ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31... 835 0.0
2emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMW... 507 e-141
3dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds 404 e-110
4dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
5dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 4e-35
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
7dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
8dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
9gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) 137 3e-29
10gb|AY111861.1| Zea mays CL2457_1 mRNA sequence 129 8e-27
11emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein 111 2e-21
12gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence 107 3e-20
13gb|AY108263.1| Zea mays PCO100700 mRNA sequence 105 1e-19
14ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING ... 54 4e-04
15emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T) 54 4e-04
16gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, co... 54 4e-04
17emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein 54 4e-04
18gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 ... 54 4e-04
19dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast ... 54 4e-04
20emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA bindin... 54 4e-04
21gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding pr... 54 4e-04
22emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31... 52 0.002
23emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding prot... 50 0.006
24gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map... 46 0.097
25dbj|AP006466.1| Balaenoptera bonaerensis mitochondrial DNA, comp... 46 0.097
26ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 44 0.39
27gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, comple... 44 0.39
28ref|XM_801979.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
29gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome... 42 1.5
30ref|XM_806442.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.5
31emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 42 1.5
32gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, co... 42 1.5
33gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 42 1.5
34gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complet... 42 1.5
35gb|AC141633.4| Mus musculus BAC clone RP24-155I4 from chromosome... 42 1.5
36emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 i... 42 1.5
37gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, comp... 42 1.5
38gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Canc... 42 1.5
39emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chr... 42 1.5
40gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, co... 40 6.0
41gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, co... 40 6.0
42gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, com... 40 6.0
43gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.0
44gb|AC132871.7| Mus musculus chromosome 1, clone RP24-387A12, com... 40 6.0
45gb|AC107671.7| Mus musculus chromosome 7, clone RP23-112C18, com... 40 6.0
46gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, co... 40 6.0
47gb|AC122265.4| Mus musculus chromosome 8 clone RP23-197I18, comp... 40 6.0
48emb|CR936975.9| Zebrafish DNA sequence from clone CH211-195B15 i... 40 6.0
49gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome... 40 6.0
50gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete... 40 6.0
51gb|AC154766.2| Mus musculus BAC clone RP24-440G8 from chromosome... 40 6.0
52emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chr... 40 6.0
53emb|AL158823.11| Human DNA sequence from clone RP11-151F5 on chr... 40 6.0
54emb|AL031257.1|HS796I11 Human DNA sequence from clone RP4-796I11... 40 6.0
55gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 ma... 40 6.0
56gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, comple... 40 6.0
57emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 40 6.0
58emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, B... 40 6.0
59emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 40 6.0
60emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chr... 40 6.0
61emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 ... 40 6.0
62dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete s... 40 6.0
63dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHa... 40 6.0
64ref|XM_680992.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.0
65gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.0
66gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cance... 40 6.0
67dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
68dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
69emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Co... 40 6.0
70gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, comple... 40 6.0
71gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, comp... 40 6.0
72dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
73dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast ... 40 6.0
74ref|NM_211458.1| Eremothecium gossypii AGL271Wp (AGL271W), mRNA 40 6.0
75emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-3... 40 6.0
76gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
77gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.10... 40 6.0
78emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
79emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
80gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 6.0
81emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chr... 40 6.0
82emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, c... 40 6.0
83dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.0
84emb|AL137012.6| Human DNA sequence from clone RP1-80G16 on chrom... 40 6.0
85emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 6.0
86gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-bindin... 40 6.0
87emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chr... 40 6.0 
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein
          Length = 1318

 Score =  835 bits (421), Expect = 0.0
 Identities = 442/448 (98%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atatgcgtagtatgtn-gacaaaacttttgaattgcatcgacagattgtgaacatggaag 59
            ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 atatgcgtattatgtcagacaaaacttttgaattgcatcgacagattgtgaacatggaag 1207

                                                                        
Query: 60   caacaggcagatagcaaaagagaaaaacaaggagagagaggagacatgcatggcacaagg 119
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1206 caacaggcagatagcaaaagagaaaaacaaggagagagaggagacttgcatggcacaagg 1147

                                                                        
Query: 120  atggatgggaggatgatgatgggatctaagccggtatcgggcgtgctatcgtgtctctta 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 atggatgggaggatgatgatgggatctaagccggtatcgggcgtgctatcgtgtctctta 1087

                                                                        
Query: 180  cgcagcaatcttgtcgtagtgcaccgccaaatataccttcattagaacctcctcggtggc 239
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 cgcagcaatcttgtcgtattgcaccgccaaatataccttcattagaacctcctcggtggc 1027

                                                                        
Query: 240  cgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatcgagggca 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 cgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatcgagggca 967

                                                                        
Query: 300  gcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcctcgtgag 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  gcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcctcgtgag 907

                                                                        
Query: 360  cgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctcgctgaac 419
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 906  cgcccagtgtctctgtcgtagacgaccttggcatcgaccactttgccatgctcgctgaac 847

                                        
Query: 420  agctccaccaacctagagtcgtccactt 447
            ||||||||||||||||||||||||||||
Sbjct: 846  agctccaccaacctagagtcgtccactt 819
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>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781
          Length = 350

 Score =  507 bits (256), Expect = e-141
 Identities = 272/276 (98%), Gaps = 1/276 (0%)
 Strand = Plus / Plus

                                                                       
Query: 172 gtctcttacgcagcaatcttgtcgtagtgcaccgccaaatataccttcattagaacctcc 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   gtctcttacgcagcaatcttgtcgtagtgcaccgccaaatataccttcattagaacctcc 67

                                                                       
Query: 232 tcggtggccgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccat 291
           |||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 68  tcggtggccgcgtctccgcgacgttgacccttagggcacgccc-tccaagctctgtccat 126

                                                                       
Query: 292 cgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagc 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagc 186

                                                                       
Query: 352 ctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgct 411
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctcgtgggcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgct 246

                                               
Query: 412 cgctgaacagctccaccaacctagagtcgtccactt 447
           ||||||||||||||||||||||||||||||||||||
Sbjct: 247 cgctgaacagctccaccaacctagagtcgtccactt 282
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>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds
          Length = 1161

 Score =  404 bits (204), Expect = e-110
 Identities = 279/304 (91%)
 Strand = Plus / Minus

                                                                       
Query: 144 tctaagccggtatcgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtagtgcac 203
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 997 tctaagccggtattgggcgtgctatcgtgtctcttacgcagcaatcttgtcgtagtccac 938

                                                                       
Query: 204 cgccaaatataccttcattagaacctcctcggtggccgctcctccgcgacgttgaccctt 263
           |  |||||| ||||||||||||||||||  ||||||||||||||||| ||||| ||||  
Sbjct: 937 catcaaatacaccttcattagaacctccgtggtggccgctcctccgcaacgttcacccgc 878

                                                                       
Query: 264 agggcacgcccctccaagctctgtccatcgagggcagcgatggcgtcatccagttcctcc 323
           || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||  |
Sbjct: 877 agagcacgcccctccaagctctgtccatcgagggcagcgatggcatcatcaagttccggc 818

                                                                       
Query: 324 tgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacg 383
           || || ||||||||||||||||| || || ||||||||||||||||||||||||||||| 
Sbjct: 817 tgtgatgccattgtcacgaaaccaaatccccgtgagcgcccagtgtctctgtcgtagaca 758

                                                                       
Query: 384 accctggcatcgaccactttgccatgctcgctgaacagctccaccaacctagagtcgtcc 443
           |||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 757 accctggcatcgacaactttgccgtgctcgctgaacagctctaccaacctagagtcgtcc 698

               
Query: 444 actt 447
           ||||
Sbjct: 697 actt 694



 Score =  161 bits (81), Expect = 2e-36
 Identities = 106/113 (93%), Gaps = 1/113 (0%)
 Strand = Plus / Minus

                                                                        
Query: 17   gacaaaacttttgaattgcatcgacagattgtgaacatggaagcaacaggcagatagcaa 76
            ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 1113 gacaaaacttttgaattgcatcgacagattgagaacgtggaagcaacaggcagatagcaa 1054

                                                                 
Query: 77   aagagaaaaaca-aggagagagaggagacatgcatggcacaaggatggatggg 128
            ||||||||||||  ||||||||||||| ||  |||||||||||||||||||||
Sbjct: 1053 aagagaaaaacactggagagagaggaggcagacatggcacaaggatggatggg 1001
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>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full
           insert sequence
          Length = 1196

 Score =  157 bits (79), Expect = 4e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                       
Query: 233 cggtggccgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatc 292
           |||||| |||||||| || || || || || || ||||| || ||||| |||||||||||
Sbjct: 980 cggtggtcgctcctctgcaacattcactctcagcgcacggccatccaaactctgtccatc 921

                                                                       
Query: 293 gagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcc 352
           |||||| || || ||||| |||| ||| ||||| | ||||||||| || ||||| || ||
Sbjct: 920 gagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaaaccaaatcc 861

                                                                       
Query: 353 tcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctc 412
           |||||| |||||||| |||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 860 tcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactactttgccatgctc 801

                                              
Query: 413 gctgaacagctccaccaacctagagtcgtccactt 447
           |||||||||||  |||||||||||||| |||||||
Sbjct: 800 gctgaacagctgtaccaacctagagtcatccactt 766
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>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full
           insert sequence
          Length = 1289

 Score =  157 bits (79), Expect = 4e-35
 Identities = 181/215 (84%)
 Strand = Plus / Minus

                                                                       
Query: 233 cggtggccgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatc 292
           |||||| |||||||| || || || || || || ||||| || ||||| |||||||||||
Sbjct: 981 cggtggtcgctcctctgcaacattcactctcagcgcacggccatccaaactctgtccatc 922

                                                                       
Query: 293 gagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcc 352
           |||||| || || ||||| |||| ||| ||||| | ||||||||| || ||||| || ||
Sbjct: 921 gagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaaaccaaatcc 862

                                                                       
Query: 353 tcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctc 412
           |||||| |||||||| |||||||| || || || ||||| ||||| ||||||||||||||
Sbjct: 861 tcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactactttgccatgctc 802

                                              
Query: 413 gctgaacagctccaccaacctagagtcgtccactt 447
           |||||||||||  |||||||||||||| |||||||
Sbjct: 801 gctgaacagctgtaccaacctagagtcatccactt 767
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  143 bits (72), Expect = 6e-31
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                            
Query: 284      ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 343
                ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 22204205 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 22204264

                                                                            
Query: 344      accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 403
                ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 22204265 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 22204324

                                                            
Query: 404      gccatgctcgctgaacagctccaccaacctagagtcgtccactt 447
                ||||||||||||||||||||  |||||||||||||| |||||||
Sbjct: 22204325 gccatgctcgctgaacagctgtaccaacctagagtcatccactt 22204368
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>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score =  143 bits (72), Expect = 6e-31
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                         
Query: 284   ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 343
             ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 24103 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 24162

                                                                         
Query: 344   accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 403
             ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 24163 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 24222

                                                         
Query: 404   gccatgctcgctgaacagctccaccaacctagagtcgtccactt 447
             ||||||||||||||||||||  |||||||||||||| |||||||
Sbjct: 24223 gccatgctcgctgaacagctgtaccaacctagagtcatccactt 24266
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>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0042B15
          Length = 157981

 Score =  143 bits (72), Expect = 6e-31
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                          
Query: 284    ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 343
              ||||||||||||||| || || ||||| |||| ||| ||||| | ||||||||| || ||
Sbjct: 125698 ctgtccatcgagggctgcaatagcgtcgtccaattcttcctgtgtcgccattgttacaaa 125757

                                                                          
Query: 344    accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 403
              ||| || |||||||| |||||||| |||||||| || || || ||||| ||||| |||||
Sbjct: 125758 accaaatcctcgtgaacgcccagtttctctgtcatacacaactctggcgtcgactacttt 125817

                                                          
Query: 404    gccatgctcgctgaacagctccaccaacctagagtcgtccactt 447
              ||||||||||||||||||||  |||||||||||||| |||||||
Sbjct: 125818 gccatgctcgctgaacagctgtaccaacctagagtcatccactt 125861
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>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP)
          Length = 1251

 Score =  137 bits (69), Expect = 3e-29
 Identities = 177/213 (83%)
 Strand = Plus / Minus

                                                                        
Query: 235  gtggccgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatcga 294
            ||||||||||||| || || || ||||  | |||||| || ||||| ||||||||||| |
Sbjct: 1021 gtggccgctcctctgcaacattcacccgcaaggcacggccatccaaactctgtccatcaa 962

                                                                        
Query: 295  gggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcctc 354
            ||||||| || || ||||||| ||| |||||||| ||||| || || ||||| || || |
Sbjct: 961  gggcagcaatagcatcatccaattcgtcctgcgatgccatagtaacaaaaccaaatcccc 902

                                                                        
Query: 355  gtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctcgc 414
            |||| |||||||| |||| ||| ||||| || |||||||| || ||||| ||||||||||
Sbjct: 901  gtgaacgcccagtttctcggtcatagacaactctggcatcaactactttaccatgctcgc 842

                                             
Query: 415  tgaacagctccaccaacctagagtcgtccactt 447
            |||||| ||||||||| ||||| || |||||||
Sbjct: 841  tgaacaactccaccaatctagaatcatccactt 809
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>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence
          Length = 1273

 Score =  129 bits (65), Expect = 8e-27
 Identities = 176/213 (82%)
 Strand = Plus / Minus

                                                                        
Query: 235  gtggccgctcctccgcgacgttgacccttagggcacgcccctccaagctctgtccatcga 294
            ||||||||||||| || || || ||||  | |||||| || ||||| ||||||||||| |
Sbjct: 1021 gtggccgctcctctgcaacattcacccgcaaggcacggccatccaaactctgtccatcaa 962

                                                                        
Query: 295  gggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaaaccgaagcctc 354
            ||||||| || || ||||||| ||| |||||||| ||||| || || ||||| || || |
Sbjct: 961  gggcagcaatagcatcatccaattcgtcctgcgatgccatagtaacaaaaccaaatcccc 902

                                                                        
Query: 355  gtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccactttgccatgctcgc 414
            | || |||||||| |||| ||| ||||| || |||||||| || ||||| ||||||||||
Sbjct: 901  gcgaacgcccagtttctcggtcatagacaactctggcatcaactactttaccatgctcgc 842

                                             
Query: 415  tgaacagctccaccaacctagagtcgtccactt 447
            |||||| ||||||||| ||||| || |||||||
Sbjct: 841  tgaacaactccaccaatctagaatcatccactt 809
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>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein
          Length = 3176

 Score =  111 bits (56), Expect = 2e-21
 Identities = 137/164 (83%)
 Strand = Plus / Minus

                                                                        
Query: 284  ctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacgaa 343
            ||||||||| |||||||| || || ||||||| ||| |||||||| ||||| || || ||
Sbjct: 2461 ctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagtaacaaa 2402

                                                                        
Query: 344  accgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccacttt 403
            ||| || || || || |||||||| |||| ||| ||||| || |||||||| || |||||
Sbjct: 2401 accaaatccccgcgaacgcccagtttctcggtcatagacaactctggcatcaactacttt 2342

                                                        
Query: 404  gccatgctcgctgaacagctccaccaacctagagtcgtccactt 447
             |||||||||||||||| ||||||||| ||||| || |||||||
Sbjct: 2341 accatgctcgctgaacaactccaccaatctagaatcatccactt 2298
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>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence
          Length = 1108

 Score =  107 bits (54), Expect = 3e-20
 Identities = 138/166 (83%)
 Strand = Plus / Plus

                                                                       
Query: 282 ctctgtccatcgagggcagcgatggcgtcatccagttcctcctgcgacgccattgtcacg 341
           ||||||||||| |||||||| || || ||||||| ||| |||||||| ||||| || || 
Sbjct: 244 ctctgtccatcaagggcagcaatagcatcatccaattcgtcctgcgatgccatagtaaca 303

                                                                       
Query: 342 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccact 401
           ||||| || || ||||| | |||||| |||| ||| ||||| || |||||||| || |||
Sbjct: 304 aaaccaaatccccgtgaacccccagtttctccgtcatagacaactctggcatcaactact 363

                                                         
Query: 402 ttgccatgctcgctgaacagctccaccaacctagagtcgtccactt 447
           || |||||||||||||||| | ||||||| ||||| || |||||||
Sbjct: 364 ttaccatgctcgctgaacaaccccaccaatctagaatcatccactt 409
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>gb|AY108263.1| Zea mays PCO100700 mRNA sequence
          Length = 891

 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Minus

                                                                       
Query: 315 agttcctcctgcgacgccattgtcacgaaaccgaagcctcgtgagcgcccagtgtctctg 374
           ||||||||||  ||| ||||||  || |||||||| ||||||||||||||||| ||||||
Sbjct: 517 agttcctcctttgacaccattgatacaaaaccgaatcctcgtgagcgcccagtttctctg 458

                                                                       
Query: 375 tcgtagacgaccctggcatcgaccactttgccatgctcgctgaacagctccaccaaccta 434
           |||||||| ||| | ||||| || ||||  |||||||||||||||| || ||||| ||||
Sbjct: 457 tcgtagacaaccttagcatcaacaacttctccatgctcgctgaacaactgcaccagccta 398

                
Query: 435 gagtc 439
           |||||
Sbjct: 397 gagtc 393
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>ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding
            AT4G24770 (RBP31) mRNA, complete cds
          Length = 1254

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 273  ccctccaagctctgtccatcgagggcagcgatggc 307
            ||||||||| |||||||||||||||||| ||||||
Sbjct: 1006 ccctccaagttctgtccatcgagggcagagatggc 972
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>emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T)
          Length = 1148

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 986 ccctccaagttctgtccatcgagggcagagatggc 952
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>gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, complete cds
          Length = 990

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 935 ccctccaagttctgtccatcgagggcagagatggc 901
to top
>emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein
          Length = 1090

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 878 ccctccaagttctgtccatcgagggcagagatggc 844
to top
>gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 mRNA, complete cds
          Length = 1171

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 991 ccctccaagttctgtccatcgagggcagagatggc 957
to top
>dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp31,
           partial cds
          Length = 1035

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 860 ccctccaagttctgtccatcgagggcagagatggc 826
to top
>emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA binding protein homologous to
           nucleolin
          Length = 872

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 695 ccctccaagttctgtccatcgagggcagagatggc 661
to top
>gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding protein (rbp31) mRNA,
           complete cds
          Length = 1179

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 273 ccctccaagctctgtccatcgagggcagcgatggc 307
           ||||||||| |||||||||||||||||| ||||||
Sbjct: 974 ccctccaagttctgtccatcgagggcagagatggc 940
to top
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein
          Length = 1139

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 342 aaaccgaagcctcgtgagcgcccagtgtctctgtcgtagacgaccctggcatcgaccact 401
           ||||| || ||||| || |||||||| |||||||| || |||| | | ||||  || |||
Sbjct: 794 aaaccaaatcctcgcgaacgcccagtttctctgtcatacacgatcgtagcattaactact 735

                                                 
Query: 402 ttgccatgctcgctgaacagctccaccaacctagagtc 439
           |  ||||||||||||||||  | |||||||||||||||
Sbjct: 734 tccccatgctcgctgaacatttgcaccaacctagagtc 697
to top
>emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding protein, involved in plastid
           mRNA 3' processing
          Length = 1009

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 276 tccaagctctgtccatcgagggcagcgatggcgtcat 312
           |||||| ||||||||||||| ||||| ||||||||||
Sbjct: 626 tccaaggtctgtccatcgagagcagcaatggcgtcat 590
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>gb|AC004561.3| Arabidopsis thaliana chromosome 2 clone F16P2 map ve014, complete
              sequence
          Length = 131743

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 18     acaaaacttttgaattgcatcga 40
              |||||||||||||||||||||||
Sbjct: 101487 acaaaacttttgaattgcatcga 101509
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>dbj|AP006466.1| Balaenoptera bonaerensis mitochondrial DNA, complete genome
          Length = 16421

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 117  aggatggatgggaggatgatgat 139
            |||||||||||||||||||||||
Sbjct: 8066 aggatggatgggaggatgatgat 8044
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>ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03841.1)
           partial mRNA
          Length = 3492

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 339 acgaaaccgaagcctcgtgagcgcccagtgtctc 372
           |||||||||||||||| |||||| ||||| ||||
Sbjct: 146 acgaaaccgaagcctcttgagcgaccagtatctc 113
to top
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds
          Length = 1217

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 273 ccctccaagctctgtccatcgagggc 298
           ||||||||||||| ||||||||||||
Sbjct: 918 ccctccaagctctctccatcgagggc 893
to top
>ref|XM_801979.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506509.50) partial mRNA
          Length = 2241

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  agaaaaacaaggagagagagg 100
           |||||||||||||||||||||
Sbjct: 644 agaaaaacaaggagagagagg 664
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>gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome 18, complete sequence
          Length = 222376

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     atagcaaaagagaaaaacaag 90
              |||||||||||||||||||||
Sbjct: 199702 atagcaaaagagaaaaacaag 199682
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>ref|XM_806442.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506579.90) partial mRNA
          Length = 2541

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  agaaaaacaaggagagagagg 100
           |||||||||||||||||||||
Sbjct: 956 agaaaaacaaggagagagagg 976
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 409   gctcgctgaacagctccacca 429
             |||||||||||||||||||||
Sbjct: 24117 gctcgctgaacagctccacca 24097
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>gb|AC027281.10| Homo sapiens chromosome 16 clone RP11-424M24, complete sequence
          Length = 221210

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 118   ggatggatgggaggatgatgatggg 142
             ||||||||||| |||||||||||||
Sbjct: 99755 ggatggatgggtggatgatgatggg 99731
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 67    cagatagcaaaagagaaaaacaagg 91
             |||||||||||||| ||||||||||
Sbjct: 83143 cagatagcaaaagacaaaaacaagg 83119
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>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence
          Length = 165373

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     agcaaaagagaaaaacaagga 92
              |||||||||||||||||||||
Sbjct: 142477 agcaaaagagaaaaacaagga 142497
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>gb|AC141633.4| Mus musculus BAC clone RP24-155I4 from chromosome 18, complete sequence
          Length = 163886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     atagcaaaagagaaaaacaag 90
              |||||||||||||||||||||
Sbjct: 152908 atagcaaaagagaaaaacaag 152928
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>emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 in linkage group 9,
              complete sequence
          Length = 156348

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 79     gagaaaaacaaggagagagaggaga 103
              |||||||||||||||||||| ||||
Sbjct: 137950 gagaaaaacaaggagagagacgaga 137974
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>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence
          Length = 225977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 117   aggatggatgggaggatgatg 137
             |||||||||||||||||||||
Sbjct: 44404 aggatggatgggaggatgatg 44424
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>gb|AC153492.5| Mus musculus 10 BAC RP23-292N5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195237

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    aaaagagaaaaacaaggagagagag 99
             |||||| ||||||||||||||||||
Sbjct: 43617 aaaagaaaaaaacaaggagagagag 43593
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>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   ggatggatgggaggatgatga 138
             |||||||||||||||||||||
Sbjct: 10393 ggatggatgggaggatgatga 10413
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>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     acaaggagagagaggagaca 105
              ||||||||||||||||||||
Sbjct: 101080 acaaggagagagaggagaca 101099
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>gb|AC161528.14| Mus musculus chromosome 8, clone RP23-369H18, complete sequence
          Length = 206302

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     acaaggagagagaggagaca 105
              ||||||||||||||||||||
Sbjct: 184158 acaaggagagagaggagaca 184139
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>gb|AC100180.12| Mus musculus chromosome 1, clone RP23-53J14, complete sequence
          Length = 188055

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 82   aaaaacaaggagagagaggagaca 105
            ||||| ||||||||||||||||||
Sbjct: 1314 aaaaaaaaggagagagaggagaca 1337
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    cgagggcagcgatggcgtca 311
              ||||||||||||||||||||
Sbjct: 693529 cgagggcagcgatggcgtca 693548
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>gb|AC132871.7| Mus musculus chromosome 1, clone RP24-387A12, complete sequence
          Length = 188649

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 82     aaaaacaaggagagagaggagaca 105
              ||||| ||||||||||||||||||
Sbjct: 181128 aaaaaaaaggagagagaggagaca 181151
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>gb|AC107671.7| Mus musculus chromosome 7, clone RP23-112C18, complete sequence
          Length = 202894

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     aaagagaaaaacaaggagagagag 99
              |||||||||||||| |||||||||
Sbjct: 160417 aaagagaaaaacaaagagagagag 160440
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>gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, complete sequence
          Length = 178435

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 80     agaaaaacaaggagagagaggaga 103
              ||||||| ||||||||||||||||
Sbjct: 158624 agaaaaaaaaggagagagaggaga 158647
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>gb|AC122265.4| Mus musculus chromosome 8 clone RP23-197I18, complete sequence
          Length = 191473

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    agagaaaaacaaggagagagagga 101
             ||||||||||||| ||||||||||
Sbjct: 87822 agagaaaaacaagaagagagagga 87799
to top
>emb|CR936975.9| Zebrafish DNA sequence from clone CH211-195B15 in linkage group 3,
             complete sequence
          Length = 121737

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aaagagaaaaacaaggagagagag 99
             |||||||||||||| |||||||||
Sbjct: 30481 aaagagaaaaacaacgagagagag 30458
to top
>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence
          Length = 220013

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 82     aaaaacaaggagagagaggagaca 105
              |||||||| |||||||||||||||
Sbjct: 212269 aaaaacaaagagagagaggagaca 212246
to top
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   gagcgcccagtgtctctgtc 376
             ||||||||||||||||||||
Sbjct: 49009 gagcgcccagtgtctctgtc 49028
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>gb|AC154766.2| Mus musculus BAC clone RP24-440G8 from chromosome 17, complete sequence
          Length = 166224

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    aaaaacaaggagagagaggagaca 105
             |||||||| |||||||||||||||
Sbjct: 41877 aaaaacaaagagagagaggagaca 41854
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>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete
            sequence
          Length = 162700

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 76   aaagagaaaaacaaggagagagag 99
            ||||||||| ||||||||||||||
Sbjct: 4175 aaagagaaacacaaggagagagag 4152
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>emb|AL158823.11| Human DNA sequence from clone RP11-151F5 on chromosome 9 Contains part
             of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor
             protein 2 (paralemmin 2), a ribosomal protein L21 (RPL21)
             pseudogene and a CpG island, complete sequence
          Length = 175558

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gagagagaggagacatgcat 110
             ||||||||||||||||||||
Sbjct: 85315 gagagagaggagacatgcat 85334
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>emb|AL031257.1|HS796I11 Human DNA sequence from clone RP4-796I11 on chromosome 20q12 Contains
             the 5' end of the TIX1 gene for triple homeobox 1 and a
             CpG island, complete sequence
          Length = 77402

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   ccaagctctgtccatcgagg 296
             ||||||||||||||||||||
Sbjct: 50321 ccaagctctgtccatcgagg 50340
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>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence
          Length = 180338

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gaggagacatgcatggcaca 116
              ||||||||||||||||||||
Sbjct: 147897 gaggagacatgcatggcaca 147878
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>gb|AC113615.3| Homo sapiens BAC clone RP11-586D19 from 4, complete sequence
          Length = 164043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  aaggatggatgggaggatga 135
            ||||||||||||||||||||
Sbjct: 3937 aaggatggatgggaggatga 3956
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>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 284   ctgtccatcgagggcagcgatggc 307
             ||||||||||||||||| ||||||
Sbjct: 40692 ctgtccatcgagggcagagatggc 40715
to top
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22K18 (ESSAII
             project)
          Length = 125803

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 284   ctgtccatcgagggcagcgatggc 307
             ||||||||||||||||| ||||||
Sbjct: 14816 ctgtccatcgagggcagagatggc 14793
to top
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 284   ctgtccatcgagggcagcgatggc 307
             ||||||||||||||||| ||||||
Sbjct: 11268 ctgtccatcgagggcagagatggc 11291
to top
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains
            part of the Ptprd gene for receptor type protein tyrosine
            phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  gagcgcccagtgtctctgtc 376
            ||||||||||||||||||||
Sbjct: 6399 gagcgcccagtgtctctgtc 6418
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>emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 in linkage group 19,
             complete sequence
          Length = 169614

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    atagcaaaagagaaaaacaa 89
             ||||||||||||||||||||
Sbjct: 70461 atagcaaaagagaaaaacaa 70480
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>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence
          Length = 67066

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ctggcatcgaccactttgcc 406
             ||||||||||||||||||||
Sbjct: 13867 ctggcatcgaccactttgcc 13848
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>dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHad2 (carrying TnHad1)
             genes, complete cds
          Length = 15604

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ctggcatcgaccactttgcc 406
             ||||||||||||||||||||
Sbjct: 12966 ctggcatcgaccactttgcc 12947
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>ref|XM_680992.1| PREDICTED: Danio rerio hypothetical protein LOC557848 (LOC557848),
            mRNA
          Length = 2963

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 76   aaagagaaaaacaaggagagagag 99
            |||||||||||||| |||||||||
Sbjct: 1573 aaagagaaaaacaacgagagagag 1596
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    gtggccgctcctccgcgacg 254
              ||||||||||||||||||||
Sbjct: 199457 gtggccgctcctccgcgacg 199476
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>gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162118

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    aagagaaaaacaaggagaga 96
             ||||||||||||||||||||
Sbjct: 82273 aagagaaaaacaaggagaga 82254
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       agaaaaacaaggagagagag 99
                ||||||||||||||||||||
Sbjct: 19391554 agaaaaacaaggagagagag 19391573
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       acaaggagagagaggagaca 105
                ||||||||||||||||||||
Sbjct: 12990521 acaaggagagagaggagaca 12990540
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>emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB77ZD03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 273  ccctccaagctctgtccatcgagggcag 300
            |||||||||  |||||||||||||||||
Sbjct: 1010 ccctccaagtactgtccatcgagggcag 983
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>gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, complete sequence
          Length = 186961

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aaacaaggagagagaggaga 103
              ||||||||||||||||||||
Sbjct: 154988 aaacaaggagagagaggaga 154969
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>gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, complete sequence
          Length = 152156

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ggatggatgggaggatgatg 137
             ||||||||||||||||||||
Sbjct: 34383 ggatggatgggaggatgatg 34402
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     acaaggagagagaggagaca 105
              ||||||||||||||||||||
Sbjct: 100164 acaaggagagagaggagaca 100183
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>dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31,
            complete cds (exon1, exon2, exon3, exon4)
          Length = 4135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  ctgtccatcgagggcagcgatggc 307
            ||||||||||||||||| ||||||
Sbjct: 2950 ctgtccatcgagggcagagatggc 2927
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>ref|NM_211458.1| Eremothecium gossypii AGL271Wp (AGL271W), mRNA
          Length = 3543

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  gtggccgctcctccgcgacg 254
            ||||||||||||||||||||
Sbjct: 1722 gtggccgctcctccgcgacg 1741
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>emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-362L22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187710

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    aaggagagagaggagacatg 107
             ||||||||||||||||||||
Sbjct: 10323 aaggagagagaggagacatg 10342
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 80       agaaaaacaaggagagagag 99
                ||||||||||||||||||||
Sbjct: 19317781 agaaaaacaaggagagagag 19317800
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>gb|AC005274.1|AC005274 Homo sapiens chromosome 17, clone hRPK.1090_M_7, complete sequence
          Length = 205150

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    gcagatagcaaaagagaaaa 85
             ||||||||||||||||||||
Sbjct: 52351 gcagatagcaaaagagaaaa 52332
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>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131975

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    agaaaaacaaggagagagag 99
             ||||||||||||||||||||
Sbjct: 97245 agaaaaacaaggagagagag 97264
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>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163490

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    agaaaaacaaggagagagag 99
             ||||||||||||||||||||
Sbjct: 69248 agaaaaacaaggagagagag 69267
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      gagaaaaacaaggagagaga 98
               ||||||||||||||||||||
Sbjct: 2654807 gagaaaaacaaggagagaga 2654788
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>emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chromosome 17, complete
             sequence
          Length = 192085

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 80    agaaaaacaaggagagagaggaga 103
             ||||||| ||||||||||||||||
Sbjct: 38549 agaaaaaaaaggagagagaggaga 38572
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>emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, complete sequence
          Length = 160432

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    atagcaaaagagaaaaacaa 89
             ||||||||||||||||||||
Sbjct: 61983 atagcaaaagagaaaaacaa 62002
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>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   gcatggcacaaggatggatg 126
             ||||||||||||||||||||
Sbjct: 35168 gcatggcacaaggatggatg 35149
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>emb|AL137012.6| Human DNA sequence from clone RP1-80G16 on chromosome 6. Contains a 60S
             ribosomal protein L21 (RPL21) pseudogene, ESTs, STSs, GSSs
             and a CpG island, complete sequence
          Length = 100948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gagagagaggagacatgcat 110
             ||||||||||||||||||||
Sbjct: 55843 gagagagaggagacatgcat 55862
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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   gaacagctccaccaacctag 435
             ||||||||||||||||||||
Sbjct: 29736 gaacagctccaccaacctag 29755
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>gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-binding proteins 1, 2, and 3
            gene, complete cds
          Length = 2716

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 284  ctgtccatcgagggcagcgatggc 307
            ||||||||||||||||| ||||||
Sbjct: 2130 ctgtccatcgagggcagagatggc 2107
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>emb|AL772336.5| Mouse DNA sequence from clone RP23-180H12 on chromosome 4, complete
              sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 78     agagaaaaacaaggagagagagga 101
              ||||||| ||||||||||||||||
Sbjct: 116025 agagaaagacaaggagagagagga 116048


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,654,003
Number of Sequences: 3902068
Number of extensions: 3654003
Number of successful extensions: 87793
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87395
Number of HSP's gapped (non-prelim): 396
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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