ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61g19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 595 bits (300), Expect = e-167 Identities = 364/384 (94%), Gaps = 1/384 (0%) Strand = Plus / Minus Query: 145 caccatcaatctctcaaaacttggttcatgctaccaaaaattaaaccacatcctctggag 204 ||||||||||||||||||||||||| ||||||||||||| ||||||||| || || |||| Sbjct: 1579 caccatcaatctctcaaaacttggtccatgctaccaaaa-ttaaaccacgtcatccggag 1521 Query: 205 agactccaccgtgtcgctcatcagtatccgaagccggagttgtccatggggttgacgagg 264 | |||| || |||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1520 aaactcggccatgtcactcatcagtatccgaagccggagttgtccatggggttggcgagg 1461 Query: 265 ggagcgggctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttg 324 || |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1460 ggcgcggcctcaggctccttgatctcgacgaccaccacgtcggacgtcaggaaggtcttg 1401 Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 384 |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1400 gccaccgatgcggcgtgctccaggcaacatctcaccaccttggtggggtcgatgatacca 1341 Query: 385 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 1281 Query: 445 ttagaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaac 504 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 1280 ttagaaagaaccttctcggtaacaacactgccattgacaccggcattcttggcgatcaac 1221 Query: 505 ttgagtgggtagcacagcgccctc 528 ||||||||||||||||| |||||| Sbjct: 1220 ttgagtgggtagcacagtgccctc 1197 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 18 gtaaaacgagagccgtaagctgttccaattacatcaagaaatttccgctaaatgtttctc 77 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1707 gtaaaacaagagccgtatgctgttccaattacatcaagaaatttccgctaaatgtttctc 1648 Query: 78 tgcttatttcgccattctggcaggcacatcatattgcatttt 119 ||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 1647 tgcttatttcgccgttctggc-ggcacatcacattgcatttt 1607
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Minus Query: 222 tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 281 ||||||||| ||| |||||||||||||||| |||||| || ||| || ||||||||||| Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839 Query: 282 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 341 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779 Query: 342 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 401 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719 Query: 402 gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 461 |||||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659 Query: 462 ggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 521 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1658 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1599 Query: 522 cgc 524 ||| Sbjct: 1598 cgc 1596
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Minus Query: 222 tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 281 ||||||||| ||| |||||||||||||||| |||||| || ||| || ||||||||||| Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839 Query: 282 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 341 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779 Query: 342 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 401 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719 Query: 402 gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 461 |||||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659 Query: 462 ggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 521 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1658 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1599 Query: 522 cgc 524 ||| Sbjct: 1598 cgc 1596
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Minus Query: 222 tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 281 ||||||||| ||| |||||||||||||||| |||||| || ||| || ||||||||||| Sbjct: 1566 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1507 Query: 282 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 341 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1506 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1447 Query: 342 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 401 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1446 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1387 Query: 402 gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 461 |||||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1386 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1327 Query: 462 ggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 521 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1326 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1267 Query: 522 cgc 524 ||| Sbjct: 1266 cgc 1264
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 323 bits (163), Expect = 3e-85 Identities = 268/303 (88%) Strand = Plus / Minus Query: 222 tcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctc 281 ||||||||| ||| |||||||||||||||| |||||| || ||| || ||||||||||| Sbjct: 892 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 833 Query: 282 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 341 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 832 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 773 Query: 342 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 401 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 772 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 713 Query: 402 gtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 461 |||||| ||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 712 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 653 Query: 462 ggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 521 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 652 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 593 Query: 522 cgc 524 ||| Sbjct: 592 cgc 590
>gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta subunit mRNA, partial cds Length = 1471 Score = 254 bits (128), Expect = 3e-64 Identities = 263/308 (85%) Strand = Plus / Minus Query: 221 ctcatcagtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggct 280 ||||||||||||| |||| ||||||||||| ||||| ||| || | | ||| |||| Sbjct: 1235 ctcatcagtatccatagccagagttgtccatcgggtttgcgacaggtgtagcctccggct 1176 Query: 281 ccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcat 340 ||||||| ||||||||||| || || || ||||||||||||||||||||||||||||| | Sbjct: 1175 ccttgatatcgacgaccacaacatctgatgtcaggaaggtcttggccaccgacgcggcgt 1116 Query: 341 gctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcct 400 |||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 1115 gctccaagcagcatctcaccaccttggtggggtcaatgataccagcagccatcaggtcct 1056 Query: 401 cgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttct 460 ||||||| ||||| ||||| ||||| || |||||||||| || |||||||| ||||||| Sbjct: 1055 cgtactgtccagtagcagcattgtaaccatacttgaagttatcattagaaaggaccttct 996 Query: 461 cggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcaca 520 | || |||||||| ||||||||||| || || || || ||||| || |||||||||| || Sbjct: 995 cagtgacaacactgccattgacaccggcgtttttagcaatcaatttaagtgggtagctca 936 Query: 521 gcgccctc 528 | |||||| Sbjct: 935 gggccctc 928
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 250 bits (126), Expect = 4e-63 Identities = 258/302 (85%) Strand = Plus / Minus Query: 227 agtatccgaagccggagttgtccatggggttgacgaggggagcgggctcaggctccttga 286 ||||||| |||| ||||||||||| ||||| | ||||| || | ||| |||||||| | Sbjct: 2034 agtatccatagccagagttgtccatcgggttagcaaggggcgcagactctggctccttaa 1975 Query: 287 tctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctcca 346 | ||||||||||| || || || ||||||||||||||||||||||||||||||||||||| Sbjct: 1974 tatcgacgaccacaacatcagatgtcaggaaggtcttggccaccgacgcggcatgctcca 1915 Query: 347 ggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcgtact 406 || ||||||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 1914 aacagcatctcaccaccttagtaggatcaatgataccagcagccatcaagtcctcgtact 1855 Query: 407 gcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaa 466 | ||||| ||||| ||||| || |||||||||| ||||||||||| |||||||| || | Sbjct: 1854 gtccagtagcagcattgtaaccatacttgaagttatcgttagaaaggaccttctcagtga 1795 Query: 467 caacactaccattgacaccagcattcttggcgatcaacttgagtgggtagcacagcgccc 526 | || || ||||||||||| ||||| || || ||||| || |||||||||| ||| |||| Sbjct: 1794 cgacgctgccattgacaccggcatttttagcaatcaatttaagtgggtagctcagggccc 1735 Query: 527 tc 528 || Sbjct: 1734 tc 1733
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 1890 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1831 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1830 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1771 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 ||||| || || |||||||| || ||||||||||| |||||||||| || || ||||| Sbjct: 1770 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1711 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactaccattg 480 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1710 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1651 Query: 481 acaccagcattcttggcgat 500 |||||||||||||||||||| Sbjct: 1650 acaccagcattcttggcgat 1631
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 1917 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1858 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1857 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1798 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 ||||| || || |||||||| || ||||||||||| |||||||||| || || ||||| Sbjct: 1797 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1738 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactaccattg 480 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1737 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1678 Query: 481 acaccagcattcttggcgat 500 |||||||||||||||||||| Sbjct: 1677 acaccagcattcttggcgat 1658
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 1787 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1728 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1727 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1668 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 ||||| || || |||||||| || ||||||||||| |||||||||| || || ||||| Sbjct: 1667 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1608 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactaccattg 480 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1607 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1548 Query: 481 acaccagcattcttggcgat 500 |||||||||||||||||||| Sbjct: 1547 acaccagcattcttggcgat 1528
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 151 bits (76), Expect = 3e-33 Identities = 214/260 (82%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 1909 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1850 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1849 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1790 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 ||||| || || |||||||| || ||||||||||| |||||||||| || || ||||| Sbjct: 1789 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1730 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactaccattg 480 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1729 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1670 Query: 481 acaccagcattcttggcgat 500 |||||||||||||||||||| Sbjct: 1669 acaccagcattcttggcgat 1650
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 143 bits (72), Expect = 7e-31 Identities = 214/260 (82%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 1871 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1812 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1811 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1752 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 ||||| || || |||||||| || ||||||||||| |||||||||| || || ||||| Sbjct: 1751 acctttgttggatcgatgattcctgcagccatcaa-tcctcgtacttgccggttgcagca 1693 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactaccattg 480 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1692 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1633 Query: 481 acaccagcattcttggcgat 500 |||||||||||||||||||| Sbjct: 1632 acaccagcattcttggcgat 1613
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 135 bits (68), Expect = 2e-28 Identities = 191/232 (82%) Strand = Plus / Minus Query: 271 ggctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccacc 330 |||||||||||||||||||| || ||||| ||| ||| ||| ||| ||||| || ||| Sbjct: 1820 ggctcaggctccttgatctcaacaaccacacagtcagacatcaagaatgtctttgcaacc 1761 Query: 331 gacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagcc 390 || || ||||| |||| |||||||||||| |||||||| || |||||||| || |||||| Sbjct: 1760 gaagctgcatgttccaagcaacatctcacaaccttagttggatcgatgattcctgcagcc 1701 Query: 391 atcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaa 450 || | |||||||||| || || ||||| ||||| |||||||| | || ||||||||| Sbjct: 1700 attagatcctcgtacttgccggttgcagcattgtaaccgaacttcacattatcgttagaa 1641 Query: 451 agaaccttctcggtaacaacactaccattgacaccagcattcttggcgatca 502 || ||||||||| |||| || || |||||||| || ||||||||||| |||| Sbjct: 1640 agcaccttctcgctaactacgcttccattgactcctgcattcttggcaatca 1589
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 6e-28 Identities = 112/127 (88%) Strand = Plus / Plus Query: 238 ccggagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgacc 297 |||||||||||||| |||||| || ||| || |||||||||||||||||||||||||| Sbjct: 810397 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 810456 Query: 298 accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 357 || || ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 810457 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 810516 Query: 358 accacct 364 ||||||| Sbjct: 810517 accacct 810523 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 810972 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 811031 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaacct 457 ||||| || ||||||||||| |||||||| ||||||| Sbjct: 811032 ttgtaaccaaacttgaagttatcgttagagagaacct 811068 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 453 aaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgg 512 |||||||||||||||||| || ||||| |||||||||||||| || ||||| || || || Sbjct: 811141 aaccttctcggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgg 811200 Query: 513 gtagcacagcgc 524 ||||| |||||| Sbjct: 811201 gtagctcagcgc 811212 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 cttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagc 419 |||||||||||| || | |||||| |||| ||||||||||||| ||||| ||||| Sbjct: 806511 cttagtggggtcaatagtcccagcaaccattaagtcctcgtacttgccagtagcagc 806567
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 133 bits (67), Expect = 6e-28 Identities = 112/127 (88%) Strand = Plus / Plus Query: 238 ccggagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgacc 297 |||||||||||||| |||||| || ||| || |||||||||||||||||||||||||| Sbjct: 93531 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 93590 Query: 298 accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 357 || || ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 93591 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 93650 Query: 358 accacct 364 ||||||| Sbjct: 93651 accacct 93657 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcg 420 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 94106 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 94165 Query: 421 ttgtagccgaacttgaagttgtcgttagaaagaacct 457 ||||| || ||||||||||| |||||||| ||||||| Sbjct: 94166 ttgtaaccaaacttgaagttatcgttagagagaacct 94202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 453 aaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaacttgagtgg 512 |||||||||||||||||| || ||||| |||||||||||||| || ||||| || || || Sbjct: 94275 aaccttctcggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgg 94334 Query: 513 gtagcacagcgc 524 ||||| |||||| Sbjct: 94335 gtagctcagcgc 94346 Score = 42.1 bits (21), Expect = 1.8 Identities = 48/57 (84%) Strand = Plus / Plus Query: 363 cttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagc 419 |||||||||||| || | |||||| |||| ||||||||||||| ||||| ||||| Sbjct: 89645 cttagtggggtcaatagtcccagcaaccattaagtcctcgtacttgccagtagcagc 89701
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 109 bits (55), Expect = 9e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 384 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1789 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1730 Query: 385 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 444 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1729 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1670 Query: 445 ttagaaagaaccttctcggtaacaacactaccattgacaccagcatt 491 || | ||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 1669 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcatt 1623
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 109 bits (55), Expect = 9e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 384 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750 Query: 385 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 444 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1749 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1690 Query: 445 ttagaaagaaccttctcggtaacaacactaccattgacaccagcatt 491 || | ||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 1689 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcatt 1643
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Minus Query: 315 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 374 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 1792 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1733 Query: 375 gatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaactt 434 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 1732 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 1673 Query: 435 gaagttgtcgttagaaagaaccttctcggtaacaacactaccattgacaccagcattctt 494 |||||| || || | |||||||||||| ||||| ||||| ||||| || || ||||| || Sbjct: 1672 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 1613 Query: 495 ggcgatcaacttgagtgggtagc 517 || ||||| || ||||| |||| Sbjct: 1612 tgcaatcaatttaagtggatagc 1590
>gb|BT018139.1| Zea mays clone EL01N0554H01.c mRNA sequence Length = 975 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Minus Query: 315 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 374 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 587 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 528 Query: 375 gatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaactt 434 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 527 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 468 Query: 435 gaagttgtcgttagaaagaaccttctcggtaacaacactaccattgacaccagcattctt 494 |||||| || || | |||||||||||| ||||| ||||| ||||| || || ||||| || Sbjct: 467 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 408 Query: 495 ggcgatcaacttgagtgggtagc 517 || ||||| || ||||| |||| Sbjct: 407 tgcaatcaatttaagtggatagc 385
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 109 bits (55), Expect = 9e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 384 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1788 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1729 Query: 385 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 444 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1728 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1669 Query: 445 ttagaaagaaccttctcggtaacaacactaccattgacaccagcatt 491 || | ||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 1668 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcatt 1622
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 109 bits (55), Expect = 9e-21 Identities = 139/167 (83%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 384 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750 Query: 385 gcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcg 444 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1749 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1690 Query: 445 ttagaaagaaccttctcggtaacaacactaccattgacaccagcatt 491 || | ||| |||||||| ||||||||||| || || ||||||||||| Sbjct: 1689 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcatt 1643
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 109 bits (55), Expect = 9e-21 Identities = 166/203 (81%) Strand = Plus / Minus Query: 315 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 374 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 1920 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1861 Query: 375 gatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaactt 434 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 1860 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 1801 Query: 435 gaagttgtcgttagaaagaaccttctcggtaacaacactaccattgacaccagcattctt 494 |||||| || || | |||||||||||| ||||| ||||| ||||| || || ||||| || Sbjct: 1800 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 1741 Query: 495 ggcgatcaacttgagtgggtagc 517 || ||||| || ||||| |||| Sbjct: 1740 tgcaatcaatttaagtggatagc 1718
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 83.8 bits (42), Expect = 5e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 334 gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 393 |||||||| || | |||||||||||| ||||| || ||||||||||| || ||||||||| Sbjct: 1682 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 1623 Query: 394 aagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaaga 453 | ||| || |||| || || ||||| ||||| || || || | || ||||||| || Sbjct: 1622 aggtcttcatacttgccggttgcagcattgtatccaaatttcacattatcgttagccagc 1563 Query: 454 accttctcggtaacaacactaccattgacaccagcattcttggcgatcaa 503 ||||||||| | |||||||| ||||| |||||||||||||| || ||||| Sbjct: 1562 accttctcgctgacaacacttccattaacaccagcattcttagctatcaa 1513
>dbj|AK118623.2| Arabidopsis thaliana At3g13470 mRNA for putative chaperonin 60 beta, complete cds, clone: RAFL19-88-M03 Length = 471 Score = 83.8 bits (42), Expect = 5e-13 Identities = 138/170 (81%) Strand = Plus / Minus Query: 334 gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 393 |||||||| || | |||||||||||| ||||| || ||||||||||| || ||||||||| Sbjct: 185 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 126 Query: 394 aagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaaga 453 | ||| || |||| || || ||||| ||||| || || || | || ||||||| || Sbjct: 125 aggtcttcatacttgccggttgcagcattgtatccaaatttcacattatcgttagccagc 66 Query: 454 accttctcggtaacaacactaccattgacaccagcattcttggcgatcaa 503 ||||||||| | |||||||| ||||| |||||||||||||| || ||||| Sbjct: 65 accttctcgctgacaacacttccattaacaccagcattcttagctatcaa 16
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 446 tagaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaact 505 |||||||||||||||| | ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 1661 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 1602 Query: 506 tgagtgggtagc 517 | |||||||||| Sbjct: 1601 tcagtgggtagc 1590
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 446 tagaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaact 505 |||||||||||||||| | ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 1701 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 1642 Query: 506 tgagtgggtagc 517 | |||||||||| Sbjct: 1641 tcagtgggtagc 1630
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 446 tagaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaact 505 |||||||||||||||| | ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 299 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 240 Query: 506 tgagtgggtagc 517 | |||||||||| Sbjct: 239 tcagtgggtagc 228
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 446 tagaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaact 505 |||||||||||||||| | ||||| || |||||||||||||| ||||||||||| |||| Sbjct: 522 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 463 Query: 506 tgagtgggtagc 517 | |||||||||| Sbjct: 462 tcagtgggtagc 451
>gb|DQ226886.1| Boechera divaricarpa isolate SLW-C-H11 mRNA sequence Length = 331 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/163 (80%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| ||| || || ||||| ||||||||||| || || || Sbjct: 163 gagttgtccattgggttgccgacgggggctggttcaggttccttgatctcaacaacaaca 104 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || || || || || || |||| |||||||||||| Sbjct: 103 cagtccgacatcaagaacgtctttgcaactgaagctgcgtgttccaagcaacatctcaca 44 Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctcgt 403 ||||| || || |||||||| || |||||||| || ||||||| Sbjct: 43 acctttgttggatcgatgattcctgcagccattaaatcctcgt 1
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 447 agaaagaaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaactt 506 ||||||||||||||| | ||||| || ||||| |||||||| ||||||||||| ||||| Sbjct: 1054 agaaagaaccttctcactgacaacgctgccatttacaccagcgttcttggcgattaactt 995 Query: 507 gagtgggtagc 517 |||||||||| Sbjct: 994 cagtgggtagc 984 Score = 40.1 bits (20), Expect = 7.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 337 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 392 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 1164 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1109
>gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-like subunit, partial cds Length = 1618 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 285 gatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctc 344 ||||||| |||||||||||| | | |||||||||||||||||||||| |||| | ||| Sbjct: 729 gatctcggtgaccaccacgtcagccagcaggaaggtcttggccaccgacacggcgttctc 670 Query: 345 caggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcg 402 ||| | || | |||||||| |||||||||||||| || || |||||| ||||||| Sbjct: 669 cagcgagcagcggaccaccttggtggggtcgatgatgccggcctccatcaggtcctcg 612
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccacct 364 ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 163146 gccaccgacgcagcatgctccaagcaacatctcaccacct 163107 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 453 aaccttctcggtaacaacactaccattgacaccagcatt 491 ||||||||| ||||||||||| || || ||||||||||| Sbjct: 162650 aaccttctcagtaacaacactgccgttaacaccagcatt 162612 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctc 401 ||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 162831 accttggtgggatcaataataccagcagccatcaaatcctc 162791
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 466 acaacactaccattgacaccagcattcttggcgatcaacttgagtgggtagc 517 ||||| || |||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1913 acaacgctgccattgacaccagcgttcttggcgattaacttcagtgggtagc 1862 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 337 gcatgctccaggcaacatctcaccacctt 365 |||||||| |||||||||||||| ||||| Sbjct: 2197 gcatgctctaggcaacatctcacaacctt 2169
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 325 gccaccgacgcggcatgctccaggcaacatctcaccacct 364 ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 112173 gccaccgacgcagcatgctccaagcaacatctcaccacct 112134 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 453 aaccttctcggtaacaacactaccattgacaccagcatt 491 ||||||||| ||||||||||| || || ||||||||||| Sbjct: 111677 aaccttctcagtaacaacactgccgttaacaccagcatt 111639 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 361 accttagtggggtcgatgataccagcagccatcaagtcctc 401 ||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 111858 accttggtgggatcaataataccagcagccatcaaatcctc 111818
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 454 accttctcggtaacaacactaccattgacaccagcattcttggcgat 500 ||||||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 54712 accttctcgctaactacacttccattaacaccagcattcttggcgat 54666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Minus Query: 241 gagttgtccatggggttgacgaggggagcgggctcaggctccttgatctcgacgaccacc 300 ||||||||||| |||||| ||| |||| | || ||||| ||||||||||| || || || Sbjct: 55104 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 55045 Query: 301 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 360 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 55044 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 54985 Query: 361 acct 364 |||| Sbjct: 54984 acct 54981 Score = 50.1 bits (25), Expect = 0.007 Identities = 70/85 (82%) Strand = Plus / Minus Query: 373 tcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttgtagccgaac 432 |||||||| || ||||||||||| |||||||||| || || ||||| ||||| ||||| Sbjct: 54880 tcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagcattgtaaccgaat 54821 Query: 433 ttgaagttgtcgttagaaagaacct 457 || | ||| ||||| ||||| |||| Sbjct: 54820 ttcacgttatcgttggaaagcacct 54796
>gb|L27471.1|CRECPN1A Chlamydomonas reinhardtii chaperonin beta-like subunit, complete cds Length = 1970 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 294 gaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaaca 353 |||||||||||||| | |||||||||||||||||||||| |||| | ||||| | | || Sbjct: 1227 gaccaccacgtccgccagcaggaaggtcttggccaccgacacggcgttctccatggagca 1168 Query: 354 tctcaccaccttagtggggtcgatgat 380 | |||||||| | |||||||||||| Sbjct: 1167 gcggaccaccttggaggggtcgatgat 1141
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 451 agaaccttctcggtaacaacactaccattgacaccagcattctt 494 ||||||||||| | |||||||||||||| |||||||||||||| Sbjct: 1680 agaaccttctcactcacaacactaccattaacaccagcattctt 1637 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 337 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 392 ||||| |||||||||||||| |||||||| || || || ||||| || |||||||| Sbjct: 1794 gcatgttccaggcaacatctgaccacctttgttggatcaatgatccctgcagccat 1739
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 453 aaccttctcggtaacaacactaccattgacaccagcattcttggcgatcaa 503 |||||||||| | |||||||| ||||| |||||||||||||| || ||||| Sbjct: 46053 aaccttctcgctgacaacacttccattaacaccagcattcttagctatcaa 46003
>dbj|AB158542.1| Ipomoea nil cpn60 beta mRNA for 60 kDa chaperonin beta subunit-like protein, partial cds Length = 437 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 349 caacatctcaccaccttagtggggtcgatgataccagcagccatcaagtc 398 ||||||||||||||||| || || || || || ||||||||||||||||| Sbjct: 50 caacatctcaccaccttggttggatcaataattccagcagccatcaagtc 1
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 466 acaacactaccattgacaccagcattcttggcgatcaactt 506 |||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 1625 acaacacttccattaacaccagcattcttggctattaactt 1585 Score = 48.1 bits (24), Expect = 0.029 Identities = 48/56 (85%) Strand = Plus / Minus Query: 337 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 392 |||||||||| ||||||||| ||||| || || || || || |||||||||||||| Sbjct: 1754 gcatgctccaagcaacatcttaccacttttgtaggatcaattataccagcagccat 1699
>gb|AY811022.1| Schistosoma japonicum SJCHGC03737 protein mRNA, partial cds Length = 568 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 aactacatcatcatcaccatca 152 |||||||||||||||||||||| Sbjct: 282 aactacatcatcatcaccatca 303
>gb|AF233387.1| Rhodococcus equi GroEL (groEL) gene, complete cds; and unknown genes Length = 4713 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 370 gggtcgatgataccagcagccatcaagtcctcgtactgcccagtggcagcgttg 423 |||||| |||| |||||||||| || ||||||||||| || ||||| |||||| Sbjct: 4311 gggtcgttgatgccagcagccagcaggtcctcgtactcaccggtggcggcgttg 4258
>ref|XM_975351.1| PREDICTED: Mus musculus similar to odd Oz/ten-m homolog 2 (LOC669490), mRNA Length = 7697 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 ggagttgtccatggggttgacg 261 |||||||||||||||||||||| Sbjct: 2277 ggagttgtccatggggttgacg 2256
>emb|Z69885.1|CET04C10 Caenorhabditis elegans Cosmid T04C10, complete sequence Length = 20958 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 catcatcatcaccatcaatctc 157 |||||||||||||||||||||| Sbjct: 1554 catcatcatcaccatcaatctc 1533
>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence Length = 163778 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 actacatcatcatcaccatcaa 153 |||||||||||||||||||||| Sbjct: 8500 actacatcatcatcaccatcaa 8521
>gb|AC121888.3| Mus musculus BAC clone RP24-142M5 from chromosome 1, complete sequence Length = 158354 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 actacatcatcatcaccatcaa 153 |||||||||||||||||||||| Sbjct: 102961 actacatcatcatcaccatcaa 102982
>ref|XM_546253.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 2 (LOC489135), mRNA Length = 8210 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 ggagttgtccatggggttgacg 261 |||||||||||||||||||||| Sbjct: 3873 ggagttgtccatggggttgacg 3852
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 ggagttgtccatggggttgacg 261 |||||||||||||||||||||| Sbjct: 113689 ggagttgtccatggggttgacg 113710
>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete sequence Length = 157494 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 taaatgtttctctgcttatttc 87 |||||||||||||||||||||| Sbjct: 138017 taaatgtttctctgcttatttc 138038
>ref|NM_078055.2| Caenorhabditis elegans ATF (cAMP-dependent transciption factor) family member (atf-5) (atf-5) mRNA, complete cds Length = 1044 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatctc 157 |||||||||||||||||||||| Sbjct: 320 catcatcatcaccatcaatctc 341
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 361 accttagtggggtcgatgataccagc 386 |||||||| ||||||||||||||||| Sbjct: 381194 accttagttgggtcgatgataccagc 381169
>ref|NM_011856.2| Mus musculus odd Oz/ten-m homolog 2 (Drosophila) (Odz2), mRNA Length = 8797 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 ggagttgtccatggggttgacg 261 |||||||||||||||||||||| Sbjct: 4366 ggagttgtccatggggttgacg 4345
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 44.1 bits (22), Expect = 0.46 Identities = 97/122 (79%) Strand = Plus / Minus Query: 277 ggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcg 336 |||||||||||||| || ||||| || ||| ||| ||| ||||| ||||| || || Sbjct: 1785 ggctccttgatctcaaccaccacgcaatctgacatcaagaatgtcttagccacagatgca 1726 Query: 337 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaag 396 || || || || ||||| ||||||||||| || || || ||||| ||||||||||| ||| Sbjct: 1725 gcgtgttctagacaacacctcaccacctttgttggatcaatgatgccagcagccattaag 1666 Query: 397 tc 398 || Sbjct: 1665 tc 1664
>emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chromosome X, complete sequence Length = 220669 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 129 aaaactacatcatcatcaccatcaat 154 |||| ||||||||||||||||||||| Sbjct: 165706 aaaaatacatcatcatcaccatcaat 165731
>dbj|AB025411.1| Mus musculus mRNA for Ten-m2, complete cds Length = 8797 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 ggagttgtccatggggttgacg 261 |||||||||||||||||||||| Sbjct: 4366 ggagttgtccatggggttgacg 4345
>ref|NM_128753.2| Arabidopsis thaliana unknown protein AT2G31945 mRNA, complete cds Length = 546 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aactacatcatcatcaccatc 151 ||||||||||||||||||||| Sbjct: 374 aactacatcatcatcaccatc 394
>ref|XM_614930.2| PREDICTED: Bos taurus similar to odd Oz/ten-m homolog 2 (LOC541183), mRNA Length = 4770 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 ggagttgtccatggggttgac 260 ||||||||||||||||||||| Sbjct: 1563 ggagttgtccatggggttgac 1543
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 actacatcatcatcaccatca 152 ||||||||||||||||||||| Sbjct: 33931 actacatcatcatcaccatca 33911
>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part of the GRM1 gene for metabotropic glutamate receptor 1 and a novel pseudogene, complete sequence Length = 53728 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tgcatttttcttatctcaaaa 132 ||||||||||||||||||||| Sbjct: 4551 tgcatttttcttatctcaaaa 4531
>gb|AY097404.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, complete cds Length = 288 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aactacatcatcatcaccatc 151 ||||||||||||||||||||| Sbjct: 264 aactacatcatcatcaccatc 284
>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete sequence Length = 100665 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 aactacatcatcatcaccatc 151 ||||||||||||||||||||| Sbjct: 4484 aactacatcatcatcaccatc 4464
>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence Length = 192063 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 132 actacatcatcatcaccatcaatct 156 ||||||||||||||| ||||||||| Sbjct: 58078 actacatcatcatcatcatcaatct 58102
>gb|AY075662.1| Arabidopsis thaliana At2g31940/F20M17.2 mRNA, complete cds Length = 546 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aactacatcatcatcaccatc 151 ||||||||||||||||||||| Sbjct: 374 aactacatcatcatcaccatc 394
>gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153081 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 actacatcatcatcaccatca 152 ||||||||||||||||||||| Sbjct: 35629 actacatcatcatcaccatca 35649
>gb|AY086578.1| Arabidopsis thaliana clone 258917 mRNA, complete sequence Length = 525 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 aactacatcatcatcaccatc 151 ||||||||||||||||||||| Sbjct: 369 aactacatcatcatcaccatc 389
>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete sequence Length = 174188 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 actacatcatcatcaccatca 152 ||||||||||||||||||||| Sbjct: 11062 actacatcatcatcaccatca 11042
>ref|NM_130072.2| Arabidopsis thaliana cyclin-dependent protein kinase AT2G45080 mRNA, complete cds Length = 704 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acatcatcatcaccatcaat 154 |||||||||||||||||||| Sbjct: 653 acatcatcatcaccatcaat 672
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ccacatcctctggagagactccac 213 |||| ||||||||||||||||||| Sbjct: 70428 ccacttcctctggagagactccac 70405
>ref|XM_641134.1| Dictyostelium discoideum hypothetical protein (DDB0216691), partial mRNA Length = 3039 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acatcatcatcaccatcaat 154 |||||||||||||||||||| Sbjct: 556 acatcatcatcaccatcaat 575
>gb|AC169504.1| Mus musculus BAC clone RP23-416K3 from chromosome 17, complete sequence Length = 215554 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ctacatcatcatcaccatca 152 |||||||||||||||||||| Sbjct: 15711 ctacatcatcatcaccatca 15692
>gb|AC119889.13| Mus musculus chromosome 1, clone RP24-220M12, complete sequence Length = 153713 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 59298 catcatcatcaccatcaatc 59317
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tctcgacgaccaccacgtcc 306 |||||||||||||||||||| Sbjct: 36065 tctcgacgaccaccacgtcc 36084
>gb|AC117780.5| Mus musculus chromosome 16, clone RP24-540H15, complete sequence Length = 153703 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 caaaactacatcatcatcaccatc 151 |||||| ||||||||||||||||| Sbjct: 151235 caaaacaacatcatcatcaccatc 151212
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tctcgacgaccaccacgtcc 306 |||||||||||||||||||| Sbjct: 839910 tctcgacgaccaccacgtcc 839929
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ccacatcctctggagagactccac 213 |||| ||||||||||||||||||| Sbjct: 148108 ccacttcctctggagagactccac 148085
>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence Length = 194593 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 ctctcaaaacttggttcatg 174 |||||||||||||||||||| Sbjct: 46054 ctctcaaaacttggttcatg 46073
>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence Length = 174764 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 85920 catcatcatcaccatcaatc 85901
>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence Length = 214318 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 aacttggttcatgctaccaaaaat 185 |||||||||||||||| ||||||| Sbjct: 67422 aacttggttcatgctatcaaaaat 67399
>gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosome 12, complete sequence Length = 151046 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 51396 catcatcatcaccatcaatc 51415
>gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complete sequence Length = 173301 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 aaaactacatcatcatcaccatca 152 |||||||||||||||||| ||||| Sbjct: 145629 aaaactacatcatcatcatcatca 145652
>gb|AY232267.1| Dictyostelium discoideum putative protein Roco5 (roco5) gene, complete cds Length = 8880 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatctctcaaaa 163 |||||||||||||||||| | ||||||| Sbjct: 5222 catcatcatcaccatcaaccactcaaaa 5249
>emb|BX908811.1| Neurospora crassa DNA linkage group VI Cosmid contig H4H7 Length = 108058 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 atcatcatcaccatcaatct 156 |||||||||||||||||||| Sbjct: 84049 atcatcatcaccatcaatct 84030
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tctcgacgaccaccacgtcc 306 |||||||||||||||||||| Sbjct: 682326 tctcgacgaccaccacgtcc 682345
>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4 Length = 62070 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 53238 catcatcatcaccatcaatc 53219
>emb|AL808115.10| Mouse DNA sequence from clone RP23-224M8 on chromosome X, complete sequence Length = 163408 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 atcatcatcaccatcaatct 156 |||||||||||||||||||| Sbjct: 155608 atcatcatcaccatcaatct 155589
>gb|AC023644.6| Homo sapiens chromosome 8, clone RP11-257P3, complete sequence Length = 60057 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 59125 catcatcatcaccatcaatc 59144
>gb|AC163654.2| Mus musculus BAC clone RP23-259M14 from chromosome 16, complete sequence Length = 159273 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 71096 catcatcatcaccatcaatc 71077
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 357 caccaccttagtggggtcgatgat 380 ||||||||| |||||||||||||| Sbjct: 3516159 caccaccttggtggggtcgatgat 3516136
>gb|AC146331.35| Medicago truncatula clone mth2-7h18, complete sequence Length = 138838 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 caagaaatttccgctaaatgtttctctg 79 ||||||||||||||||||| || ||||| Sbjct: 37650 caagaaatttccgctaaattttgctctg 37623
>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence Length = 148726 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tttttcttatctcaaaacta 135 |||||||||||||||||||| Sbjct: 110055 tttttcttatctcaaaacta 110036
>gb|AY074650.1| Arabidopsis thaliana At2g45080/T14P1.11 mRNA, complete cds Length = 704 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acatcatcatcaccatcaat 154 |||||||||||||||||||| Sbjct: 653 acatcatcatcaccatcaat 672
>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence Length = 165948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 catcatcatcaccatcaatc 155 |||||||||||||||||||| Sbjct: 1069 catcatcatcaccatcaatc 1088
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence Length = 184457 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 ctccttgatctcgacgaccaccac 302 ||||||||||||| |||||||||| Sbjct: 73942 ctccttgatctcgccgaccaccac 73965
>gb|AC154383.2| Mus musculus BAC clone RP23-38N16 from chromosome 16, complete sequence Length = 205926 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 caaaactacatcatcatcaccatc 151 |||||| ||||||||||||||||| Sbjct: 30259 caaaacaacatcatcatcaccatc 30236
>gb|AF065610.1|AF065610 Toxoplasma gondii strain 76K heat shock protein 60 pseudogene, mRNA sequence Length = 2442 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 gtggggtcgatgataccagcagccatca 394 |||||||||||||| || |||||||||| Sbjct: 1633 gtggggtcgatgatgccggcagccatca 1606
>gb|AF065609.1|AF065609 Toxoplasma gondii strain 76K heat shock protein 60 mRNA, complete cds Length = 2430 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 gtggggtcgatgataccagcagccatca 394 |||||||||||||| || |||||||||| Sbjct: 1621 gtggggtcgatgatgccggcagccatca 1594
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgtcaggaaggtcttggcca 328 |||||||||||||||||||| Sbjct: 177375 cgtcaggaaggtcttggcca 177394
>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete sequence. Sequence from clones T13E15, T14P1 Length = 87885 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 acatcatcatcaccatcaat 154 |||||||||||||||||||| Sbjct: 58032 acatcatcatcaccatcaat 58051
>emb|BX284649.14| Mouse DNA sequence from clone RP23-42M7 on chromosome 2, complete sequence Length = 127220 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 aaaactacatcatcatcaccatca 152 |||||||||||||||||| ||||| Sbjct: 114436 aaaactacatcatcatcatcatca 114413
>dbj|AP000943.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867G2, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ctgttccaattacatcaaga 56 |||||||||||||||||||| Sbjct: 58924 ctgttccaattacatcaaga 58905
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 tctcgacgaccaccacgtcc 306 |||||||||||||||||||| Sbjct: 590826 tctcgacgaccaccacgtcc 590845
>emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on chromosome X, complete sequence Length = 162188 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ttaaaccacatcctctggag 204 |||||||||||||||||||| Sbjct: 5328 ttaaaccacatcctctggag 5347
>emb|AL627302.20| Mouse DNA sequence from clone RP23-272D10 on chromosome X, complete sequence Length = 191439 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 atctcaaaactacatcatca 143 |||||||||||||||||||| Sbjct: 140042 atctcaaaactacatcatca 140061 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,699,267 Number of Sequences: 3902068 Number of extensions: 4699267 Number of successful extensions: 110351 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109907 Number of HSP's gapped (non-prelim): 431 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
