ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61h16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK066777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
3dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
4dbj|AK068937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
5dbj|AK062125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
6gb|AC040926.5| Homo sapiens chromosome 8, clone RP11-776K3, comp... 42 2.1
7gb|L16622.1| Caenorhabditis elegans cosmid C02D5, complete sequence 42 2.1
8ref|NM_105370.1| Arabidopsis thaliana ATP binding / kinase/ prot... 40 8.3
9gb|AC095688.7| Rattus norvegicus 2 BAC CH230-9C20 (Children's Ho... 40 8.3
10gb|AF251497.1| Cloning vector HKBS1, complete sequence 40 8.3
11gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom... 40 8.3
12gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
13emb|AL133325.20| Human DNA sequence from clone RP5-984P4 on chro... 40 8.3
14emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chr... 40 8.3
15dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 8.3
16gb|DP000049.1| Dasypus novemcinctus target 126 genomic scaffold 40 8.3
17gb|CP000043.1| Bacillus cereus E33L plasmid pE33L8, complete seq... 40 8.3
18gb|M57416.1|XENLUXAB Photorhabdus luminescens LuxD (luxD) gene, ... 40 8.3
19gb|M90093.1|XENLABCDEA Photorhabdus luminescens fatty acid reduc... 40 8.3
20gb|M55977.1|XENLUXABB Photorhabdus luminescens LuxD (luxD) gene,... 40 8.3
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
22emb|BX890578.6| Mouse DNA sequence from clone RP23-72P20 on chro... 40 8.3
23gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosom... 40 8.3
24gb|AC109637.3| Homo sapiens BAC clone RP11-325A18 from 2, comple... 40 8.3
25gb|AC020547.7| Homo sapiens BAC clone RP11-134F3 from 2, complet... 40 8.3
26gb|AF241720.1| Penicillium sp. KCTC16087 small subunit ribosomal... 40 8.3
27gb|AY962893.1| Transcriptional fusion vector pUC18-mini-Tn7T-Gm-... 40 8.3
28gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se... 40 8.3
29gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1... 40 8.3
30emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chr... 40 8.3
31emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1... 40 8.3
32emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 i... 40 8.3
33gb|AE015927.1| Clostridium tetani E88, complete genome 40 8.3
34gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
35emb|AL672069.10| Mouse DNA sequence from clone RP23-343O22 on ch... 40 8.3

>dbj|AK066777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L23, full
            insert sequence
          Length = 2082

 Score =  194 bits (98), Expect = 2e-46
 Identities = 236/282 (83%)
 Strand = Plus / Minus

                                                                        
Query: 323  agttggctccacatggaaatttgggaaccgaagagccgcacactaactgatttcttggac 382
            ||||||||||| | ||||||||  ||||| ||||| ||||||   || ||||| || || 
Sbjct: 1530 agttggctccataaggaaattttagaaccaaagagtcgcacatggacagatttttttgat 1471

                                                                        
Query: 383  cctgtcctaacaaactccagctccctcgataccccatgttcttcaaagctggaatcttca 442
            |||  ||||||||| ||||||||||| ||||| |||| |||  || ||||||  ||||||
Sbjct: 1470 cctcccctaacaaattccagctcccttgatacaccattttcagcatagctgggttcttca 1411

                                                                        
Query: 443  agaaatgggaggtcaactgtaccctcagactccacattcttaagccatcctcggagcaaa 502
            |||||||| |   |||||| ||||||||| || |||||||| |||||||||| ||| || 
Sbjct: 1410 agaaatggaactgcaactgaaccctcagattcgacattctttagccatcctctgagtaag 1351

                                                                        
Query: 503  tagtttataacctcaggaacctcatcatgaggacagtgaccggcagggctgatttcataa 562
            |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||
Sbjct: 1350 tagtttataacctcaggaacctcatcatgagggcagtgaccagcaggactgatttcgtaa 1291

                                                      
Query: 563  tagggtgcttctgggacctgctgcttgactctgataccccaa 604
            || |||| |||||| |||||||| || ||| | |||||||||
Sbjct: 1290 tacggtgattctggcacctgctgtttcactttaataccccaa 1249



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 183  tctaggcatcaacatgactactttacataaagaataatgaatacaatatacaattgaagc 242
            ||||| ||||||  ||||||||||| |||||||||||||||||||||||   | ||||||
Sbjct: 1665 tctagacatcaaactgactactttaaataaagaataatgaatacaatatttgactgaagc 1606

                      
Query: 243  ttctaccatc 252
            ||||| ||||
Sbjct: 1605 ttctaacatc 1596



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  105 bits (53), Expect = 2e-19
 Identities = 158/193 (81%)
 Strand = Plus / Minus

                                                                            
Query: 323      agttggctccacatggaaatttgggaaccgaagagccgcacactaactgatttcttggac 382
                ||||||||||| | ||||||||  ||||| ||||| ||||||   || ||||| || || 
Sbjct: 14374050 agttggctccataaggaaattttagaaccaaagagtcgcacatggacagatttttttgat 14373991

                                                                            
Query: 383      cctgtcctaacaaactccagctccctcgataccccatgttcttcaaagctggaatcttca 442
                |||  ||||||||| ||||||||||| ||||| |||| |||  || ||||||  ||||||
Sbjct: 14373990 cctcccctaacaaattccagctcccttgatacaccattttcagcatagctgggttcttca 14373931

                                                                            
Query: 443      agaaatgggaggtcaactgtaccctcagactccacattcttaagccatcctcggagcaaa 502
                |||||||| |   |||||| ||||||||| || |||||||| |||||||||| ||| || 
Sbjct: 14373930 agaaatggaactgcaactgaaccctcagattcgacattctttagccatcctctgagtaag 14373871

                             
Query: 503      tagtttataacct 515
                |||||||||||||
Sbjct: 14373870 tagtttataacct 14373858



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                            
Query: 512      acctcaggaacctcatcatgaggacagtgaccggcagggctgatttcataatagggtgct 571
                ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||| |
Sbjct: 14372552 acctcaggaacctcatcatgagggcagtgaccagcaggactgatttcgtaatacggtgat 14372493

                                                 
Query: 572      tctgggacctgctgcttgactctgataccccaa 604
                ||||| |||||||| || ||| | |||||||||
Sbjct: 14372492 tctggcacctgctgtttcactttaataccccaa 14372460



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 183      tctaggcatcaacatgactactttacataaagaataatgaatacaatatacaattgaagc 242
                ||||| ||||||  ||||||||||| |||||||||||||||||||||||   | ||||||
Sbjct: 14374185 tctagacatcaaactgactactttaaataaagaataatgaatacaatatttgactgaagc 14374126

                          
Query: 243      ttctaccatc 252
                ||||| ||||
Sbjct: 14374125 ttctaacatc 14374116



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>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0526E12
          Length = 150872

 Score =  105 bits (53), Expect = 2e-19
 Identities = 158/193 (81%)
 Strand = Plus / Minus

                                                                          
Query: 323    agttggctccacatggaaatttgggaaccgaagagccgcacactaactgatttcttggac 382
              ||||||||||| | ||||||||  ||||| ||||| ||||||   || ||||| || || 
Sbjct: 101925 agttggctccataaggaaattttagaaccaaagagtcgcacatggacagatttttttgat 101866

                                                                          
Query: 383    cctgtcctaacaaactccagctccctcgataccccatgttcttcaaagctggaatcttca 442
              |||  ||||||||| ||||||||||| ||||| |||| |||  || ||||||  ||||||
Sbjct: 101865 cctcccctaacaaattccagctcccttgatacaccattttcagcatagctgggttcttca 101806

                                                                          
Query: 443    agaaatgggaggtcaactgtaccctcagactccacattcttaagccatcctcggagcaaa 502
              |||||||| |   |||||| ||||||||| || |||||||| |||||||||| ||| || 
Sbjct: 101805 agaaatggaactgcaactgaaccctcagattcgacattctttagccatcctctgagtaag 101746

                           
Query: 503    tagtttataacct 515
              |||||||||||||
Sbjct: 101745 tagtttataacct 101733



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                          
Query: 512    acctcaggaacctcatcatgaggacagtgaccggcagggctgatttcataatagggtgct 571
              ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||| |
Sbjct: 100427 acctcaggaacctcatcatgagggcagtgaccagcaggactgatttcgtaatacggtgat 100368

                                               
Query: 572    tctgggacctgctgcttgactctgataccccaa 604
              ||||| |||||||| || ||| | |||||||||
Sbjct: 100367 tctggcacctgctgtttcactttaataccccaa 100335



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                          
Query: 183    tctaggcatcaacatgactactttacataaagaataatgaatacaatatacaattgaagc 242
              ||||| ||||||  ||||||||||| |||||||||||||||||||||||   | ||||||
Sbjct: 102060 tctagacatcaaactgactactttaaataaagaataatgaatacaatatttgactgaagc 102001

                        
Query: 243    ttctaccatc 252
              ||||| ||||
Sbjct: 102000 ttctaacatc 101991



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>dbj|AK068937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003K12, full
            insert sequence
          Length = 1830

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 511  aacctcaggaacctcatcatgaggacagtgaccggcagggctgatttcataatagggtgc 570
            |||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||| 
Sbjct: 1323 aacctcaggaacctcatcatgagggcagtgaccagcaggactgatttcgtaatacggtga 1264

                                              
Query: 571  ttctgggacctgctgcttgactctgataccccaa 604
            |||||| |||||||| || ||| | |||||||||
Sbjct: 1263 ttctggcacctgctgtttcactttaataccccaa 1230



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>dbj|AK062125.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D07, full
           insert sequence
          Length = 395

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 183 tctaggcatcaacatgactactttacataaagaataatgaatacaatatacaattgaagc 242
           ||||| ||||||  ||||||||||| |||||||||||||||||||||||   | ||||||
Sbjct: 203 tctagacatcaaactgactactttaaataaagaataatgaatacaatatttgactgaagc 144

                     
Query: 243 ttctaccatc 252
           ||||| ||||
Sbjct: 143 ttctaacatc 134



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>gb|AC040926.5| Homo sapiens chromosome 8, clone RP11-776K3, complete sequence
          Length = 204177

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 209   ataaagaataatgaatacaat 229
             |||||||||||||||||||||
Sbjct: 80854 ataaagaataatgaatacaat 80874



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>gb|L16622.1| Caenorhabditis elegans cosmid C02D5, complete sequence
          Length = 28735

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 133  cacatattcacatccacaaca 153
            |||||||||||||||||||||
Sbjct: 6261 cacatattcacatccacaaca 6241



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>ref|NM_105370.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT1G67000 mRNA, complete cds
          Length = 2614

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 425  tcaaagctggaatcttcaag 444
            ||||||||||||||||||||
Sbjct: 2588 tcaaagctggaatcttcaag 2607



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>gb|AC095688.7| Rattus norvegicus 2 BAC CH230-9C20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 176590

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   cataaagaataatgaataca 227
             ||||||||||||||||||||
Sbjct: 40448 cataaagaataatgaataca 40467



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>gb|AF251497.1| Cloning vector HKBS1, complete sequence
          Length = 12538

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 139  ttcacatccacaacaaatatttga 162
            |||| |||||||||||||||||||
Sbjct: 3953 ttcaaatccacaacaaatatttga 3976



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>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   tcaaagctggaatcttcaag 444
             ||||||||||||||||||||
Sbjct: 33946 tcaaagctggaatcttcaag 33927



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>gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034K24, complete sequence
          Length = 142852

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tactacacatattcacatcc 147
             ||||||||||||||||||||
Sbjct: 73023 tactacacatattcacatcc 73004



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>emb|AL133325.20| Human DNA sequence from clone RP5-984P4 on chromosome 20 Contains the
              NKX2-2 gene for NK2 transcription factor related locus 2
              (Drosophila), a hydroxysteroid (17-beta) dehydrogenase 12
              (HSD17B12) pseudogene, the GSTM3P gene for glutathione
              S-transferase M3 pseudogene, a novel gene and two CpG
              islands, complete sequence
          Length = 160013

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    tacacatattcacatccaca 150
              ||||||||||||||||||||
Sbjct: 135075 tacacatattcacatccaca 135094



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>emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chromosome 11 Contains the 3'
              end of a novel gene and a CpG island, complete sequence
          Length = 189315

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 136    atattcacatccacaacaaatatt 159
              ||||||||||||| ||||||||||
Sbjct: 143578 atattcacatccaaaacaaatatt 143555



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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 578     acctgctgcttgactctgat 597
               ||||||||||||||||||||
Sbjct: 1708641 acctgctgcttgactctgat 1708622



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>gb|DP000049.1| Dasypus novemcinctus target 126 genomic scaffold
          Length = 405580

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    ttacataaagaataatgaat 224
              ||||||||||||||||||||
Sbjct: 274987 ttacataaagaataatgaat 274968



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>gb|CP000043.1| Bacillus cereus E33L plasmid pE33L8, complete sequence
          Length = 8191

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  aatgaatacaatatacaatt 237
            ||||||||||||||||||||
Sbjct: 3705 aatgaatacaatatacaatt 3686



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>gb|M57416.1|XENLUXAB Photorhabdus luminescens LuxD (luxD) gene, partial cds; luciferase
            alpha subunit (luxA) and luciferase beta subunit (luxB)
            genes, complete cds; and LuxE (luxE) gene, partial cds
          Length = 2553

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 139  ttcacatccacaacaaatatttga 162
            |||| |||||||||||||||||||
Sbjct: 1265 ttcaaatccacaacaaatatttga 1242



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>gb|M90093.1|XENLABCDEA Photorhabdus luminescens fatty acid reductase (luxC), acyltransferase
            (luxD), luciferase (luxA), luciferase (luxB), and luxE
            (luxE) genes, complete cds
          Length = 6960

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 139  ttcacatccacaacaaatatttga 162
            |||| |||||||||||||||||||
Sbjct: 3868 ttcaaatccacaacaaatatttga 3845



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>gb|M55977.1|XENLUXABB Photorhabdus luminescens LuxD (luxD) gene, partial cds; luciferase
            alpha subunit (luxA) and luciferase beta subunit (luxB)
            genes, complete cds; and LuxE (luxE) gene, partial cds
          Length = 2557

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 139  ttcacatccacaacaaatatttga 162
            |||| |||||||||||||||||||
Sbjct: 1173 ttcaaatccacaacaaatatttga 1150



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      tactacacatattcacatcc 147
                ||||||||||||||||||||
Sbjct: 23313952 tactacacatattcacatcc 23313971



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>emb|BX890578.6| Mouse DNA sequence from clone RP23-72P20 on chromosome X, complete
              sequence
          Length = 161519

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 579    cctgctgcttgactctgata 598
              ||||||||||||||||||||
Sbjct: 159371 cctgctgcttgactctgata 159390



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>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence
          Length = 202286

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ctgttgcttacctcaaactt 35
              ||||||||||||||||||||
Sbjct: 145322 ctgttgcttacctcaaactt 145341



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>gb|AC109637.3| Homo sapiens BAC clone RP11-325A18 from 2, complete sequence
          Length = 17704

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   aaagaataatgaatacaata 230
             ||||||||||||||||||||
Sbjct: 17040 aaagaataatgaatacaata 17059



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>gb|AC020547.7| Homo sapiens BAC clone RP11-134F3 from 2, complete sequence
          Length = 167739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  aaagaataatgaatacaata 230
            ||||||||||||||||||||
Sbjct: 1336 aaagaataatgaatacaata 1355



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>gb|AF241720.1| Penicillium sp. KCTC16087 small subunit ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 1351

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 actactttacataaagaata 218
           ||||||||||||||||||||
Sbjct: 67  actactttacataaagaata 48



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>gb|AY962893.1| Transcriptional fusion vector pUC18-mini-Tn7T-Gm-lux, complete
            sequence
          Length = 11299

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 139  ttcacatccacaacaaatatttga 162
            |||| |||||||||||||||||||
Sbjct: 5926 ttcaaatccacaacaaatatttga 5903



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>gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete sequence
          Length = 77605

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tactacacatattcacatcc 147
             ||||||||||||||||||||
Sbjct: 65923 tactacacatattcacatcc 65904



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>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete
             sequence
          Length = 70311

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tactacacatattcacatcc 147
             ||||||||||||||||||||
Sbjct: 58473 tactacacatattcacatcc 58454



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>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete
              sequence
          Length = 194283

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ctgttgcttacctcaaactt 35
              ||||||||||||||||||||
Sbjct: 167895 ctgttgcttacctcaaactt 167914



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>emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1012E15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196514

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gcatcaacatgactacttta 207
              ||||||||||||||||||||
Sbjct: 173106 gcatcaacatgactacttta 173125



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>emb|CR394552.9| Zebrafish DNA sequence from clone DKEYP-109B10 in linkage group 25,
              complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    caaatagtttataacctcag 518
              ||||||||||||||||||||
Sbjct: 151226 caaatagtttataacctcag 151245



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>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     aaagaataatgaatacaata 230
               ||||||||||||||||||||
Sbjct: 2220951 aaagaataatgaatacaata 2220932



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      tactacacatattcacatcc 147
                ||||||||||||||||||||
Sbjct: 23623862 tactacacatattcacatcc 23623881



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>emb|AL672069.10| Mouse DNA sequence from clone RP23-343O22 on chromosome X, complete
              sequence
          Length = 161147

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 579    cctgctgcttgactctgata 598
              ||||||||||||||||||||
Sbjct: 158999 cctgctgcttgactctgata 159018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,441,927
Number of Sequences: 3902068
Number of extensions: 5441927
Number of successful extensions: 100748
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100562
Number of HSP's gapped (non-prelim): 183
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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