ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR pro... 76 8e-14
2Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915 55 2e-07
3LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP1... 45 2e-04
4YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I 38 0.019
5RS4_LEPIN (Q9XD10) 30S ribosomal protein S4 37 0.032
6RS4_LEPIC (Q72NI7) 30S ribosomal protein S4 37 0.032
7SECA_MYCGE (P47318) Preprotein translocase secA subunit 34 0.27
8RS4_PHOLL (Q7MYH4) 30S ribosomal protein S4 34 0.36
9RS4_IDILO (Q5QXV7) 30S ribosomal protein S4 33 0.47
10PT309_YEAST (P32522) Protein PET309, mitochondrial precursor 33 0.47
11RS4_VIBF1 (Q5E890) 30S ribosomal protein S4 33 0.80
12RS4_YERPS (Q664U5) 30S ribosomal protein S4 32 1.0
13RS4_YERPE (Q8ZJ88) 30S ribosomal protein S4 32 1.0
14SECA_MYCPN (P75559) Preprotein translocase secA subunit 32 1.4
15TOP1_HELPY (P55991) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 32 1.4
16TOP1_HELPJ (Q9ZMV7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 32 1.4
17RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4 32 1.4
18PMYT1_CAEEL (O18209) Membrane-associated tyrosine- and threonine... 32 1.8
19ARGB_THETN (Q8R7C0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin... 32 1.8
20RS4_SHISS (Q3YWW3) 30S ribosomal protein S4 32 1.8
21RS4_SHIDS (Q32B55) 30S ribosomal protein S4 32 1.8
22RS4_SHIBS (Q31VY0) 30S ribosomal protein S4 32 1.8
23RS4_SALTI (Q8Z1X4) 30S ribosomal protein S4 32 1.8
24RS4_SALPA (Q5PK09) 30S ribosomal protein S4 32 1.8
25RS4_SALCH (Q57J55) 30S ribosomal protein S4 32 1.8
26RS4_PASMU (Q9CL53) 30S ribosomal protein S4 32 1.8
27RS4_SALTY (O54297) 30S ribosomal protein S4 32 1.8
28RS4_ECOLI (P0A7V8) 30S ribosomal protein S4 32 1.8
29RS4_ECOL6 (P0A7V9) 30S ribosomal protein S4 32 1.8
30RS4_ECO57 (P0A7W0) 30S ribosomal protein S4 32 1.8
31PTCD1_PONPY (Q5R655) Pentatricopeptide repeat protein 1 31 2.3
32SRP72_SCHMA (P49965) Signal recognition particle 72 kDa protein ... 31 2.3
33RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4 31 2.3
34RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4 31 2.3
35RS4_HAEIN (P44373) 30S ribosomal protein S4 31 2.3
36CI055_HUMAN (Q5VZ89) Protein C9orf55 31 3.0
37TOP1_BACAN (P40114) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 31 3.0
38RS4_PSEAE (O52759) 30S ribosomal protein S4 31 3.0
39TKTN_METJA (Q58094) Putative transketolase N-terminal section (E... 30 4.0
40RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4 30 4.0
41AEP3_CANGA (Q6FKT1) ATPase expression protein 3 30 4.0
42RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p... 30 5.2
43RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4 30 5.2
44RS4_VIBVU (Q8DE62) 30S ribosomal protein S4 30 5.2
45RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4 30 5.2
46RS4_SHEON (P59131) 30S ribosomal protein S4 30 5.2
47SYA_HELHP (Q7VHV4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 30 5.2
48IFIT5_HUMAN (Q13325) Interferon-induced protein with tetratricop... 30 5.2
49Y213_MYCPN (P75556) Hypothetical protein MG075 homolog (G07_orf1... 30 6.7
50TEKT3_MOUSE (Q6X6Z7) Tektin-3 30 6.7
51RS4_MANSM (Q65QX9) 30S ribosomal protein S4 30 6.7
52RS4_COXBU (Q83EQ3) 30S ribosomal protein S4 30 6.7
53MOAP1_MACFA (Q95KI4) Modulator of apoptosis 1 (MAP-1) 29 8.8
54MOAP1_HUMAN (Q96BY2) Modulator of apoptosis 1 (MAP-1) (MAP1) (Pa... 29 8.8
55S6A12_CANFA (P27799) Sodium- and chloride-dependent betaine tran... 29 8.8
56RS4_NEIMB (P66561) 30S ribosomal protein S4 29 8.8
57RS4_NEIMA (P66560) 30S ribosomal protein S4 29 8.8
58RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4 29 8.8
59YBBD_BACSU (P40406) Hypothetical lipoprotein ybbD precursor (ORF1) 29 8.8

>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 43/148 (29%), Positives = 72/148 (48%)
 Frame = -2

Query: 585 YTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFG 406
           Y +L+         E+  E    M D  +    + F+ ++D   K G  +++  +     
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 405 KIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFS 226
           +IG+ P  +TYN L+N Y   G+  +  +LL  M ++ LKP++VTYSTLI  Y ++    
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 225 RAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
            A    K+M  +G  PD  +Y  +L  L
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGL 591



 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 43/154 (27%), Positives = 74/154 (48%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           +YT +++ F + G+++K   T+  M D  +    VT++ ++  L K     +A +V+   
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
            K G+ P  MTYN +++ Y   GQ  +    LK+M +  ++PD VTYS L+    +    
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 228 SRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
             A      M + G  P+  +Y  LL     K A
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 46/155 (29%), Positives = 75/155 (48%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY ++L  +  +G  ++ +   K M  + V    VT+ +++D L K+G  ++AR +    
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
            K GL P   TY  L+  YA  G   ++  LL  M    + PD   +S LI AYA+    
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 228 SRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAR 124
            +A     +M + G  P+A +Y  ++  L  KS R
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGIL-CKSGR 421



 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 37/147 (25%), Positives = 73/147 (49%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY A++ I  ++G  E  M  ++ M DE +    + ++ ++ GL     + +A ++I E 
Sbjct: 408 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 467

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
              G+    + +N +++++ K G+  +  +L + M  + +KP+ +TY+TLI  Y      
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 228 SRAFYYHKQMVRNGQVPDAKSYRKLLN 148
             A      MV  G  P+  +Y  L+N
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLIN 554



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 39/149 (26%), Positives = 68/149 (45%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY+ L+D   + G   +  + + SMT   +     T+  +L G A  G  V+   ++   
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
            + G+ P    ++IL+ AYAK G+  +   +  +M    L P++VTY  +I    +    
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422

Query: 228 SRAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
             A  Y +QM+  G  P    Y  L++ L
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451



 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 26/84 (30%), Positives = 43/84 (51%)
 Frame = -2

Query: 399 GLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRA 220
           G PP  ++Y  ++N + K G   K      EM    + PD VTY+++I A  + +   +A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250

Query: 219 FYYHKQMVRNGQVPDAKSYRKLLN 148
                 MV+NG +PD  +Y  +L+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILH 274



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTR---VTFHMVLDGLAKHGLFVQARDVI 418
           +Y  LL        +++ +E    M D++ G +    V++  V++G  K G   +A    
Sbjct: 160 SYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTY 219

Query: 417 CEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARV 238
            E    G+ P  +TYN ++ A  K     K  ++L  M    + PD +TY+++++ Y   
Sbjct: 220 HEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279

Query: 237 RDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
                A  + K+M  +G  PD  +Y  L++ L
Sbjct: 280 GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 31/148 (20%), Positives = 70/148 (47%)
 Frame = -2

Query: 585 YTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFG 406
           + +++D   + G   +  + ++ M    V    +T++ +++G    G   +A  ++    
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538

Query: 405 KIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFS 226
            +GL P  +TY+ L+N Y K  +      L KEM +  + PD +TY+ ++    + R  +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598

Query: 225 RAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
            A   + ++  +G   +  +Y  +L+ L
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGL 626



 Score = 35.8 bits (81), Expect = 0.094
 Identities = 28/126 (22%), Positives = 54/126 (42%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY  +L    +   T+  ++ ++++    +     TF++++D L K G   +A+D+   F
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
              GL P   TY ++       G   +L QL   M       DS   + ++    +  + 
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737

Query: 228 SRAFYY 211
           +RA  Y
Sbjct: 738 TRAGTY 743



 Score = 35.8 bits (81), Expect = 0.094
 Identities = 27/160 (16%), Positives = 66/160 (41%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY  L++ +  AG  ++ M+    M    +    VT+  +++G  K      A  +  E 
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
              G+ P  +TYNI++    +  +     +L   ++    + +  TY+ +++   + +  
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632

Query: 228 SRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSARENIKD 109
             A    + +       +A+++  +++ L      +  KD
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672



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>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915|
          Length = 463

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = -2

Query: 483 TFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEM 304
           T++++LD L K G    A ++  E  +    P  MTYNIL+N   K  +      +L E+
Sbjct: 156 TYNVLLDALCKCGYIDNALELFKEM-QSRFKPELMTYNILINGLCKSRRVGTAKWMLTEL 214

Query: 303 STLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAR 124
                 P++VTY+T++  Y + R   R      +M R G   D  +Y  +++ L +K+ R
Sbjct: 215 KKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSAL-IKTGR 273



 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY  L+  + R    E+     + M D  +     T++ ++ G A+  +      +  E 
Sbjct: 50  TYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEM 109

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLL-KEMSTLELKPDSVTYSTLIYAYARVRD 232
            + G+ P   +YN LM  Y K G+H +  ++L K++    L P   TY+ L+ A  +   
Sbjct: 110 LEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGY 169

Query: 231 FSRAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
              A    K+M ++   P+  +Y  L+N L
Sbjct: 170 IDNALELFKEM-QSRFKPELMTYNILINGL 198



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 29/123 (23%), Positives = 53/123 (43%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TYT +L ++ +     + ++ +  M  E        +  V+  L K G   +A + + E 
Sbjct: 225 TYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQEL 284

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
            + G     ++YN L+N Y K G    +  LL E+    +K D  T++ ++    R    
Sbjct: 285 VRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQT 344

Query: 228 SRA 220
            RA
Sbjct: 345 RRA 347



 Score = 37.7 bits (86), Expect = 0.025
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
 Frame = -2

Query: 486 VTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKE 307
           VT++ ++ G  +     +A  V       G+ P   TYN L+   A+      +  L  E
Sbjct: 49  VTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDE 108

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAF-YYHKQMVRNGQVPDAKSYRKLLNTL 142
           M    + PD  +Y+TL+  Y ++     AF   +K +   G  P   +Y  LL+ L
Sbjct: 109 MLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDAL 164



 Score = 37.7 bits (86), Expect = 0.025
 Identities = 23/74 (31%), Positives = 36/74 (48%)
 Frame = -2

Query: 372 NILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVR 193
           NI +++  K  +  K   L+ +   L + PD VTY+TLI  Y R      A+   ++M  
Sbjct: 17  NICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRD 76

Query: 192 NGQVPDAKSYRKLL 151
            G  PD  +Y  L+
Sbjct: 77  AGIRPDVATYNSLI 90



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>LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)|
           (Leucine-rich PPR motif-containing protein)
          Length = 1273

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           TY  L+  +   G+ E   +    M  + +  T   F  ++ G A+ G    A +++   
Sbjct: 78  TYQRLIASYCNVGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVM 137

Query: 408 GKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDF 229
              G+ P   TY  L+NAYA+ G    + Q L+++   EL         +I+++++    
Sbjct: 138 RDAGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGYL 197

Query: 228 SRAFYYHKQMV-RNGQVPDAKSYRKLLNT 145
           S +  + K+       +PDA +   LL T
Sbjct: 198 SMSQKFWKKFTCERRYIPDAMNLILLLVT 226



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -2

Query: 405 KIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFS 226
           K+G       YN L+  Y +    +     L +M    ++P+ VTY  LI +Y  V D  
Sbjct: 34  KLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIE 93

Query: 225 RA 220
            A
Sbjct: 94  GA 95



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>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I|
          Length = 1261

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
 Frame = -2

Query: 588  TYTALLDIFRRAGNTEKLMETWKSMTDEK---VGCTRVTFHMVLDGLAKHGLFVQARDVI 418
            T+  L++   R G+T+          + K   V  +   ++ VL  L +     +   + 
Sbjct: 890  TFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLF 949

Query: 417  CEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTL-ELKPDSVTYSTLI-YAYA 244
             E  + GL PT++TY  ++NA  + G      +L  EM      +P    Y+T+I +   
Sbjct: 950  QEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQ 1009

Query: 243  RVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLN 148
             + +  +A +Y+ ++      P + +Y+ L++
Sbjct: 1010 TMFNREKALFYYNRLCATDIEPSSHTYKLLMD 1041



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>RS4_LEPIN (Q9XD10) 30S ribosomal protein S4|
          Length = 207

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 28/81 (34%), Positives = 39/81 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +A  R  +R F  H+ ++ NG+  D  SYR  LN  D    
Sbjct: 91  LQLLERRLDNVVYRL---GFAITRRQARNFIAHRHILVNGERVDIPSYR--LNVGDKVEI 145

Query: 126 RENIKDKSAIAGVVKGKSSLK 64
           RE  K  S IA  +K   SL+
Sbjct: 146 REKFKTSSFIADNIKLSQSLQ 166



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>RS4_LEPIC (Q72NI7) 30S ribosomal protein S4|
          Length = 207

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 28/81 (34%), Positives = 39/81 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +A  R  +R F  H+ ++ NG+  D  SYR  LN  D    
Sbjct: 91  LQLLERRLDNVVYRL---GFAITRRQARNFIAHRHILVNGERVDIPSYR--LNVGDKVEI 145

Query: 126 RENIKDKSAIAGVVKGKSSLK 64
           RE  K  S IA  +K   SL+
Sbjct: 146 REKFKTSSFIADNIKLSQSLQ 166



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>SECA_MYCGE (P47318) Preprotein translocase secA subunit|
          Length = 806

 Score = 34.3 bits (77), Expect = 0.27
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
 Frame = -2

Query: 480 FHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILM-NAYAKGGQHYKLPQLLKEM 304
           FH +++GL    +F Q ++ I   GK+ L     T  IL   +Y+ G     L Q ++  
Sbjct: 288 FHKIMNGLTAVKVFEQGKEYIVRDGKV-LIVDHFTGRILEGRSYSNG-----LQQAVQAK 341

Query: 303 STLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLN--TLDVKS 130
             +E++P++V  +T+ Y     + F R  Y     V    + +++ + K+ N   + V +
Sbjct: 342 EYVEIEPENVIVATITY-----QSFFR-LYNRLAAVSGTALTESEEFLKIYNMVVVPVPT 395

Query: 129 ARENI-KDKS 103
            R NI KD+S
Sbjct: 396 NRPNIRKDRS 405



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>RS4_PHOLL (Q7MYH4) 30S ribosomal protein S4|
          Length = 206

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 29/86 (33%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +S LE + D+V Y      +   R  SR    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LSLLEGRLDNVVYRM---GFGATRAESRQMVSHKAIMVNGRVVNIASYQVSPN--DVVSV 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S I    K    L  ++EK
Sbjct: 146 REKSKKQSRI----KAALELAEQREK 167



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>RS4_IDILO (Q5QXV7) 30S ribosomal protein S4|
          Length = 206

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +A  R  +R    HK +V NGQV +  S++  +   DV S 
Sbjct: 91  LQLLEQRLDNVVYRM---GFASTRAEARQLVSHKAVVVNGQVVNIPSFK--VRPEDVVSV 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K ++ I   ++    L  ++EK
Sbjct: 146 REKAKKQARIGAALE----LAEQREK 167



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>PT309_YEAST (P32522) Protein PET309, mitochondrial precursor|
          Length = 965

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 20/84 (23%), Positives = 39/84 (46%)
 Frame = -2

Query: 402 IGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSR 223
           IG  P+   Y ILM   A+ G+   + +L  ++    + P      +L+YA+ +V DF+ 
Sbjct: 340 IGKLPSIQHYGILMYTMARIGELDSVNKLYTQLLRRGMIPTYAVLQSLLYAHYKVGDFAA 399

Query: 222 AFYYHKQMVRNGQVPDAKSYRKLL 151
            F + +   +    P   ++  +L
Sbjct: 400 CFSHFELFKKYDITPSTATHTIML 423



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>RS4_VIBF1 (Q5E890) 30S ribosomal protein S4|
          Length = 206

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 23/75 (30%), Positives = 36/75 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  SR    HK ++ NG+V +  S++   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAESRQLVSHKSILVNGKVVNVPSFKVAAN--DVVSI 145

Query: 126 RENIKDKSAIAGVVK 82
           RE  K +S I   ++
Sbjct: 146 REKAKQQSRIKAALE 160



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>RS4_YERPS (Q664U5) 30S ribosomal protein S4|
          Length = 206

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 28/86 (32%), Positives = 40/86 (46%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  SR    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAESRQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_YERPE (Q8ZJ88) 30S ribosomal protein S4|
          Length = 206

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 28/86 (32%), Positives = 40/86 (46%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  SR    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAESRQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>SECA_MYCPN (P75559) Preprotein translocase secA subunit|
          Length = 808

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
 Frame = -2

Query: 480 FHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMS 301
           FH +++ L    +F Q ++ I   GK+ L     T  IL       G H    Q ++   
Sbjct: 288 FHKIINALTAVKVFEQGKEYIVRDGKV-LIVDHFTGRILEGRSYSNGLH----QAVQAKE 342

Query: 300 TLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLN--TLDVKSA 127
            +E++P++V  +T+ Y     + F R  Y     V      +++ + K+ N   + V + 
Sbjct: 343 MVEIEPENVIVATITY-----QSFFR-LYNRLSAVSGTAFTESEEFLKIYNMVVVPVPTN 396

Query: 126 RENIKDKSA 100
           R NI+   A
Sbjct: 397 RPNIRKDRA 405



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>TOP1_HELPY (P55991) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 736

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
 Frame = -2

Query: 498 GCTRVTFHMVLDGL--AKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKL 325
           G   V  +M  D L  AK  L      ++ ++GK  LPP A  Y+       +  +  + 
Sbjct: 290 GVMGVITYMRTDSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRP 349

Query: 324 PQLLKEMSTLE--LKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKS----- 166
             ++ E + L+  LKP+ +   TLIY          A +  + +V   +  + K+     
Sbjct: 350 TSIILEPNALKDYLKPEELRLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKL 409

Query: 165 ----YRKLLNTLDVKSARENIKDKSAI 97
               Y K+L   D      N+K+   I
Sbjct: 410 LFDGYYKILGNDDKDKLLPNLKENDPI 436



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>TOP1_HELPJ (Q9ZMV7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 736

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
 Frame = -2

Query: 498 GCTRVTFHMVLDGL--AKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKL 325
           G   V  +M  D L  AK  L      ++ ++GK  LPP A  Y+       +  +  + 
Sbjct: 290 GVMGVITYMRTDSLNIAKEALEEARAKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRP 349

Query: 324 PQLLKEMSTLE--LKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAK-SYRKL 154
             ++ E + L+  LKP+ +   TLIY          A +  + +V   +  + K S RKL
Sbjct: 350 TSIILEPNALKDYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKL 409

Query: 153 LNTLDVKSARENIKDK 106
           L     K    + KDK
Sbjct: 410 LFDGHYKILGNDDKDK 425



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>RS4_CHRVO (Q7NQH6) 30S ribosomal protein S4|
          Length = 206

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK +V NGQV +  SY+  +   DV S 
Sbjct: 91  LKLLESRLDNVVYRM---GFGSTRAEARQLVSHKAIVVNGQVVNIPSYQ--VKAGDVVSV 145

Query: 126 RENIKDKSAI 97
           RE  K ++ I
Sbjct: 146 REKAKKQARI 155



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>PMYT1_CAEEL (O18209) Membrane-associated tyrosine- and threonine-specific|
           cdc2-inhibitory kinase (EC 2.7.11.1) (Myt1 kinase)
           (Lethal protein 37)
          Length = 677

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/100 (27%), Positives = 47/100 (47%)
 Frame = -2

Query: 474 MVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTL 295
           M+ D +    +F+  +D+IC+ G  GL       N + +A  +G   Y  P++L    T 
Sbjct: 224 MIHDDIKPENIFL-TKDMICKLGDFGLVINLKNPNDVKSA-EEGDSKYLAPEVLNGRPTK 281

Query: 294 ELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPD 175
                S+   T++ A   +   S    +H+  +RNGQ+PD
Sbjct: 282 SSDIFSLGM-TILEATTDLDVPSNGDSWHQ--IRNGQIPD 318



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>ARGB_THETN (Q8R7C0) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 299

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = -2

Query: 189 GQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGVVKGKSSLKHRKEKKDEFGRTVKRGXX 10
           G++ +A    KL+   DV+   EN++DK+++      +  L+H K+  D  GR +  G  
Sbjct: 194 GKIAEALKAEKLILLTDVEGVLENVEDKTSLI----SRMDLEHAKKLMDS-GR-INGGMI 247

Query: 9   PKL 1
           PKL
Sbjct: 248 PKL 250



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>RS4_SHISS (Q3YWW3) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_SHIDS (Q32B55) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_SHIBS (Q31VY0) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_SALTI (Q8Z1X4) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_SALPA (Q5PK09) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_SALCH (Q57J55) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 91  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 145

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 146 REKAKKQSR----VKAALELAEQREK 167



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>RS4_PASMU (Q9CL53) 30S ribosomal protein S4|
          Length = 206

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -2

Query: 297 LELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAREN 118
           LE + D+V Y      +A  R  +R    HK +V NG+V +  S++  +N  DV + RE 
Sbjct: 94  LEGRLDNVVYRM---GFAATRAEARQLVSHKAIVVNGRVVNIPSFQVSVN--DVVAVREK 148

Query: 117 IKDKSAIAGVVKGKSSLKHRKEK 49
            K ++ I    K    L  ++EK
Sbjct: 149 SKKQARI----KASLELAEQREK 167



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>RS4_SALTY (O54297) 30S ribosomal protein S4|
          Length = 205

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 90  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 144

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 145 REKAKKQSR----VKAALELAEQREK 166



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>RS4_ECOLI (P0A7V8) 30S ribosomal protein S4|
          Length = 205

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 90  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 144

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 145 REKAKKQSR----VKAALELAEQREK 166



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>RS4_ECOL6 (P0A7V9) 30S ribosomal protein S4|
          Length = 205

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 90  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 144

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 145 REKAKKQSR----VKAALELAEQREK 166



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>RS4_ECO57 (P0A7W0) 30S ribosomal protein S4|
          Length = 205

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/86 (31%), Positives = 41/86 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  +R    HK ++ NG+V +  SY+   N  DV S 
Sbjct: 90  LALLEGRLDNVVYRM---GFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPN--DVVSI 144

Query: 126 RENIKDKSAIAGVVKGKSSLKHRKEK 49
           RE  K +S     VK    L  ++EK
Sbjct: 145 REKAKKQSR----VKAALELAEQREK 166



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>PTCD1_PONPY (Q5R655) Pentatricopeptide repeat protein 1|
          Length = 698

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
 Frame = -2

Query: 588 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 409
           T T L ++       E L+     + + +V      F+ ++   +K G    A+ ++   
Sbjct: 487 TLTLLAEVVESGSPAESLLLAL--LDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVL 544

Query: 408 GKIGLPPTAMTY-NILMNAYA-KGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVR 235
            K GL P   T+ N+ +  +  K G      QLL +M   ++ P+S  YS LI A  R  
Sbjct: 545 AKRGLVPNLQTFCNLAIGCHRPKDGL-----QLLTDMKKSQVTPNSHIYSALINAAVRKL 599

Query: 234 DFSRAFYYHKQMVRN 190
           +++      K M +N
Sbjct: 600 NYTYLINILKDMKQN 614



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>SRP72_SCHMA (P49965) Signal recognition particle 72 kDa protein (SRP72)|
          Length = 707

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
 Frame = -2

Query: 390 PTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKP--DSVTYSTLIYAYARVRDFSRAF 217
           PT  ++ I   AY +    Y+L +L +   TLE +   DS           R  DF+ A+
Sbjct: 70  PTLSSHVIFEKAYVE----YRLNRLTEAAKTLESEEASDSKVQELKAQVLYRKGDFAGAY 125

Query: 216 YYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
            Y + ++RN Q  D  S  +L N   V +A
Sbjct: 126 AYLRTVIRNSQ--DDYSEERLANLTAVAAA 153



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>RS4_HAEI8 (Q4QM98) 30S ribosomal protein S4|
          Length = 206

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -2

Query: 297 LELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAREN 118
           LE + D+V Y      +A  R  +R    HK +V NG+V +  S++  +N  DV + RE 
Sbjct: 94  LEGRLDNVVYRM---GFAATRAEARQLVSHKAIVVNGRVVNIPSFQVSVN--DVVAIREK 148

Query: 117 IKDKSAIAGVVKGKSSLKHRKEK 49
            K ++ I    K    L  ++EK
Sbjct: 149 SKKQARI----KASLELAEQREK 167



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>RS4_HAEDU (Q7VKF7) 30S ribosomal protein S4|
          Length = 208

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -2

Query: 297 LELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAREN 118
           LE + D+V Y      +A  R  +R    HK +V NG+V +  SY+  ++  DV + RE 
Sbjct: 96  LEGRLDNVVYRM---GFAATRAEARQLVSHKSIVVNGRVVNIPSYQ--VSVDDVVTVREK 150

Query: 117 IKDKSAIAGVVKGKSSLKHRKEK 49
            K ++ I    K    L  ++EK
Sbjct: 151 SKKQARI----KASLELASQREK 169



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>RS4_HAEIN (P44373) 30S ribosomal protein S4|
          Length = 205

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -2

Query: 297 LELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAREN 118
           LE + D+V Y      +A  R  +R    HK +V NG+V +  S++  +N  DV + RE 
Sbjct: 93  LEGRLDNVVYRM---GFATTRAEARQLVSHKAIVVNGRVVNIPSFQVSVN--DVVAIREK 147

Query: 117 IKDKSAIAGVVKGKSSLKHRKEK 49
            K ++ I    K    L  ++EK
Sbjct: 148 SKKQARI----KASLELAEQREK 166



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>CI055_HUMAN (Q5VZ89) Protein C9orf55|
          Length = 1620

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -2

Query: 435 QARDVICEFGKIGLPPT-AMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTY 268
           QA DV+ +  K  + P   + Y ++M      G      ++L EM T  +KP+++TY
Sbjct: 513 QAYDVLIKMRKTDVDPLDEVCYRVVMQLCGLWGHPVLAVRVLFEMKTARIKPNAITY 569



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>TOP1_BACAN (P40114) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 870

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 240 VRDFSRAFYYHKQMVRN-GQVPDAKSYRKLLNTLDVKSARENIKDK 106
           + ++    YYH Q++ + G  P  K+  ++LN   +KS  EN+KD+
Sbjct: 199 IENYREQSYYHLQLITDLGLKPVMKTEDQVLNPSPLKSLGENLKDQ 244



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>RS4_PSEAE (O52759) 30S ribosomal protein S4|
          Length = 206

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  SR    HK +  NGQ  +  SY+  +   DV + 
Sbjct: 91  LQLLECRLDNVVYRM---GFGSTRSESRQLVSHKAITVNGQTVNIPSYQ--VKAGDVVAV 145

Query: 126 RENIKDKSAIA 94
           RE  K++  IA
Sbjct: 146 REKSKNQLRIA 156



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>TKTN_METJA (Q58094) Putative transketolase N-terminal section (EC 2.2.1.1)|
           (TK)
          Length = 274

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/92 (25%), Positives = 42/92 (45%)
 Frame = -2

Query: 351 AKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDA 172
           A    HYKL  L+  +   +L+ D  T   +  +   ++    AF +    +      D 
Sbjct: 161 AMAAAHYKLDNLIAFIDRNKLQIDGCTEDVM--SLGDIKAKFEAFGWDVFEI------DG 212

Query: 171 KSYRKLLNTLDVKSARENIKDKSAIAGVVKGK 76
            ++ +++NT++   + +N K K  IA  VKGK
Sbjct: 213 HNFEEIINTVEKAKSMKNGKPKMIIAYTVKGK 244



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>RS4_SHEVI (Q9S0Q9) 30S ribosomal protein S4|
          Length = 206

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/71 (29%), Positives = 36/71 (50%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           ++ LE + D+V Y      +   R  SR    HK ++ NG V +  S++  ++  DV S 
Sbjct: 91  LTLLETRLDNVVYRM---GFGATRAESRQLVSHKSILVNGSVVNIPSFK--VSASDVISI 145

Query: 126 RENIKDKSAIA 94
           RE  K ++ I+
Sbjct: 146 REKSKKQARIS 156



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>AEP3_CANGA (Q6FKT1) ATPase expression protein 3|
          Length = 623

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
 Frame = -2

Query: 375 YNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYA------RVRDF-SRAF 217
           YN ++  Y+K        +L  +M     KP++ TY+ L+          ++R   +   
Sbjct: 221 YNDILYFYSKKYDFATCRELFAQMKVEGCKPNTTTYNILLLNLVKKVHMRKIRSIKNELL 280

Query: 216 YYHKQMVRNGQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGV 88
           +Y + M +NG   D  ++    N L+ + +R+   +K    GV
Sbjct: 281 FYLRNMQKNGIFCDTVTWNTCYNFLNDEMSRDLYIEKLIDCGV 323



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>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -2

Query: 207 KQMVRNGQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGVV--KGKSSLKHRKEKKDEFG 34
           K  V   ++PD K  RK+L     +  +  ++DK  +  +   K K  +  RK+KK +  
Sbjct: 642 KAEVEQVELPDGKKRRKVLALPSHRGPKIRLRDKGKVKSLPSRKPKPQMGQRKQKKQQLA 701

Query: 33  RTVK 22
            +V+
Sbjct: 702 SSVQ 705



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>RS4_VIBVY (Q7MPG5) 30S ribosomal protein S4|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK ++ NG+V +  S++   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAEARQLVSHKAILVNGKVVNVPSFKVAAN--DVVSI 145

Query: 126 RENIKDKSAIAGVVK 82
           RE  K ++ I   ++
Sbjct: 146 REKAKQQTRIKAALE 160



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>RS4_VIBVU (Q8DE62) 30S ribosomal protein S4|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK ++ NG+V +  S++   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAEARQLVSHKAILVNGKVVNVPSFKVAAN--DVVSI 145

Query: 126 RENIKDKSAIAGVVK 82
           RE  K ++ I   ++
Sbjct: 146 REKAKQQTRIKAALE 160



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>RS4_VIBPA (Q87SZ1) 30S ribosomal protein S4|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK ++ NG+V +  S++   N  DV S 
Sbjct: 91  LQLLEGRLDNVVYRM---GFGATRAEARQLVSHKAILVNGKVVNVPSFKVAAN--DVVSI 145

Query: 126 RENIKDKSAIAGVVK 82
           RE  K ++ I   ++
Sbjct: 146 REKAKQQARIKAALE 160



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>RS4_SHEON (P59131) 30S ribosomal protein S4|
          Length = 206

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  SR    HK ++ NG+V +  S++   N  DV S 
Sbjct: 91  LQLLETRLDNVVYRM---GFGATRAESRQLVSHKSVMVNGRVVNIPSFKVSAN--DVVSI 145

Query: 126 RENIKDKSAIAGVVK 82
           RE  + ++ I   ++
Sbjct: 146 REKSRTQARIKAALE 160



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>SYA_HELHP (Q7VHV4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 892

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -2

Query: 144 LDVKSARENIKDKSAIAGVVKGKSSLKHRKEKKDEFGRTVK 22
           L++  ARE++K +  + G+ K K  L   KEK ++  ++VK
Sbjct: 740 LELSRARESLKAQDVLQGIEKIKMQLNEAKEKANKAKQSVK 780



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>IFIT5_HUMAN (Q13325) Interferon-induced protein with tetratricopeptide repeats|
           5 (IFIT-5) (Retinoic acid- and interferon-inducible 58
           kDa protein)
          Length = 482

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -2

Query: 384 AMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSR 223
           A  Y  L N YA+GGQ+     + ++   LE   D   +  + Y Y R ++F R
Sbjct: 338 AFAYTDLANMYAEGGQYSNAEDIFRKALRLENITDDHKHQ-IHYHYGRFQEFHR 390



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>Y213_MYCPN (P75556) Hypothetical protein MG075 homolog (G07_orf1030)|
          Length = 1030

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 35  PNSSFFSFLCFKLDFPFTTPAMALLSFIFSLADFTSKV 148
           PN SFF     + +F  ++   A L FIF   +FT  V
Sbjct: 129 PNQSFFDLSAPRSNFTLSSDKKASLDFIFRFTNFTESV 166



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>TEKT3_MOUSE (Q6X6Z7) Tektin-3|
          Length = 490

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = -2

Query: 558 RAGNTEKLMETWKSMTDEKV--GCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPT 385
           R   T  + ETW   TD+ V    +       L    ++ L V A ++  +F K+ L   
Sbjct: 289 RVDATVSVPETWAKFTDDNVLRSQSERAASAKLREETENLLIVTANEMWNQFNKVNL--- 345

Query: 384 AMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSV 274
           A T  I     AK   H  L + L+E+  +E+  +S+
Sbjct: 346 AFTNRIAETVDAKNKIHTHLTKTLQEIFQIEMTIESI 382



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>RS4_MANSM (Q65QX9) 30S ribosomal protein S4|
          Length = 206

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 25/83 (30%), Positives = 41/83 (49%)
 Frame = -2

Query: 297 LELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSAREN 118
           LE + D+V Y      +A  R  +R    HK +V NG+V +  S++  ++  DV + RE 
Sbjct: 94  LEGRLDNVVYRM---GFAATRAEARQLVSHKAIVVNGRVVNIPSFQ--VSVDDVVAVREK 148

Query: 117 IKDKSAIAGVVKGKSSLKHRKEK 49
            K ++ I    K    L  ++EK
Sbjct: 149 SKKQARI----KASLELAEQREK 167



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>RS4_COXBU (Q83EQ3) 30S ribosomal protein S4|
          Length = 206

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
 Frame = -2

Query: 375 YNILMNAYAKGGQHYKLPQLLKE------MSTLELKPDSVTYSTLIYAYARVRDFSRAFY 214
           Y++L   +A    +YK    LK       +  LE + D+V Y      +A  R  +R   
Sbjct: 65  YDVLEKQFAN---YYKQADRLKGSTGDNLLKLLESRLDNVVYRM---GFAATRAEARQLI 118

Query: 213 YHKQMVRNGQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGVVK 82
            HK ++ NG+V +  SY+  +   D+   R   K +  I G ++
Sbjct: 119 SHKAILVNGEVVNIPSYQ--VKPGDIIEVRSRAKGQLRIKGALE 160



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>MOAP1_MACFA (Q95KI4) Modulator of apoptosis 1 (MAP-1)|
          Length = 351

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 234 DFSRAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
           +F R  ++  QM++  QVPD +  R+LL +L
Sbjct: 180 EFGRWMFHTTQMIKAWQVPDVEKRRRLLESL 210



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>MOAP1_HUMAN (Q96BY2) Modulator of apoptosis 1 (MAP-1) (MAP1) (Paraneoplastic|
           antigen MA4)
          Length = 351

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 234 DFSRAFYYHKQMVRNGQVPDAKSYRKLLNTL 142
           +F R  ++  QM++  QVPD +  R+LL +L
Sbjct: 180 EFGRWMFHTTQMIKAWQVPDVEKRRRLLESL 210



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>S6A12_CANFA (P27799) Sodium- and chloride-dependent betaine transporter|
           (Na+/Cl-betaine/GABA transporter)
          Length = 614

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +2

Query: 68  KLDFPFTTPAMALLSFIFSLADFTSKVFNS 157
           K+ + F TP + L +F+FSL+ +T   +N+
Sbjct: 498 KISWLFLTPGLCLATFLFSLSQYTPLKYNN 527



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>RS4_NEIMB (P66561) 30S ribosomal protein S4|
          Length = 206

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK +V NGQV +  S++  +   DV S 
Sbjct: 91  LQLLESRLDNVVYRM---GFGSTRAEARQLVSHKAIVVNGQVVNIPSFQ--VKAGDVVSV 145

Query: 126 RENIKDKSAI 97
           RE  K +  I
Sbjct: 146 REKAKKQVRI 155



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>RS4_NEIMA (P66560) 30S ribosomal protein S4|
          Length = 206

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK +V NGQV +  S++  +   DV S 
Sbjct: 91  LQLLESRLDNVVYRM---GFGSTRAEARQLVSHKAIVVNGQVVNIPSFQ--VKAGDVVSV 145

Query: 126 RENIKDKSAI 97
           RE  K +  I
Sbjct: 146 REKAKKQVRI 155



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>RS4_NEIG1 (Q5F5V1) 30S ribosomal protein S4|
          Length = 206

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 22/70 (31%), Positives = 33/70 (47%)
 Frame = -2

Query: 306 MSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSYRKLLNTLDVKSA 127
           +  LE + D+V Y      +   R  +R    HK +V NGQV +  S++  +   DV S 
Sbjct: 91  LQLLESRLDNVVYRM---GFGSTRAEARQLVSHKAIVVNGQVVNIPSFQ--VKAGDVVSV 145

Query: 126 RENIKDKSAI 97
           RE  K +  I
Sbjct: 146 REKAKKQVRI 155



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>YBBD_BACSU (P40406) Hypothetical lipoprotein ybbD precursor (ORF1)|
          Length = 642

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
 Frame = -2

Query: 342 GQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHKQMVRNGQVPDAKSY 163
           GQ   +   +K    + L P SVT      +    + F+R     K+ V+NG +P+ +  
Sbjct: 330 GQEEAVVMAVKAGVDIALMPASVT------SLKEEQKFARVIQALKEAVKNGDIPEQQIN 383

Query: 162 RKLLNTLDVK------SARENIKDKSAIAGVVKGKSSLKHRKEKK 46
             +   + +K       AR +   K  IA   K   S +H K +K
Sbjct: 384 NSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEK 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,615,296
Number of Sequences: 219361
Number of extensions: 1897731
Number of successful extensions: 5858
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5848
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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