Clone Name | rbah61g23 |
---|---|
Clone Library Name | barley_pub |
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 531 bits (268), Expect = e-147 Identities = 301/312 (96%) Strand = Plus / Plus Query: 1 atgtttataaacatgcacatacattgaacgcaagttgacaaacaaattaacctagaggaa 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135011 atgtttataaacatgcacatacgttgaacgcaagttgacaaacaaattaacctagaggaa 135070 Query: 61 gcatagttttgaccatcttaacaatcatctagaacacacaagtcacaaaaagataaggac 120 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135071 gcatagttttgagcatgttaacaatcatctagaacacacaagtcacaaaaagataaggac 135130 Query: 121 tattggttactatgagagacttcagatggtccagaaaacataagtttgtatctacatgca 180 |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 135131 tattggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgca 135190 Query: 181 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaatatggtctat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 135191 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccat 135250 Query: 241 gattacacgttgattggtccataaacgctagagagtcatcatgtccatgtgcatcaatag 300 ||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135251 gattacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaatag 135310 Query: 301 gttgagtacctg 312 |||||||||||| Sbjct: 135311 gttgagtacctg 135322 Score = 531 bits (268), Expect = e-147 Identities = 301/312 (96%) Strand = Plus / Plus Query: 1 atgtttataaacatgcacatacattgaacgcaagttgacaaacaaattaacctagaggaa 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95298 atgtttataaacatgcacatacgttgaacgcaagttgacaaacaaattaacctagaggaa 95357 Query: 61 gcatagttttgaccatcttaacaatcatctagaacacacaagtcacaaaaagataaggac 120 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95358 gcatagttttgagcatgttaacaatcatctagaacacacaagtcacaaaaagataaggac 95417 Query: 121 tattggttactatgagagacttcagatggtccagaaaacataagtttgtatctacatgca 180 |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 95418 tattggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgca 95477 Query: 181 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaatatggtctat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 95478 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccat 95537 Query: 241 gattacacgttgattggtccataaacgctagagagtcatcatgtccatgtgcatcaatag 300 ||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95538 gattacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaatag 95597 Query: 301 gttgagtacctg 312 |||||||||||| Sbjct: 95598 gttgagtacctg 95609
>ref|XM_468178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1801 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Minus Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405 ||||||| ||||| ||||||||| ||||||||||||| ||| |||||||||||||||||| Sbjct: 729 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccccatccaaatg 670 Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465 |||| || || ||||||||||| |||||||| ||||| | |||||| |||||||||| | Sbjct: 669 atctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtggaactggttctc 610 Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525 ||||| || ||| ||| ||| |||||| |||| ||| |||||||| ||||||||||| | Sbjct: 609 ttttcaacctataaagatctgtgagacagccaagtacccaaccaactgtgccatcaccac 550 Query: 526 cagcaaccataatcc 540 ||||||||||||||| Sbjct: 549 cagcaaccataatcc 535
>dbj|AK065676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I11, full insert sequence Length = 1802 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Minus Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405 ||||||| ||||| ||||||||| ||||||||||||| ||| |||||||||||||||||| Sbjct: 729 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccccatccaaatg 670 Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465 |||| || || ||||||||||| |||||||| ||||| | |||||| |||||||||| | Sbjct: 669 atctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtggaactggttctc 610 Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525 ||||| || ||| ||| ||| |||||| |||| ||| |||||||| ||||||||||| | Sbjct: 609 ttttcaacctataaagatctgtgagacagccaagtacccaaccaactgtgccatcaccac 550 Query: 526 cagcaaccataatcc 540 ||||||||||||||| Sbjct: 549 cagcaaccataatcc 535
>gb|AY108203.1| Zea mays PCO088982 mRNA sequence Length = 1447 Score = 172 bits (87), Expect = 1e-39 Identities = 168/195 (86%) Strand = Plus / Minus Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405 ||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||| | Sbjct: 243 tgagataacgctttacagctgagcgccaaccaaagggaaaagagccaccccatccaaacg 184 Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465 ||||||| || ||||||||||| |||||||||||||||| ||| || ||||| |||| || Sbjct: 183 atctagcaagatcatttcctgtaccaagtggaatgattcctgtaggtggaaccggttccc 124 Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525 ||||| ||||| ||| ||| ||||||||||| || |||||||| || |||||||| | Sbjct: 123 ttttcatcttataaagatctgagagacatccaagcacccaaccaactgtaccatcacccc 64 Query: 526 cagcaaccataatcc 540 ||||||||| ||||| Sbjct: 63 cagcaaccacaatcc 49
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 394 cccatccaaatgatctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggag 453 |||||||||||||||| || || ||||||||||| |||||||| ||||| | |||||| | Sbjct: 33500366 cccatccaaatgatctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtg 33500425 Query: 454 gaactggtttccttttcgacttattaagttcttggagacatccaaatactcaaccaacag 513 ||||||||| |||||| || ||| ||| ||| |||||| |||| ||| |||||||| | Sbjct: 33500426 gaactggttctcttttcaacctataaagatctgtgagacagccaagtacccaaccaactg 33500485 Query: 514 tgccatcacctccagcaacc 533 |||||||||| ||||||||| Sbjct: 33500486 tgccatcaccaccagcaacc 33500505 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccc 395 ||||||| ||||| ||||||||| ||||||||||||| ||| |||||||| Sbjct: 33500193 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccc 33500242
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 394 cccatccaaatgatctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggag 453 |||||||||||||||| || || ||||||||||| |||||||| ||||| | |||||| | Sbjct: 75241 cccatccaaatgatctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtg 75300 Query: 454 gaactggtttccttttcgacttattaagttcttggagacatccaaatactcaaccaacag 513 ||||||||| |||||| || ||| ||| ||| |||||| |||| ||| |||||||| | Sbjct: 75301 gaactggttctcttttcaacctataaagatctgtgagacagccaagtacccaaccaactg 75360 Query: 514 tgccatcacctccagcaacc 533 |||||||||| ||||||||| Sbjct: 75361 tgccatcaccaccagcaacc 75380 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccc 395 ||||||| ||||| ||||||||| ||||||||||||| ||| |||||||| Sbjct: 75068 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccc 75117
>ref|NM_179649.2| Arabidopsis thaliana diacylglycerol kinase AT2G18730 mRNA, complete cds Length = 1845 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 673 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 622
>gb|AY141990.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds Length = 1467 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 527 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 476
>gb|AY064982.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds Length = 1785 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 616 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 565
>emb|BX820590.1|CNS0A8R4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1742 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 614 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 563
>emb|BX820215.1|CNS0A8F8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1665 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 673 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 622
>emb|BX819738.1|CNS0A8G9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1817 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 658 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 607
>emb|BX819736.1|CNS0A8FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1828 Score = 63.9 bits (32), Expect = 7e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540 |||||||||| || ||||||||||| ||||||||||| ||||||||||||| Sbjct: 672 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 621
>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete sequence Length = 88413 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaacc 533 |||||||||| || ||||||||||| ||||||||||| |||||| Sbjct: 39786 agacatccaagaacccaaccaacagtaccatcacctcctgcaacc 39742
>gb|BT009566.1| Triticum aestivum clone wre1n.pk0015.d10:fis, full insert mRNA sequence Length = 1078 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 689 cttaatgttgtccagtgatatttcacc 715 ||||||| ||||||||||||||||||| Sbjct: 362 cttaatggtgtccagtgatatttcacc 336
>emb|AL049554.2|HSJ514B11 Human DNA sequence from clone RP3-514B11 on chromosome 6q16.1-21, complete sequence Length = 100494 Score = 44.1 bits (22), Expect = 0.64 Identities = 25/26 (96%) Strand = Plus / Plus Query: 368 atgccaaccaaaggggaaaaagccac 393 ||||||| |||||||||||||||||| Sbjct: 80621 atgccaagcaaaggggaaaaagccac 80646
>gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete sequence Length = 113505 Score = 42.1 bits (21), Expect = 2.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaacc 533 |||||||| || || || ||||| || |||||||||||||||||| Sbjct: 50473 agacatcctaacacccagccaactgtaccatcacctccagcaacc 50429 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 tcatttcctgtcccaagtgg 436 |||||||||||||||||||| Sbjct: 50545 tcatttcctgtcccaagtgg 50526
>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174616 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 caaaacactcgaaacaccaaa 215 ||||||||||||||||||||| Sbjct: 16971 caaaacactcgaaacaccaaa 16991
>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170356 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 caaaacactcgaaacaccaaa 215 ||||||||||||||||||||| Sbjct: 135455 caaaacactcgaaacaccaaa 135475
>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence Length = 203241 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 tgtatctacatgcacaaagtg 187 ||||||||||||||||||||| Sbjct: 83660 tgtatctacatgcacaaagtg 83680
>gb|AF173561.1|AF173561 Ortalis guttata 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial genes for mitochondrial products Length = 2669 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 593 ctccaaacaacccaggccata 613 ||||||||||||||||||||| Sbjct: 2229 ctccaaacaacccaggccata 2249
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 610 catagcgaacaaaattagaac 630 ||||||||||||||||||||| Sbjct: 1468519 catagcgaacaaaattagaac 1468539
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete sequence Length = 244140 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 caaaacactcgaaacaccaaa 215 ||||||||||||||||||||| Sbjct: 146740 caaaacactcgaaacaccaaa 146760
>gb|CP000226.1| Drosophila melanogaster genomic scaffold 211000022280776 Length = 277780 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 agtgcaagctccaaaacactc 204 ||||||||||||||||||||| Sbjct: 88698 agtgcaagctccaaaacactc 88718
>ref|XM_480995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 tcatttcctgtcccaagtgg 436 |||||||||||||||||||| Sbjct: 713 tcatttcctgtcccaagtgg 694
>gb|AE008590.1| Rickettsia conorii str. Malish 7, section 22 of 114 of the complete genome Length = 12509 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aattaacctagaggaagcat 64 |||||||||||||||||||| Sbjct: 8416 aattaacctagaggaagcat 8397
>gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome 1, complete sequence Length = 231896 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aaagtgcaagctccaaaaca 201 |||||||||||||||||||| Sbjct: 150469 aaagtgcaagctccaaaaca 150488
>ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (293.t00010) partial mRNA Length = 1887 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 agagtcatcatgtccatgtgcatcaata 299 |||| |||| |||||||||||||||||| Sbjct: 1563 agagacatcttgtccatgtgcatcaata 1536
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 aattaacctagaggaagcat 64 |||||||||||||||||||| Sbjct: 1152626 aattaacctagaggaagcat 1152645
>gb|BC109524.1| Bos taurus similar to ornithine decarboxylase-like protein, mRNA (cDNA clone MGC:134604 IMAGE:8052844), complete cds Length = 2191 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tcttgtgggaggaactggtttcct 466 ||||| |||||||||||||||||| Sbjct: 1495 tcttgggggaggaactggtttcct 1472
>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2 novel genes, complete sequence Length = 144792 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 agatggtccagaaaacataa 163 |||||||||||||||||||| Sbjct: 107530 agatggtccagaaaacataa 107511
>emb|AL136443.11| Human DNA sequence from clone RP3-342H9 on chromosome 6 Contains a CpG island, complete sequence Length = 74354 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 acatccaaatactcaaccaacagt 514 ||||||||| |||||||||||||| Sbjct: 1355 acatccaaagactcaaccaacagt 1332
>emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chromosome 13 Contains part of a novel gene (6620401C13Rik), complete sequence Length = 199848 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 atttcctgtcccaagtggaa 438 |||||||||||||||||||| Sbjct: 4310 atttcctgtcccaagtggaa 4329
>emb|BX537166.6| Zebrafish DNA sequence from clone DKEY-218I12 in linkage group 16, complete sequence Length = 60424 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 cataagtttgtatctacatgcaca 182 ||||||||||||| |||||||||| Sbjct: 40988 cataagtttgtatgtacatgcaca 40965
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atgtttataaacatgcacat 20 |||||||||||||||||||| Sbjct: 16239 atgtttataaacatgcacat 16258
>dbj|AK029761.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930534E01 product:unclassifiable, full insert sequence Length = 3301 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 aatcatctagaacacacaagtcacaaaa 110 |||||| ||||||||| ||||||||||| Sbjct: 2970 aatcatttagaacacaaaagtcacaaaa 2997
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcatttcctgtcccaagtgg 436 |||||||||||||||||||| Sbjct: 9126315 tcatttcctgtcccaagtgg 9126334
>ref|XM_395220.2| PREDICTED: Apis mellifera similar to ENSANGP00000006622 (LOC411753), mRNA Length = 2904 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tattggttactatgagagac 140 |||||||||||||||||||| Sbjct: 944 tattggttactatgagagac 963
>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence Length = 188873 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 acagtgccatcacctccagc 529 |||||||||||||||||||| Sbjct: 79541 acagtgccatcacctccagc 79560
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcatttcctgtcccaagtgg 436 |||||||||||||||||||| Sbjct: 136625 tcatttcctgtcccaagtgg 136644
>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence Length = 207983 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 caaaaagataaggactattg 125 |||||||||||||||||||| Sbjct: 158928 caaaaagataaggactattg 158909
>dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated polyketone reductase C1, complete cds Length = 1480 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aaaacactcgaaacaccaaa 215 |||||||||||||||||||| Sbjct: 633 aaaacactcgaaacaccaaa 652
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcatttcctgtcccaagtgg 436 |||||||||||||||||||| Sbjct: 61809 tcatttcctgtcccaagtgg 61828
>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete sequence Length = 271869 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atgtttataaacatgcacat 20 |||||||||||||||||||| Sbjct: 5044 atgtttataaacatgcacat 5025
>ref|NM_001038510.1| Bos taurus similar to ornithine decarboxylase-like protein (MGC134604), mRNA Length = 2191 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tcttgtgggaggaactggtttcct 466 ||||| |||||||||||||||||| Sbjct: 1495 tcttgggggaggaactggtttcct 1472
>gb|AC140349.4| Mus musculus BAC clone RP24-250I16 from 12, complete sequence Length = 177344 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 aaagataaggactattggttacta 132 ||||| |||||||||||||||||| Sbjct: 20258 aaagagaaggactattggttacta 20235
>gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, complete sequence Length = 182060 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 aaagataaggactattggttacta 132 ||||| |||||||||||||||||| Sbjct: 153522 aaagagaaggactattggttacta 153499
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 acttcagatggtccagaaaa 158 |||||||||||||||||||| Sbjct: 2725479 acttcagatggtccagaaaa 2725498
>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete sequence Length = 206914 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 aatcatctagaacacacaagtcacaaaa 110 |||||| ||||||||| ||||||||||| Sbjct: 46303 aatcatttagaacacaaaagtcacaaaa 46330 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,687,960 Number of Sequences: 3902068 Number of extensions: 6687960 Number of successful extensions: 163212 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 162964 Number of HSP's gapped (non-prelim): 248 length of query: 729 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 706 effective length of database: 17,143,297,704 effective search space: 12103168179024 effective search space used: 12103168179024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)