>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 951

 Score =  128 bits (322), Expect = 7e-30
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            LQA EPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT
Sbjct: 885  LQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 944

Query: 318  INQNYTV 298
            INQNYTV
Sbjct: 945  INQNYTV 951

>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)|
          Length = 952

 Score =  103 bits (256), Expect = 3e-22
 Identities = 54/68 (79%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
 Frame = -1

Query: 498  LQALEPASHT-LFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDID 322
            L  L+P   T LFN+K+SYRELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+
Sbjct: 885  LHGLQPPEATNLFNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIE 944

Query: 321  TINQNYTV 298
            TI Q+YTV
Sbjct: 945  TIQQHYTV 952

>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)|
          Length = 948

 Score =  102 bits (253), Expect = 7e-22
 Identities = 51/68 (75%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
 Frame = -1

Query: 498  LQALEPAS-HTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDID 322
            L  L+PA  + +FN+K+SY ELS+IAEQAKRRAE+ RLRE+NTLKGHVESVVKLKGLDID
Sbjct: 881  LHGLQPAEKNNIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDID 940

Query: 321  TINQNYTV 298
            TI Q+YTV
Sbjct: 941  TIQQHYTV 948

>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)|
          Length = 954

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 49/68 (72%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
 Frame = -1

Query: 498  LQALEPASHT-LFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDID 322
            L  L+PA  + +FNDKS+YRELSEIA+QAKRRAE+ARLRE +TLKGHVESVVK KGLDI+
Sbjct: 887  LHGLQPAQTSDMFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIE 946

Query: 321  TINQNYTV 298
             I Q+YT+
Sbjct: 947  AIQQHYTL 954

>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)|
          Length = 948

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 50/68 (73%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = -1

Query: 498  LQALEPASHT-LFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDID 322
            L  L+P     +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESV KLKGLDID
Sbjct: 881  LHGLQPKEDVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDID 940

Query: 321  TINQNYTV 298
            T   +YTV
Sbjct: 941  TAGHHYTV 948

>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)|
          Length = 949

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 47/67 (70%), Positives = 58/67 (86%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+P   ++F D ++Y ELSEIAEQAK+RAE+ARLRE++TLKGHVESVVKLKGLDID 
Sbjct: 884  LHGLKPPE-SMFEDTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDN 942

Query: 318  INQNYTV 298
            +NQ+YTV
Sbjct: 943  LNQHYTV 949

>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)|
          Length = 948

 Score = 92.4 bits (228), Expect = 6e-19
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 483  PASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNY 304
            P    +FND  +  ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+Y
Sbjct: 889  PPPEAMFNDNKN--ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHY 946

Query: 303  TV 298
            TV
Sbjct: 947  TV 948

>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 956

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 43/67 (64%), Positives = 57/67 (85%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+     +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 890  LHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 949

Query: 318  INQNYTV 298
            I Q+YTV
Sbjct: 950  IQQSYTV 956

>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = -1

Query: 498  LQALEPASHT-LFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDID 322
            L  L+P     +F +K SYRELSEIAEQAKRRAEIARLREL+TLKGHVESVVKLKGLDI+
Sbjct: 881  LHGLQPKEAVNIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIE 940

Query: 321  TINQNYTV 298
            T   +YTV
Sbjct: 941  T-PSHYTV 947

>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 957

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 44/67 (65%), Positives = 56/67 (83%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+     LF++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 891  LHGLQVPDTKLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 950

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 951  IQQAYTV 957

>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)|
          Length = 956

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 43/67 (64%), Positives = 56/67 (83%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+     +F++ +++ EL+++AE+AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T
Sbjct: 890  LHGLQVPDPKIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIET 949

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 950  IQQAYTV 956

>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            11)
          Length = 956

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+     +F +++ + ELS++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+T
Sbjct: 890  LHGLQAPDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIET 949

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 950  IQQAYTV 956

>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
           (Fragment)
          Length = 704

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/67 (64%), Positives = 56/67 (83%)
 Frame = -1

Query: 498 LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
           L  L+     LF++ +++ EL+++AE+AKRRAEIAR REL+TLKGHVESVVKLKGLDI+T
Sbjct: 638 LHGLQVPDIKLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIET 697

Query: 318 INQNYTV 298
           I Q+YTV
Sbjct: 698 IQQSYTV 704

>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)|
          Length = 960

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = -1

Query: 498  LQALEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDT 319
            L  L+     +F D++   EL+++AE+AKRRAEIARLREL+TLKGHVESVV+LKGLDI+T
Sbjct: 894  LHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIET 953

Query: 318  INQNYTV 298
            I Q YTV
Sbjct: 954  IQQAYTV 960

>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)|
          Length = 948

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = -1

Query: 459  DKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298
            ++  YRELSEIA QAKRRAEIARLREL+TLKGHVESVVKLKGLDI+T   +YTV
Sbjct: 896  ERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 948

>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)|
          Length = 961

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = -1

Query: 459  DKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIN-QNYTV 298
            +++S  EL+ +AE+AKRRAEIAR+REL TLKG VES  KLKG D++  N  NYT+
Sbjct: 907  ERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961

>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump|
            10)
          Length = 947

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 26/53 (49%), Positives = 36/53 (67%)
 Frame = -1

Query: 456  KSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 298
            + S    S IAEQ +RRAEIARL E++++  H+ESV+KLK +D   I   +TV
Sbjct: 895  RGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947

>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 36.6 bits (83), Expect = 0.038
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -1

Query: 498 LQALEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLKGHVESVVKLKGLD 328
           +Q  EPA   L  D    REL E   + K+R E     R REL  LKG ++  V  +  +
Sbjct: 449 VQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQE 508

Query: 327 IDTINQNY 304
           ++ + Q Y
Sbjct: 509 VEHVRQQY 516

>SMG_DROME (Q23972) Protein Smaug|
          Length = 999

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -3

Query: 313 PKLHRVRNLGIGPNNMTSVLERDWNG 236
           PK+H V+  G+GPNN  ++ +  WNG
Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793

>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)|
          Length = 1197

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -3

Query: 355  VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 230
            V GE QGP   H    L      R R  G+GP    +  E +WN AP
Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157

>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1
          Length = 2601

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -2

Query: 470  HSSTTRAATVSSLRSLSKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTPCEE 291
            HS + R+A   ++R+ S     +R    GS+ H  G  S   S R  +  PS+ +TP   
Sbjct: 1856 HSRSVRSAP--AMRAASAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAI 1913

Query: 290  FGHWTKQHD-IRIGAR 246
             G    Q D +R+ AR
Sbjct: 1914 RGLTRDQFDAVRVRAR 1929


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,117,504
Number of Sequences: 219361
Number of extensions: 1445306
Number of successful extensions: 3440
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3438
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)