expect = 3e-22
 Identities = 47/68 (69%), Positives = 61/68 (89%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD+RL ++FSEHGKVV ARVV+DR++GRSRGFGFVTM+S+ E+ +AIA LDGQ+L+GR 
Sbjct: 202 IDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRT 261

Query: 265 LRVNVAEE 242
           +RVN AEE
Sbjct: 262 IRVNAAEE 269



 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D   L +LF + G V  A V+Y+R+T RSRGFGFVTM++ EE D A+       L GR 
Sbjct: 108 IDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRL 167

Query: 265 LRVNVA 248
           L VN A
Sbjct: 168 LTVNKA 173



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>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 92.8 bits (229), Expect = 3e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L ELFSE G VVDA+VVYDRD+GRSRGFGFVT +S +E++DAI +L+G  L+GR+
Sbjct: 218 VDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRS 277

Query: 265 LRVNVAEE 242
           +RV+ AEE
Sbjct: 278 IRVSAAEE 285



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD + L  LF   G V    V+YD+ TGRSRGFGFVTM+++EE++ A    +G  ++GRA
Sbjct: 98  VDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRA 157

Query: 265 LRVN 254
           +RVN
Sbjct: 158 IRVN 161



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>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L ELFSE G VVDA+VVYDRD+GRSRGFGFVT +S +E++DAI +L+G  L+GR+
Sbjct: 219 VDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRS 278

Query: 265 LRVNVAEE 242
           +RV+ AEE
Sbjct: 279 IRVSAAEE 286



 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD + L  LF   G V    V+YD+ +GRSRGFGFVTM+++EE++ A    +G  ++GRA
Sbjct: 99  VDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRA 158

Query: 265 LRVN 254
           +RVN
Sbjct: 159 IRVN 162



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>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD   L  LFSE GKVVDA+VVYDRD+GRSRGFGFVT +S EE+++AI +LDG  L GRA
Sbjct: 199 VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRA 258

Query: 265 LRVNVAE 245
           +RV+ AE
Sbjct: 259 IRVSPAE 265



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/63 (55%), Positives = 44/63 (69%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D + L ELF   G V    V+YD+ TGRSRGFGFVTM+S+EE++ A    +G  L+GRAL
Sbjct: 99  DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158

Query: 262 RVN 254
           RVN
Sbjct: 159 RVN 161



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>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD   L  LFSE GKVVDA+VVYDRD+GRSRGFGFVT +S EE+++AI +LDG  L GRA
Sbjct: 205 VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRA 264

Query: 265 LRVNVAE 245
           +RV+ AE
Sbjct: 265 IRVSPAE 271



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/63 (55%), Positives = 44/63 (69%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D + L ELF   G V    V+YD+ TGRSRGFGFVTM+S+EE++ A    +G  L+GRAL
Sbjct: 99  DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158

Query: 262 RVN 254
           RVN
Sbjct: 159 RVN 161



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>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L  LFSE GKVV+ARV+YDRD+GRS+GFGFVT  S +E+ +AI +LDG  L+GR 
Sbjct: 215 VDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQ 274

Query: 265 LRVNVAE 245
           +RV+ AE
Sbjct: 275 IRVSEAE 281



 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 33/64 (51%), Positives = 43/64 (67%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD ++L +LF   G V    V+YD+ TGRSRGFGFVTM+S  E++ A    +G  L+GR 
Sbjct: 102 VDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRP 161

Query: 265 LRVN 254
           LRVN
Sbjct: 162 LRVN 165



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>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L  LF+E GKVV+ARV+YDRD+GRS+GFGFVT++S +E+  AI +L+G  L+GR 
Sbjct: 268 VDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQ 327

Query: 265 LRVNVAE 245
           +RV+ AE
Sbjct: 328 IRVSEAE 334



 Score = 66.2 bits (160), Expect = 3e-11
 Identities = 32/64 (50%), Positives = 42/64 (65%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD ++L +LF   G V    V+YD+ TGRSRGFGFVTM++  E++ A    +G   EGR 
Sbjct: 110 VDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRP 169

Query: 265 LRVN 254
           LRVN
Sbjct: 170 LRVN 173



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>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 32/66 (48%), Positives = 50/66 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           DD  L   FS++G+V+D++++ DR+TGRSRGFGFVT   ++ + DAI  ++GQ L+GR++
Sbjct: 20  DDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79

Query: 262 RVNVAE 245
            VN A+
Sbjct: 80  TVNEAQ 85



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>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 31/66 (46%), Positives = 49/66 (74%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           DD  L   F+++G V+D++++ DR+TGRSRGFGFVT   ++ + DAI  ++GQ L+GR++
Sbjct: 20  DDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSI 79

Query: 262 RVNVAE 245
            VN A+
Sbjct: 80  TVNEAQ 85



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>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 31/66 (46%), Positives = 49/66 (74%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L   FS+ G++VD++++ DR+TGRSRGFGFVT   ++ + DAI  ++GQ L+GR++
Sbjct: 20  DERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSI 79

Query: 262 RVNVAE 245
            VN A+
Sbjct: 80  TVNEAQ 85



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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 30/65 (46%), Positives = 48/65 (73%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D+ L   FS+ G+V+D++++ DR+TGRSRGFGFVT   ++ + DAI  ++G+ L+GR + 
Sbjct: 19  DAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTIT 78

Query: 259 VNVAE 245
           VN A+
Sbjct: 79  VNEAQ 83



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>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 30/66 (45%), Positives = 47/66 (71%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +D  L + FS+ G + D++++ DR+TGRSRGFGFVT   ++ + DAI  ++GQ L+GR +
Sbjct: 18  NDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNI 77

Query: 262 RVNVAE 245
            VN A+
Sbjct: 78  TVNEAQ 83



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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           DD+ L + F+  G VVDA+V+ DR+TGRSRGFGFV    +     AI+ +DG+ L GR +
Sbjct: 47  DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHI 106

Query: 262 RVNVAEE 242
           RVN A +
Sbjct: 107 RVNPAND 113



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>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 30/66 (45%), Positives = 50/66 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L + F+  G+V+D++V+ DR+TGRSRGFGFVT +S++ + DAI  ++G+ L+GR +
Sbjct: 20  NNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNI 79

Query: 262 RVNVAE 245
            VN A+
Sbjct: 80  TVNQAQ 85



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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 29/66 (43%), Positives = 47/66 (71%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +D  L   FS+ G V+D++++ DR++GRSRGFGFVT   ++ + DAI  ++G+ L+GR +
Sbjct: 18  NDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVI 77

Query: 262 RVNVAE 245
            VN A+
Sbjct: 78  TVNEAQ 83



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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 42/64 (65%)
 Frame = -3

Query: 436 SRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           S+L E+F+E G V +  +VYDR T RSRGF FVTM S EE  +AI   DG  + GR ++V
Sbjct: 128 SQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKV 187

Query: 256 NVAE 245
           N  E
Sbjct: 188 NFPE 191



 Score = 61.6 bits (148), Expect = 8e-10
 Identities = 28/61 (45%), Positives = 43/61 (70%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L + F++    + A+V+YDR +GRSRGFGF+T +S E ++ A+  ++   LEGR LR+NV
Sbjct: 233 LRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNV 292

Query: 250 A 248
           A
Sbjct: 293 A 293



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>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 29/62 (46%), Positives = 47/62 (75%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L   F+ +G+++D++V+ DR+TGRSRGFGFVT +S+  + DAI  ++G+ L+GR + VN 
Sbjct: 24  LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83

Query: 250 AE 245
           A+
Sbjct: 84  AQ 85



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>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L + FS  G + +  VV DR+T RSRGFGF+T  + E   DA+ A++G+SL+GR +
Sbjct: 18  DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDHA 82



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>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 26/58 (44%), Positives = 45/58 (77%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           FS +G+V++++++ DR+T RSRGFGFVT +++E +  AI  ++G+ L+GR + VN A+
Sbjct: 7   FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64



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>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 28/65 (43%), Positives = 49/65 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L ++FS++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +
Sbjct: 18  NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDQA 82



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>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 28/65 (43%), Positives = 49/65 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L ++FS++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +
Sbjct: 18  NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDQA 82



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>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 28/65 (43%), Positives = 49/65 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L ++FS++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +
Sbjct: 18  NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDQA 82



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>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 28/65 (43%), Positives = 49/65 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L ++FS++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +
Sbjct: 18  NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDQA 82



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>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 28/65 (43%), Positives = 49/65 (75%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L ++FS++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +
Sbjct: 18  NEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDQA 82



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>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L + FS    V +ARV+ ++ TGRSRG+GFV   S++  + AI+A++GQ L G  +
Sbjct: 43  DEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNI 102

Query: 262 RVNVAEE 242
            VNVA++
Sbjct: 103 SVNVAKD 109



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>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 27/61 (44%), Positives = 46/61 (75%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L + F+++G++ +  VV DR+T RSRGFGFVT  + ++  DA+ A++G+S++GR +RV+ 
Sbjct: 21  LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQ 80

Query: 250 A 248
           A
Sbjct: 81  A 81



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>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL E+FS  G  +  +V+ D DTGRSRGFGFV   + EE   A++ ++G+ + GR 
Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS +G +  A+V+   + G S+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTRLL 182
           L V +A+  E        +Y+ R  T R +
Sbjct: 363 LYVALAQRKEERKAILTNQYMQRLATMRAM 392



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D     SRG+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L + FSE GKV+ A+V     T +S GFGFV+ +S+EE++ AI AL+   LEG+ 
Sbjct: 195 VTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQK 254

Query: 265 LRVNVA 248
           +RVN A
Sbjct: 255 IRVNKA 260



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 26/68 (38%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +++  L  +  EHG +  A V+YD+ +GRSR FGFVTM + E+ +  I  L+   + GR 
Sbjct: 95  LNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRK 154

Query: 265 LRVNVAEE 242
           ++VN+ E+
Sbjct: 155 IKVNITEK 162



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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 29/65 (44%), Positives = 43/65 (66%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L + FS  G + +  VV DR+T RSRGFGF+T  + E    A+ A++G+SL+GR +
Sbjct: 18  DEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQI 77

Query: 262 RVNVA 248
           RV+ A
Sbjct: 78  RVDHA 82



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>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + +L ++FSE G VV  R+VYDR+TG+ +G+GF     QE    A+  L+G+   GRALR
Sbjct: 29  EEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALR 88

Query: 259 V-NVAEE 242
           V N A E
Sbjct: 89  VDNAASE 95



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>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 28/68 (41%), Positives = 44/68 (64%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL E+FS  G  +  +V+ D D+GRSRGFGFV   + EE   A++ ++G+ + GR 
Sbjct: 202 MDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRM 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + F  +G +  A+V+   + G S+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTRLL 182
           L V +A+  E        +Y+ R  T R +
Sbjct: 363 LYVALAQRKEERKAILTNQYMQRLATMRAM 392



 Score = 37.7 bits (86), Expect = 0.013
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D     SRG+GFV   + E  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 58.5 bits (140), Expect = 7e-09
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L   F +    +   V++D  TG SRG+GFV+  SQ++  +A+ ++ GQ L GR 
Sbjct: 172 VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRP 231

Query: 265 LRVNVA 248
           LR+N A
Sbjct: 232 LRINWA 237



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>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V ++ L  +F+E+G V   ++  DR+TGR RGFGFV + +  E   AI ALDG    GR 
Sbjct: 12  VSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMGRD 71

Query: 265 LRVNVAE 245
           L+VN A+
Sbjct: 72  LKVNKAK 78



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>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL E+FS  G  +  +V+ D ++GRSRGFGFV   + EE   A+  ++G+ + GR 
Sbjct: 202 MDDKRLKEIFSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRM 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 VYVGRAQK 268



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS +G +   +V+   + G S+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDDRLRKEFSPYGTITSTKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTRLL 182
           L V +A+  E        +Y+ R  T R +
Sbjct: 363 LYVALAQRKEERKAILTNQYMQRLATMRAM 392



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D     SRG+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 24/65 (36%), Positives = 44/65 (67%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L  +F ++G++V+  ++ DR+T +SRGF FVT  S  +  DA   ++G+SL+G+A+
Sbjct: 20  NEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAI 79

Query: 262 RVNVA 248
           +V  A
Sbjct: 80  KVEQA 84



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>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 24/65 (36%), Positives = 45/65 (69%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L  +F ++G++V+  ++ DR+T +SRGF FVT+ S  +  DA   ++G+SL+G+A+
Sbjct: 20  NEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAI 79

Query: 262 RVNVA 248
           +V  A
Sbjct: 80  KVEQA 84



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>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           F+  GK+ DARVV D  TG+S+G+GFV+  ++ + ++AI  + GQ L GR +R N A
Sbjct: 117 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173



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>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           F+  GK+ DARVV D  TG+S+G+GFV+  ++ + ++AI  + GQ L GR +R N A
Sbjct: 134 FAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190



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>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 23/65 (35%), Positives = 43/65 (66%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L  +F ++G++V+  ++ DR+T +SRGF FVT  S  +  D    ++G+SL+G+A+
Sbjct: 20  NEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAI 79

Query: 262 RVNVA 248
           +V  A
Sbjct: 80  KVEQA 84



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>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 26/68 (38%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL E F ++G  +  +V+ D D G+SRGFGFV+    E+   A+  ++G+ L G+A
Sbjct: 202 MDDERLKEWFGQYGAALSVKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKA 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IFVGRAQK 268



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + F+  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTRL 185
           L V +A+  E        +Y+ R  + R+
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVRV 391



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 42/68 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L ELF E+G     +V+ D  +G+S+GFGFV   + E    A+  L G+S++G+ 
Sbjct: 210 IDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 269 LYVGRAQK 276



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>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           F+  G++ DARVV D  TG+S+G+GFV+  ++ + ++AI  + GQ L GR +R N A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182



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>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           F+  G++ DARVV D  TG+S+G+GFV+  ++ + ++AI  + GQ L GR +R N A
Sbjct: 126 FAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWA 182



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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 23/66 (34%), Positives = 41/66 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD  L + F   G V+ ARV+Y+R T RSRG+G+V   ++   + AI  + G+ ++GR 
Sbjct: 179 IDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRP 238

Query: 265 LRVNVA 248
           +  +++
Sbjct: 239 INCDMS 244



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 21/63 (33%), Positives = 40/63 (63%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D   + ELF++HG+VV  R+    +T + +GFG+V  ++ E+   A+ AL G+ ++ R +
Sbjct: 279 DRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPV 338

Query: 262 RVN 254
           R++
Sbjct: 339 RLD 341



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>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 25/68 (36%), Positives = 44/68 (64%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L ELFS+ GK +  +V+ D + G+S+GFGFV+    E+ + A+  ++G+ + G+ 
Sbjct: 202 VDDESLKELFSQFGKTLSVKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKI 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IFVGRAQK 268



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD +L + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 362

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 363 LYVALAQ 369



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>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L ++F   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 262 RVN 254
           +V+
Sbjct: 348 QVS 350



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ 
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114

Query: 250 A 248
           A
Sbjct: 115 A 115



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>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L ++F   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 262 RVN 254
           +V+
Sbjct: 348 QVS 350



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ 
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114

Query: 250 A 248
           A
Sbjct: 115 A 115



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>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L ++F   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 288 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 347

Query: 262 RVN 254
           +V+
Sbjct: 348 QVS 350



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ 
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114

Query: 250 A 248
           A
Sbjct: 115 A 115



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>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F ++G+V D  +  DR T  SRGF FV    + + +DA+ A+DG  L+GR LRV +
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88

Query: 250 A 248
           A
Sbjct: 89  A 89



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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F ++G+V D  +  DR T  SRGF FV    + + +DA+ A+DG  L+GR LRV +
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88

Query: 250 A 248
           A
Sbjct: 89  A 89



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>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F ++G+V D  +  DR T  SRGF FV    + + +DA+ A+DG  L+GR LRV +
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88

Query: 250 A 248
           A
Sbjct: 89  A 89



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>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F ++G+V D  +  DR T  SRGF FV    + + +DA+ A+DG  L+GR LRV +
Sbjct: 29  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 88

Query: 250 A 248
           A
Sbjct: 89  A 89



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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F ++G+V D  +  DR T  SRGF FV    + + +DA+ A+DG  L+GR LRV +
Sbjct: 30  LRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQM 89

Query: 250 A 248
           A
Sbjct: 90  A 90



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>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L ++F   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 289 DESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 348

Query: 262 RVN 254
           +V+
Sbjct: 349 QVS 351



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITV 200



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/61 (32%), Positives = 36/61 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ 
Sbjct: 55  LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114

Query: 250 A 248
           A
Sbjct: 115 A 115



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>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L +LF   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 309 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 368

Query: 262 RVN 254
           +V+
Sbjct: 369 QVS 371



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 148 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 207



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/58 (32%), Positives = 35/58 (60%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ A
Sbjct: 65  LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 122



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>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 40/63 (63%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L +LF   G V + +V+ D  T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVL 355

Query: 262 RVN 254
           +V+
Sbjct: 356 QVS 358



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 22/65 (33%), Positives = 40/65 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +    + +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G A
Sbjct: 136 MSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAA 195

Query: 265 LRVNV 251
             + V
Sbjct: 196 EPITV 200



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           LF   G +   ++V D+ TG+S G+GFV  +   + D AI  L+G  L+ + ++V+ A
Sbjct: 58  LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115



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>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 40/63 (63%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L +LF   G V + +V+ D  T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 296 DESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVL 355

Query: 262 RVN 254
           +V+
Sbjct: 356 QVS 358



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/65 (33%), Positives = 40/65 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +    + +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G A
Sbjct: 136 MSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAA 195

Query: 265 LRVNV 251
             + V
Sbjct: 196 EPITV 200



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           LF   G +   ++V D+ TG+S G+GFV  +   + D AI  L+G  L+ + ++V+ A
Sbjct: 58  LFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYA 115



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>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L +LF   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 302 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 361

Query: 262 RVN 254
           +V+
Sbjct: 362 QVS 364



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 200



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/58 (32%), Positives = 35/58 (60%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ A
Sbjct: 58  LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 115



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>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+S L +LF   G V + +V+ D +T + +GFGFVTM + +E   AIA+L+G  L  R L
Sbjct: 314 DESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVL 373

Query: 262 RVN 254
           +V+
Sbjct: 374 QVS 376



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L +LFS++G+++ +R++ D+ TG SRG GF+    + E ++AI  L+GQ   G    + V
Sbjct: 153 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITV 212



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/58 (32%), Positives = 35/58 (60%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           LF   G++   ++V D+ TG+S G+GFV     ++ + AI  L+G  L+ + ++V+ A
Sbjct: 70  LFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 127



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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 24/66 (36%), Positives = 42/66 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L + F E+G +V ARV+ D  +GRS+G+G+V   + E    A+AA   + ++GR 
Sbjct: 274 VDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRM 333

Query: 265 LRVNVA 248
           + ++++
Sbjct: 334 VNLDLS 339



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           F   G +   R+  D  +GR +GFG+VT +  +     +  ++G  + GR  R++
Sbjct: 386 FGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EMNGHFIAGRPCRLD 439



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>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 25/59 (42%), Positives = 37/59 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           L E+FS +G +    VVYD+ TGRSRGF FV     ++  +A+   +G  L+GR +RV+
Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 191



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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL ELF + G  +  +V+ D ++G+S+GFGFV+    E+   A+  ++G+ L G+ 
Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTR 188
           L V +A+  E        +Y+ R  + R
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVR 390



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL ELF + G  +  +V+ D ++G+S+GFGFV+    E+   A+  ++G+ L G+ 
Sbjct: 202 MDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTR 188
           L V +A+  E        +Y+ R  + R
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVR 390



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 25/59 (42%), Positives = 37/59 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           L E+FS +G +    VVYD+ TGRSRGF FV     ++  +A+   +G  L+GR +RV+
Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 193



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>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           L E+FS++G + D  +VYD+ + RSRGF FV   + ++  +A    +G  L+GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           L E+FS++G + D  +VYD+ + RSRGF FV   + ++  +A    +G  L+GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           L E+FS++G + D  +VYD+ + RSRGF FV   + ++  +A    +G  L+GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 22/68 (32%), Positives = 44/68 (64%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           ++D RL E+F ++G  +  +V+ D D G+S+GFGFV+    E+   A+  ++G+ + G++
Sbjct: 202 MNDERLKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKS 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 MFVGRAQK 268



 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + F   G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTRL 185
           L V +A+  E        +Y+ R  + R+
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVRV 391



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/68 (33%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL +LF + G  +  +V+ D ++G+S+GFGFV+    E+   A+  ++G+ L G+ 
Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTR 188
           L V +A+  E         Y+ R  + R
Sbjct: 363 LYVALAQRKEERQAYLTNEYMQRMASVR 390



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +++  L +  S  G ++   VV D +   S+G+GFV   + E  + AI  ++G  L GR 
Sbjct: 110 INNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/68 (33%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL +LF + G  +  +V+ D ++G+S+GFGFV+    E+   A+  ++G+ L G+ 
Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTR 188
           L V +A+  E        +Y+ R  + R
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVR 390



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/68 (33%), Positives = 43/68 (63%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL +LF + G  +  +V+ D ++G+S+GFGFV+    E+   A+  ++G+ L G+ 
Sbjct: 202 MDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260

Query: 265 LRVNVAEE 242
           + V  A++
Sbjct: 261 IYVGRAQK 268



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL + FS  G +  A+V+ +   GRS+GFGFV  +S EE   A+  ++G+ +  + 
Sbjct: 305 IDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 362

Query: 265 LRVNVAE--EXXXXXXXXRYIWRCTTTR 188
           L V +A+  E        +Y+ R  + R
Sbjct: 363 LYVALAQRKEERQAHLTNQYMQRMASVR 390



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++  +VV D +   S+G+GFV   +QE  + AI  ++G  L  R 
Sbjct: 110 IDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRK 167

Query: 265 LRV 257
           + V
Sbjct: 168 VFV 170



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>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L ++F   G V + +V+ D +T + +GFGFVTM + EE   AIA+L+G  L  + L
Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKIL 315

Query: 262 RVN 254
           +V+
Sbjct: 316 QVS 318



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 18/58 (31%), Positives = 35/58 (60%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           ++FS  G+++++RV+ D+ TG SRG  F+    + E ++AI + +G    G +  + V
Sbjct: 124 DMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITV 181



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/61 (34%), Positives = 37/61 (60%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS  G+V  A+++ D+  G S G+GFV   + ++ + AI  L+G  L+ + ++V+ 
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSY 95

Query: 250 A 248
           A
Sbjct: 96  A 96



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>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  L ++F   G V + +V+ D +T + +GFGFVTM + EE   AIA+L+G  L  + L
Sbjct: 256 DEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKIL 315

Query: 262 RVN 254
           +V+
Sbjct: 316 QVS 318



 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 21/61 (34%), Positives = 38/61 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS  G+V  A+++ D+  G S G+GFV   + ++ + AI+ L+G  L+ + ++V+ 
Sbjct: 36  LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTLNGLRLQSKTIKVSY 95

Query: 250 A 248
           A
Sbjct: 96  A 96



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           ++FS  G+++++RV+ D+ TG SRG  F+    + E ++AI +  G    G +  + V
Sbjct: 124 DMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITV 181



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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L ELF + G VV+  +  DR TG+ +G+GFV   S+E+ D AI  ++   L G+ 
Sbjct: 24  VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKP 83

Query: 265 LRVNVA 248
           +RVN A
Sbjct: 84  IRVNKA 89



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDA-RVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           +D+  L + FS  G ++   +++ D DTG S+G+ F+  AS +  D AI A++GQ L  R
Sbjct: 111 IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNR 170

Query: 268 ALRVNVA 248
            + V+ A
Sbjct: 171 PITVSYA 177



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>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 25/67 (37%), Positives = 42/67 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + D +L E+FS  G V  ++V+ D + G S+G GFV  A+ EE  +A++ L G+ +E + 
Sbjct: 329 ISDEKLKEIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKP 387

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 388 LYVAIAQ 394



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 35/63 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D   L + FS  G +V  +V  D  +G+S+G+GFV  A++E    AI  L+G  L  + 
Sbjct: 135 IDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQ 193

Query: 265 LRV 257
           + V
Sbjct: 194 VYV 196



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L   F E+GK+  A V+ D + G+S+GFGFV   + ++   A+ +L+G   + +   
Sbjct: 228 DDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWY 286

Query: 259 VNVAEE 242
           V  A++
Sbjct: 287 VGRAQK 292



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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 25/67 (37%), Positives = 44/67 (65%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD +L E+FSE+G V  ++V+ +   G SRGFGFV  ++ EE   A++ ++G+ +  + 
Sbjct: 343 VDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKP 401

Query: 265 LRVNVAE 245
           L + +A+
Sbjct: 402 LYIALAQ 408



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L E FS  G ++  +V  D  TGRS+G+GFV    +E    AI  L+G  +  + 
Sbjct: 147 IDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQ 205

Query: 265 LRV 257
           + V
Sbjct: 206 VFV 208



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>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSL-EGRA 266
           DD +L E F  +GK+   +V+   D G+S+GFGFV   + E  + A+ AL+G+ + EG++
Sbjct: 195 DDEKLKEFFEPYGKITSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKS 253

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 254 LYVARAQK 261



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 25/67 (37%), Positives = 40/67 (59%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DD RL   FS +G +  A+V+ D + GRS+GFGFV   +  E   A+  L+G+ +  + 
Sbjct: 298 IDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKP 356

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 357 LYVALAQ 363



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 18/63 (28%), Positives = 36/63 (57%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  + + FS  G ++  +V  D + G S+G+GFV   ++E  + +I  ++G  L G+ 
Sbjct: 101 IDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKK 159

Query: 265 LRV 257
           + V
Sbjct: 160 VYV 162



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>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D+ L + F   G + +A V+ DR TG+SRG+GFVTMA +   D A        ++GR   
Sbjct: 45  DASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD-PNPIIDGRKAN 103

Query: 259 VNV----AEEXXXXXXXXRYIWRCTTTRLLRKRHDSTPDTGLDPIIILPSILV 113
           VN+    A+           + +   T L+++ +  TP     P I+ PS+++
Sbjct: 104 VNLAYLGAKPRSLQTGFAVGVQQLHPT-LIQRTYGLTPHYIYPPAIVQPSVVI 155



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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDA-RVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           VD+  L + FS  G ++   +++ D D+G S+GF F+  AS E  D A+ A++GQ L  R
Sbjct: 111 VDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNR 170

Query: 268 ALRVNVA 248
           A+ V+ A
Sbjct: 171 AITVSYA 177



 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +S L EL  + G VV   +  DR T   +GFGFV    +E+ D AI  L+   L G+ 
Sbjct: 24  VSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKP 83

Query: 265 LRVNVA 248
           ++VN A
Sbjct: 84  IKVNKA 89



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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD RL   FS  G +  A+++ D + G+S+GFGFV   + EE + A+  ++ + L G+ 
Sbjct: 375 VDDERLKAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKP 433

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 434 LYVALAQ 440



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + +    +LF + G++    +V D++  + RGFGFV  A+ E    A+  L+ +  +G+ 
Sbjct: 272 ITEQEFSDLFGQFGEITSLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKK 330

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 331 LYVGRAQK 338



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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 20/38 (52%), Positives = 30/38 (78%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           E FS+ G ++DA+++ D+DTG+SRGFGFVT  S + +D
Sbjct: 261 EFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVD 298



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA---LDGQSLE 275
           +  L E F ++G V D +++ D  TGRSRGFGF++      +D+ +     LDG+ ++
Sbjct: 172 EDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVID 229



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>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 445 VDDSRLVELF-SEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           V +S+L ELF + +     A++V+D+ TG S+G+GFV   + +E   A++ + G  L GR
Sbjct: 174 VTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGR 233

Query: 268 ALRV 257
           A++V
Sbjct: 234 AIKV 237



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>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/61 (39%), Positives = 34/61 (55%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           +LFS +G++ +  V  D  TG S+GF +V  A  EE   A   LD Q  +GR L +  A+
Sbjct: 343 KLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQIFQGRLLHILAAD 402

Query: 244 E 242
           E
Sbjct: 403 E 403



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ELF+  G++   RV    D   +RGF FV     +E ++A+  L G  L GR L +  AE
Sbjct: 756 ELFNSFGQLKSVRVPKKFDKS-ARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVMQPAE 814

Query: 244 E 242
           +
Sbjct: 815 Q 815



 Score = 32.0 bits (71), Expect = 0.71
 Identities = 15/54 (27%), Positives = 32/54 (59%)
 Frame = -3

Query: 406 GKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           G + D R++ +R+ G+SR F F+   ++++  DA+   DG  +    + V++A+
Sbjct: 37  GLITDLRILKNRE-GKSRRFAFIGYKNEQDALDAVNYFDGSFIYTSKIEVDMAK 89



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -3

Query: 358 SRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           S GFGFV   ++E+    I+A+DG  ++G  +++ ++
Sbjct: 685 SMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLS 721



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>SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2|
          Length = 991

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS+HGKV+ A+VV +  +  +R +GFVTM++ +E    I+ L    L GR + V  
Sbjct: 467 LKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEK 526

Query: 250 AE 245
           A+
Sbjct: 527 AK 528



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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + +  L  +F   G++   +++ D +TGRS+G+GF+T +  E    A+  L+G  L GR 
Sbjct: 261 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP 320

Query: 265 LRVNVAEEXXXXXXXXRYI 209
           ++V    E         ++
Sbjct: 321 MKVGHVTERTDASSASSFL 339



 Score = 36.6 bits (83), Expect = 0.029
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L E FS  GKV D R++ DR++ RSRG  +V       +  AI  L GQ + G  + V  
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI-GLTGQRVLGVPIIVQA 227

Query: 250 AE 245
           ++
Sbjct: 228 SQ 229



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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + +  L  +F   G++   +++ D +TGRS+G+GF+T +  E    A+  L+G  L GR 
Sbjct: 261 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP 320

Query: 265 LRVNVAEEXXXXXXXXRYI 209
           ++V    E         ++
Sbjct: 321 MKVGHVTERTDASSASSFL 339



 Score = 35.8 bits (81), Expect = 0.049
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L E FS  GKV D R++ DR++ RS+G  +V       +  AI  L GQ + G  + V  
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQA 227

Query: 250 AE 245
           ++
Sbjct: 228 SQ 229



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>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D+ L + F   G + +A V+ DR TG+SRG+GFVTMA +   + A        ++GR   
Sbjct: 24  DASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD-PNPIIDGRKAN 82

Query: 259 VNV----AEEXXXXXXXXRYIWRCTTTRLLRKRHDSTPDTGLDPIIILPSILV 113
           VN+    A+           + +   T L+++ +  TP     P I+ PS+++
Sbjct: 83  VNLAYLGAKPRSLQTGFAIGVQQLHPT-LIQRTYGLTPHYIYPPAIVQPSVVI 134



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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + +  L  +F   GK+ +  ++ D DTGRS+G+GF+T +  E    A+  L+G  L GR 
Sbjct: 274 ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRP 333

Query: 265 LRVNVAEE 242
           +RV    E
Sbjct: 334 MRVGHVTE 341



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L + FS  GKV D R++ DR++ RS+G  +V     + +  AI  L GQ L G  + V  
Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQA 240

Query: 250 AE 245
           ++
Sbjct: 241 SQ 242



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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD +L E F+ +G +  A+V+   + G+S+GFGFV  ++ EE   AI   + Q + G+ 
Sbjct: 332 VDDEKLEEEFAPYGTITSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKP 390

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 391 LYVAIAQ 397



 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 36/66 (54%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D +  ELF++ G +V A +  D D G+ +GFGFV     E+   A+ AL+   L G  L 
Sbjct: 231 DEQFQELFAKFGPIVSASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLY 289

Query: 259 VNVAEE 242
           V  A++
Sbjct: 290 VGRAQK 295



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L + FS  G ++ +++  D + G+S+GFGFV    +    +AI AL+G  L G+ 
Sbjct: 136 IDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 194

Query: 265 LRV 257
           + V
Sbjct: 195 IYV 197



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>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 38/67 (56%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + +  L ++FS+ G V   R++ +  T  SRGFGF++ ++ EE   AI  L+ Q   GR 
Sbjct: 112 MQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRV 171

Query: 265 LRVNVAE 245
           L V  A+
Sbjct: 172 LNVQKAK 178



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>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 21/67 (31%), Positives = 42/67 (62%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++  L  +F +HG + +  ++ DR T +SRGF F+T  +  +  +A   ++G+SL G+A+
Sbjct: 20  NEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAI 78

Query: 262 RVNVAEE 242
           +V  A++
Sbjct: 79  KVEQAKK 85



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>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +++ L +LF   G V   ++V D  T + +G+GFV+M + +E   AI AL+G ++  R L
Sbjct: 450 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 509

Query: 262 RVN 254
           +V+
Sbjct: 510 QVS 512



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>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +++ L +LF   G V   ++V D  T + +G+GFV+M + +E   AI AL+G ++  R L
Sbjct: 414 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 473

Query: 262 RVN 254
           +V+
Sbjct: 474 QVS 476



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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 23/68 (33%), Positives = 40/68 (58%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L + FS+ G +   +++ D + G+S+GFGFV  ++ EE  DA+    GQ   G+ 
Sbjct: 315 VTEEELRKHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKP 373

Query: 265 LRVNVAEE 242
           L V +A++
Sbjct: 374 LYVAIAQK 381



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L + F+E   +   R+  D  +GRS  +G+    S+++ + AI   +   L G+ 
Sbjct: 35  VTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKM 94

Query: 265 LRV 257
           +RV
Sbjct: 95  IRV 97



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V ++ L ++F + G +V  +V    D G+SRG+GFV    ++    AI  L+   +  + 
Sbjct: 123 VTNAVLQDMFKKFGNIVSCKVATLED-GKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKE 181

Query: 265 LRV 257
           + V
Sbjct: 182 IYV 184



 Score = 31.6 bits (70), Expect = 0.93
 Identities = 19/68 (27%), Positives = 32/68 (47%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L E F+E GK+V   +  D +    RG+ FV   + E+   A   ++G     + 
Sbjct: 212 VSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKC 270

Query: 265 LRVNVAEE 242
           L V  A++
Sbjct: 271 LYVGRAQK 278



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>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + GK+ D  V+ D  T RSRGFGFVT +  EE+D +++A    +DG+ +E
Sbjct: 40  DDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVE 98



 Score = 36.2 bits (82), Expect = 0.038
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F  +GK+    V+ DR +G+ RGF FVT    + +D  +
Sbjct: 130 EEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176



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>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + GK+ D  V+ D  T RSRGFGFVT +  EE+D +++A    +DG+ +E
Sbjct: 40  DDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVDGRVVE 98



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L +    +GK+    V+ DR +G+ RGF FVT    + +D  +
Sbjct: 130 EEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176



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>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2|
          Length = 953

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS++GKVV A+VV +  +  +R +GFVTM++ +E    I+ L    L GR + V  
Sbjct: 423 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEK 482

Query: 250 AE 245
           A+
Sbjct: 483 AK 484



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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 25/67 (37%), Positives = 42/67 (62%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V+D +L E+FSE+G V   +V+ +   G SRGFGFV  ++ EE   A+  ++G+ +  + 
Sbjct: 339 VNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKP 397

Query: 265 LRVNVAE 245
           L V +A+
Sbjct: 398 LYVALAQ 404



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/63 (34%), Positives = 33/63 (52%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +D+  L E FS  G ++  +V  D   GRS+G+GFV    +E    AI  L+G  L  + 
Sbjct: 143 IDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQ 201

Query: 265 LRV 257
           + V
Sbjct: 202 VFV 204



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>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1|
          Length = 396

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L ++F + GK++D  ++++     S+GFGFVT  +  + D A   L G  +EGR + 
Sbjct: 129 DPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 186

Query: 259 VNVA 248
           VN A
Sbjct: 187 VNNA 190



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>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)|
           (Hexaribonucleotide-binding protein 2) (Repressor of
           tamoxifen transcriptional activity)
          Length = 390

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L ++F + GK++D  ++++     S+GFGFVT  +  + D A   L G  +EGR + 
Sbjct: 134 DPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 191

Query: 259 VNVA 248
           VN A
Sbjct: 192 VNNA 195



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>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1|
          Length = 397

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L ++F + GK++D  ++++     S+GFGFVT  +  + D A   L G  +EGR + 
Sbjct: 130 DPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREKLHGTVVEGRKIE 187

Query: 259 VNVA 248
           VN A
Sbjct: 188 VNNA 191



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>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 26/66 (39%), Positives = 39/66 (59%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD+  L + FS  G++V A  V   + GRS+G+GFV+  S E  D AI A++ Q L  + 
Sbjct: 110 VDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKP 169

Query: 265 LRVNVA 248
           + V+ A
Sbjct: 170 ITVSYA 175



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V DS L EL  + G VV+  +  DR      GFGF     +++++ A   L+   L G+ 
Sbjct: 22  VTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKP 81

Query: 265 LRVNVAEE 242
           +RVN A +
Sbjct: 82  IRVNRASQ 89



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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V D +L + FS    +  A VV D +  RSRGFGFV+ A +++  +A+A        G  
Sbjct: 37  VTDEQLADFFSNFAPIKHAVVVKDTNK-RSRGFGFVSFAVEDDTKEALAKARKTKFNGHI 95

Query: 265 LRVNVAE 245
           LRV++A+
Sbjct: 96  LRVDIAK 102



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D  +L ++F  +G VV+A +   RD G+  GF FVTM        A+       ++GR +
Sbjct: 160 DPVKLKKIFGRYGTVVEATIPRKRD-GKLCGFAFVTMKKISNCRIALENTKDLKIDGRKV 218

Query: 262 RVNVA 248
            V+ A
Sbjct: 219 AVDFA 223



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>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/80 (32%), Positives = 38/80 (47%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L   F   G + D ++  D +T + RGF FV     E+   AI  ++   L GR 
Sbjct: 17  VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRT 76

Query: 265 LRVNVAEEXXXXXXXXRYIW 206
           +RVN+A+         R +W
Sbjct: 77  IRVNLAKPMRIKEGSSRPVW 96



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>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 26/80 (32%), Positives = 38/80 (47%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VDD  L   F   G + D ++  D +T + RGF FV     E+   AI  ++   L GR 
Sbjct: 17  VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRT 76

Query: 265 LRVNVAEEXXXXXXXXRYIW 206
           +RVN+A+         R +W
Sbjct: 77  IRVNLAKPMRIKEGSSRPVW 96



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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           + AR+V DRDTG S+GFGFV  +S E+   A  A++   ++G  + ++ A+
Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAK 627



 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/52 (23%), Positives = 30/52 (57%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           ++ R+V +++ G S+G  ++   ++ E + A+    G  ++GRA+ ++   E
Sbjct: 395 LEVRLVLNKE-GSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGE 445



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>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + G + D  V+ D  T RSRGFGFVT +  EE+D A+ A    +DG+ +E
Sbjct: 48  DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE 106



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    V+ DR +G+ RGF FVT    + +D  +
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184



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>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + G + D  V+ D  T RSRGFGFVT +  EE+D A+ A    +DG+ +E
Sbjct: 48  DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE 106



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    V+ DR +G+ RGF FVT    + +D  +
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184



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>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G + D  V+ D +T RSRGFGFVT A+ EE+D A+ A    +DG+ +E
Sbjct: 26  DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE 84



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    ++ DR +G+ RGF FVT    + +D  +
Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162



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>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G + D  V+ D +T RSRGFGFVT A+ EE+D A+ A    +DG+ +E
Sbjct: 26  DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE 84



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    ++ DR +G+ RGF FVT    + +D  +
Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162



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>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G + D  V+ D +T RSRGFGFVT A+ EE+D A+ A    +DG+ +E
Sbjct: 26  DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE 84



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    ++ DR +G+ RGF FVT    + +D  +
Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162



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>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + G + D  V+ D  T RSRGFGFVT +  EE+D A+ A    +DG+ +E
Sbjct: 48  DDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE 106



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    V+ DR +G+ RGF FVT    + +D  +
Sbjct: 138 EEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184



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>SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B) (HSP27 estrogen response element-TATA
           box-binding protein) (HSP27 ERE-TATA-binding protein)
          Length = 915

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 25/62 (40%), Positives = 37/62 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS++GKVV A+VV +  +  +R +GFVTM++ EE    I  L    L G+ + V  
Sbjct: 422 LKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 481

Query: 250 AE 245
           A+
Sbjct: 482 AK 483



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>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 34/51 (66%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V+AR+V DRDTG S+GFGFV  ++ E+   A  A++   ++G  + ++ A+
Sbjct: 526 VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAK 576



 Score = 36.2 bits (82), Expect = 0.038
 Identities = 13/43 (30%), Positives = 29/43 (67%)
 Frame = -3

Query: 373 RDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ++ GR++GF F+  +S E+  DA+ + +   +EGR++R+  ++
Sbjct: 444 QNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQ 486



 Score = 28.9 bits (63), Expect = 6.0
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -3

Query: 382 VYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           + D   G S+ FG+V  +S+EE++ A+  L G+ + G  +++  A
Sbjct: 263 IQDIRIGNSKKFGYVDFSSEEEVEKAL-KLTGKKILGTEVKIEKA 306



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>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G + D  V+ D +T RSRGFGFVT A+ EE+D A+ A    +DG+ +E
Sbjct: 26  DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE 84



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    ++ DR +G+ RGF FVT    + +D  +
Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162



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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/58 (32%), Positives = 35/58 (60%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           F  +G + D  +  D+ + +S+GFGFV    + + + A+   DG+ ++GR LRV +A+
Sbjct: 39  FERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAK 96



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>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor|
           B1) (SAF-B)
          Length = 931

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 25/62 (40%), Positives = 36/62 (58%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  LFS +GKVV A+VV +  +  +R +GFVTM++ EE    I  L    L G+ + V  
Sbjct: 444 LKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCINHLHKTELHGKMISVEK 503

Query: 250 AE 245
           A+
Sbjct: 504 AK 505



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>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L E F + G + D  V+ D ++ RSRGFGFVT  S +E+D A+ A    +DG+ +E
Sbjct: 27  DESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDGRVVE 85



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L E F ++GK+    ++ DR +G+ RGF FVT    + +D  +
Sbjct: 117 EEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163



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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA----ALDGQSLE 275
           D  + E +S+ G++ D  V+ D  T RSRGFGFVT + + E+D A+      +DG++++
Sbjct: 36  DDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVD 94



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           +  L E F+++G V  + ++ D+ T + RGFGFVT    + +D  +
Sbjct: 127 EDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172



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>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +  L   + + GK+ D  V+ D  + RSRGFGFVT +S  E+D A+AA    S++GR +
Sbjct: 34  EESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP-HSIDGRVV 91



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F E+GK+    ++ DR +G+ RGFGFVT    + +D  +
Sbjct: 124 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170



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>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 38/59 (64%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           ++ +FS++G++V+  +V D+ TG+S+GF F+    Q     A+   +G  ++GR +RV+
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVD 110



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>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 24/59 (40%), Positives = 36/59 (61%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +  L   + + GK+ D  V+ D  + RSRGFGFVT +S  E+D A+AA    S++GR +
Sbjct: 22  EESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP-HSIDGRVV 79



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F E+GK+    ++ DR +G+ RGFGFVT    + +D  +
Sbjct: 112 EEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158



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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/59 (32%), Positives = 38/59 (64%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           ++ +FS++G++V+  +V D+ TG+S+GF F+    Q     A+   +G  ++GR +RV+
Sbjct: 52  IICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVD 110



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>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -3

Query: 442 DDSRLVELF-SEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +DS L   F S +     A+++ D  TG SR +GFV  +S++E   A+  + G   +GR 
Sbjct: 194 EDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRP 253

Query: 265 LRVNVA 248
           LR++VA
Sbjct: 254 LRISVA 259



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>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 20/60 (33%), Positives = 35/60 (58%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           LFS++G + +  +  D  TG+S+GF +V    +E+   A  +LD Q  +GR L +  A++
Sbjct: 329 LFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADK 388



 Score = 37.0 bits (84), Expect = 0.022
 Identities = 23/63 (36%), Positives = 34/63 (53%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L+ELF   G++   RV    D   +RGF FV     +E + A++ L+G  L GR L +  
Sbjct: 733 LLELFGAFGQLKSVRVPKKFDQS-ARGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQY 791

Query: 250 AEE 242
           AE+
Sbjct: 792 AEQ 794



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 15/39 (38%), Positives = 26/39 (66%)
 Frame = -3

Query: 358 SRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           S GFGFV   ++E+ + AI+ LDG  L+G  L++ ++ +
Sbjct: 662 SMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLSHK 700



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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           +LFS +G++ +  V  D  TG+S+GF +V     E   +A   LD Q  +GR L +  A+
Sbjct: 319 QLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELDKQIFQGRLLHILPAD 378



 Score = 35.4 bits (80), Expect = 0.065
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ELFS  G++   RV    D   +RGF FV      E ++A+  L G  L GR L +  AE
Sbjct: 730 ELFSSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYAE 788

Query: 244 E 242
           +
Sbjct: 789 Q 789



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 370 DTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           D   S GFGF+   ++E+    IAA+DG  ++G  +++ ++ +
Sbjct: 653 DKKLSMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKISHK 695



 Score = 31.6 bits (70), Expect = 0.93
 Identities = 15/53 (28%), Positives = 31/53 (58%)
 Frame = -3

Query: 403 KVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ++ D ++V D+ +G SR F F+   S+++  DAI   +G  ++   + V +A+
Sbjct: 36  QITDVKIVKDK-SGNSRRFAFIGYRSEQDAFDAIEYFNGSFIDTARIEVAMAK 87



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>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X|
           protein 1)
          Length = 415

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 35/64 (54%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L  +F + G V D  ++++     S+GFGFVTM   ++ + A   L G  +EGR + 
Sbjct: 166 DPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQELHGSMIEGRKIE 223

Query: 259 VNVA 248
           VN A
Sbjct: 224 VNCA 227



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>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L E F E+GK+    ++ D+ +G+ RGFGFVT    + +D  +
Sbjct: 112 EEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           +  L   + + G++ D  V+ D  + RSRGFGFVT +   E+D A++A    +DG+ +E
Sbjct: 22  EESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVE 80



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>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L + F + G++VD  V+ D  T RSRGFGF+T +    +DDA  A    +DG+ +E
Sbjct: 30  DESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVE 88



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>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G + D  V+ D +T RSRGFGFVT A+ E++D A+ A    +DG+ +E
Sbjct: 26  DESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNARPHKVDGRVVE 84



 Score = 36.2 bits (82), Expect = 0.038
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L + F ++GK+    ++ DR +G+ RGF FVT      +D  +
Sbjct: 116 EEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 162



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>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 728

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L E+FS  G VV A ++ D+D G+SRG G VT     E   AI+  +GQ L  R + V 
Sbjct: 217 KLKEVFSMAGVVVRADILEDKD-GKSRGIGIVTFEQSIEAVQAISMFNGQLLFDRPMHVK 275

Query: 253 VAE 245
           + E
Sbjct: 276 MDE 278



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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = -3

Query: 400 VVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V   R+V D  T RSRGFG+V   + + L  A+ AL G+ L GR +R+ VAE
Sbjct: 118 VTSIRLVIDPLTERSRGFGYVEFETADTLSAAL-ALSGEDLMGRPVRITVAE 168



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>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/66 (33%), Positives = 36/66 (54%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           DD R  +LFS +G++ +  +  D  TG+S+GF +V   + +    A   LD Q  +GR L
Sbjct: 344 DDFR--KLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRLL 401

Query: 262 RVNVAE 245
            +  A+
Sbjct: 402 HILPAD 407



 Score = 34.3 bits (77), Expect = 0.14
 Identities = 22/61 (36%), Positives = 31/61 (50%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ELFS  G++   RV    D   +RGF FV     +E ++A+  L G  L GR L +   E
Sbjct: 770 ELFSSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMEFVE 828

Query: 244 E 242
           +
Sbjct: 829 Q 829



 Score = 30.4 bits (67), Expect = 2.1
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -3

Query: 358 SRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           S GFGF    ++E+ +  I+A++G  L+G  L++ ++
Sbjct: 696 SMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLS 732



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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 598 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 648



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = -3

Query: 364 GRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           G+S+G+ F+  AS E+  +A+ + +   +EGR +R+ +
Sbjct: 522 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLEL 559



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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 597 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 647



 Score = 35.0 bits (79), Expect = 0.084
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = -3

Query: 382 VYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           V     G+S+G+ F+  AS E+  +A+ + + + +EGRA+R+ +
Sbjct: 515 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLEL 558



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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 592 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 642



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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 645



 Score = 35.0 bits (79), Expect = 0.084
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = -3

Query: 382 VYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           V     G+S+G+ F+  AS E+  +A+ + + + +EGRA+R+ +
Sbjct: 513 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLEL 556



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>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 729

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L E+FS  G VV A ++ D+D G+SRG G VT     E   AI+  +GQ L  R + V 
Sbjct: 218 KLKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVK 276

Query: 253 VAE 245
           + E
Sbjct: 277 MDE 279



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>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4|
           protein)
          Length = 689

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 26/63 (41%), Positives = 36/63 (57%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L E+FS  G VV A ++ D+D G+SRG G VT     E   AI+  +GQ L  R + V 
Sbjct: 178 KLKEVFSMAGVVVRADILEDKD-GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVK 236

Query: 253 VAE 245
           + E
Sbjct: 237 MDE 239



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>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 22/66 (33%), Positives = 36/66 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L+E FS+ G V  A ++ D+ +G+ RGFGFV   + +  D A A +    ++G  
Sbjct: 109 VAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA-AVVKFHPIQGHR 167

Query: 265 LRVNVA 248
           + V  A
Sbjct: 168 VEVKKA 173



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA----ALDGQSLE 275
           F   G + D  VV +  T RSR FGFVT ++ EE D A+A    A+DG ++E
Sbjct: 27  FEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVE 78



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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           +LFS  G++ +  V  D  TG+S+GF +V     +   +A   LD Q  +GR L +   E
Sbjct: 363 KLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQIFQGRLLHILPGE 422

Query: 244 E 242
           E
Sbjct: 423 E 423



 Score = 35.4 bits (80), Expect = 0.065
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           ELF+  G++   RV    D   +RGF FV     +E ++A+  L G  L GR L +  AE
Sbjct: 781 ELFNSFGQLKSVRVPKKFDKS-ARGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVMQYAE 839

Query: 244 E 242
           E
Sbjct: 840 E 840



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 15/52 (28%), Positives = 31/52 (59%)
 Frame = -3

Query: 400 VVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           + D +++ DR+ G SR FGF+   ++E+  DA+   +G  +    + V++A+
Sbjct: 43  ITDVKILRDRN-GESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVSMAK 93



 Score = 33.1 bits (74), Expect = 0.32
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = -3

Query: 358 SRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           S GFGFV   ++E+ +  IAA+DG  ++G  +++ ++
Sbjct: 708 SMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLS 744



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>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L E F+  G V +  ++YD +  R RGFGF+T   ++ +D A+  +    + G+ + 
Sbjct: 127 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVE 185

Query: 259 VNVAE 245
           V  AE
Sbjct: 186 VKRAE 190



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           FS++G+VVD  ++ D+ T +SRGFGFV       +   +A+    LDG++++
Sbjct: 30  FSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 596 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 646



 Score = 35.0 bits (79), Expect = 0.084
 Identities = 14/44 (31%), Positives = 28/44 (63%)
 Frame = -3

Query: 382 VYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           V     G+S+G+ F+  AS E+  +A+ + + + +EGRA+R+ +
Sbjct: 514 VPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLEL 557



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>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 20/51 (39%), Positives = 33/51 (64%)
 Frame = -3

Query: 397 VDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           V AR+V DR+TG S+GFGFV   S+E+   A  A++   ++G  + ++ A+
Sbjct: 595 VRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAK 645



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = -3

Query: 364 GRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           G+S+G+ F+  AS E+  +A+ + +   +EGR +R+ +
Sbjct: 519 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLEL 556



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>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 16/56 (28%), Positives = 33/56 (58%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           LFS++G ++  +++YD+  G   G+GF++     +    I  L+G+++ G  L +N
Sbjct: 214 LFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFIN 269



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>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/60 (30%), Positives = 35/60 (58%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           + ++++L S  G V++ ++++D  TGRS+G+ F+     E    A+  L+G  L  R L+
Sbjct: 31  EEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSRFLK 90



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>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I|
          Length = 219

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 22/66 (33%), Positives = 40/66 (60%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V+D  L + FSE+  +V  +VV DR+ G++RGFGFV+    ++   A    +G+ +  R 
Sbjct: 41  VNDESLYQAFSEYPSLVKTKVVRDRE-GKTRGFGFVSFKDSDQFLKAWREKNGKYIGSRP 99

Query: 265 LRVNVA 248
           ++++ A
Sbjct: 100 VKLSRA 105



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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L E F + G V +  ++YD +  R RGFGF+T   ++ +D A+  +    + G+ + 
Sbjct: 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVE 184

Query: 259 VNVAE 245
           V  AE
Sbjct: 185 VKRAE 189



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           FS++G+VVD  ++ D+ T +SRGFGFV       +   +A+    LDG++++
Sbjct: 30  FSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



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>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L E F + G V +  ++YD +  R RGFGF+T   ++ +D A+  +    + G+ + 
Sbjct: 126 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDIMGKKVE 184

Query: 259 VNVAE 245
           V  AE
Sbjct: 185 VKRAE 189



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           FS++G+VVD  ++ D+ T +SRGFGFV       +   +A+    LDG++++
Sbjct: 30  FSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNID 81



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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           D+  + + F   G +VD  +V D++TG+ RGF FV     + +D  +     Q L G+ +
Sbjct: 134 DEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQ-LNGKMV 192

Query: 262 RVNVA 248
            V  A
Sbjct: 193 DVKKA 197



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G +VD  V+ D  T RSRGFGF+T +    +D+A  +    +DG+ +E
Sbjct: 44  DENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVE 102



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>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           D+  L E F + G++V   +V D+DTG+ RGF F+     + +D  I
Sbjct: 127 DEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173



 Score = 40.4 bits (93), Expect = 0.002
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA----LDGQSLE 275
           D  L   F + G +VD  V+ D  T RSRGFGF+T +    +D+A  A    +DG+++E
Sbjct: 37  DDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKIDGRTVE 95



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>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           L + FS+ G+VVD  +  D  TGRSRGFGFV     E +D
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVD 152



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>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/40 (50%), Positives = 25/40 (62%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           L + FS+ G+VVD  +  D  TGRSRGFGFV     E +D
Sbjct: 113 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVD 152



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>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)|
           (Increased sodium tolerance protein 3)
          Length = 148

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           ++ +FSE+G  VD  +  D +TG S+GF ++    Q     A+  L+G  + GRAL+++
Sbjct: 47  ILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKIGGRALKID 105



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>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQE 320
           + F + GKV DA +++D+ T R RGFGFVT  S++
Sbjct: 127 QYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA 299
           L E F + G+V +  V+ D  T RSRGFGFVT   Q  +D  +A
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79



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>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding|
           subunit (eIF-3 RNA-binding subunit) (eIF3 p33)
           (Translation initiation factor eIF3, p33 subunit)
          Length = 274

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++S   EL      +    VV +++TG+SRG  FVT +S+E  + A+  LDG+      L
Sbjct: 204 ENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYMNLIL 263

Query: 262 RV 257
           RV
Sbjct: 264 RV 265



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>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDA-RVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++ L+ LF    K V   RV+ D  TG SR FGFV    ++E   A+  + G+  +GRAL
Sbjct: 205 EADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRAL 264

Query: 262 RVNVA 248
           RV  A
Sbjct: 265 RVAYA 269



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>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 24/105 (22%), Positives = 45/105 (42%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V + ++ E+F++ G V   ++V D +TG  +G+GF      E    A+  L+   L  R 
Sbjct: 18  VSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSELGPRK 77

Query: 265 LRVNVAEEXXXXXXXXRYIWRCTTTRLLRKRHDSTPDTGLDPIII 131
           +RV              Y  R       +  H+S+ ++   P ++
Sbjct: 78  IRVEFPSNDPRRNQSYEYTERTDRYMEQQNAHESSYNSRFIPPVL 122



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>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/63 (26%), Positives = 36/63 (57%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S+L   F  +G +    +VY++ +G+ RG+ F+    + ++  A    DG+ ++GR + 
Sbjct: 116 ESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 175

Query: 259 VNV 251
           V+V
Sbjct: 176 VDV 178



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>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1|
          Length = 819

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S L  +FS  GK+ +  V +D     S+GF +V  A  +   +A   LDG+  +GR L 
Sbjct: 308 ESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNLDGKIFQGRLLH 367

Query: 259 VNVAEE 242
           +  A +
Sbjct: 368 ILPASQ 373



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           LF  +G++   RV    D   +RGFGF    S  E ++A+ AL    L GR L +  A E
Sbjct: 716 LFGAYGQLRSVRVPKKFDRS-ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANE 774



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>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTM---ASQEE-LDDAIAALDGQSLE 275
           L + F++ G+VVD  +  D +TGRSRGFGF+     AS E+ LD     LDG+ ++
Sbjct: 84  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVID 139



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>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2|
          Length = 383

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           D  LV+L   +GK+V  + + D+ T + +G+GFV   S      A+ AL    ++ +
Sbjct: 71  DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTALKASGVQAQ 127



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE 275
           +D+  L  +    G+V+  R++ D  +G SRG GF  M S E+ +  I   +G+ ++
Sbjct: 148 MDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHFNGKYIK 203



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>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 16/38 (42%), Positives = 27/38 (71%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           + F + GKV DA +++D+ T R RGFGFVT  +++ ++
Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 165



 Score = 37.7 bits (86), Expect = 0.013
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           L + FS+ G++ +  V+ D  T RSRGFGFVT A    +D  +
Sbjct: 37  LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79



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>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQE 320
           F + GKV DA +++D+ T R RGFGFVT  S++
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA 299
           L E F + G+V +  V+ D  T RSRGFGFVT   Q  +D  +A
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79



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>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQE 320
           F + GKV DA +++D+ T R RGFGFVT  S++
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESED 161



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA 299
           L E F + G+V +  V+ D  T RSRGFGFVT   Q  +D  +A
Sbjct: 36  LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA 79



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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           VD+S L E F + G +V  R+V +  TG  RGFG+V   + + +  A+  L+   L GR 
Sbjct: 296 VDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRK 354

Query: 265 LRV 257
           LRV
Sbjct: 355 LRV 357



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>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 16/38 (42%), Positives = 27/38 (71%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           + F + GKV DA +++D+ T R RGFGFVT  +++ ++
Sbjct: 128 QYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVE 165



 Score = 37.7 bits (86), Expect = 0.013
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           L + FS+ G++ +  V+ D  T RSRGFGFVT A    +D  +
Sbjct: 37  LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79



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>TRA2_DROME (P19018) Transformer-2 sex-determining protein|
          Length = 264

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALD---GQSLEGRALRVN 254
           ELF+++G +   ++V D  T RSRGF F+     E+L DA AA D   G  ++GR +RV+
Sbjct: 115 ELFNKYGPIERIQMVIDAQTQRSRGFCFIYF---EKLSDARAAKDSCSGIEVDGRRIRVD 171



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>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFV----TMASQEELDDAIAALDGQSLE 275
           L + F++ G+VVD  +  D +TGRSRGFGF+    + + ++ LD     LDG+ ++
Sbjct: 91  LKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVID 146



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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           ++DS L E F + G +V  R+V +  TG  RGFG+V   + + +  A+  L+   L GR 
Sbjct: 302 IEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRK 360

Query: 265 LRV 257
           LRV
Sbjct: 361 LRV 363



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>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           L + FS+ G VVD  +  D  TGRSRGFGFV     E +D
Sbjct: 111 LKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVD 150



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>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = -3

Query: 442 DDSRLVEL---FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEG 272
           DD+R  +L   F  +G +VD  V  D  T R RGF +V      + +DA+  LD + + G
Sbjct: 19  DDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICG 78

Query: 271 RALRVNVAE 245
           R + +  A+
Sbjct: 79  RQIEIQFAQ 87



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>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = -3

Query: 442 DDSRLVEL---FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEG 272
           DD+R  +L   F  +G +VD  V  D  T R RGF +V      + +DA+  LD + + G
Sbjct: 19  DDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICG 78

Query: 271 RALRVNVAE 245
           R + +  A+
Sbjct: 79  RQIEIQFAQ 87



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>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S+L   F  +G +    +VY + +G+ RG+ F+    + ++  A    DG+ ++GR + 
Sbjct: 116 ESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 175

Query: 259 VNV 251
           V+V
Sbjct: 176 VDV 178



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>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           D  LV+L   +GK+V  + + D+ T + +G+GFV   S      A++AL    ++ +
Sbjct: 75  DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQ 131



 Score = 35.4 bits (80), Expect = 0.065
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE 275
           +D+  L  +    G+V+  R++ D  +G SRG GF  M S E+ +  I   +G+ ++
Sbjct: 152 MDEQELENMLKPFGQVISTRILRD-SSGTSRGVGFARMESTEKCEAVIGHFNGKFIK 207



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>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2|
           (Suppressor of CDC2 with RNA-binding motif 3)
          Length = 407

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           D  LV+L   +GK+V  + + D+ T + +G+GFV   S      A+ AL    ++ +
Sbjct: 69  DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQ 125



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE 275
           +D+  L  +    G+V+  R++ D  +G SRG GF  M S E+ +  I   +G+ ++
Sbjct: 146 MDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHFNGKYIK 201



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>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70|
           kDa) (snRNP70)
          Length = 448

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S+L   F  +G +    +VY + +G+ RG+ F+    + ++  A    DG+ ++GR + 
Sbjct: 116 ESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVL 175

Query: 259 VNV 251
           V+V
Sbjct: 176 VDV 178



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>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 23/80 (28%), Positives = 37/80 (46%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L   F   G + D ++  D ++ R RGF F+     E+   AI  ++   L GR 
Sbjct: 17  VTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRT 76

Query: 265 LRVNVAEEXXXXXXXXRYIW 206
           +RVN+A+         + IW
Sbjct: 77  IRVNLAKPVRVKEDSFKPIW 96



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>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/65 (30%), Positives = 38/65 (58%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++S L + FS++G V + ++V DR  G S+G+GFVT  +QE+    +   +  + + + L
Sbjct: 45  NESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 103

Query: 262 RVNVA 248
            +  A
Sbjct: 104 NIGPA 108



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>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/65 (30%), Positives = 38/65 (58%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           ++S L + FS++G V + ++V DR  G S+G+GFVT  +QE+    +   +  + + + L
Sbjct: 45  NESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKL 103

Query: 262 RVNVA 248
            +  A
Sbjct: 104 NIGPA 108



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>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           D  LV+L   +GK+V  + + D+ T + +G+GFV   S      A++AL    ++ +
Sbjct: 75  DQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPAAAQKAVSALKANGVQAQ 131



 Score = 35.8 bits (81), Expect = 0.049
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE 275
           +D+  L  +    G+V+  RV+ D  +G SRG GF  M S E+ +  I   +G+ ++
Sbjct: 152 MDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIGHFNGKFIK 207



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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/58 (37%), Positives = 30/58 (51%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           L +LFS +G + +     D  T + +GF FVT    E    A A +DGQ  +GR L V
Sbjct: 416 LEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHV 473



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           + R  +LF+  G + D  + + +D G+ R FGF+   S+EE   A+
Sbjct: 15  EERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQAAL 59



 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -3

Query: 424  ELFSEHGKVVDARVVYDRD-TGRSRGFGFVTMASQEELDDAIAAL-DGQSLEGRALRVNV 251
            ELFS  G++   R+      TG  RGFGFV   ++++   A  AL     L GR L +  
Sbjct: 842  ELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 901

Query: 250  AE 245
            A+
Sbjct: 902  AD 903



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>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 24/58 (41%), Positives = 34/58 (58%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           L ++F E G V+ A V  D + G SRGFG V   +++E+  AI   +G  +EGR L V
Sbjct: 235 LKDMFKECGHVLRADVELDFN-GFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEV 291



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           L ELF   G+VV+A ++  +  G  RG G V     E + DAI+  DG     R L V
Sbjct: 138 LKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKFDGALFMDRKLMV 193



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>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           ++  L E F E+GK+    ++ D+ +G+ RGF FVT    + +D  +
Sbjct: 112 EEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA----ALDGQSLE 275
           +  L   + + G + D  V+ D  + RSRGFGFVT +   E+D A+A     +DG+ +E
Sbjct: 22  EESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMATRPHTIDGRVVE 80



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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L + F + G V DA++V D+ +GRS+G  +V    ++ +  AI AL G+ L G  + V +
Sbjct: 256 LYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-ALSGKRLLGLPVIVQL 314

Query: 250 AE 245
            E
Sbjct: 315 TE 316



 Score = 32.3 bits (72), Expect = 0.55
 Identities = 21/97 (21%), Positives = 40/97 (41%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  +  +F   G +    +  D D  RS+GFG++   +     +A+  ++G  L GR +R
Sbjct: 353 DEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMR 411

Query: 259 VNVAEEXXXXXXXXRYIWRCTTTRLLRKRHDSTPDTG 149
           V +  +          + R   T   ++R   +   G
Sbjct: 412 VCLGNDKFTTETTSSMLKRFDETLARQERSQPSQRNG 448



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>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA----ALDGQSLE 275
           L   F   G ++D  V+ + ++GRSRGFGFVT A    ++  +      LDG++++
Sbjct: 23  LSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTID 78



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELD 311
           V ++ L   F+ +GKV +  ++YD++  +SRGFGF++   +  ++
Sbjct: 107 VTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVE 151



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>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L  +FS  GK++   V+ D+ TG S  + F+    ++  ++A + +D   ++ R + 
Sbjct: 266 DEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFEDKKSCEEAYSKMDSVLIDDRRIH 325

Query: 259 VNVAEEXXXXXXXXRYIWRCTT 194
           V+ ++           +WR  T
Sbjct: 326 VDFSQSVSKLSD----VWRSET 343



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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           L +LFS++G + +     D  T + +GF F+T    E    A + +DGQ  +GR L V
Sbjct: 418 LEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHV 475



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDA 305
           + R  +LF+  G + D  + + +D G+ R FGF+   S+EE   A
Sbjct: 15  EERFRQLFAAFGTLTDCSLKFTKD-GKFRKFGFIGFKSEEEAQKA 58



 Score = 28.9 bits (63), Expect = 6.0
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -3

Query: 424  ELFSEHGKVVDARVVYDRD-TGRSRGFGFVTMASQEELDDAIAAL-DGQSLEGRALRVNV 251
            ELFS  G++   R+      TG  RGFGFV   ++++   A  AL     L GR L +  
Sbjct: 850  ELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEW 909

Query: 250  AE 245
            A+
Sbjct: 910  AD 911



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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE-GRAL 263
           +  LV LF + G + D R++ D  +G++RG+ F+T   +E   +A+   D   +  G+ L
Sbjct: 178 EDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHL 237

Query: 262 RVNVA 248
            V ++
Sbjct: 238 GVCIS 242



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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S L  +FS+ GK+ +  V +D  +  S+GF +V     +    A   LDG+  +GR + 
Sbjct: 314 ESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGRLMH 373

Query: 259 V 257
           +
Sbjct: 374 I 374



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           LF  +G++   RV    D   +RGFGF    S  E ++A+ AL    L GR L +  A E
Sbjct: 721 LFGAYGQLRSVRVPKKFDRS-ARGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANE 779



 Score = 34.3 bits (77), Expect = 0.14
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGR-----SRGFGFVTMASQEELDDAIAALDGQSLE 275
           + R  E+F      V AR+    D  R     S GFGFV   ++ +   A+AA+DG  L+
Sbjct: 610 NERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQAALAAMDGYKLD 669

Query: 274 GRALRVNVAEE 242
              L V  + +
Sbjct: 670 QHELVVRASNK 680



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>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V++S + + F + G ++  R+V D+ TG  +GFG+V   + + +  A+  L+   L GR 
Sbjct: 298 VEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KLNNSELMGRK 356

Query: 265 LRV 257
           LRV
Sbjct: 357 LRV 359



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>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein|
           11)
          Length = 281

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L ELF + G +    +  DR+ G+ + FGFV     E +  AIA L+G  L GR 
Sbjct: 21  VREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALLNGIRLYGRP 79

Query: 265 LRV 257
           + V
Sbjct: 80  INV 82



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>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 18/65 (27%), Positives = 38/65 (58%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +++ L + FS++G V + ++V DR  G S+G+GF+T  +QE+    +   +  + + + L
Sbjct: 45  NENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQEAEKLNYKDKKL 103

Query: 262 RVNVA 248
            +  A
Sbjct: 104 NIGPA 108



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>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -3

Query: 418 FSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQ 284
           F +HG V++  ++ D+ TG+ +G  FV  A+ ++ D AI AL  Q
Sbjct: 140 FEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAIRALHNQ 184



 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDG 287
           +  + E+F + G V D  ++ D +  +SRG GFV  +S+E    A+AA+DG
Sbjct: 224 EKEVEEIFLQFGHVEDVYLMRD-EYRQSRGCGFVKYSSKE---TAMAAIDG 270



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>TRA2_DROVI (O02008) Transformer-2 sex-determining protein|
          Length = 272

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALD---GQSLEGRALRVN 254
           ELF++ G +   ++V D  T RSRGF F+     E L DA  A D   G  ++GR +RV+
Sbjct: 123 ELFNKFGPIERIQMVIDAHTHRSRGFCFIYF---ENLGDARVAKDACTGMEVDGRRIRVD 179

Query: 253 VA-EEXXXXXXXXRYIWRCTTT--RLLRKRHDSTPDT 152
            +  +         Y+ R +    R  R+R  ST DT
Sbjct: 180 YSITQRAHTPTPGVYMGRPSRPLGRRSRERDYSTRDT 216



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>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3|
           subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding
           subunit) (eIF3g)
          Length = 256

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 20/63 (31%), Positives = 36/63 (57%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           +++  L +LF + G+V+   +  D+ TG  +GF FVT  S+++   AIA L+   +    
Sbjct: 187 MNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMV 246

Query: 265 LRV 257
           L+V
Sbjct: 247 LKV 249



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>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 461

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 20/84 (23%), Positives = 38/84 (45%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L  +FS  GK++   V+ D+ TG S  + F+   SQ++ + A   + G  ++   + 
Sbjct: 261 DEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYFKMQGVLIDDHRIH 320

Query: 259 VNVAEEXXXXXXXXRYIWRCTTTR 188
           V+ ++            WR  T +
Sbjct: 321 VDFSQSVSKLSES----WRDATVK 340



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>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           D+  L E F + G VV  +++ D+ TG+ RGF FV     + +D AI
Sbjct: 135 DEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIA----ALDGQSLEG 272
           +  L   + + GKVVD  V+ D  T RSRGFGF+T      +D A       +DG+++E 
Sbjct: 45  EENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEA 104

Query: 271 R 269
           +
Sbjct: 105 K 105



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>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -3

Query: 445 VDDSRLVELF-SEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           V++  +  LF S +     A+++ D  T  SRG+GFV    + +   A+A + GQ    R
Sbjct: 197 VNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDR 256

Query: 268 ALRVNVA 248
            +RV +A
Sbjct: 257 PIRVGLA 263



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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           +  LV LF + G + D R++ D  TG +RG+ FVT  ++E   +A+
Sbjct: 85  EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 130



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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           +  LV LF + G + D R++ D  TG +RG+ FVT  ++E   +A+
Sbjct: 175 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220



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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAI 302
           +  LV LF + G + D R++ D  TG +RG+ FVT  ++E   +A+
Sbjct: 175 EDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAV 220



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>BOULE_DROME (Q24207) Protein boule|
          Length = 228

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 21/64 (32%), Positives = 38/64 (59%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L  +FS +G V   +++ DR  G S+G+GFVT  +++E     A  DG+ +  R  +
Sbjct: 46  EADLTRVFSAYGTVKSTKIIVDR-AGVSKGYGFVTFETEQEAQRLQA--DGECVVLRDRK 102

Query: 259 VNVA 248
           +N+A
Sbjct: 103 LNIA 106



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>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)|
          Length = 419

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 21/59 (35%), Positives = 33/59 (55%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           LFS++GK+ +  +V        + FGFV M S+ E D+AI  L    L G A+ V +++
Sbjct: 21  LFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQNLHHYMLNGMAMNVEMSK 71



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>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 22/64 (34%), Positives = 37/64 (57%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L ELFS+ G V    VV ++ +   RGFG+VT +  E++  A+  +   + EG  + V 
Sbjct: 18  QLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCKINVT 75

Query: 253 VAEE 242
           VA++
Sbjct: 76  VAKK 79



 Score = 35.4 bits (80), Expect = 0.065
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALD------GQS 281
           ++  L EL  + G++   R+V   DT  S+G  F    +QE     + A        G  
Sbjct: 346 EEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAASPENEAGGLK 405

Query: 280 LEGRALRVNVA 248
           L+GR L+V++A
Sbjct: 406 LDGRQLKVDLA 416



 Score = 33.1 bits (74), Expect = 0.32
 Identities = 18/61 (29%), Positives = 34/61 (55%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F++ G V++  +    D G+ RGFGFV   +  E   A+  ++ + ++GR + V+ 
Sbjct: 129 LKTVFAQFGAVLEVNIPRKPD-GKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRTVAVDW 187

Query: 250 A 248
           A
Sbjct: 188 A 188



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>HNRPC_MOUSE (Q9Z204) Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 /|
           hnRNP C2)
          Length = 313

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V  S +  +FS++GK+V   V         +GF FV   ++     A+A  DG+ + G+ 
Sbjct: 28  VKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQV 79

Query: 265 LRVNVAEE 242
           L +N+A E
Sbjct: 80  LDINLAAE 87



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>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)|
          Length = 600

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 24/64 (37%), Positives = 35/64 (54%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L E+FS  G V  A +  D+D G+SRG G VT     E   AI+  +GQ L  R + V 
Sbjct: 248 KLKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVK 306

Query: 253 VAEE 242
           + ++
Sbjct: 307 MDDK 310



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>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)|
          Length = 591

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 24/64 (37%), Positives = 35/64 (54%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L E+FS  G V  A +  D+D G+SRG G VT     E   AI+  +GQ L  R + V 
Sbjct: 239 KLKEVFSIAGTVKRADIKEDKD-GKSRGMGTVTFEQAIEAVQAISMFNGQFLFDRPMHVK 297

Query: 253 VAEE 242
           + ++
Sbjct: 298 MDDK 301



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>HNRPC_XENLA (P19600) Heterogeneous nuclear ribonucleoprotein C (hnRNP core|
           protein C)
          Length = 282

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -3

Query: 421 LFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAEE 242
           +FS++GK+V   V         +GF FV  +++     A+A  DG+ + G+ L +N+A E
Sbjct: 37  IFSKYGKIVGCSV--------HKGFAFVQFSNERTARTAVAGEDGRMIAGQVLDINLAAE 88



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>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAA 296
           +  L + F ++G++    V  D  TGRSRGF F+   + E +D   AA
Sbjct: 69  EKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 15/66 (22%), Positives = 33/66 (50%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           + D  +   F + G +V+  + +D+   + +GF F+T  S++ + D +     Q + G+ 
Sbjct: 147 ISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT-PKQKIAGKE 205

Query: 265 LRVNVA 248
           + V  A
Sbjct: 206 VDVKRA 211



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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D+RL E FS+ G V D +++  R  G SR FGFV   S++E   A+   +   ++   + 
Sbjct: 15  DARLREHFSQKGAVTDVKLM-RRPDGTSRKFGFVGYRSEQEAQQALDYFNRTFIDTSRIS 73

Query: 259 VNVAEE 242
           + +A++
Sbjct: 74  IELAKK 79



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           ++  F   G V    +  D+ T  S+G  FV+ +       A  A DG + +GR L +
Sbjct: 330 ILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHL 387



 Score = 31.6 bits (70), Expect = 0.93
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRAL 263
           +LFS  G++   R+    D   +RGFGFV  ++  E   A+ AL    L GR L
Sbjct: 737 DLFSSQGQLKSVRLPKKFDN-TTRGFGFVEYSTVREAQSAMEALKHTHLLGRHL 789



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>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit|
           (eIF3 p90) (Cell cycle regulation and translation
           initiation protein)
          Length = 763

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE 275
           L  LFS+ GKVV+     D  TG+++GF FV   S  +    I +  G+ L+
Sbjct: 99  LTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 150



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>LARK_DROME (Q94901) RNA-binding protein lark|
          Length = 352

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           ELF ++G VV+  +V        R +GFV +    ++ DAI  L+G+ ++G+ L+V V+
Sbjct: 104 ELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVS 154



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = -3

Query: 436 SRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           + L  LF ++G VV+  VV        + +GFV M ++++  DAI  L+G +L   A++V
Sbjct: 21  TELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72

Query: 256 NVAE 245
             A+
Sbjct: 73  EAAK 76



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>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L ELF   G +    +  D+ TG+S+GF F++   +E+   AIA + G   +   L 
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILN 311

Query: 259 VNVAE 245
           V  A+
Sbjct: 312 VEWAK 316



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>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           ++ L ELF   G +    +  D+ TG+S+GF F++   +E+   AIA + G   +   L 
Sbjct: 252 ETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILN 311

Query: 259 VNVAE 245
           V  A+
Sbjct: 312 VEWAK 316



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>HNRPC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 /|
           hnRNP C2)
          Length = 306

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V  S +  +FS++GK+V   V         +GF FV   ++     A+A  DG+ + G+ 
Sbjct: 28  VKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQV 79

Query: 265 LRVNVAEE 242
           L +N+A E
Sbjct: 80  LDINLAAE 87



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>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E)
          Length = 273

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -3

Query: 376 DRDTGRSRGFGFVTMASQEELDDAIAALDGQS---LEGRALRVNVAEEXXXXXXXXRYIW 206
           D  T + RGF FV     EE++DA++A+D  +   + GR +RVNVA          R +W
Sbjct: 4   DYQTEKHRGFAFVEF---EEVEDAMSAIDNMNESEIFGRTIRVNVARPVRIREGWSRPVW 60

Query: 205 RCTTTRLLRKRHDSTPDTGL---DPIIILPS 122
              +     K++ S P  G    +P I+ PS
Sbjct: 61  ---SDENWLKKYGSAPLEGRKLDEPDIVNPS 88



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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  + ++F ++G++       D  +GR   F FV      + +DA+ A DG   +GR 
Sbjct: 20  VREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRR 75

Query: 265 LRV 257
           +RV
Sbjct: 76  IRV 78



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>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 22/64 (34%), Positives = 37/64 (57%)
 Frame = -3

Query: 433 RLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVN 254
           +L ELFS+ G V    VV ++ +   RGFG+VT +  E++  A+  +   + EG  + V 
Sbjct: 18  QLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI--TTFEGCKIDVT 75

Query: 253 VAEE 242
           VA++
Sbjct: 76  VAKK 79



 Score = 35.4 bits (80), Expect = 0.065
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = -3

Query: 442 DDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALD------GQS 281
           ++  L E+  + G +   RVV   DT  S+G  F    +QE     +AA        G  
Sbjct: 336 EEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASPEAEGGGLK 395

Query: 280 LEGRALRVNVA 248
           L+GR L+V++A
Sbjct: 396 LDGRQLKVDLA 406



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNV 251
           L  +F+ +G V++  +    D G+ RGF FV   +  E   A+   + + ++GR + V+ 
Sbjct: 129 LKAVFTHYGTVLEVNIPKKPD-GKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTVAVDW 187

Query: 250 A 248
           A
Sbjct: 188 A 188



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>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           +S++   F  +G +    +V D+ T + +G+ F+      ++  A    DGQ ++GR + 
Sbjct: 151 ESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVL 210

Query: 259 VNV 251
           V+V
Sbjct: 211 VDV 213



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>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)|
          Length = 429

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 22/58 (37%), Positives = 30/58 (51%)
 Frame = -3

Query: 430 LVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           L E FS+ GKVV A ++  R  G  RG G V   + +++D AI   DG     R + V
Sbjct: 152 LTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQYDGAFFMDRKIFV 207



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>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDT---GRSRGFGFVTMASQEELDDAIAALDGQSLEGR 269
           +S+L   F  +G +    +VY++ +   G+ RG+ F+    + ++  A    DG+ ++GR
Sbjct: 116 ESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 175

Query: 268 ALRVNV 251
            + V+V
Sbjct: 176 RVLVDV 181



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>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRV 257
           +LFS++G++ +  +  +  TG+ +GF  V     E    A  A DG+  +GR L +
Sbjct: 319 QLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQDGKIFQGRLLHI 374



 Score = 33.9 bits (76), Expect = 0.19
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -3

Query: 424 ELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           +LF   G +   RV   +    SRGF F    S +E + A++AL G  L GR L +  A+
Sbjct: 721 KLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAMSALQGTHLLGRRLVLQYAQ 779



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -3

Query: 358 SRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVA 248
           S GFGFV  +S+E  + A  A+DG  L+G  L++ ++
Sbjct: 650 SMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKIS 686



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>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 475

 Score = 36.2 bits (82), Expect = 0.038
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           ++D ++ EL +  G +    +V D  TG S+G+ F         D AIA L+G  L  + 
Sbjct: 270 LNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKK 329

Query: 265 LRVNVA 248
           L V  A
Sbjct: 330 LLVQRA 335



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>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (hU2AF(65))
          Length = 475

 Score = 36.2 bits (82), Expect = 0.038
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           ++D ++ EL +  G +    +V D  TG S+G+ F         D AIA L+G  L  + 
Sbjct: 270 LNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKK 329

Query: 265 LRVNVA 248
           L V  A
Sbjct: 330 LLVQRA 335



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>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)|
           (PPIase cyp6) (Rotamase cyp8)
          Length = 432

 Score = 36.2 bits (82), Expect = 0.038
 Identities = 15/65 (23%), Positives = 35/65 (53%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALR 260
           D  L  +FS  GK++  +V+ D++TG S  + F+   ++E ++ A   +    ++   + 
Sbjct: 257 DEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSRIH 316

Query: 259 VNVAE 245
           V+ ++
Sbjct: 317 VDFSQ 321



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>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 266

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L ELF + G V+  ++  D+D G+ + F FV    +  +  A+  L+G  L GR 
Sbjct: 21  VTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRP 79

Query: 265 LRV 257
           +++
Sbjct: 80  IKI 82



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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 17/64 (26%), Positives = 37/64 (57%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V   ++ + F + G++    ++YDR+TG  +G+G++   S    + A+  L+G  L+G+ 
Sbjct: 75  VTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-QLNGGELKGKK 133

Query: 265 LRVN 254
           + V+
Sbjct: 134 IAVS 137



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>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 595

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLE-GRAL 263
           +  L+ L  + GK+ + R++ D + G +RG+ FVT ++++E  +AI  L+   +  GR L
Sbjct: 69  EDELIPLCEKIGKIYEMRLMMDFN-GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRTGRLL 127

Query: 262 RV 257
            V
Sbjct: 128 GV 129



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>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export|
           factor-binding protein 1) (REF1-I) (Ally of AML-1 and
           LEF-1) (Aly/REF)
          Length = 254

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V D+ + ELF+E G +  A V YDR +GRS G   V    + +   A+   +G  L+GR 
Sbjct: 115 VSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 173

Query: 265 LRVNV 251
           + + +
Sbjct: 174 MNIQL 178



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>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)|
           (Transcriptional coactivator Aly/REF) (bZIP-enhancing
           factor BEF)
          Length = 256

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 22/65 (33%), Positives = 35/65 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V D+ + ELF+E G +  A V YDR +GRS G   V    + +   A+   +G  L+GR 
Sbjct: 116 VSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRP 174

Query: 265 LRVNV 251
           + + +
Sbjct: 175 MNIQL 179



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>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 594

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -3

Query: 439 DSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSL-EGRAL 263
           +  L+ L  + GK+ + R++ D + G +RG+ FVT ++++E  +AI  L+   +  GR L
Sbjct: 69  EDELIPLCEKIGKIYEMRMMMDFN-GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127

Query: 262 RV 257
            V
Sbjct: 128 GV 129



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>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein
           homolog)
          Length = 247

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -3

Query: 388 RVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           R+V D+DT + +GF +V     + L +A+   DG  L  R+LRV++AE
Sbjct: 70  RLVRDKDTDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLRVDIAE 116



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>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)|
           (Williams-Beuren syndrome chromosome region 1 protein)
          Length = 247

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -3

Query: 388 RVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRALRVNVAE 245
           R+V D+DT + +GF +V     + L +A+   DG  L  R+LRV++AE
Sbjct: 70  RLVRDKDTDKFKGFCYVEFDEVDSLKEAL-TYDGALLGDRSLRVDIAE 116



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>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor|
           50 kDa subunit) (U2 snRNP auxiliary factor large
           subunit)
          Length = 416

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           ++D ++ EL    GK+    +V D  TG S+G+ F         D +IA L+G  L  + 
Sbjct: 218 LNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAFCEYVDLSITDQSIAGLNGMQLGDKK 277

Query: 265 LRVNVA 248
           L V  A
Sbjct: 278 LIVQRA 283



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>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 262

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V +  L ELF + G V+  ++  D+D G+ + F FV    +  +  A+  L+G  L GR 
Sbjct: 21  VTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLLNGIKLFGRP 79

Query: 265 LRV 257
           +++
Sbjct: 80  IKI 82



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>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 403

 Score = 35.4 bits (80), Expect = 0.065
 Identities = 18/68 (26%), Positives = 33/68 (48%)
 Frame = -3

Query: 445 VDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQEELDDAIAALDGQSLEGRA 266
           V D  L + F   G +V  R+    D+G+ +GF F+   ++E   + +     + + GR 
Sbjct: 250 VTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSCRKIAGRP 309

Query: 265 LRVNVAEE 242
           LR+   E+
Sbjct: 310 LRMEYGED 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,948,408
Number of Sequences: 219361
Number of extensions: 1311381
Number of successful extensions: 5051
Number of sequences better than 10.0: 340
Number of HSP's better than 10.0 without gapping: 4642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5025
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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