ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61g18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 882 bits (445), Expect = 0.0 Identities = 463/472 (98%) Strand = Plus / Minus Query: 188 cgtncgngggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 247 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2854 cgtccgtgggatcaccgtccgacggcctgagcagcacatacggcaccatgccggcgccgt 2795 Query: 248 gtcggtttttccggtcggggtcgttgttccactcatncacctgctccacgatcttnctgg 307 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 2794 gtcggtttttccggtcggggtcgttgttccactcatccacctgctccacgatcttcctgg 2735 Query: 308 tgctctncttgaactcctcaaatgcctggttgatcaccccatnctttgtccatgccggct 367 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2734 tgctctccttgaactcctcaaatgcctggttgatcaccccatcctttgtccatgccggct 2675 Query: 368 cttngtgcgtgcccatgtactcctnatccgacgagtgcgtggacaagaggtccaagatgg 427 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2674 cttcgtgcgtgcccatgtactcctcatccgacgagtgcgtggacaagaggtccaagatgg 2615 Query: 428 caaggactatggcactctggtactgggacgggaacgtgtccagcagcaccttctccgggg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2614 caaggactatggcactctggtactgggacgggaacgtgtccagcagcaccttctccgggg 2555 Query: 488 cctccacaaagtcgcgcatgtcgtcgccgccaatctcggtcggcatgttnctccgggcca 547 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2554 cctccacaaagtcgcgcatgtcgtcgccgccaatctcggtcggcatgttcctccgggcca 2495 Query: 548 tggtcgggcggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgt 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2494 tggtcgggcggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgt 2435 Query: 608 gatgacccgacgtgacccacatgatggtcgccagggtctgcgccaggttctc 659 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2434 gatgacccgacgtgacccacatgatggtcgccagggtctgcgccaggttctc 2383 Score = 167 bits (84), Expect = 6e-38 Identities = 93/95 (97%), Gaps = 2/95 (2%) Strand = Plus / Minus Query: 22 cgtgtcctttaattataatttttggtgctcattcccattatacccaccgccgggccaaga 81 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3031 cgtgtcctttaattataattt--ggtgctcattcccattatacccaccgccgggccaaga 2974 Query: 82 gactgaagacactcttatttacgcctagttgagtt 116 ||||||||||||||||||||||||||||||||||| Sbjct: 2973 gactgaagacactcttatttacgcctagttgagtt 2939 Score = 129 bits (65), Expect = 1e-26 Identities = 71/74 (95%) Strand = Plus / Minus Query: 135 ggcagctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgn 194 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 2922 ggcagctcaaatggagatgctgttggggatgcccatctccatcaccatcttctcgtccgt 2863 Query: 195 gggatcaccgtccg 208 |||||||||||||| Sbjct: 2862 gggatcaccgtccg 2849
>emb|AJ507212.1|HVU507212 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:2 gene) Length = 3023 Score = 135 bits (68), Expect = 2e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 528 cggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtactg 587 ||||||||| |||||||| ||| ||||| |||| |||| |||||| |||||||||||||| Sbjct: 2507 cggcatgttcctccgggcaatgctcgggtggttcgggacgtacccagccatggggtactg 2448 Query: 588 cccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggtcgccagg 642 |||||||||||||||||| ||||| |||| ||||||||||||||||| |||||| Sbjct: 2447 cccgaagttgacggcggcatgatgtgccgaggtgacccacatgatggtggccagg 2393 Score = 81.8 bits (41), Expect = 3e-12 Identities = 206/264 (78%) Strand = Plus / Minus Query: 143 aaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggatcac 202 ||||||| |||||||| || |||||||||| ||||||| | || ||| | |||| || Sbjct: 2892 aaatggaaatgctgttcggaatgcccatctccatcaccgttttagcgtccatcggattac 2833 Query: 203 cgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtttttccggt 262 ||| | | |||||||||||||| |||||||| | |||||| ||||| |||||| ||||| Sbjct: 2832 cgttcaatggcctgagcagcacgtacggcactacgccggcaccgtggcggtttctccggc 2773 Query: 263 cggggtcgttgttccactcatncacctgctccacgatcttnctggtgctctncttgaact 322 | ||| ||||||||||| | ||||||||| |||| | || | ||| || ||| Sbjct: 2772 tgtcgtccttgttccactcttcgacctgctccgcgatgtctctcatcttcttctggaaaa 2713 Query: 323 cctcaaatgcctggttgatcaccccatnctttgtccatgccggctcttngtgcgtgccca 382 ||| ||| |||| || || | |||||| | || ||| |||||||| | ||||||||||| Sbjct: 2712 cctgaaacgccttgtcgacctccccatccctttgccaagccggctcctggtgcgtgccca 2653 Query: 383 tgtactcctnatccgacgagtgcg 406 ||||||||| ||||||| ||||| Sbjct: 2652 tgtactcctcgtccgacgcgtgcg 2629
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 79.8 bits (40), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctncatcacc 180 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccatctccatcacc 22970421 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 22888635 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22888694 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 22888695 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22888749 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Plus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 22889033 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 22889092 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 22889093 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 22889142 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 443 tctggtactgggacgggaacgtgtccagca 472 |||||||||| ||||||||||||||||||| Sbjct: 22970158 tctggtactgcgacgggaacgtgtccagca 22970129 Score = 46.1 bits (23), Expect = 0.15 Identities = 88/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | ||| || ||||| || ||||| |||| ||| ||||| ||||||| Sbjct: 22970066 gtcggcatgtttcgccgcgcgatggtgggacggttggggaagtagccggcgtaggggtac 22970007 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || |||||||| || || ||||| || ||||| | |||||| || ||||| Sbjct: 22970006 tggccgaagttcaccgctgcgtggtgccccgatgcgacccaaataatggt 22969957 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gtgcgtgcccatgtactcct 391 |||||||||||||||||||| Sbjct: 22970229 gtgcgtgcccatgtactcct 22970210
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 79.8 bits (40), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctncatcacc 180 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccatctccatcacc 22898612 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 22816826 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 22816885 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 22816886 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 22816940 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Plus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 22817224 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 22817283 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 22817284 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 22817333 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 443 tctggtactgggacgggaacgtgtccagca 472 |||||||||| ||||||||||||||||||| Sbjct: 22898349 tctggtactgcgacgggaacgtgtccagca 22898320 Score = 46.1 bits (23), Expect = 0.15 Identities = 88/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | ||| || ||||| || ||||| |||| ||| ||||| ||||||| Sbjct: 22898257 gtcggcatgtttcgccgcgcgatggtgggacggttggggaagtagccggcgtaggggtac 22898198 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || |||||||| || || ||||| || ||||| | |||||| || ||||| Sbjct: 22898197 tggccgaagttcaccgctgcgtggtgccccgatgcgacccaaataatggt 22898148 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gtgcgtgcccatgtactcct 391 |||||||||||||||||||| Sbjct: 22898420 gtgcgtgcccatgtactcct 22898401
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 79.8 bits (40), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 138 agctcaaatggagatgctgttggggatgcccatctncatcacc 180 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79740 agctcaaatggagatgctgttggggatgcccatctccatcacc 79698 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 443 tctggtactgggacgggaacgtgtccagca 472 |||||||||| ||||||||||||||||||| Sbjct: 79435 tctggtactgcgacgggaacgtgtccagca 79406 Score = 46.1 bits (23), Expect = 0.15 Identities = 88/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | ||| || ||||| || ||||| |||| ||| ||||| ||||||| Sbjct: 79343 gtcggcatgtttcgccgcgcgatggtgggacggttggggaagtagccggcgtaggggtac 79284 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || |||||||| || || ||||| || ||||| | |||||| || ||||| Sbjct: 79283 tggccgaagttcaccgctgcgtggtgccccgatgcgacccaaataatggt 79234 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gtgcgtgcccatgtactcct 391 |||||||||||||||||||| Sbjct: 79506 gtgcgtgcccatgtactcct 79487
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatg 633 ||||||| |||||||||||||||||||| || || |||||||||||||||||| Sbjct: 2346 ggtactgaccgaagttgacggcggcgtggtggccggacgtgacccacatgatg 2294 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 141 tcaaatggagatgctgttggggatgcc 167 ||||||||||||||||||||||||||| Sbjct: 2774 tcaaatggagatgctgttggggatgcc 2748 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 209 acggcctgagcagcacatacggcaccatgccggcgcc 245 ||||| |||||||| | |||||||| ||||||||||| Sbjct: 2721 acggcttgagcagctcgtacggcacgatgccggcgcc 2685
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 |||||||||||||||||||||||||||| || || || || |||||||||||||| Sbjct: 2453 ggtactgcccgaagttgacggcggcgtggtggccggaggtcacccacatgatggt 2399 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 209 acggcctgagcagcacatacggcaccatgccggcgccg 246 ||||| |||||||| | |||||||| |||||||||||| Sbjct: 2828 acggcttgagcagctcgtacggcacgatgccggcgccg 2791 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2882 ctcagatggagatgctgtttgggatgccc 2854
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 |||||||||||||||||||||||||||| || || || || |||||||||||||| Sbjct: 5277391 ggtactgcccgaagttgacggcggcgtggtggccggaggtcacccacatgatggt 5277445 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 209 acggcctgagcagcacatacggcaccatgccggcgccg 246 ||||| |||||||| | |||||||| |||||||||||| Sbjct: 5277016 acggcttgagcagctcgtacggcacgatgccggcgccg 5277053 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 5276962 ctcagatggagatgctgtttgggatgccc 5276990
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 |||||||||||||||||||||||||||| || || || || |||||||||||||| Sbjct: 3694 ggtactgcccgaagttgacggcggcgtggtggccggaggtcacccacatgatggt 3748 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Plus Query: 209 acggcctgagcagcacatacggcaccatgccggcgccg 246 ||||| |||||||| | |||||||| |||||||||||| Sbjct: 3319 acggcttgagcagctcgtacggcacgatgccggcgccg 3356 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 3265 ctcagatggagatgctgtttgggatgccc 3293
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 |||||||||||||||||||||||||||| || || || || |||||||||||||| Sbjct: 2452 ggtactgcccgaagttgacggcggcgtggtggccggaggtcacccacatgatggt 2398 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 209 acggcctgagcagcacatacggcaccatgccggcgccg 246 ||||| |||||||| | |||||||| |||||||||||| Sbjct: 2827 acggcttgagcagctcgtacggcacgatgccggcgccg 2790 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2881 ctcagatggagatgctgtttgggatgccc 2853
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Minus Query: 581 ggtactgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 |||||||||||||||||||||||||||| || || || || |||||||||||||| Sbjct: 1614 ggtactgcccgaagttgacggcggcgtggtggccggaggtcacccacatgatggt 1560 Score = 44.1 bits (22), Expect = 0.58 Identities = 34/38 (89%) Strand = Plus / Minus Query: 209 acggcctgagcagcacatacggcaccatgccggcgccg 246 ||||| |||||||| | |||||||| |||||||||||| Sbjct: 1989 acggcttgagcagctcgtacggcacgatgccggcgccg 1952 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||| ||||||||| Sbjct: 2043 ctcagatggagatgctgtttgggatgccc 2015
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgtg 608 ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 381 cggttcgggatgtacccggcgtacgggtactgcccgaagttgacggcggcgtg 329
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgtg 608 ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 376 cggttcgggatgtacccggcgtacgggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgtg 608 ||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 376 cggttcgggatgtacccggcgtacgggtactgcccgaagttgacggcggcgtg 324
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 548 tggtcgggcggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgt 607 ||||||| ||||| |||| ||| ||||| | | ||||||| |||||||||||||| | || Sbjct: 816 tggtcggccggttggggaagtagccggcgaagtggtactggccgaagttgacggccgagt 757 Query: 608 gatgacccgacgtgacccacatgatggt 635 | || || || ||||||||||||||||| Sbjct: 756 ggtggccggaggtgacccacatgatggt 729 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||| ||||||||||| Sbjct: 1210 atggagatgctgctggggatgccc 1187
>emb|AJ270938.1|OSA270938 Oryza sativa mRNA for lipoxygenase (rci-1 gene) Length = 3018 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 2817 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2758 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 2757 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2703 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 2419 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 2360 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 2359 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 2310
>dbj|AK072241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002P20, full insert sequence Length = 3080 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 2836 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2777 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 2776 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2722 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 2438 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 2379 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 2378 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 2329
>dbj|AK066737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079G10, full insert sequence Length = 2747 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 2343 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 2284 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 2283 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 2229 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 1945 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 1886 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 1885 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 1836
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 60.0 bits (30), Expect = 1e-05 Identities = 93/115 (80%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccatctncatcaccatcttctcgtncgngggat 199 ||||||| ||||||||||||||||| ||||||| |||||| | || || | || | Sbjct: 68209 ctcaaattgagatgctgttggggatacccatctccatcacggacgtcatgtccttagggt 68150 Query: 200 caccgtccgacggcctgagcagcacatacggcaccatgccggcgccgtgtcggtt 254 |||||| |||||| |||||||||| |||||||||| ||||| ||| || ||||| Sbjct: 68149 caccgtaggacggcttgagcagcacgtacggcaccacgccggggccctgccggtt 68095 Score = 54.0 bits (27), Expect = 6e-04 Identities = 89/110 (80%) Strand = Plus / Minus Query: 526 gtcggcatgttnctccgggccatggtcgggcggttagggatgtacccggccatggggtac 585 ||||||||||| | |||||| ||||| ||||| || |||| ||| ||||| ||||||| Sbjct: 67811 gtcggcatgttccgccgggcgatggtggggcgattggggaagtagccggcgtaggggtac 67752 Query: 586 tgcccgaagttgacggcggcgtgatgacccgacgtgacccacatgatggt 635 || || ||||| || || || || || ||||||| |||||| |||||||| Sbjct: 67751 tggccaaagttcaccgccgcatggtgccccgacgcgacccagatgatggt 67702
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 2174 gggtactgcccgaagttgacggcggcgtg 2146 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2609 atggagatgctgttggggatgccc 2586
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 30026010 gggtactgcccgaagttgacggcggcgtg 30025982 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 27821687 ctcagatggagatgctgttggggatgcccat 27821657 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 14300017 ctcaaatggtgatgctgttggggatgccc 14300045 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 30026445 atggagatgctgttggggatgccc 30026422 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 4174356 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 4174314 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 27803100 gagatgctgttggggatgccc 27803080 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 27761619 gggtactgcccgaaattgacggctgcgtg 27761591
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 2256 gggtactgcccgaagttgacggcggcgtg 2228 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2691 atggagatgctgttggggatgccc 2668
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 81741 gggtactgcccgaagttgacggcggcgtg 81769 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 81306 atggagatgctgttggggatgccc 81329
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 352 gggtactgcccgaagttgacggcggcgtg 324
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 30117432 gggtactgcccgaagttgacggcggcgtg 30117404 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 27913011 ctcagatggagatgctgttggggatgcccat 27912981 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 14294992 ctcaaatggtgatgctgttggggatgccc 14295020 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 30117867 atggagatgctgttggggatgccc 30117844 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 4174465 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 4174423 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 27894424 gagatgctgttggggatgccc 27894404 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 27852942 gggtactgcccgaaattgacggctgcgtg 27852914
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 552 cgggcggttagggatgtacccggccatggggtactgcccgaagttgacggcggcgtg 608 ||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2211 cgggcggttcgggaggtacccggcgtacgggtactgcccgaagttgacggccgcgtg 2155 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||||||||||||| || |||||| Sbjct: 2623 ctcaaatggagatgctgtttggaatgccc 2595
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||||| Sbjct: 2289 gggtactgcccgaagttgacggcggcgtg 2261 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2724 atggagatgctgttggggatgccc 2701
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3198 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 2545 gtactgcccgaagttgacggcggcgtg 2519
>ref|XM_483276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2775 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 2343 gtactgcccgaagttgacggcggcgtg 2317
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2447 ctcagatggagatgctgttggggatgcccat 2417
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2926 ctcagatggagatgctgttggggatgcccat 2896
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 65817 ctcagatggagatgctgttggggatgcccat 65787 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 47230 gagatgctgttggggatgccc 47210 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 5748 gggtactgcccgaaattgacggctgcgtg 5720
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2920 ctcagatggagatgctgttggggatgcccat 2890
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 25242143 gtactgcccgaagttgacggcggcgtg 25242117 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 25209886 gtactgcccgaagttgacggcggcgtg 25209912
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 107266 gtactgcccgaagttgacggcggcgtg 107240 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 75009 gtactgcccgaagttgacggcggcgtg 75035
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 17328 gtactgcccgaagttgacggcggcgtg 17302
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 1333 ctcagatggagatgctgttggggatgcccat 1303
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2598 ctcagatggagatgctgttggggatgcccat 2568
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 2928 ctcagatggagatgctgttggggatgcccat 2898
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgcccat 170 |||| |||||||||||||||||||||||||| Sbjct: 1498 ctcagatggagatgctgttggggatgcccat 1468
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full insert sequence Length = 3196 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 2543 gtactgcccgaagttgacggcggcgtg 2517
>gb|AY109573.1| Zea mays CL902_1 mRNA sequence Length = 2739 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 552 cgggcggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 2197 cgggcggttcgggacgtacccgcccagcgggtactgcccgaagttga 2151
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds Length = 2232 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 1620 gtactgcccgaagttgacggcggcgtg 1594
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds Length = 2664 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 2028 gtactgcccgaagttgacggcggcgtg 2002
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for lipoxygenase, complete cds Length = 3007 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 ||||||||||||||||||||||||||| Sbjct: 2458 gtactgcccgaagttgacggcggcgtg 2432
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 579 ggggtactgcccgaagttgacggcggcgtg 608 |||||||||||||||||||||||| ||||| Sbjct: 2220 ggggtactgcccgaagttgacggccgcgtg 2191
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 579 ggggtactgcccgaagttgacggcggcgtg 608 |||||||||||||||||||||||| ||||| Sbjct: 468 ggggtactgcccgaagttgacggccgcgtg 439 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 140 ctcaaatggagatgctgttggggatgccc 168 |||| |||||||||||||||||||||||| Sbjct: 907 ctcagatggagatgctgttggggatgccc 879
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 755 gctcagatggagatgctgttggggatgccc 726 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 ggggtactgcccgaagttgac 599 ||||||||||||||||||||| Sbjct: 315 ggggtactgcccgaagttgac 295
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 4664 gctcagatggagatgctgttggggatgccc 4635 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||| |||||||||||||||||||| Sbjct: 4223 gggtactggccgaagttgacggcggcgtg 4195
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 137 cagctcaaatggagatgctgttggggatgcccat 170 ||||||| ||||||| |||||||||||||||||| Sbjct: 2768 cagctcagatggagacgctgttggggatgcccat 2735
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgccc 168 ||||| |||||||||||||||||||||||| Sbjct: 2066 gctcagatggagatgctgttggggatgccc 2037 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||| |||||||||||||||||||| Sbjct: 1625 gggtactggccgaagttgacggcggcgtg 1597
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 49246 ctcaaatggtgatgctgttggggatgccc 49274
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 ctcaaatggagatgctgttggggatgccc 168 ||||||||| ||||||||||||||||||| Sbjct: 111405 ctcaaatggtgatgctgttggggatgccc 111433
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||| |||||||||||||||||||| Sbjct: 2156 gggtactggccgaagttgacggcggcgtg 2128 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2591 atggagatgctgttggggatgccc 2568
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 1082 atggagatgctgttggggatgccc 1059 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 ggggtactgcccgaagttgac 599 ||||||||||||||||||||| Sbjct: 648 ggggtactgcccgaagttgac 628
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgcccat 170 ||||| ||||||||||||||||| |||||||| Sbjct: 369 gctcatatggagatgctgttgggaatgcccat 338
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 139 gctcaaatggagatgctgttggggatgcccat 170 ||||| ||||||||||||||||| |||||||| Sbjct: 2902 gctcatatggagatgctgttgggaatgcccat 2871
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgccc 1529
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||||||||||||||| Sbjct: 2653 atggagatgctgttggggatgccc 2630 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 ggggtactgcccgaagttgac 599 ||||||||||||||||||||| Sbjct: 2219 ggggtactgcccgaagttgac 2199
>ref|XM_470535.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2718 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 2306 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 2264
>gb|AC136525.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0585E02, complete sequence Length = 138677 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 |||||| |||||||||||||||||||| Sbjct: 35500 gtactggccgaagttgacggcggcgtg 35474
>gb|AC145476.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1023E01, complete sequence Length = 140322 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 |||||| |||||||||||||||||||| Sbjct: 62273 gtactggccgaagttgacggcggcgtg 62247
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 |||||| |||||||||||||||||||| Sbjct: 13606365 gtactggccgaagttgacggcggcgtg 13606339
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 74993 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 74951
>dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A07, full insert sequence Length = 1212 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 710 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 668
>dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052A03, full insert sequence Length = 3067 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 2545 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 2503
>dbj|AK064795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C19, full insert sequence Length = 3008 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 |||||| |||||||||||||||||||| Sbjct: 2358 gtactggccgaagttgacggcggcgtg 2332
>dbj|AK060791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E01, full insert sequence Length = 2282 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 582 gtactgcccgaagttgacggcggcgtg 608 |||||| |||||||||||||||||||| Sbjct: 1657 gtactggccgaagttgacggcggcgtg 1631
>gb|AY106500.1| Zea mays PCO061066 mRNA sequence Length = 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Plus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||||||| ||| ||| ||||||||||||||||||| Sbjct: 243 cggttcgggatgtagccgcccagcgggtactgcccgaagttga 285
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 46.1 bits (23), Expect = 0.15 Identities = 38/43 (88%) Strand = Plus / Minus Query: 556 cggttagggatgtacccggccatggggtactgcccgaagttga 598 ||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 2971 cggttcgggacgtacccgcccagcgggtactgcccgaagttga 2929
>gb|AY659085.1| Synthetic construct Peudomonas aeruginosa clone FLH038080.01F PA2304 gene, partial cds Length = 1089 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 630 gatggtcgccagggtctgcgcc 651 |||||||||||||||||||||| Sbjct: 882 gatggtcgccagggtctgcgcc 861
>ref|XM_587703.2| PREDICTED: Bos taurus similar to ZK742.2 (LOC510550), mRNA Length = 2214 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 476 ccttctccggggcctccacaaagtcg 501 ||||||||||| |||||||||||||| Sbjct: 1333 ccttctccgggacctccacaaagtcg 1308
>gb|AE004656.1| Pseudomonas aeruginosa PAO1, section 217 of 529 of the complete genome Length = 13104 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 630 gatggtcgccagggtctgcgcc 651 |||||||||||||||||||||| Sbjct: 8367 gatggtcgccagggtctgcgcc 8388
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||||||||| || ||||| Sbjct: 430 gggtactgcccgaagttgaccgccgcgtg 458
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 2594 gagatgctgttggggatgccc 2574
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 2153 gggtactgcccgaaattgacggctgcgtg 2125
>emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chromosome 1 Contains part of the CSMD2 gene for CUB and Sushi multiple domains 2, complete sequence Length = 114784 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 gtgtcctttaattataatttt 43 ||||||||||||||||||||| Sbjct: 67048 gtgtcctttaattataatttt 67028
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 52275 gggtactgcccgaaattgacggctgcgtg 52303 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gagatgctgttggggatgccc 168 ||||||||||||||||||||| Sbjct: 10793 gagatgctgttggggatgccc 10813
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 2219 gggtactgcccgaaattgacggctgcgtg 2191
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 |||||||||||||| |||||||| ||||| Sbjct: 2227 gggtactgcccgaaattgacggctgcgtg 2199
>emb|AJ331647.1|HSA331647 Homo sapiens genomic sequence surrounding NotI site, clone NR3-AL4R Length = 749 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccagcagcaccttctccggggcctc 491 ||||||| ||||||||||||||||| Sbjct: 47 ccagcaggaccttctccggggcctc 71
>emb|AJ324356.1|HSA324356 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DO11R Length = 872 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 ccagcagcaccttctccggggcctc 491 ||||||| ||||||||||||||||| Sbjct: 47 ccagcaggaccttctccggggcctc 71
>gb|AY098520.1| Ananas comosus lipoxygenase I mRNA, partial cds Length = 1143 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||| ||||||||||| ||||| Sbjct: 577 gggtactgcccaaagttgacggccgcgtg 549
>gb|AY098518.1| Ananas comosus lipoxygenase III mRNA, partial cds Length = 524 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 gggtactgcccgaagttgacggcggcgtg 608 ||||||||||| ||||||||||| ||||| Sbjct: 85 gggtactgcccaaagttgacggccgcgtg 57
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 cgaagttgacggcggcgtga 609 |||||||||||||||||||| Sbjct: 814762 cgaagttgacggcggcgtga 814781
>ref|NM_004745.3| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2), mRNA Length = 10101 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 321 acgtgtccagcagcaccttc 340
>ref|XM_600714.2| PREDICTED: Bos taurus similar to discs large-associated protein 2 (LOC522433), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 227 acgtgtccagcagcaccttc 246
>ref|XM_854998.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5B, transcript variant 4 (LOC490969), mRNA Length = 2640 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854961.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5B, transcript variant 3 (LOC490969), mRNA Length = 2814 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854922.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5B, transcript variant 2 (LOC490969), mRNA Length = 2787 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_548092.2| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5B, transcript variant 1 (LOC490969), mRNA Length = 2797 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 453 aactcctcaaatgtctggttgatc 430
>ref|XM_854847.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 8 (LOC490968), mRNA Length = 2773 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854813.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 7 (LOC490968), mRNA Length = 2749 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854777.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 6 (LOC490968), mRNA Length = 2755 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854742.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 5 (LOC490968), mRNA Length = 2644 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854710.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 4 (LOC490968), mRNA Length = 2740 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_854676.1| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 3 (LOC490968), mRNA Length = 2557 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>ref|XM_548091.2| PREDICTED: Canis familiaris similar to Signal transducer and activator of transcription 5A, transcript variant 1 (LOC490968), mRNA Length = 2737 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 319 aactcctcaaatgcctggttgatc 342 ||||||||||||| |||||||||| Sbjct: 452 aactcctcaaatgtctggttgatc 429
>gb|AF181898.6| Homo sapiens chromosome 8 clone GS1-402E12 map p23, complete sequence Length = 261151 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 125781 acgtgtccagcagcaccttc 125800
>gb|AF074878.2| Burkholderia pseudomallei putative type III secretion system-associated gene cluster, complete sequence Length = 29814 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 cacaaagtcgcgcatgtcgt 511 |||||||||||||||||||| Sbjct: 460 cacaaagtcgcgcatgtcgt 441
>gb|AF119818.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2) mRNA, alternatively spliced, partial cds Length = 10141 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 358 acgtgtccagcagcaccttc 377
>gb|AF119817.1| Homo sapiens discs, large (Drosophila) homolog-associated protein 2 (DLGAP2) mRNA, alternatively spliced, complete cds Length = 10126 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 343 acgtgtccagcagcaccttc 362
>gb|AC005010.2| Homo sapiens BAC clone GS1-110L19 from 8, complete sequence Length = 197498 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 159511 acgtgtccagcagcaccttc 159530
>gb|AF009204.1|AF009204 Homo sapiens PSD-95/SAP90-associated protein-2 mRNA, partial cds Length = 3412 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 acgtgtccagcagcaccttc 480 |||||||||||||||||||| Sbjct: 171 acgtgtccagcagcaccttc 190
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 atggagatgctgttggggatgccc 168 |||||||||||| ||||||||||| Sbjct: 138 atggagatgctgctggggatgccc 161
>emb|CR753890.27| Zebrafish DNA sequence from clone CH211-207D8 in linkage group 9, complete sequence Length = 201771 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tgtcctttaattataatttt 43 |||||||||||||||||||| Sbjct: 125206 tgtcctttaattataatttt 125225 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,628,067 Number of Sequences: 3902068 Number of extensions: 3628067 Number of successful extensions: 66912 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66290 Number of HSP's gapped (non-prelim): 618 length of query: 659 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 636 effective length of database: 17,143,297,704 effective search space: 10903137339744 effective search space used: 10903137339744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
