ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61g22 |
|---|---|
| Clone Library Name | barley_pub |
>PSD8_DICDI (P02889) Probable 26S proteasome non-ATPase regulatory subunit 8| (Vegetative cell protein X) (M4 protein) Length = 263 Score = 32.7 bits (73), Expect = 0.25 Identities = 15/22 (68%), Positives = 19/22 (86%) Frame = -1 Query: 234 EIPAAPVINQTLGYARELERIV 169 EIP+ +I+QTL YA+ELERIV Sbjct: 242 EIPSLQLIHQTLHYAKELERIV 263
>MK14A_CYPCA (Q90336) Mitogen-activated protein kinase 14a (EC 2.7.11.24)| (Mitogen-activated protein kinase p38a) (MAP kinase p38a) (cp38a) Length = 361 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P T L F + TH + ++N VKCQK Sbjct: 86 GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK 122
>MK14A_BRARE (Q9DGE2) Mitogen-activated protein kinase 14a (EC 2.7.11.24)| (Mitogen-activated protein kinase p38a) (MAP kinase p38a) (zp38a) Length = 361 Score = 30.8 bits (68), Expect = 0.94 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P T L F + TH + ++N VKCQK Sbjct: 86 GLLDVFTPATSLKEFNDVYLVTHLMGADLNNIVKCQK 122
>MK14B_BRARE (Q9DGE1) Mitogen-activated protein kinase 14b (EC 2.7.11.24)| (Mitogen-activated protein kinase p38b) (MAP kinase p38b) (zp38b) Length = 348 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P T L F + TH + ++N VKCQK Sbjct: 86 GLLDVFSPATSLEGFNDVYLVTHLMGADLNNIVKCQK 122
>MK14B_CYPCA (Q9I958) Mitogen-activated protein kinase 14b (EC 2.7.11.24)| (Mitogen-activated protein kinase p38b) (MAP kinase p38b) (cp38b) Length = 361 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P T L F + TH + ++N VKCQK Sbjct: 86 GLLDAFSPATCLAGFNDVYLVTHLMGADLNNIVKCQK 122
>RNHL_NEUCR (Q9P5X8) Probable ribonuclease HI large subunit (EC 3.1.26.4)| (RNase HI large subunit) (RNase H(35)) Length = 317 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -1 Query: 144 LWTEFPMKRWIIGLPCDSAVLFWFNRLFHPLF---PKC 40 LW + M W G P DS + W + HP+F P+C Sbjct: 218 LWADRTMA-WGSGYPSDSKCVSWLKQNMHPVFGWGPEC 254
>MK14_RAT (P70618) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (CRK1) Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P L F + TH + ++N VKCQK Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
>MK14_PANTR (Q95NE7) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Stress-activated protein kinase 2a) Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P L F + TH + ++N VKCQK Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
>MK14_MOUSE (P47811) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (CRK1) Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P L F + TH + ++N VKCQK Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
>MK14_HUMAN (Q16539) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) (Cytokine suppressive anti-inflammatory drug-binding protein) (CSAID-binding protein) (CSBP) (MAX-interacting prote Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P L F + TH + ++N VKCQK Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
>MK14_CANFA (O02812) Mitogen-activated protein kinase 14 (EC 2.7.11.24)| (Mitogen-activated protein kinase p38 alpha) (MAP kinase p38 alpha) Length = 359 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -2 Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12 GLLD P L F + TH + ++N VKCQK Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 180 PIPSRSQGSG**RAPPVSPCRAATPSPS 263 P+P R SG APP+SP + P P+ Sbjct: 664 PVPPRPPSSGPPPAPPLSPALSGLPRPA 691 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,095,580 Number of Sequences: 219361 Number of extensions: 812109 Number of successful extensions: 2375 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2375 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
