>ref|XM_477795.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 804

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 227 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
           |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 743 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 696

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                                
Query: 227      ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
                |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 14474267 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 14474314

>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0673E01
          Length = 125909

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 227   ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
             |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 94598 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 94645

>dbj|AK101316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034D03, full
           insert sequence
          Length = 1218

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 227 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
           |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 823 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 776

>dbj|AK061408.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A10, full
           insert sequence
          Length = 1053

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 227 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
           |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 822 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 775

>dbj|AK061383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H08, full
           insert sequence
          Length = 1230

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 227 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
           |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 834 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 787

>gb|AY103818.1| Zea mays PCO124949 mRNA sequence
          Length = 1251

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 230 atctccttgcagggctgcgactccttcgccttctggaacaagac 273
           ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 948 atctccttgcagggctgtgactccttcgccttctggaagaagac 905

>dbj|AB037153.1| Oryza sativa (japonica cultivar-group) OsRPN12 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit12,
           complete cds
          Length = 1063

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                           
Query: 227 ggtatctccttgcagggctgcgactccttcgccttctggaacaagacg 274
           |||||||||||||||||||| | |||||||||||||||||| ||||||
Sbjct: 818 ggtatctccttgcagggctgggtctccttcgccttctggaagaagacg 771

>gb|BT016262.1| Zea mays clone Contig95 mRNA sequence
          Length = 1020

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 230 atctccttgcagggctgcgactccttcgccttctggaacaagac 273
           ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 742 atctccttgcagggctgtgattccttcgccttctggaagaagac 699

>emb|AL590398.9| Human DNA sequence from clone RP11-446G24 on chromosome 6 Contains the
             5' end of the HDAC2 gene for histone deacetylase 2 (human
             transcriptional regulator homolog RPD3, YAF1), two
             putative novel genes, a pseudogene similar to mouse D7Rp2e
             (DNA segment, Chr7, Roswell Park 2 complex, expressed) and
             a CpG island, complete sequence
          Length = 78366

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   ttgaaagaaaagagaggcaaa 165
             |||||||||||||||||||||
Sbjct: 12917 ttgaaagaaaagagaggcaaa 12937

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     caagggtctggttgatgacgggcgc 222
               |||||||||||| ||||||||||||
Sbjct: 4808975 caagggtctggtcgatgacgggcgc 4808951

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 198     caagggtctggttgatgacgggcgc 222
               |||||||||||| ||||||||||||
Sbjct: 4813886 caagggtctggtcgatgacgggcgc 4813862

>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a
              eukaryotic translation initiation factor 4E binding protein
              pseudogene and part of a novel gene, complete sequence
          Length = 127913

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cttttgacatttcacagtat 31
              ||||||||||||||||||||
Sbjct: 108580 cttttgacatttcacagtat 108561

>gb|AF535436.1| HIV-1 isolate 88USMF880113sg from USA envelope glycoprotein (env)
          gene, partial cds
          Length = 602

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 74 aaccaaaatagtacagctga 93
          ||||||||||||||||||||
Sbjct: 49 aaccaaaatagtacagctga 68

>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence
          Length = 162574

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    agcactttggaaacagtggg 58
             ||||||||||||||||||||
Sbjct: 36157 agcactttggaaacagtggg 36176

>gb|AC135782.4| Homo sapiens chromosome 16 clone CTD-2555A7, complete sequence
          Length = 163550

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   tccacctcttcatgggaaattcag 137
             |||||||||||||||||| |||||
Sbjct: 47235 tccacctcttcatgggaatttcag 47258

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 240     agggctgcgactccttcgcc 259
               ||||||||||||||||||||
Sbjct: 7646676 agggctgcgactccttcgcc 7646695

>gb|AC122538.4| Mus musculus BAC clone RP24-548J11 from 16, complete sequence
          Length = 209585

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   aattcagtccaaagttgaaagaaa 154
             |||||||||||||| |||||||||
Sbjct: 92931 aattcagtccaaagctgaaagaaa 92908

>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   taatccacctcttcatgggaaatt 134
             |||||||||||||||| |||||||
Sbjct: 36400 taatccacctcttcattggaaatt 36377


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,744,647
Number of Sequences: 3902068
Number of extensions: 3744647
Number of successful extensions: 85854
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85778
Number of HSP's gapped (non-prelim): 76
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)