ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (... 36 0.098
2DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300 35 0.17
3RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RG... 32 1.4
4DRL11_ARATH (Q94HW3) Probable disease resistance protein RDL6/RF9 31 3.2
5DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460 31 3.2
6Y396_HELPJ (Q9ZKF3) Hypothetical protein jhp_0985 30 4.1
7DRL42_ARATH (Q9FKZ1) Probable disease resistance protein At5g66900 30 7.0
8DRL39_ARATH (Q9LVT1) Putative disease resistance protein At5g47280 29 9.2
9Y924_HELPY (O25581) Probable tautomerase HP0924 (EC 5.3.2.-) 29 9.2
10Y858_HELPJ (Q9ZKS7) Probable tautomerase jhp_0858 (EC 5.3.2.-) 29 9.2
11TMVRN_NICGU (Q40392) TMV resistance protein N 29 9.2

>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight|
            resistance protein RPI)
          Length = 970

 Score = 35.8 bits (81), Expect = 0.098
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = -1

Query: 603  AQLASLKILRIWKFPAIRSLPKDGLP--SSLQELDIKDCPAIKSLPKDGLP--SSLRKLE 436
            A L +LK L+I    A+ SLP++GL   SSL EL ++ C  +K LP +GL   ++L  L+
Sbjct: 880  ASLNALKSLKIQLCCALESLPEEGLEGLSSLTELFVEHCNMLKCLP-EGLQHLTTLTSLK 938

Query: 435  VCGGISEELKRQCCK 391
            + G    +L ++C K
Sbjct: 939  IRG--CPQLIKRCEK 951



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
 Frame = -1

Query: 597  LASLKILRIWKFPAIRSLPKD-GLPSSLQELDIKDCPAIKSLPKDGLP--SSLRKLEV 433
            LA+LK L I +   ++ LP      ++L+ L I+ C A++SLP++GL   SSL +L V
Sbjct: 858  LANLKYLTISRCNNLKELPTSLASLNALKSLKIQLCCALESLPEEGLEGLSSLTELFV 915



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>DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300|
          Length = 832

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = -1

Query: 603 AQLASLKILRIWKFPAIRSLPKD--GLPSSLQELDIKDCPAIKSLPKD-GLPSSLRKLEV 433
           ++L +L+ILR++  P +++LP +   LP  L+ LDI  C ++  LP++ G    L K+++
Sbjct: 717 SKLQALEILRLYACPELKTLPGEICELP-GLKYLDISQCVSLSCLPEEIGKLKKLEKIDM 775

Query: 432 CGGISEELKRQCC 394
                    R+CC
Sbjct: 776 ---------RECC 779



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>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)|
          Length = 1025

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
 Frame = -1

Query: 597  LASLKILRIWKFPAIRSLPKD-GLPSSLQELDIKDCPAIKSLPKDGLP--SSLRKLEV 433
            LA+LK L+I  F  ++ LP      ++L+ L  + C A++SLP++G+   +SL +L V
Sbjct: 913  LANLKYLKISFFRNLKELPTSLASLNALKSLKFEFCDALESLPEEGVKGLTSLTELSV 970



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>DRL11_ARATH (Q94HW3) Probable disease resistance protein RDL6/RF9|
          Length = 1049

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 519 LQELDIKDCPAIKSLPKDGLPSSLRKLEV 433
           L  LDI+DC  +K LP + LPS L  + +
Sbjct: 852 LHTLDIRDCRKLKQLPDEHLPSHLTSISL 880



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>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460|
          Length = 1424

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = -1

Query: 522  SLQELDIKDCPAIKSLPKDGLPS 454
            +L+ L+I+DCP +++ P+ GLP+
Sbjct: 1216 ALESLEIRDCPNLETFPQGGLPT 1238



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = -1

Query: 591 SLKILRIWKFPA----IRSLPKDGLPSSLQELDIKDCPAIKSLPKDGLPSS 451
           SL+IL+ +  P     I    +DG+   LQ+L I+ CP+++    +GLPSS
Sbjct: 841 SLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLRKKFPEGLPSS 891



 Score = 30.4 bits (67), Expect = 4.1
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 25/76 (32%)
 Frame = -1

Query: 591  SLKILRIWKFPAIRSLPKDGLPS-------------------------SLQELDIKDCPA 487
            +L+ L I   P + + P+ GLP+                         SL  L I  CP 
Sbjct: 1216 ALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPE 1275

Query: 486  IKSLPKDGLPSSLRKL 439
            I+++P  G PS+LR L
Sbjct: 1276 IETIPGGGFPSNLRTL 1291



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>Y396_HELPJ (Q9ZKF3) Hypothetical protein jhp_0985|
          Length = 616

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
 Frame = -1

Query: 591 SLKILR-IWK----FPAIRSLPKDGLPSSLQELDIKDCPAIKSLPKDG 463
           SLKIL+ +W     FP   + PKD +    +E+++ D P +K+  KDG
Sbjct: 105 SLKILKDLWDLRHVFPKKTARPKDLITKQDKEVNLWDLPVLKTWEKDG 152



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>DRL42_ARATH (Q9FKZ1) Probable disease resistance protein At5g66900|
          Length = 809

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = -1

Query: 597 LASLKILRIWKFPAIRSLPK--DGLPSSLQELDIKDCPAIKSLPKD-GLPSSLRKLEV-- 433
           L+ L++LR+     +  LP+  +GL S+L+ LDI  C  ++ LP++ G   +L+K+ +  
Sbjct: 696 LSRLEVLRLCSSMNLSELPEATEGL-SNLRFLDISHCLGLRKLPQEIGKLQNLKKISMRK 754

Query: 432 CGG 424
           C G
Sbjct: 755 CSG 757



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>DRL39_ARATH (Q9LVT1) Putative disease resistance protein At5g47280|
          Length = 623

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -1

Query: 597 LASLKILRIWKFPAIRSLPKD-GLPSSLQELDIKDCPAIKSLP 472
           + SL  + I   P I+ LPK+     +LQ L +  CP +KSLP
Sbjct: 486 ITSLNSISITNCPNIKELPKNISKLQALQLLRLYACPELKSLP 528



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>Y924_HELPY (O25581) Probable tautomerase HP0924 (EC 5.3.2.-)|
          Length = 67

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/42 (33%), Positives = 28/42 (66%)
 Frame = -1

Query: 486 IKSLPKDGLPSSLRKLEVCGGISEELKRQCCKLKGTIPIIID 361
           IK +P++G P++ +K ++  G+S+ + +   K K +I +IID
Sbjct: 5   IKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIID 46



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>Y858_HELPJ (Q9ZKS7) Probable tautomerase jhp_0858 (EC 5.3.2.-)|
          Length = 67

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/42 (33%), Positives = 28/42 (66%)
 Frame = -1

Query: 486 IKSLPKDGLPSSLRKLEVCGGISEELKRQCCKLKGTIPIIID 361
           IK +P++G P++ +K ++  G+S+ + +   K K +I +IID
Sbjct: 5   IKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIID 46



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>TMVRN_NICGU (Q40392) TMV resistance protein N|
          Length = 1144

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
 Frame = -1

Query: 531 LPSS------LQELDIKDCPAIKSLPKDGLPSSLRKLEV 433
           LPSS      LQ LD+KDC  +  LP+  LP  L +L V
Sbjct: 873 LPSSIAQLGALQSLDLKDCQRLTQLPE--LPPELNELHV 909


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,590,199
Number of Sequences: 219361
Number of extensions: 1693776
Number of successful extensions: 4924
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4921
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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