ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 531 e-147
2ref|XM_468178.1| Oryza sativa (japonica cultivar-group), mRNA 180 4e-42
3dbj|AK065676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
4gb|AY108203.1| Zea mays PCO088982 mRNA sequence 172 1e-39
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
6dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
7ref|NM_179649.2| Arabidopsis thaliana diacylglycerol kinase AT2G... 64 7e-07
8gb|AY141990.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, comp... 64 7e-07
9gb|AY064982.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, comp... 64 7e-07
10emb|BX820590.1|CNS0A8R4 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
11emb|BX820215.1|CNS0A8F8 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
12emb|BX819738.1|CNS0A8G9 Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
13emb|BX819736.1|CNS0A8FK Arabidopsis thaliana Full-length cDNA Co... 64 7e-07
14gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map ... 50 0.010
15gb|BT009566.1| Triticum aestivum clone wre1n.pk0015.d10:fis, ful... 46 0.16
16emb|AL049554.2|HSJ514B11 Human DNA sequence from clone RP3-514B1... 44 0.64
17gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete seq... 42 2.5
18gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswel... 42 2.5
19gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswel... 42 2.5
20gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, comple... 42 2.5
21gb|AF173561.1|AF173561 Ortalis guttata 12S ribosomal RNA gene, p... 42 2.5
22emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 42 2.5
23gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37... 42 2.5
24gb|CP000226.1| Drosophila melanogaster genomic scaffold 21100002... 42 2.5
25ref|XM_480995.1| Oryza sativa (japonica cultivar-group), mRNA 40 10.0
26gb|AE008590.1| Rickettsia conorii str. Malish 7, section 22 of 1... 40 10.0
27gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome ... 40 10.0
28ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (29... 40 10.0
29gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 10.0
30gb|BC109524.1| Bos taurus similar to ornithine decarboxylase-lik... 40 10.0
31emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chro... 40 10.0
32emb|AL136443.11| Human DNA sequence from clone RP3-342H9 on chro... 40 10.0
33emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chro... 40 10.0
34emb|BX537166.6| Zebrafish DNA sequence from clone DKEY-218I12 in... 40 10.0
35gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswel... 40 10.0
36dbj|AK029761.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 10.0
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
38ref|XM_395220.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 10.0
39gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, comp... 40 10.0
40dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
41gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, compl... 40 10.0
42dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated ... 40 10.0
43dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
44gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 40 10.0
45ref|NM_001038510.1| Bos taurus similar to ornithine decarboxylas... 40 10.0
46gb|AC140349.4| Mus musculus BAC clone RP24-250I16 from 12, compl... 40 10.0
47gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, compl... 40 10.0
48emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 10.0
49emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chr... 40 10.0 
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  531 bits (268), Expect = e-147
 Identities = 301/312 (96%)
 Strand = Plus / Plus

                                                                          
Query: 1      atgtttataaacatgcacatacattgaacgcaagttgacaaacaaattaacctagaggaa 60
              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 135011 atgtttataaacatgcacatacgttgaacgcaagttgacaaacaaattaacctagaggaa 135070

                                                                          
Query: 61     gcatagttttgaccatcttaacaatcatctagaacacacaagtcacaaaaagataaggac 120
              |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135071 gcatagttttgagcatgttaacaatcatctagaacacacaagtcacaaaaagataaggac 135130

                                                                          
Query: 121    tattggttactatgagagacttcagatggtccagaaaacataagtttgtatctacatgca 180
              |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 135131 tattggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgca 135190

                                                                          
Query: 181    caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaatatggtctat 240
              |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 135191 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccat 135250

                                                                          
Query: 241    gattacacgttgattggtccataaacgctagagagtcatcatgtccatgtgcatcaatag 300
              ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135251 gattacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaatag 135310

                          
Query: 301    gttgagtacctg 312
              ||||||||||||
Sbjct: 135311 gttgagtacctg 135322



 Score =  531 bits (268), Expect = e-147
 Identities = 301/312 (96%)
 Strand = Plus / Plus

                                                                         
Query: 1     atgtttataaacatgcacatacattgaacgcaagttgacaaacaaattaacctagaggaa 60
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 95298 atgtttataaacatgcacatacgttgaacgcaagttgacaaacaaattaacctagaggaa 95357

                                                                         
Query: 61    gcatagttttgaccatcttaacaatcatctagaacacacaagtcacaaaaagataaggac 120
             |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95358 gcatagttttgagcatgttaacaatcatctagaacacacaagtcacaaaaagataaggac 95417

                                                                         
Query: 121   tattggttactatgagagacttcagatggtccagaaaacataagtttgtatctacatgca 180
             |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 95418 tattggttactacgagagacttcagatggtccagaacacacaagtttgtatctacatgca 95477

                                                                         
Query: 181   caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaatatggtctat 240
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 95478 caaagtgcaagctccaaaacactcgaaacaccaaatggtctacaagacaataaggtccat 95537

                                                                         
Query: 241   gattacacgttgattggtccataaacgctagagagtcatcatgtccatgtgcatcaatag 300
             ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 95538 gattacaggttggttggtccataaacgctggagagtcatcatgtccatgtgcatcaatag 95597

                         
Query: 301   gttgagtacctg 312
             ||||||||||||
Sbjct: 95598 gttgagtacctg 95609
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>ref|XM_468178.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1801

 Score =  180 bits (91), Expect = 4e-42
 Identities = 169/195 (86%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405
           ||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||
Sbjct: 729 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccccatccaaatg 670

                                                                       
Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465
           |||| || || ||||||||||| |||||||| ||||| | |||||| ||||||||||  |
Sbjct: 669 atctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtggaactggttctc 610

                                                                       
Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525
           ||||| || ||| ||| |||  |||||| |||| ||| |||||||| ||||||||||| |
Sbjct: 609 ttttcaacctataaagatctgtgagacagccaagtacccaaccaactgtgccatcaccac 550

                          
Query: 526 cagcaaccataatcc 540
           |||||||||||||||
Sbjct: 549 cagcaaccataatcc 535
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>dbj|AK065676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036I11, full
           insert sequence
          Length = 1802

 Score =  180 bits (91), Expect = 4e-42
 Identities = 169/195 (86%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405
           ||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||
Sbjct: 729 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccccatccaaatg 670

                                                                       
Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465
           |||| || || ||||||||||| |||||||| ||||| | |||||| ||||||||||  |
Sbjct: 669 atctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtggaactggttctc 610

                                                                       
Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525
           ||||| || ||| ||| |||  |||||| |||| ||| |||||||| ||||||||||| |
Sbjct: 609 ttttcaacctataaagatctgtgagacagccaagtacccaaccaactgtgccatcaccac 550

                          
Query: 526 cagcaaccataatcc 540
           |||||||||||||||
Sbjct: 549 cagcaaccataatcc 535
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>gb|AY108203.1| Zea mays PCO088982 mRNA sequence
          Length = 1447

 Score =  172 bits (87), Expect = 1e-39
 Identities = 168/195 (86%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccccatccaaatg 405
           ||||||| ||||||||||||||  ||||||||||||| ||| |||||||||||||||| |
Sbjct: 243 tgagataacgctttacagctgagcgccaaccaaagggaaaagagccaccccatccaaacg 184

                                                                       
Query: 406 atctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggaggaactggtttcc 465
           ||||||| || ||||||||||| |||||||||||||||| ||| || ||||| |||| ||
Sbjct: 183 atctagcaagatcatttcctgtaccaagtggaatgattcctgtaggtggaaccggttccc 124

                                                                       
Query: 466 ttttcgacttattaagttcttggagacatccaaatactcaaccaacagtgccatcacctc 525
           |||||  ||||| ||| |||  |||||||||||  || |||||||| || |||||||| |
Sbjct: 123 ttttcatcttataaagatctgagagacatccaagcacccaaccaactgtaccatcacccc 64

                          
Query: 526 cagcaaccataatcc 540
           ||||||||| |||||
Sbjct: 63  cagcaaccacaatcc 49
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  111 bits (56), Expect = 3e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                            
Query: 394      cccatccaaatgatctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggag 453
                |||||||||||||||| || || ||||||||||| |||||||| ||||| | |||||| |
Sbjct: 33500366 cccatccaaatgatctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtg 33500425

                                                                            
Query: 454      gaactggtttccttttcgacttattaagttcttggagacatccaaatactcaaccaacag 513
                |||||||||  |||||| || ||| ||| |||  |||||| |||| ||| |||||||| |
Sbjct: 33500426 gaactggttctcttttcaacctataaagatctgtgagacagccaagtacccaaccaactg 33500485

                                    
Query: 514      tgccatcacctccagcaacc 533
                |||||||||| |||||||||
Sbjct: 33500486 tgccatcaccaccagcaacc 33500505



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                  
Query: 346      tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccc 395
                ||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||
Sbjct: 33500193 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccc 33500242
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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score =  111 bits (56), Expect = 3e-21
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                         
Query: 394   cccatccaaatgatctagcgaggtcatttcctgtcccaagtggaatgattcttgtgggag 453
             |||||||||||||||| || || ||||||||||| |||||||| ||||| | |||||| |
Sbjct: 75241 cccatccaaatgatctggcaagatcatttcctgtaccaagtgggatgatacctgtgggtg 75300

                                                                         
Query: 454   gaactggtttccttttcgacttattaagttcttggagacatccaaatactcaaccaacag 513
             |||||||||  |||||| || ||| ||| |||  |||||| |||| ||| |||||||| |
Sbjct: 75301 gaactggttctcttttcaacctataaagatctgtgagacagccaagtacccaaccaactg 75360

                                 
Query: 514   tgccatcacctccagcaacc 533
             |||||||||| |||||||||
Sbjct: 75361 tgccatcaccaccagcaacc 75380



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 346   tgagatatcgctttacagctgaatgccaaccaaaggggaaaaagccaccc 395
             ||||||| ||||| ||||||||| ||||||||||||| ||| ||||||||
Sbjct: 75068 tgagataacgcttcacagctgaacgccaaccaaagggaaaagagccaccc 75117
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>ref|NM_179649.2| Arabidopsis thaliana diacylglycerol kinase AT2G18730 mRNA, complete
           cds
          Length = 1845

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 673 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 622
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>gb|AY141990.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds
          Length = 1467

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 527 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 476
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>gb|AY064982.1| Arabidopsis thaliana At2g18730/MSF3.11 mRNA, complete cds
          Length = 1785

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 616 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 565
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>emb|BX820590.1|CNS0A8R4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH50ZC07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1742

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 614 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 563
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>emb|BX820215.1|CNS0A8F8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS93ZG01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1665

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 673 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 622
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>emb|BX819738.1|CNS0A8G9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS21ZD10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1817

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 658 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 607
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>emb|BX819736.1|CNS0A8FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS21ZC10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1828

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 489 agacatccaaatactcaaccaacagtgccatcacctccagcaaccataatcc 540
           ||||||||||  || ||||||||||| ||||||||||| |||||||||||||
Sbjct: 672 agacatccaagaacccaaccaacagtaccatcacctcctgcaaccataatcc 621
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>gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map CIC06E08, complete
             sequence
          Length = 88413

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 489   agacatccaaatactcaaccaacagtgccatcacctccagcaacc 533
             ||||||||||  || ||||||||||| ||||||||||| ||||||
Sbjct: 39786 agacatccaagaacccaaccaacagtaccatcacctcctgcaacc 39742
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>gb|BT009566.1| Triticum aestivum clone wre1n.pk0015.d10:fis, full insert mRNA
           sequence
          Length = 1078

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 689 cttaatgttgtccagtgatatttcacc 715
           ||||||| |||||||||||||||||||
Sbjct: 362 cttaatggtgtccagtgatatttcacc 336
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>emb|AL049554.2|HSJ514B11 Human DNA sequence from clone RP3-514B11 on chromosome 6q16.1-21,
             complete sequence
          Length = 100494

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 368   atgccaaccaaaggggaaaaagccac 393
             ||||||| ||||||||||||||||||
Sbjct: 80621 atgccaagcaaaggggaaaaagccac 80646
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>gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete sequence
          Length = 113505

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 489   agacatccaaatactcaaccaacagtgccatcacctccagcaacc 533
             |||||||| || || || ||||| || ||||||||||||||||||
Sbjct: 50473 agacatcctaacacccagccaactgtaccatcacctccagcaacc 50429



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   tcatttcctgtcccaagtgg 436
             ||||||||||||||||||||
Sbjct: 50545 tcatttcctgtcccaagtgg 50526
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>gb|AC010016.6| Drosophila melanogaster 3L BAC RP98-10M10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 174616

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   caaaacactcgaaacaccaaa 215
             |||||||||||||||||||||
Sbjct: 16971 caaaacactcgaaacaccaaa 16991
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>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170356

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    caaaacactcgaaacaccaaa 215
              |||||||||||||||||||||
Sbjct: 135455 caaaacactcgaaacaccaaa 135475
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>gb|AC008282.4| Homo sapiens BAC clone RP11-516B14 from 2, complete sequence
          Length = 203241

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   tgtatctacatgcacaaagtg 187
             |||||||||||||||||||||
Sbjct: 83660 tgtatctacatgcacaaagtg 83680
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>gb|AF173561.1|AF173561 Ortalis guttata 12S ribosomal RNA gene, partial sequence; tRNA-Val
            gene, complete sequence; 16S ribosomal RNA gene, complete
            sequence; and tRNA-Leu gene, partial sequence;
            mitochondrial genes for mitochondrial products
          Length = 2669

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 593  ctccaaacaacccaggccata 613
            |||||||||||||||||||||
Sbjct: 2229 ctccaaacaacccaggccata 2249
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>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 610     catagcgaacaaaattagaac 630
               |||||||||||||||||||||
Sbjct: 1468519 catagcgaacaaaattagaac 1468539
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>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete
              sequence
          Length = 244140

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    caaaacactcgaaacaccaaa 215
              |||||||||||||||||||||
Sbjct: 146740 caaaacactcgaaacaccaaa 146760
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>gb|CP000226.1| Drosophila melanogaster genomic scaffold 211000022280776
          Length = 277780

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   agtgcaagctccaaaacactc 204
             |||||||||||||||||||||
Sbjct: 88698 agtgcaagctccaaaacactc 88718
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>ref|XM_480995.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1584

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 tcatttcctgtcccaagtgg 436
           ||||||||||||||||||||
Sbjct: 713 tcatttcctgtcccaagtgg 694
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>gb|AE008590.1| Rickettsia conorii str. Malish 7, section 22 of 114 of the complete
            genome
          Length = 12509

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   aattaacctagaggaagcat 64
            ||||||||||||||||||||
Sbjct: 8416 aattaacctagaggaagcat 8397
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>gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome 1, complete sequence
          Length = 231896

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    aaagtgcaagctccaaaaca 201
              ||||||||||||||||||||
Sbjct: 150469 aaagtgcaagctccaaaaca 150488
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>ref|XM_644429.1| Entamoeba histolytica HM-1:IMSS exonuclease (293.t00010)  partial
            mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 272  agagtcatcatgtccatgtgcatcaata 299
            |||| |||| ||||||||||||||||||
Sbjct: 1563 agagacatcttgtccatgtgcatcaata 1536
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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      aattaacctagaggaagcat 64
               ||||||||||||||||||||
Sbjct: 1152626 aattaacctagaggaagcat 1152645
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>gb|BC109524.1| Bos taurus similar to ornithine decarboxylase-like protein, mRNA
            (cDNA clone MGC:134604 IMAGE:8052844), complete cds
          Length = 2191

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 443  tcttgtgggaggaactggtttcct 466
            ||||| ||||||||||||||||||
Sbjct: 1495 tcttgggggaggaactggtttcct 1472
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>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2
              novel genes, complete sequence
          Length = 144792

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    agatggtccagaaaacataa 163
              ||||||||||||||||||||
Sbjct: 107530 agatggtccagaaaacataa 107511
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>emb|AL136443.11| Human DNA sequence from clone RP3-342H9 on chromosome 6 Contains a
            CpG island, complete sequence
          Length = 74354

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 491  acatccaaatactcaaccaacagt 514
            ||||||||| ||||||||||||||
Sbjct: 1355 acatccaaagactcaaccaacagt 1332
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>emb|AL512647.14| Mouse DNA sequence from clone RP23-47A2 on chromosome 13 Contains
            part of a novel gene (6620401C13Rik), complete sequence
          Length = 199848

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  atttcctgtcccaagtggaa 438
            ||||||||||||||||||||
Sbjct: 4310 atttcctgtcccaagtggaa 4329
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>emb|BX537166.6| Zebrafish DNA sequence from clone DKEY-218I12 in linkage group 16,
             complete sequence
          Length = 60424

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 159   cataagtttgtatctacatgcaca 182
             ||||||||||||| ||||||||||
Sbjct: 40988 cataagtttgtatgtacatgcaca 40965
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>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172540

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atgtttataaacatgcacat 20
             ||||||||||||||||||||
Sbjct: 16239 atgtttataaacatgcacat 16258
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>dbj|AK029761.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930534E01 product:unclassifiable, full
            insert sequence
          Length = 3301

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 83   aatcatctagaacacacaagtcacaaaa 110
            |||||| ||||||||| |||||||||||
Sbjct: 2970 aatcatttagaacacaaaagtcacaaaa 2997
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     tcatttcctgtcccaagtgg 436
               ||||||||||||||||||||
Sbjct: 9126315 tcatttcctgtcccaagtgg 9126334
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>ref|XM_395220.2| PREDICTED: Apis mellifera similar to ENSANGP00000006622
           (LOC411753), mRNA
          Length = 2904

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 121 tattggttactatgagagac 140
           ||||||||||||||||||||
Sbjct: 944 tattggttactatgagagac 963
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>gb|AC100870.6| Homo sapiens chromosome 8, clone RP11-758H6, complete sequence
          Length = 188873

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 510   acagtgccatcacctccagc 529
             ||||||||||||||||||||
Sbjct: 79541 acagtgccatcacctccagc 79560
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>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0003H03
          Length = 157905

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    tcatttcctgtcccaagtgg 436
              ||||||||||||||||||||
Sbjct: 136625 tcatttcctgtcccaagtgg 136644
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>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence
          Length = 207983

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    caaaaagataaggactattg 125
              ||||||||||||||||||||
Sbjct: 158928 caaaaagataaggactattg 158909
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>dbj|AB084515.1| Candida parapsilosis cpr-c1 gene for conjugated polyketone
           reductase C1, complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 aaaacactcgaaacaccaaa 215
           ||||||||||||||||||||
Sbjct: 633 aaaacactcgaaacaccaaa 652
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>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   tcatttcctgtcccaagtgg 436
             ||||||||||||||||||||
Sbjct: 61809 tcatttcctgtcccaagtgg 61828
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the
            complete sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    atgtttataaacatgcacat 20
            ||||||||||||||||||||
Sbjct: 5044 atgtttataaacatgcacat 5025
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>ref|NM_001038510.1| Bos taurus similar to ornithine decarboxylase-like protein
            (MGC134604), mRNA
          Length = 2191

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 443  tcttgtgggaggaactggtttcct 466
            ||||| ||||||||||||||||||
Sbjct: 1495 tcttgggggaggaactggtttcct 1472
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>gb|AC140349.4| Mus musculus BAC clone RP24-250I16 from 12, complete sequence
          Length = 177344

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   aaagataaggactattggttacta 132
             ||||| ||||||||||||||||||
Sbjct: 20258 aaagagaaggactattggttacta 20235
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>gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, complete sequence
          Length = 182060

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    aaagataaggactattggttacta 132
              ||||| ||||||||||||||||||
Sbjct: 153522 aaagagaaggactattggttacta 153499
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     acttcagatggtccagaaaa 158
               ||||||||||||||||||||
Sbjct: 2725479 acttcagatggtccagaaaa 2725498
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>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete
             sequence
          Length = 206914

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 83    aatcatctagaacacacaagtcacaaaa 110
             |||||| ||||||||| |||||||||||
Sbjct: 46303 aatcatttagaacacaaaagtcacaaaa 46330


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,687,960
Number of Sequences: 3902068
Number of extensions: 6687960
Number of successful extensions: 163212
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162964
Number of HSP's gapped (non-prelim): 248
length of query: 729
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 706
effective length of database: 17,143,297,704
effective search space: 12103168179024
effective search space used: 12103168179024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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