ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah61h09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 1371 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 1312 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 1311 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 1252 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 1251 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 1192 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1191 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 1132 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 1131 cgccgtgatcccctc 1117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 30642257 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 30642198 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 30642197 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 30642138 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 30642137 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 30642078 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 30642077 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 30642018 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 30642017 cgccgtgatcccctc 30642003 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 30705825 cctccacgatgaacaccttgttcatcctctgctccgcgtacagcggccagcacagcagcg 30705884 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| ||| |||||||| ||||||||| Sbjct: 30705885 gcacccccgccgtgatcccctccagc 30705910 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgt 513 ||||||||||| | |||||||||||||| |||||||||| |||| ||||| ||| ||||| Sbjct: 30649868 caccttgttcatcttctgctccgcgtactgcggccagcacagcatcggcacccccgccgt 30649809 Query: 514 gatgccctccagc 526 ||||||||||||| Sbjct: 30649808 gatgccctccagc 30649796 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| ||||||| |||||||| ||||||| | | ||||||||||| |||||||||||| Sbjct: 30683462 catcaccaccccaagcttcatctcctccacgacgaacaccttgttcatcctctgctccgc 30683521 Query: 478 gtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||| ||||||||| | || |||| ||||||||||| | |||||||| Sbjct: 30683522 gtacatcggccagcaaaccataggcacccctgccgtgacggcctccagc 30683570 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 30688696 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 30688755 Query: 484 cggccagca 492 ||||||||| Sbjct: 30688756 cggccagca 30688764 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||| |||| || Sbjct: 37676113 cctccaccatgaacaccttgttcatcctctgctcggcgtagagcggccagcagagcatcg 37676172 Query: 501 gca 503 ||| Sbjct: 37676173 gca 37676175 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||||| |||||| Sbjct: 30670188 caccttgttcatcctctgctccgcgtacaacggcca 30670153 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||||| |||||| Sbjct: 30665011 caccttgttcatcctctgctccgcgtacaacggcca 30664976 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||| | |||||| Sbjct: 30661200 caccttgttcatcctctgctccgcgtataacggcca 30661165 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 |||| |||||| || ||||||||||||||||||||| Sbjct: 28841714 caccctgttcatccgctgctccgcgtacagcggcca 28841749
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 84534 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 84475 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 84474 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 84415 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 84414 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 84355 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 84354 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 84295 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 84294 cgccgtgatcccctc 84280 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 148102 cctccacgatgaacaccttgttcatcctctgctccgcgtacagcggccagcacagcagcg 148161 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| ||| |||||||| ||||||||| Sbjct: 148162 gcacccccgccgtgatcccctccagc 148187 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgt 513 ||||||||||| | |||||||||||||| |||||||||| |||| ||||| ||| ||||| Sbjct: 92145 caccttgttcatcttctgctccgcgtactgcggccagcacagcatcggcacccccgccgt 92086 Query: 514 gatgccctccagc 526 ||||||||||||| Sbjct: 92085 gatgccctccagc 92073 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| ||||||| |||||||| ||||||| | | ||||||||||| |||||||||||| Sbjct: 125739 catcaccaccccaagcttcatctcctccacgacgaacaccttgttcatcctctgctccgc 125798 Query: 478 gtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||| ||||||||| | || |||| ||||||||||| | |||||||| Sbjct: 125799 gtacatcggccagcaaaccataggcacccctgccgtgacggcctccagc 125847 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 130973 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 131032 Query: 484 cggccagca 492 ||||||||| Sbjct: 131033 cggccagca 131041 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||||| |||||| Sbjct: 112465 caccttgttcatcctctgctccgcgtacaacggcca 112430 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||||| |||||| Sbjct: 107288 caccttgttcatcctctgctccgcgtacaacggcca 107253 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||| | |||||| Sbjct: 103477 caccttgttcatcctctgctccgcgtataacggcca 103442
>dbj|AK119562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B10, full insert sequence Length = 1817 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 1487 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 1428 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 1427 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 1368 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 1367 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 1308 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1307 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 1248 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 1247 cgccgtgatcccctc 1233
>dbj|AK103129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119O19, full insert sequence Length = 1831 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 1488 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 1429 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 1428 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 1369 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 1368 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 1309 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1308 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 1249 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 1248 cgccgtgatcccctc 1234
>dbj|AK065450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008B02, full insert sequence Length = 1647 Score = 157 bits (79), Expect = 4e-35 Identities = 211/255 (82%) Strand = Plus / Minus Query: 268 agacgagcccccttccttgagcgcctcggcagctgcgaccttcgccgccgtcacccgctc 327 |||||||||||||||||||| ||||| ||| || || ||||| |||| | | | |||| Sbjct: 1470 agacgagcccccttccttgatcgcctgggccgccgcatccttcaccgcggccgcgcgctg 1411 Query: 328 cctgagtgcattgccgccctcggacgccatgacccatctgaccttctcttccacctccac 387 |||||| || | ||||||||||||| |||| ||||| ||||||||| | ||||||||| | Sbjct: 1410 cctgagcgcctggccgccctcggactccatcacccacctgaccttcgcctccacctcctc 1351 Query: 388 gcccttaaccagctcttcattgtagcctctcatctccaccccgagcttcattccctccac 447 || |||| ||| || | |||||| ||||||||||| || |||||||| ||||||| Sbjct: 1350 cgccaccaccacctcctcgtcgtagcccctcatctccacgccaagcttcatctcctccac 1291 Query: 448 tatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccc 507 | | ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 1290 gacgaacaccttgttcagcctctgctccgcgtacagcggccagcacagcagcggcagccc 1231 Query: 508 tgccgtgatgccctc 522 |||||||| ||||| Sbjct: 1230 cgccgtgatcccctc 1216
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 416 ctcatctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctcc 475 |||||||||||||| |||||||| ||||||| || |||||||||||| | |||||||| Sbjct: 154576 ctcatctccacccctagcttcatctcctccacgatccgcaccttgttcatcttctgctcc 154635 Query: 476 gcgtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||||||||||||||| |||||||||| ||| |||| || |||||||||| Sbjct: 154636 gcgtacagcggccagcacagcagcggcagccccgccgcgacgccctccagc 154686
>ref|NM_191572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1195 cctccacgatgaacaccttgttcatcctctgctccgcgtacagcggccagcacagcagcg 1136 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| ||| |||||||| ||||||||| Sbjct: 1135 gcacccccgccgtgatcccctccagc 1110
>dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114D10, full insert sequence Length = 3206 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 168 cctccacgatgaacaccttgttcatcctctgctccgcgtacagcggccagcacagcagcg 227 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| ||| |||||||| ||||||||| Sbjct: 228 gcacccccgccgtgatcccctccagc 253
>dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J15, full insert sequence Length = 1674 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1279 cctccacgatgaacaccttgttcatcctctgctccgcgtacagcggccagcacagcagcg 1220 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| ||| |||||||| ||||||||| Sbjct: 1219 gcacccccgccgtgatcccctccagc 1194
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 345 cctcggacgccatgacccatctgaccttctcttccacctccacgcccttaaccagctctt 404 ||||| || |||||||| | || ||||||| ||||||||| || |||| |||||||| | Sbjct: 12319 cctcgaactccatgaccaacctcaccttcttctccacctcctcggccttgaccagctcct 12260 Query: 405 cattgtagcctctcatctccaccccgagcttcattccctccactatgtgcaccttgttca 464 ||| |||||| |||| |||| ||||||| ||| || ||||| | | |||||||||||| Sbjct: 12259 catcgtagccgtccatcaccactccgagctgcatgccatccaccaagagcaccttgttca 12200 Query: 465 ccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||| |||||| |||||||||| |||| ||||| Sbjct: 12199 tcctctgctcggcgtactgcggccagcacagcatcggca 12161 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| |||||||||||| ||| || ||||| | | |||||||||||| ||||||||| || Sbjct: 15519 catcaccaccccgagctgcatcccgtccaccacgagcaccttgttcagcctctgctcggc 15460 Query: 478 gtacagcggccagcatagca 497 |||| |||||||||| |||| Sbjct: 15459 gtactgcggccagcacagca 15440 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 433 cttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||||||| ||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 19560 cttcatttcctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccagca 19619 Query: 493 tagcagcggca 503 || || ||||| Sbjct: 19620 tatcatcggca 19630 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||||| ||||||||||||||| ||||||||||| ||||| |||| Sbjct: 53918 caccttgttcagcctctgctccgcgtagagcggccagcacagcagtggca 53967 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| | ||||||||||||||||||||| |||| || || Sbjct: 16767 cctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccaacatatcatcg 16826 Query: 501 gca 503 ||| Sbjct: 16827 gca 16829 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 459 tgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgtgatgc 518 |||||| | ||||||||| || |||||||||||| |||| ||||| || || ||||| | Sbjct: 35524 tgttcatcttctgctccgagtgcagcggccagcacagcatcggcacgcccgcggtgatcc 35583 Query: 519 cctccagc 526 |||||||| Sbjct: 35584 cctccagc 35591 Score = 44.1 bits (22), Expect = 0.46 Identities = 70/86 (81%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| | |||||||||| | ||||||| | ||| ||||||||||| |||| | Sbjct: 24354 cctccaccatgagaaccttgttcatcttctgctcagagtagagcggccagcacagcattg 24413 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| || || ||||| ||||||||| Sbjct: 24414 gcacacccgcggtgatcccctccagc 24439 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagca 497 ||||||| ||| | |||||||||| | ||||||||| || ||||||||||| |||| Sbjct: 44365 cctccaccatgagaaccttgttcatcttctgctccgagtggagcggccagcacagca 44421
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 345 cctcggacgccatgacccatctgaccttctcttccacctccacgcccttaaccagctctt 404 ||||| || |||||||| | || ||||||| ||||||||| || |||| |||||||| | Sbjct: 90629 cctcgaactccatgaccaacctcaccttcttctccacctcctcggccttgaccagctcct 90570 Query: 405 cattgtagcctctcatctccaccccgagcttcattccctccactatgtgcaccttgttca 464 ||| |||||| |||| |||| ||||||| ||| || ||||| | | |||||||||||| Sbjct: 90569 catcgtagccgtccatcaccactccgagctgcatgccatccaccaagagcaccttgttca 90510 Query: 465 ccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||| |||||| |||||||||| |||| ||||| Sbjct: 90509 tcctctgctcggcgtactgcggccagcacagcatcggca 90471 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| |||||||||||| ||| || ||||| | | |||||||||||| ||||||||| || Sbjct: 93829 catcaccaccccgagctgcatcccgtccaccacgagcaccttgttcagcctctgctcggc 93770 Query: 478 gtacagcggccagcatagca 497 |||| |||||||||| |||| Sbjct: 93769 gtactgcggccagcacagca 93750 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 433 cttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||||||| ||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 97870 cttcatttcctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccagca 97929 Query: 493 tagcagcggca 503 || || ||||| Sbjct: 97930 tatcatcggca 97940 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| | ||||||||||||||||||||| |||| || || Sbjct: 95077 cctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccaacatatcatcg 95136 Query: 501 gca 503 ||| Sbjct: 95137 gca 95139 Score = 44.1 bits (22), Expect = 0.46 Identities = 70/86 (81%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| | |||||||||| | ||||||| | ||| ||||||||||| |||| | Sbjct: 102664 cctccaccatgagaaccttgttcatcttctgctcagagtagagcggccagcacagcattg 102723 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| || || ||||| ||||||||| Sbjct: 102724 gcacacccgcggtgatcccctccagc 102749
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 345 cctcggacgccatgacccatctgaccttctcttccacctccacgcccttaaccagctctt 404 ||||| || |||||||| | || ||||||| ||||||||| || |||| |||||||| | Sbjct: 25987558 cctcgaactccatgaccaacctcaccttcttctccacctcctcggccttgaccagctcct 25987499 Query: 405 cattgtagcctctcatctccaccccgagcttcattccctccactatgtgcaccttgttca 464 ||| |||||| |||| |||| ||||||| ||| || ||||| | | |||||||||||| Sbjct: 25987498 catcgtagccgtccatcaccactccgagctgcatgccatccaccaagagcaccttgttca 25987439 Query: 465 ccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||| |||||| |||||||||| |||| ||||| Sbjct: 25987438 tcctctgctcggcgtactgcggccagcacagcatcggca 25987400 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| |||||||||||| ||| || ||||| | | |||||||||||| ||||||||| || Sbjct: 25990758 catcaccaccccgagctgcatcccgtccaccacgagcaccttgttcagcctctgctcggc 25990699 Query: 478 gtacagcggccagcatagca 497 |||| |||||||||| |||| Sbjct: 25990698 gtactgcggccagcacagca 25990679 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 433 cttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||||||| ||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 25994799 cttcatttcctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccagca 25994858 Query: 493 tagcagcggca 503 || || ||||| Sbjct: 25994859 tatcatcggca 25994869 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||||| ||||||||||||||| ||||||||||| ||||| |||| Sbjct: 26029157 caccttgttcagcctctgctccgcgtagagcggccagcacagcagtggca 26029206 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| | ||||||||||||||||||||| |||| || || Sbjct: 25992006 cctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccaacatatcatcg 25992065 Query: 501 gca 503 ||| Sbjct: 25992066 gca 25992068 Score = 48.1 bits (24), Expect = 0.029 Identities = 57/68 (83%) Strand = Plus / Plus Query: 459 tgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgtgatgc 518 |||||| | ||||||||| || |||||||||||| |||| ||||| || || ||||| | Sbjct: 26010763 tgttcatcttctgctccgagtgcagcggccagcacagcatcggcacgcccgcggtgatcc 26010822 Query: 519 cctccagc 526 |||||||| Sbjct: 26010823 cctccagc 26010830 Score = 44.1 bits (22), Expect = 0.46 Identities = 70/86 (81%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| | |||||||||| | ||||||| | ||| ||||||||||| |||| | Sbjct: 25999593 cctccaccatgagaaccttgttcatcttctgctcagagtagagcggccagcacagcattg 25999652 Query: 501 gcaaccctgccgtgatgccctccagc 526 ||| || || ||||| ||||||||| Sbjct: 25999653 gcacacccgcggtgatcccctccagc 25999678 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagca 497 ||||||| ||| | |||||||||| | ||||||||| || ||||||||||| |||| Sbjct: 26019604 cctccaccatgagaaccttgttcatcttctgctccgagtggagcggccagcacagca 26019660
>dbj|AK071910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064H13, full insert sequence Length = 1587 Score = 93.7 bits (47), Expect = 5e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 440 ccctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagc 499 |||||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| | Sbjct: 1303 ccctccaccatgagcaccttgttcatcctctgctccgcgtacagcggccagcagagcatc 1244 Query: 500 ggcaaccctgccgtgatgccctc 522 |||| ||| || ||||| ||||| Sbjct: 1243 ggcacccccgcggtgatcccctc 1221
>dbj|AK066551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074J04, full insert sequence Length = 1821 Score = 93.7 bits (47), Expect = 5e-16 Identities = 131/159 (82%) Strand = Plus / Minus Query: 345 cctcggacgccatgacccatctgaccttctcttccacctccacgcccttaaccagctctt 404 ||||| || |||||||| | || ||||||| ||||||||| || |||| |||||||| | Sbjct: 1419 cctcgaactccatgaccaacctcaccttcttctccacctcctcggccttgaccagctcct 1360 Query: 405 cattgtagcctctcatctccaccccgagcttcattccctccactatgtgcaccttgttca 464 ||| |||||| |||| |||| ||||||| ||| || ||||| | | |||||||||||| Sbjct: 1359 catcgtagccgtccatcaccactccgagctgcatgccatccaccaagagcaccttgttca 1300 Query: 465 ccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||| |||||| |||||||||| |||| ||||| Sbjct: 1299 tcctctgctcggcgtactgcggccagcacagcatcggca 1261
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| || Sbjct: 116053 cctccaccatgagcaccttgttcatcctctgctccgcgtacagcggccagcagagcatcg 116112 Query: 501 gcaaccctgccgtgatgccctc 522 ||| ||| || ||||| ||||| Sbjct: 116113 gcacccccgcggtgatcccctc 116134 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 453 gcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggca 503 |||||||||||| |||||| |||||||||||||||||||| |||| ||||| Sbjct: 92425 gcaccttgttcatcctctgttccgcgtacagcggccagcagagcatcggca 92475 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 443 tccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggc 502 ||||| ||| |||||||||| | ||||||||||||||||| |||||||| |||| |||| Sbjct: 131240 tccaccatgagcaccttgttgatcctctgctccgcgtacattggccagcagagcatcggc 131299 Query: 503 aaccctgccgtgatgccctccagc 526 | || || ||||| ||||||||| Sbjct: 131300 acgcccgcggtgatcccctccagc 131323
>dbj|AK105917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H11, full insert sequence Length = 1587 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| || Sbjct: 1300 cctccaccatgagcaccttgttcatcctctgctccgcgtacagcggccagcagagcatcg 1241 Query: 501 gcaaccctgccgtgatgccctc 522 ||| ||| || ||||| ||||| Sbjct: 1240 gcacccccgcggtgatcccctc 1219
>dbj|AK099026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127L05, full insert sequence Length = 1581 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| || Sbjct: 1296 cctccaccatgagcaccttgttcatcctctgctccgcgtacagcggccagcagagcatcg 1237 Query: 501 gcaaccctgccgtgatgccctc 522 ||| ||| || ||||| ||||| Sbjct: 1236 gcacccccgcggtgatcccctc 1215
>ref|NM_191561.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgt 513 ||||||||||| | |||||||||||||| |||||||||| |||| ||||| ||| ||||| Sbjct: 1197 caccttgttcatcttctgctccgcgtactgcggccagcacagcatcggcacccccgccgt 1138 Query: 514 gatgccctccagc 526 ||||||||||||| Sbjct: 1137 gatgccctccagc 1125
>dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093B13, full insert sequence Length = 1779 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgt 513 ||||||||||| | |||||||||||||| |||||||||| |||| ||||| ||| ||||| Sbjct: 1306 caccttgttcatcttctgctccgcgtactgcggccagcacagcatcggcacccccgccgt 1247 Query: 514 gatgccctccagc 526 ||||||||||||| Sbjct: 1246 gatgccctccagc 1234
>dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D01, full insert sequence Length = 1664 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggcaaccctgccgt 513 ||||||||||| | |||||||||||||| |||||||||| |||| ||||| ||| ||||| Sbjct: 1257 caccttgttcatcttctgctccgcgtactgcggccagcacagcatcggcacccccgccgt 1198 Query: 514 gatgccctccagc 526 ||||||||||||| Sbjct: 1197 gatgccctccagc 1185
>ref|NM_191567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| ||||||| |||||||| ||||||| | | ||||||||||| |||||||||||| Sbjct: 1224 catcaccaccccaagcttcatctcctccacgacgaacaccttgttcatcctctgctccgc 1165 Query: 478 gtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||| ||||||||| | || |||| ||||||||||| | |||||||| Sbjct: 1164 gtacatcggccagcaaaccataggcacccctgccgtgacggcctccagc 1116
>dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-G02, full insert sequence Length = 1463 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| ||||||| |||||||| ||||||| | | ||||||||||| |||||||||||| Sbjct: 66 catcaccaccccaagcttcatctcctccacgacgaacaccttgttcatcctctgctccgc 125 Query: 478 gtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||| ||||||||| | || |||| ||||||||||| | |||||||| Sbjct: 126 gtacatcggccagcaaaccataggcacccctgccgtgacggcctccagc 174
>dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E08, full insert sequence Length = 1603 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 418 catctccaccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgc 477 |||| ||||||| |||||||| ||||||| | | ||||||||||| |||||||||||| Sbjct: 1249 catcaccaccccaagcttcatctcctccacgacgaacaccttgttcatcctctgctccgc 1190 Query: 478 gtacagcggccagcatagcagcggcaaccctgccgtgatgccctccagc 526 ||||| ||||||||| | || |||| ||||||||||| | |||||||| Sbjct: 1189 gtacatcggccagcaaaccataggcacccctgccgtgacggcctccagc 1141
>ref|NM_191569.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 1185 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 1126 Query: 484 cggccagca 492 ||||||||| Sbjct: 1125 cggccagca 1117
>dbj|AK103355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126K03, full insert sequence Length = 1708 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 1268 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 1209 Query: 484 cggccagca 492 ||||||||| Sbjct: 1208 cggccagca 1200
>dbj|AK099365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048K03, full insert sequence Length = 1651 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 1209 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 1150 Query: 484 cggccagca 492 ||||||||| Sbjct: 1149 cggccagca 1141
>dbj|AK064298.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A05, full insert sequence Length = 1717 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 424 caccccgagcttcattccctccactatgtgcaccttgttcaccctctgctccgcgtacag 483 |||||| |||||||| ||||||| | |||| | ||||||| |||||||||||||||||| Sbjct: 1215 caccccaagcttcatctcctccaccaggtgcgctttgttcagcctctgctccgcgtacag 1156 Query: 484 cggccagca 492 ||||||||| Sbjct: 1155 cggccagca 1147
>dbj|AK110876.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G03, full insert sequence Length = 1514 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagcagcggca 503 ||||||||||| ||||||||||||||| ||||||||||| ||||| |||| Sbjct: 1178 caccttgttcagcctctgctccgcgtagagcggccagcacagcagtggca 1129
>gb|BT017400.1| Zea mays clone EL01N0328H09.c mRNA sequence Length = 1152 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggccagcatagca 497 ||||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 716 caccttgttcaccctctgctcggcgtacatcggccagcacagca 673
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 443 tccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcggc 502 ||||| ||| |||||||||| | ||||||||||||||||| |||||||| |||| |||| Sbjct: 18488810 tccaccatgagcaccttgttgatcctctgctccgcgtacattggccagcagagcatcggc 18488869 Query: 503 aaccctgccgtgatgccctccagc 526 | || || ||||| ||||||||| Sbjct: 18488870 acgcccgcggtgatcccctccagc 18488893
>ref|NM_190780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||| |||| || Sbjct: 1213 cctccaccatgaacaccttgttcatcctctgctcggcgtagagcggccagcagagcatcg 1154 Query: 501 gca 503 ||| Sbjct: 1153 gca 1151
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||| |||| || Sbjct: 136587 cctccaccatgaacaccttgttcatcctctgctcggcgtagagcggccagcagagcatcg 136646 Query: 501 gca 503 ||| Sbjct: 136647 gca 136649
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||| |||| || Sbjct: 4414 cctccaccatgaacaccttgttcatcctctgctcggcgtagagcggccagcagagcatcg 4473 Query: 501 gca 503 ||| Sbjct: 4474 gca 4476
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| | |||||||||||||||||||||||||| || || Sbjct: 161628 cctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccagcatatcatcg 161687 Query: 501 gca 503 ||| Sbjct: 161688 gca 161690
>dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001K02, full insert sequence Length = 1597 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| | |||||||||||||||||||||||||| || || Sbjct: 1102 cctccaccatgatcaccttgttcatcgcctgctccgcgtacagcggccagcatatcatcg 1043 Query: 501 gca 503 ||| Sbjct: 1042 gca 1040
>dbj|AK063342.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-B02, full insert sequence Length = 1418 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagcagcg 500 ||||||| ||| ||||||||||| ||||||||| ||||| ||||||||||| |||| || Sbjct: 852 cctccaccatgaacaccttgttcatcctctgctcggcgtagagcggccagcagagcatcg 793 Query: 501 gca 503 ||| Sbjct: 792 gca 790
>dbj|AK108266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B10, full insert sequence Length = 1688 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||||| |||||| Sbjct: 1197 caccttgttcatcctctgctccgcgtacaacggcca 1162
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 460 gttcaccctctgctccgcgtacagcggcca 489 ||||||| |||||||||||||||||||||| Sbjct: 8052351 gttcaccttctgctccgcgtacagcggcca 8052322
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 460 gttcaccctctgctccgcgtacagcggcca 489 ||||||| |||||||||||||||||||||| Sbjct: 40544 gttcaccttctgctccgcgtacagcggcca 40515
>ref|NM_191562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||| | |||||| Sbjct: 1176 caccttgttcatcctctgctccgcgtataacggcca 1141
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 |||| |||||| || ||||||||||||||||||||| Sbjct: 1203 caccctgttcatccgctgctccgcgtacagcggcca 1168
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||| |||||| | |||||||||||| ||||||||||| Sbjct: 77828 cctccaccatgagcaccctgttcatcgcctgctccgcgtaaagcggccagca 77879
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||| |||||| | |||||||||||| ||||||||||| Sbjct: 35076927 cctccaccatgagcaccctgttcatcgcctgctccgcgtaaagcggccagca 35076978
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 13586809 cctccacgatgaacaccttgttcatccactgctccgcgtcgagcggccagca 13586860
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||| |||||| | |||||||||||| ||||||||||| Sbjct: 35166999 cctccaccatgagcaccctgttcatcgcctgctccgcgtaaagcggccagca 35167050
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 |||| |||||| || ||||||||||||||||||||| Sbjct: 59757 caccctgttcatccgctgctccgcgtacagcggcca 59792
>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0459H02 Length = 168230 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 115299 cctccacgatgaacaccttgttcatccactgctccgcgtcgagcggccagca 115350
>dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D12, full insert sequence Length = 1658 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 ||||||||||| ||||||||||||||| | |||||| Sbjct: 1301 caccttgttcatcctctgctccgcgtataacggcca 1266
>dbj|AK106646.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E11, full insert sequence Length = 2055 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Plus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 628 cctccacgatgaacaccttgttcatccactgctccgcgtcgagcggccagca 679
>dbj|AK102481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094L01, full insert sequence Length = 1918 Score = 48.1 bits (24), Expect = 0.029 Identities = 45/52 (86%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1235 cctccacgatgaacaccttgttcatccactgctccgcgtcgagcggccagca 1184
>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full insert sequence Length = 1727 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgctccgcgtacagcggcca 489 |||| |||||| || ||||||||||||||||||||| Sbjct: 1264 caccctgttcatccgctgctccgcgtacagcggcca 1229
>emb|BX005339.7| Zebrafish DNA sequence from clone DKEY-71C4, complete sequence Length = 172485 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 gtacaaatttatgtaaaataata 106 ||||||||||||||||||||||| Sbjct: 21623 gtacaaatttatgtaaaataata 21645
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 393 taaccagctcttcattgtagcct 415 ||||||||||||||||||||||| Sbjct: 1115342 taaccagctcttcattgtagcct 1115320
>gb|AE014828.1| Plasmodium falciparum 3D7 chromosome 14 section 13 of 13 of the complete sequence Length = 273275 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 acaaatttatgtaaaataatataatt 111 ||||||||||||| |||||||||||| Sbjct: 213390 acaaatttatgtataataatataatt 213415
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 atgtaaaataatataattaactcagaaata 123 ||||||||||| ||||||||| |||||||| Sbjct: 101772 atgtaaaataaaataattaacccagaaata 101743
>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete sequence Length = 124955 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 cacatatcaaggtcaacaagtt 195 |||||||||||||||||||||| Sbjct: 63678 cacatatcaaggtcaacaagtt 63657
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 94 atgtaaaataatataattaactcagaaata 123 ||||||||||| ||||||||| |||||||| Sbjct: 36347 atgtaaaataaaataattaacccagaaata 36318
>gb|AC005473.1|AC005473 Drosophila melanogaster, chromosome 2R, region 44A3-44A4, P1 clone DS02142, complete sequence Length = 76743 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 94 atgtaaaataatataattaactcagaaata 123 ||||||||||| ||||||||| |||||||| Sbjct: 32577 atgtaaaataaaataattaacccagaaata 32606
>ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 305 ctgctccgcgtacagcggcca 325
>ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA Length = 1747 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 406 ctgctccgcgtacagcggcca 426
>ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA Length = 1790 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 362 ctgctccgcgtacagcggcca 382
>ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1182 ctgctccgcgtacagcggcca 1162
>ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1273 ctgctccgcgtacagcggcca 1253
>ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1245 ctgctccgcgtacagcggcca 1225
>ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.24 mRNA Length = 1709 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1275 ctgctccgcgtacagcggcca 1255
>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 acaaatttatgtaaaataata 106 ||||||||||||||||||||| Sbjct: 35292 acaaatttatgtaaaataata 35312
>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence Length = 173862 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 acaaatttatgtaaaataata 106 ||||||||||||||||||||| Sbjct: 161581 acaaatttatgtaaaataata 161601
>emb|AL591042.5| Human DNA sequence from clone RP11-480L11 on chromosome 1 Contains part of the VAV3 gene for VAV3 oncogene, complete sequence Length = 148028 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gtacaaatttatgtaaaataa 104 ||||||||||||||||||||| Sbjct: 68270 gtacaaatttatgtaaaataa 68290
>emb|AL121965.19|HSJ161I14 Human DNA sequence from clone RP1-161I14 on chromosome 6q16.1-16.3 Contains part of the RNAH gene for an RNA helicase, complete sequence Length = 113022 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 taaaataatataattaactcagaaa 121 |||| |||||||||||||||||||| Sbjct: 95784 taaattaatataattaactcagaaa 95760
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 tcagaaataaacctagtcccc 135 ||||||||||||||||||||| Sbjct: 46690 tcagaaataaacctagtcccc 46710
>emb|BX284627.4| Mouse DNA sequence from clone RP23-135G12 on chromosome 11 Contains part of a novel gene, complete sequence Length = 69437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ccatctgaccttctcttccac 381 ||||||||||||||||||||| Sbjct: 39783 ccatctgaccttctcttccac 39803
>emb|AL606472.13| Mouse DNA sequence from clone RP23-66B21 on chromosome 13 Contains the V1rh18 gene for vomeronasal 1 receptor H18 and six vomeronasal 1 receptor I (V1ri) pseudogenes, complete sequence Length = 130721 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tataattaactcagaaataaa 125 ||||||||||||||||||||| Sbjct: 16436 tataattaactcagaaataaa 16456
>gb|AC150705.16| Medicago truncatula clone mth2-132b13, complete sequence Length = 121342 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 461 ttcaccctctgctccgcgtacagcggcca 489 |||| ||||||||||||||| |||||||| Sbjct: 35616 ttcatcctctgctccgcgtaaagcggcca 35588
>dbj|AB198666.1| Linaria vulgaris L4'CGT mRNA for UDP-glucose glucosyltransferase, complete cds Length = 1365 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 461 ttcaccctctgctccgcgtacagcggcca 489 |||| ||||||||| |||||||||||||| Sbjct: 1130 ttcatcctctgctctgcgtacagcggcca 1102
>emb|BX248236.16| Zebrafish DNA sequence from clone CH211-207B24 in linkage group 3, complete sequence Length = 228572 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 acaaatttatgtaaaataata 106 ||||||||||||||||||||| Sbjct: 64644 acaaatttatgtaaaataata 64624
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcagaaataaacctagtcccc 135 ||||||||||||||||||||| Sbjct: 20119801 tcagaaataaacctagtcccc 20119781
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 19008455 ctgctccgcgtacagcggcca 19008435 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 18985586 ctgctccgcgtacagcggcca 18985566 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 18954797 ctgctccgcgtacagcggcca 18954817
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 110440 ctgctccgcgtacagcggcca 110420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 87571 ctgctccgcgtacagcggcca 87551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 56782 ctgctccgcgtacagcggcca 56802
>dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A05, full insert sequence Length = 1686 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1245 ctgctccgcgtacagcggcca 1225
>dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G10, full insert sequence Length = 1709 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1275 ctgctccgcgtacagcggcca 1255
>dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A09, full insert sequence Length = 1785 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 1273 ctgctccgcgtacagcggcca 1253
>dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I03, full insert sequence Length = 1790 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 361 ctgctccgcgtacagcggcca 381
>dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028A15, full insert sequence Length = 1640 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 304 ctgctccgcgtacagcggcca 324
>dbj|AK068336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149H05, full insert sequence Length = 1219 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagca 497 ||||||| ||| | |||||||||| | ||||||||| || ||||||||||| |||| Sbjct: 696 cctccaccatgagaaccttgttcatcttctgctccgagtggagcggccagcacagca 640
>dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F04, full insert sequence Length = 1747 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ctgctccgcgtacagcggcca 489 ||||||||||||||||||||| Sbjct: 406 ctgctccgcgtacagcggcca 426
>dbj|AK060997.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E09, full insert sequence Length = 1686 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagcatagca 497 ||||||| ||| | |||||||||| | ||||||||| || ||||||||||| |||| Sbjct: 1270 cctccaccatgagaaccttgttcatcttctgctccgagtggagcggccagcacagca 1214
>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3, complete sequence Length = 174887 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 acaaatttatgtaaaataata 106 ||||||||||||||||||||| Sbjct: 48966 acaaatttatgtaaaataata 48986
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcagaaataaacctagtcccc 135 ||||||||||||||||||||| Sbjct: 20131077 tcagaaataaacctagtcccc 20131057
>gb|AC154901.1| Prunus persica (peach) BAC clone 82I18, complete sequence Length = 73299 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 agctcttcattgtagcctct 417 |||||||||||||||||||| Sbjct: 13701 agctcttcattgtagcctct 13720
>ref|XM_471137.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cgaccttcgccgccgtcacc 322 |||||||||||||||||||| Sbjct: 530 cgaccttcgccgccgtcacc 511
>gb|AC093098.2| Drosophila melanogaster clone BACR29G22, complete sequence Length = 153749 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atgtaaaataatataattaa 113 |||||||||||||||||||| Sbjct: 20220 atgtaaaataatataattaa 20239
>gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete sequence Length = 170684 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atgtaaaataatataattaa 113 |||||||||||||||||||| Sbjct: 156608 atgtaaaataatataattaa 156627
>ref|XM_425820.1| PREDICTED: Gallus gallus similar to leucine rich repeat neuronal 5 precursor; glioma amplified on chromosome 1 protein; leucine rich and ankyrin repeats 1 (LOC428261), mRNA Length = 2091 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 gcctctcatctccaccccgagctt 435 ||||||||||||||||| |||||| Sbjct: 1260 gcctctcatctccacccagagctt 1283
>ref|NM_144860.2| Mus musculus mindbomb homolog 1 (Drosophila) (Mib1), mRNA Length = 3793 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 1992 ccttaaccagctcttcattg 1973
>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence Length = 207139 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 167659 ccttaaccagctcttcattg 167640
>gb|AY147848.1| Mus musculus MINDBOMB (Mib) mRNA, complete cds Length = 3235 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 1491 ccttaaccagctcttcattg 1472
>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 177539 ccttaaccagctcttcattg 177558
>gb|AC005845.13| Homo sapiens 12 PAC RP3-454B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 60101 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 caccttgttcaccctctgct 473 |||||||||||||||||||| Sbjct: 12972 caccttgttcaccctctgct 12953
>ref|XM_947582.1| Theileria annulata strain Ankara hypothetical protein (TA12035) partial mRNA Length = 4539 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tagtacaaatttatgtaaaa 101 |||||||||||||||||||| Sbjct: 24 tagtacaaatttatgtaaaa 5
>ref|XM_948352.1| Theileria annulata strain Ankara hypothetical protein (TA09845) partial mRNA Length = 684 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 85 tacaaatttatgtaa--aataatataattaa 113 ||||||||||||||| |||||||||||||| Sbjct: 53 tacaaatttatgtaataaataatataattaa 83
>ref|XM_663159.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.70367) partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ataattaactcagaaataaa 125 |||||||||||||||||||| Sbjct: 1154 ataattaactcagaaataaa 1135
>gb|AC149293.21| Medicago truncatula clone mth2-78c5, complete sequence Length = 111412 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aatttaagataacttatacacatg 61 ||||||||||||||| |||||||| Sbjct: 106802 aatttaagataacttttacacatg 106779
>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7, complete sequence Length = 197310 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aaatttatgtaaaataatataatt 111 |||| ||||||||||||||||||| Sbjct: 89159 aaatgtatgtaaaataatataatt 89136
>gb|AC147780.10| Medicago truncatula clone mth2-36n9, complete sequence Length = 102831 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 aatttaagataacttatacacatg 61 ||||||||||||||| |||||||| Sbjct: 70239 aatttaagataacttttacacatg 70216
>emb|AJ748131.1| Streptomyces ribosidificus ribostamycin biosynthetic gene cluster Length = 31892 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tcgccgccgtcacccgctcc 328 |||||||||||||||||||| Sbjct: 12574 tcgccgccgtcacccgctcc 12593
>emb|AL391684.6| Human DNA sequence from clone RP11-441O15 on chromosome 10 Contains the CNNM1 gene for cyclin M1, the GOT1 gene for glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1), a novel gene and two CpG islands, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tatgtaaaataatataatta 112 |||||||||||||||||||| Sbjct: 4464 tatgtaaaataatataatta 4483
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cgaccttcgccgccgtcacc 322 |||||||||||||||||||| Sbjct: 120011 cgaccttcgccgccgtcacc 120030
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gcggccagcatagcagcggc 502 |||||||||||||||||||| Sbjct: 148377 gcggccagcatagcagcggc 148396
>emb|BX571659.1| Wolinella succinogenes, complete genome; segment 3/7 Length = 349970 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gcccccttccttgagcgcct 293 |||||||||||||||||||| Sbjct: 266131 gcccccttccttgagcgcct 266150
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cgaccttcgccgccgtcacc 322 |||||||||||||||||||| Sbjct: 72326 cgaccttcgccgccgtcacc 72345
>emb|AJ605341.1| Mesobuthus eupeus partial gene for CG9896-like protein, exons 1-4, haplotype Meu Length = 592 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acaaatttatgtaaaataat 105 |||||||||||||||||||| Sbjct: 105 acaaatttatgtaaaataat 86
>emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22, complete sequence Length = 252905 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 caccttgttcaccctctgct 473 |||||||||||||||||||| Sbjct: 104719 caccttgttcaccctctgct 104738
>gb|AC119744.3| Homo sapiens 3 BAC RP11-744O11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100400 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 atgtaaaataatataattaa 113 |||||||||||||||||||| Sbjct: 56997 atgtaaaataatataattaa 57016
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tacaaatttatgtaaaataa 104 |||||||||||||||||||| Sbjct: 96417 tacaaatttatgtaaaataa 96398
>gb|AC099515.2| Homo sapiens chromosome 5 clone RP11-455D3, complete sequence Length = 150339 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 aatataattaactcagaaataaac 126 |||| ||||||||||||||||||| Sbjct: 129519 aataaaattaactcagaaataaac 129496
>gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, complete sequence Length = 176656 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 aatataattaactcagaaataaac 126 |||| ||||||||||||||||||| Sbjct: 86258 aataaaattaactcagaaataaac 86281
>gb|AC092355.2| Homo sapiens chromosome 7 clone RP11-310D24, complete sequence Length = 91792 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ataattaactcagaaataaa 125 |||||||||||||||||||| Sbjct: 85836 ataattaactcagaaataaa 85855
>ref|XM_628491.1| Cryptosporidium parvum Iowa II cleft lip and palate family of eukaryotic membrane proteins (potential transporters) with 9 transmembrane domains (cgd7_3290), partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ataattaactcagaaataaa 125 |||||||||||||||||||| Sbjct: 1154 ataattaactcagaaataaa 1135
>gb|AY245539.1| Mus musculus DAPK-interacting protein-1 mRNA, complete cds Length = 3793 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 1992 ccttaaccagctcttcattg 1973
>dbj|AK080847.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230369E20 product:hypothetical Ankyrin repeat profile/Cysteine-rich region/Ankyrin-repeat/RING finger/Ankyrin repeat region circular profile/Yeast DNA-binding domain containing protein, full insert sequence Length = 4080 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 268 ccttaaccagctcttcattg 249
>gb|AY974091.1| Mus musculus mind bomb-1 mRNA, complete cds Length = 2994 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 1285 ccttaaccagctcttcattg 1266
>dbj|AK053035.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930027G22 product:hypothetical protein, full insert sequence Length = 1983 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 215 ccttaaccagctcttcattg 196
>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence Length = 198706 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ccatctgaccttctcttcca 380 |||||||||||||||||||| Sbjct: 68084 ccatctgaccttctcttcca 68065
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cgaccttcgccgccgtcacc 322 |||||||||||||||||||| Sbjct: 1777059 cgaccttcgccgccgtcacc 1777078
>gb|AC096711.2| Homo sapiens BAC clone RP11-1E22 from 4, complete sequence Length = 141037 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aatttatgtaaaataatata 108 |||||||||||||||||||| Sbjct: 82849 aatttatgtaaaataatata 82868
>gb|AC018802.8| Homo sapiens BAC clone RP11-315L16 from 2, complete sequence Length = 123993 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 aaataatataattaactcagaaat 122 |||||||||| ||||||||||||| Sbjct: 43530 aaataatatatttaactcagaaat 43507
>gb|AC108146.3| Homo sapiens BAC clone RP11-437H3 from 2, complete sequence Length = 91810 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ataattaactcagaaataaa 125 |||||||||||||||||||| Sbjct: 29270 ataattaactcagaaataaa 29251
>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 201467 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 aataatataattaactcagaaataaacc 127 |||||||||||||| ||||||| ||||| Sbjct: 68163 aataatataattaaatcagaaaaaaacc 68190
>gb|AY149907.1| Mus musculus mind bomb (Mib) mRNA, complete cds Length = 3021 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccttaaccagctcttcattg 409 |||||||||||||||||||| Sbjct: 1312 ccttaaccagctcttcattg 1293
>gb|AC130303.8| Homo sapiens chromosome 11, clone RP4-539G11, complete sequence Length = 171366 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ataattaactcagaaataaa 125 |||||||||||||||||||| Sbjct: 77448 ataattaactcagaaataaa 77429
>emb|BX005069.9| Zebrafish DNA sequence from clone CH211-132P1 in linkage group 14, complete sequence Length = 166320 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atgtaaaataatataattaa 113 |||||||||||||||||||| Sbjct: 62995 atgtaaaataatataattaa 62976
>dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H05, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 7.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 441 cctccactatgtgcaccttgttcaccctctgctccgcgtacagcggccagca 492 ||||||| ||| ||||| |||||| | |||||||| ||| ||||||||||| Sbjct: 907 cctccaccatgagcaccctgttcatcgcctgctccgtgtaaagcggccagca 856
>gb|AC102854.12| Mus musculus chromosome 3, clone RP24-493E20, complete sequence Length = 133271 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ccatctgaccttctcttcca 380 |||||||||||||||||||| Sbjct: 47860 ccatctgaccttctcttcca 47879
>emb|BX088644.9| Zebrafish DNA sequence from clone CH211-157L15 in linkage group 20, complete sequence Length = 175570 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 caatttaagataacttatacacat 60 |||||||| ||||||||||||||| Sbjct: 172942 caatttaaaataacttatacacat 172919
>gb|AE003826.4| Drosophila melanogaster chromosome 2R, section 24 of 73 of the complete sequence Length = 310108 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atgtaaaataatataattaa 113 |||||||||||||||||||| Sbjct: 249562 atgtaaaataatataattaa 249543
>emb|AJ744850.1| Streptomyces ribosidificus ribostamycin biosynthesis gene cluster, strain NRRL B-11466 Length = 43190 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 tcgccgccgtcacccgctcc 328 |||||||||||||||||||| Sbjct: 18305 tcgccgccgtcacccgctcc 18324
>emb|AL929330.14| Zebrafish DNA sequence from clone CH211-26A17, complete sequence Length = 176635 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aaatttatgtaaaataatataatt 111 |||||||| ||||||||||||||| Sbjct: 160352 aaatttatataaaataatataatt 160329
>gb|AC146688.1| Gallus gallus BAC clone CH261-24P18 from chromosome unknown, complete sequence Length = 212571 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 acaaatttatgtaaaataat 105 |||||||||||||||||||| Sbjct: 161449 acaaatttatgtaaaataat 161468
>emb|AL929344.8| Zebrafish DNA sequence from clone DKEYP-115D2, complete sequence Length = 190898 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aaatttatgtaaaataatataatt 111 |||||||| ||||||||||||||| Sbjct: 68928 aaatttatataaaataatataatt 68905
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete sequence Length = 151891 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 atgtgcaccttgttcaccct 468 |||||||||||||||||||| Sbjct: 49591 atgtgcaccttgttcaccct 49610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,656,147 Number of Sequences: 3902068 Number of extensions: 4656147 Number of successful extensions: 140816 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 140028 Number of HSP's gapped (non-prelim): 788 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
