ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSD8_DICDI (P02889) Probable 26S proteasome non-ATPase regulator... 33 0.25
2MK14A_CYPCA (Q90336) Mitogen-activated protein kinase 14a (EC 2.... 31 0.94
3MK14A_BRARE (Q9DGE2) Mitogen-activated protein kinase 14a (EC 2.... 31 0.94
4MK14B_BRARE (Q9DGE1) Mitogen-activated protein kinase 14b (EC 2.... 30 1.2
5MK14B_CYPCA (Q9I958) Mitogen-activated protein kinase 14b (EC 2.... 30 2.1
6RNHL_NEUCR (Q9P5X8) Probable ribonuclease HI large subunit (EC 3... 28 4.7
7MK14_RAT (P70618) Mitogen-activated protein kinase 14 (EC 2.7.11... 28 4.7
8MK14_PANTR (Q95NE7) Mitogen-activated protein kinase 14 (EC 2.7.... 28 4.7
9MK14_MOUSE (P47811) Mitogen-activated protein kinase 14 (EC 2.7.... 28 4.7
10MK14_HUMAN (Q16539) Mitogen-activated protein kinase 14 (EC 2.7.... 28 4.7
11MK14_CANFA (O02812) Mitogen-activated protein kinase 14 (EC 2.7.... 28 4.7
12MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi... 28 6.1

>PSD8_DICDI (P02889) Probable 26S proteasome non-ATPase regulatory subunit 8|
           (Vegetative cell protein X) (M4 protein)
          Length = 263

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -1

Query: 234 EIPAAPVINQTLGYARELERIV 169
           EIP+  +I+QTL YA+ELERIV
Sbjct: 242 EIPSLQLIHQTLHYAKELERIV 263



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>MK14A_CYPCA (Q90336) Mitogen-activated protein kinase 14a (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38a) (MAP kinase
           p38a) (cp38a)
          Length = 361

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P T L  F  +   TH   + ++N VKCQK
Sbjct: 86  GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK 122



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>MK14A_BRARE (Q9DGE2) Mitogen-activated protein kinase 14a (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38a) (MAP kinase
           p38a) (zp38a)
          Length = 361

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P T L  F  +   TH   + ++N VKCQK
Sbjct: 86  GLLDVFTPATSLKEFNDVYLVTHLMGADLNNIVKCQK 122



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>MK14B_BRARE (Q9DGE1) Mitogen-activated protein kinase 14b (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38b) (MAP kinase
           p38b) (zp38b)
          Length = 348

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P T L  F  +   TH   + ++N VKCQK
Sbjct: 86  GLLDVFSPATSLEGFNDVYLVTHLMGADLNNIVKCQK 122



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>MK14B_CYPCA (Q9I958) Mitogen-activated protein kinase 14b (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38b) (MAP kinase
           p38b) (cp38b)
          Length = 361

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P T L  F  +   TH   + ++N VKCQK
Sbjct: 86  GLLDAFSPATCLAGFNDVYLVTHLMGADLNNIVKCQK 122



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>RNHL_NEUCR (Q9P5X8) Probable ribonuclease HI large subunit (EC 3.1.26.4)|
           (RNase HI large subunit) (RNase H(35))
          Length = 317

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -1

Query: 144 LWTEFPMKRWIIGLPCDSAVLFWFNRLFHPLF---PKC 40
           LW +  M  W  G P DS  + W  +  HP+F   P+C
Sbjct: 218 LWADRTMA-WGSGYPSDSKCVSWLKQNMHPVFGWGPEC 254



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>MK14_RAT (P70618) Mitogen-activated protein kinase 14 (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38 alpha) (MAP kinase
           p38 alpha) (CRK1)
          Length = 359

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P   L  F  +   TH   + ++N VKCQK
Sbjct: 84  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120



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>MK14_PANTR (Q95NE7) Mitogen-activated protein kinase 14 (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38 alpha) (MAP kinase
           p38 alpha) (Stress-activated protein kinase 2a)
          Length = 359

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P   L  F  +   TH   + ++N VKCQK
Sbjct: 84  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120



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>MK14_MOUSE (P47811) Mitogen-activated protein kinase 14 (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38 alpha) (MAP kinase
           p38 alpha) (CRK1)
          Length = 359

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P   L  F  +   TH   + ++N VKCQK
Sbjct: 84  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120



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>MK14_HUMAN (Q16539) Mitogen-activated protein kinase 14 (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38 alpha) (MAP kinase
           p38 alpha) (Cytokine suppressive anti-inflammatory
           drug-binding protein) (CSAID-binding protein) (CSBP)
           (MAX-interacting prote
          Length = 359

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P   L  F  +   TH   + ++N VKCQK
Sbjct: 84  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120



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>MK14_CANFA (O02812) Mitogen-activated protein kinase 14 (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38 alpha) (MAP kinase
           p38 alpha)
          Length = 359

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 116 GLLDC--PVTQLYYFGSIVCFTHCFQSAVDNTVKCQK 12
           GLLD   P   L  F  +   TH   + ++N VKCQK
Sbjct: 84  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120



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>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 180 PIPSRSQGSG**RAPPVSPCRAATPSPS 263
           P+P R   SG   APP+SP  +  P P+
Sbjct: 664 PVPPRPPSSGPPPAPPLSPALSGLPRPA 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,095,580
Number of Sequences: 219361
Number of extensions: 812109
Number of successful extensions: 2375
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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