ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome... 392 e-106
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 392 e-106
3dbj|AK104944.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106
4dbj|AK068789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106
5emb|AL133538.16| Human DNA sequence from clone RP11-550N16 on ch... 50 0.008
6emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on ch... 46 0.13
7dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP... 46 0.13
8dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 46 0.13
9emb|BX927218.17| Zebrafish DNA sequence from clone DKEY-14O18 in... 44 0.51
10gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-... 42 2.0
11gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, compl... 42 2.0
12gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, comp... 42 2.0
13gb|AC034256.3|F7H2 Sequence of BAC F7H2 from Arabidopsis thalian... 42 2.0
14emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 i... 42 2.0
15gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genom... 40 8.0
16gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome... 40 8.0
17gb|AY363526.1| Influenza A virus (A/swine/Hong Kong/1197/02(H3N2... 40 8.0
18gb|AY363524.1| Influenza A virus (A/swine/Hong Kong/9745/01(H3N2... 40 8.0
19gb|AY363523.1| Influenza A virus (A/swine/Hong Kong/9296/01(H3N2... 40 8.0
20gb|AY363522.1| Influenza A virus (A/swine/Hong Kong/7982/00(H3N2... 40 8.0
21gb|AY363521.1| Influenza A virus (A/swine/Hong Kong/5212/99(H3N2... 40 8.0
22gb|AY363520.1| Influenza A virus (A/swine/Hong Kong/5200/99(H3N2... 40 8.0
23gb|AY363519.1| Influenza A virus (A/swine/Hong Kong/5190/99(H3N2... 40 8.0
24ref|XM_451871.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B07667g ... 40 8.0
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.0
26gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome... 40 8.0
27gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome... 40 8.0
28emb|AL450427.11| Human DNA sequence from clone RP11-372H19 on ch... 40 8.0
29gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 8.0
30emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.0
31emb|AJ293926.1|IVI293926 Influenza A virus (A/Hong Kong/1774/99(... 40 8.0
32gb|AC087500.16| Homo sapiens chromosome 17, clone RP11-333E1, co... 40 8.0
33gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.0
34gb|AC153763.3| Loxodonta africana clone VMRC15-160B20, complete ... 40 8.0
35gb|AC107061.6| Homo sapiens BAC clone RP11-749L19 from 4, comple... 40 8.0
36dbj|AB158487.1| Sus scrofa PPP1R11, ZNRD1, RNF39, TRIM10, TRIM31... 40 8.0
37dbj|AB158486.1| Sus scrofa PPP1R11, ZNRD1, RNF39, GABBR1, MOG, U... 40 8.0
38gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, comp... 40 8.0
39gb|AC093253.2| Homo sapiens chromosome 5 clone RP11-172J18, comp... 40 8.0
40gb|AC027304.4| Homo sapiens chromosome 5 clone CTB-118N6, comple... 40 8.0
41gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, com... 40 8.0
42gb|AC016987.4|AC016987 Homo sapiens chromosome 15, clone RP11-13... 40 8.0
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
44gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosom... 40 8.0
45gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosom... 40 8.0
46gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7... 40 8.0
47gb|AC112235.4| Homo sapiens BAC clone RP11-285D1 from 2, complet... 40 8.0
48gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 8.0
49gb|AC126767.2| Homo sapiens chromosome 5 clone RP11-249M12, comp... 40 8.0
50dbj|AK103200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
51gb|AC155905.1| Mus musculus BAC clone RP24-457D12 from 12, compl... 40 8.0
52emb|BX255914.3| Zebrafish DNA sequence from clone CH211-212G7 in... 40 8.0
53tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete int... 40 8.0
54gb|AC124354.4| Mus musculus BAC clone RP24-481K12 from 12, compl... 40 8.0
55emb|AL670464.12| Mouse DNA sequence from clone RP23-12I24 on chr... 40 8.0 
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08,
             complete sequence
          Length = 141383

 Score =  392 bits (198), Expect = e-106
 Identities = 478/570 (83%), Gaps = 1/570 (0%)
 Strand = Plus / Plus

                                                                         
Query: 21    tttttactgttcttccaaat-tcatccttcttttctttcctatgttttaagctagatttt 79
             ||||| |||||||||||||  ||||||||||| || ||||||||||||| ||| || |||
Sbjct: 16983 ttttttctgttcttccaaaactcatccttcttctccttcctatgttttaggctggacttt 17042

                                                                         
Query: 80    ccttttacaactcctgcaatggcactcttatcctttatattttcccttgcagatttcaca 139
             |||||||  | |||  | |||||| ||||||||||||| || |  ||||||| |||||||
Sbjct: 17043 ccttttaagattcccactatggcattcttatcctttatgttctttcttgcagctttcaca 17102

                                                                         
Query: 140   tccaaggtattcaacagctttctgtatgactttgcatcaggcacttgtccattccgaacc 199
             ||||| |||||||| | |||| | |||||  |  ||||||||| ||||||| | ||||||
Sbjct: 17103 tccaatgtattcaataactttttatatgaactaacatcaggcaattgtccacttcgaacc 17162

                                                                         
Query: 200   atctgcttgtggtaatagaatgctctcgagaagtcacggacacgagcatatgcatatatc 259
             ||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 17163 atcagcttgtggtaatagaatgctctcgaaaagtcacgaacacgggcatacgcataaatc 17222

                                                                         
Query: 260   agtgtagaatatgtaactgaatctggttttagttccagagtagacatctctttcaggagt 319
             | |||||| ||||| || ||||||||||||| ||||| || || ||||||||||| ||||
Sbjct: 17223 attgtagagtatgttacagaatctggttttaattccatagcagccatctctttcaagagt 17282

                                                                         
Query: 320   tggggcaatttgtaatgctgtcctccctttgcataagcattcatcaaaatgttgtaggtc 379
             ||||| ||||| ||||| ||||||||| ||||| |||||||||||||||||||||| |||
Sbjct: 17283 tggggtaatttataatgttgtcctccccttgcaaaagcattcatcaaaatgttgtatgtc 17342

                                                                         
Query: 380   atagccgtaggaggtaaacctatttttccaaactcacatattacatctcttgcctgaaca 439
             ||  | |||||  | |||||     ||| ||||||| |||| |||||  |||||||||||
Sbjct: 17343 attacggtaggctgcaaaccagcccttctaaactcatatataacatccgttgcctgaaca 17402

                                                                         
Query: 440   aacaacccatgtttcgccaaaccatcaagtaccatgtgaaatgtgactctagtgcatcca 499
              ||| ||||||||| |||| ||||||||| |||||||| ||| | || ||||| |    |
Sbjct: 17403 tacagcccatgttttgccagaccatcaagcaccatgtggaatattaccctagttccagga 17462

                                                                         
Query: 500   accttttcatcggtcattgatttccatgtctccattaacttctctgtgttaccagccctc 559
             |||||||||| | |||||||| ||||||||||||||| |||||| |||| ||||||||||
Sbjct: 17463 accttttcattgatcattgatctccatgtctccattagcttctccgtgtcaccagccctc 17522

                                           
Query: 560   ctaaatatgtcaagcaaagctgtatatgtt 589
             ||||| ||||||| ||| ||||||||||||
Sbjct: 17523 ctaaacatgtcaatcaatgctgtatatgtt 17552
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  392 bits (198), Expect = e-106
 Identities = 478/570 (83%), Gaps = 1/570 (0%)
 Strand = Plus / Plus

                                                                            
Query: 21       tttttactgttcttccaaat-tcatccttcttttctttcctatgttttaagctagatttt 79
                ||||| |||||||||||||  ||||||||||| || ||||||||||||| ||| || |||
Sbjct: 12856437 ttttttctgttcttccaaaactcatccttcttctccttcctatgttttaggctggacttt 12856496

                                                                            
Query: 80       ccttttacaactcctgcaatggcactcttatcctttatattttcccttgcagatttcaca 139
                |||||||  | |||  | |||||| ||||||||||||| || |  ||||||| |||||||
Sbjct: 12856497 ccttttaagattcccactatggcattcttatcctttatgttctttcttgcagctttcaca 12856556

                                                                            
Query: 140      tccaaggtattcaacagctttctgtatgactttgcatcaggcacttgtccattccgaacc 199
                ||||| |||||||| | |||| | |||||  |  ||||||||| ||||||| | ||||||
Sbjct: 12856557 tccaatgtattcaataactttttatatgaactaacatcaggcaattgtccacttcgaacc 12856616

                                                                            
Query: 200      atctgcttgtggtaatagaatgctctcgagaagtcacggacacgagcatatgcatatatc 259
                ||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 12856617 atcagcttgtggtaatagaatgctctcgaaaagtcacgaacacgggcatacgcataaatc 12856676

                                                                            
Query: 260      agtgtagaatatgtaactgaatctggttttagttccagagtagacatctctttcaggagt 319
                | |||||| ||||| || ||||||||||||| ||||| || || ||||||||||| ||||
Sbjct: 12856677 attgtagagtatgttacagaatctggttttaattccatagcagccatctctttcaagagt 12856736

                                                                            
Query: 320      tggggcaatttgtaatgctgtcctccctttgcataagcattcatcaaaatgttgtaggtc 379
                ||||| ||||| ||||| ||||||||| ||||| |||||||||||||||||||||| |||
Sbjct: 12856737 tggggtaatttataatgttgtcctccccttgcaaaagcattcatcaaaatgttgtatgtc 12856796

                                                                            
Query: 380      atagccgtaggaggtaaacctatttttccaaactcacatattacatctcttgcctgaaca 439
                ||  | |||||  | |||||     ||| ||||||| |||| |||||  |||||||||||
Sbjct: 12856797 attacggtaggctgcaaaccagcccttctaaactcatatataacatccgttgcctgaaca 12856856

                                                                            
Query: 440      aacaacccatgtttcgccaaaccatcaagtaccatgtgaaatgtgactctagtgcatcca 499
                 ||| ||||||||| |||| ||||||||| |||||||| ||| | || ||||| |    |
Sbjct: 12856857 tacagcccatgttttgccagaccatcaagcaccatgtggaatattaccctagttccagga 12856916

                                                                            
Query: 500      accttttcatcggtcattgatttccatgtctccattaacttctctgtgttaccagccctc 559
                |||||||||| | |||||||| ||||||||||||||| |||||| |||| ||||||||||
Sbjct: 12856917 accttttcattgatcattgatctccatgtctccattagcttctccgtgtcaccagccctc 12856976

                                              
Query: 560      ctaaatatgtcaagcaaagctgtatatgtt 589
                ||||| ||||||| ||| ||||||||||||
Sbjct: 12856977 ctaaacatgtcaatcaatgctgtatatgtt 12857006
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>dbj|AK104944.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-F08, full
           insert sequence
          Length = 889

 Score =  392 bits (198), Expect = e-106
 Identities = 478/570 (83%), Gaps = 1/570 (0%)
 Strand = Plus / Minus

                                                                       
Query: 21  tttttactgttcttccaaat-tcatccttcttttctttcctatgttttaagctagatttt 79
           ||||| |||||||||||||  ||||||||||| || ||||||||||||| ||| || |||
Sbjct: 747 ttttttctgttcttccaaaactcatccttcttctccttcctatgttttaggctggacttt 688

                                                                       
Query: 80  ccttttacaactcctgcaatggcactcttatcctttatattttcccttgcagatttcaca 139
           |||||||  | |||  | |||||| ||||||||||||| || |  ||||||| |||||||
Sbjct: 687 ccttttaagattcccactatggcattcttatcctttatgttctttcttgcagctttcaca 628

                                                                       
Query: 140 tccaaggtattcaacagctttctgtatgactttgcatcaggcacttgtccattccgaacc 199
           ||||| |||||||| | |||| | |||||  |  ||||||||| ||||||| | ||||||
Sbjct: 627 tccaatgtattcaataactttttatatgaactaacatcaggcaattgtccacttcgaacc 568

                                                                       
Query: 200 atctgcttgtggtaatagaatgctctcgagaagtcacggacacgagcatatgcatatatc 259
           ||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 567 atcagcttgtggtaatagaatgctctcgaaaagtcacgaacacgggcatacgcataaatc 508

                                                                       
Query: 260 agtgtagaatatgtaactgaatctggttttagttccagagtagacatctctttcaggagt 319
           | |||||| ||||| || ||||||||||||| ||||| || || ||||||||||| ||||
Sbjct: 507 attgtagagtatgttacagaatctggttttaattccatagcagccatctctttcaagagt 448

                                                                       
Query: 320 tggggcaatttgtaatgctgtcctccctttgcataagcattcatcaaaatgttgtaggtc 379
           ||||| ||||| ||||| ||||||||| ||||| |||||||||||||||||||||| |||
Sbjct: 447 tggggtaatttataatgttgtcctccccttgcaaaagcattcatcaaaatgttgtatgtc 388

                                                                       
Query: 380 atagccgtaggaggtaaacctatttttccaaactcacatattacatctcttgcctgaaca 439
           ||  | |||||  | |||||     ||| ||||||| |||| |||||  |||||||||||
Sbjct: 387 attacggtaggctgcaaaccagcccttctaaactcatatataacatccgttgcctgaaca 328

                                                                       
Query: 440 aacaacccatgtttcgccaaaccatcaagtaccatgtgaaatgtgactctagtgcatcca 499
            ||| ||||||||| |||| ||||||||| |||||||| ||| | || ||||| |    |
Sbjct: 327 tacagcccatgttttgccagaccatcaagcaccatgtggaatattaccctagttccagga 268

                                                                       
Query: 500 accttttcatcggtcattgatttccatgtctccattaacttctctgtgttaccagccctc 559
           |||||||||| | |||||||| ||||||||||||||| |||||| |||| ||||||||||
Sbjct: 267 accttttcattgatcattgatctccatgtctccattagcttctccgtgtcaccagccctc 208

                                         
Query: 560 ctaaatatgtcaagcaaagctgtatatgtt 589
           ||||| ||||||| ||| ||||||||||||
Sbjct: 207 ctaaacatgtcaatcaatgctgtatatgtt 178
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>dbj|AK068789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166J08, full
            insert sequence
          Length = 2426

 Score =  392 bits (198), Expect = e-106
 Identities = 478/570 (83%), Gaps = 1/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 21   tttttactgttcttccaaat-tcatccttcttttctttcctatgttttaagctagatttt 79
            ||||| |||||||||||||  ||||||||||| || ||||||||||||| ||| || |||
Sbjct: 2284 ttttttctgttcttccaaaactcatccttcttctccttcctatgttttaggctggacttt 2225

                                                                        
Query: 80   ccttttacaactcctgcaatggcactcttatcctttatattttcccttgcagatttcaca 139
            |||||||  | |||  | |||||| ||||||||||||| || |  ||||||| |||||||
Sbjct: 2224 ccttttaagattcccactatggcattcttatcctttatgttctttcttgcagctttcaca 2165

                                                                        
Query: 140  tccaaggtattcaacagctttctgtatgactttgcatcaggcacttgtccattccgaacc 199
            ||||| |||||||| | |||| | |||||  |  ||||||||| ||||||| | ||||||
Sbjct: 2164 tccaatgtattcaataactttttatatgaactaacatcaggcaattgtccacttcgaacc 2105

                                                                        
Query: 200  atctgcttgtggtaatagaatgctctcgagaagtcacggacacgagcatatgcatatatc 259
            ||| ||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 2104 atcagcttgtggtaatagaatgctctcgaaaagtcacgaacacgggcatacgcataaatc 2045

                                                                        
Query: 260  agtgtagaatatgtaactgaatctggttttagttccagagtagacatctctttcaggagt 319
            | |||||| ||||| || ||||||||||||| ||||| || || ||||||||||| ||||
Sbjct: 2044 attgtagagtatgttacagaatctggttttaattccatagcagccatctctttcaagagt 1985

                                                                        
Query: 320  tggggcaatttgtaatgctgtcctccctttgcataagcattcatcaaaatgttgtaggtc 379
            ||||| ||||| ||||| ||||||||| ||||| |||||||||||||||||||||| |||
Sbjct: 1984 tggggtaatttataatgttgtcctccccttgcaaaagcattcatcaaaatgttgtatgtc 1925

                                                                        
Query: 380  atagccgtaggaggtaaacctatttttccaaactcacatattacatctcttgcctgaaca 439
            ||  | |||||  | |||||     ||| ||||||| |||| |||||  |||||||||||
Sbjct: 1924 attacggtaggctgcaaaccagcccttctaaactcatatataacatccgttgcctgaaca 1865

                                                                        
Query: 440  aacaacccatgtttcgccaaaccatcaagtaccatgtgaaatgtgactctagtgcatcca 499
             ||| ||||||||| |||| ||||||||| |||||||| ||| | || ||||| |    |
Sbjct: 1864 tacagcccatgttttgccagaccatcaagcaccatgtggaatattaccctagttccagga 1805

                                                                        
Query: 500  accttttcatcggtcattgatttccatgtctccattaacttctctgtgttaccagccctc 559
            |||||||||| | |||||||| ||||||||||||||| |||||| |||| ||||||||||
Sbjct: 1804 accttttcattgatcattgatctccatgtctccattagcttctccgtgtcaccagccctc 1745

                                          
Query: 560  ctaaatatgtcaagcaaagctgtatatgtt 589
            ||||| ||||||| ||| ||||||||||||
Sbjct: 1744 ctaaacatgtcaatcaatgctgtatatgtt 1715
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>emb|AL133538.16| Human DNA sequence from clone RP11-550N16 on chromosome 6q26-27
             Contains a CpG island, complete sequence
          Length = 109238

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 55    tttcctatgttttaagctagatttt 79
             |||||||||||||||||||||||||
Sbjct: 85622 tttcctatgttttaagctagatttt 85598
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>emb|AL731897.12| Human DNA sequence from clone RP11-284G10 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 125196

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 37    aaattcatccttcttttctttcc 59
             |||||||||||||||||||||||
Sbjct: 58440 aaattcatccttcttttctttcc 58418
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>dbj|AP006210.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-449F3, complete
              sequence
          Length = 165755

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 37     aaattcatccttcttttctttcc 59
              |||||||||||||||||||||||
Sbjct: 134238 aaattcatccttcttttctttcc 134216
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>dbj|AB020873.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 5/10
          Length = 100000

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 37    aaattcatccttcttttctttcc 59
             |||||||||||||||||||||||
Sbjct: 82018 aaattcatccttcttttctttcc 81996
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>emb|BX927218.17| Zebrafish DNA sequence from clone DKEY-14O18 in linkage group 19,
             complete sequence
          Length = 208809

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 257   atcagtgtagaatatgtaactgaatc 282
             |||||||| |||||||||||||||||
Sbjct: 53204 atcagtgttgaatatgtaactgaatc 53229



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 257   atcagtgtagaatatgtaactgaatc 282
             |||||||| |||||||||||||||||
Sbjct: 48593 atcagtgttgaatatgtaactgaatc 48618
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>gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-327O24, complete sequence
          Length = 164564

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 546   tgttaccagccctcctaaatatgtc 570
             ||||||||||||||| |||||||||
Sbjct: 29724 tgttaccagccctccaaaatatgtc 29700
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>gb|AC092043.3| Homo sapiens chromosome 3 clone RP11-141M3, complete sequence
          Length = 176140

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 37     aaattcatccttcttttctttccta 61
              ||||||| |||||||||||||||||
Sbjct: 162763 aaattcagccttcttttctttccta 162739
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>gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, complete sequence
          Length = 145023

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 546  tgttaccagccctcctaaatatgtc 570
            ||||||||||||||| |||||||||
Sbjct: 5378 tgttaccagccctccaaaatatgtc 5354
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>gb|AC034256.3|F7H2 Sequence of BAC F7H2 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 77521

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   actcttatcctttatattttc 123
             |||||||||||||||||||||
Sbjct: 68627 actcttatcctttatattttc 68647
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>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20,
              complete sequence
          Length = 221849

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 355    agcattcatcaaaatgttgta 375
              |||||||||||||||||||||
Sbjct: 179079 agcattcatcaaaatgttgta 179059
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>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete
              sequence
          Length = 126163

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ccttcttttctttcctatgt 64
              ||||||||||||||||||||
Sbjct: 123116 ccttcttttctttcctatgt 123097
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>gb|AC154301.2| Mus musculus BAC clone RP23-392P5 from chromosome 14, complete sequence
          Length = 207510

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 528    tctccattaacttctctgtgttac 551
              ||||| ||||||||||||||||||
Sbjct: 158488 tctcctttaacttctctgtgttac 158511
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>gb|AY363526.1| Influenza A virus (A/swine/Hong Kong/1197/02(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 931 tcctaaatatgtcaagcaaa 950
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>gb|AY363524.1| Influenza A virus (A/swine/Hong Kong/9745/01(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 931 tcctaaatatgtcaagcaaa 950
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>gb|AY363523.1| Influenza A virus (A/swine/Hong Kong/9296/01(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1626

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 925 tcctaaatatgtcaagcaaa 944
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>gb|AY363522.1| Influenza A virus (A/swine/Hong Kong/7982/00(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 955 tcctaaatatgtcaagcaaa 974
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>gb|AY363521.1| Influenza A virus (A/swine/Hong Kong/5212/99(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1621

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 920 tcctaaatatgtcaagcaaa 939
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>gb|AY363520.1| Influenza A virus (A/swine/Hong Kong/5200/99(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1662

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 961 tcctaaatatgtcaagcaaa 980
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>gb|AY363519.1| Influenza A virus (A/swine/Hong Kong/5190/99(H3N2)) hemagglutinin
           (HA) gene, partial cds
          Length = 1595

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 895 tcctaaatatgtcaagcaaa 914
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>ref|XM_451871.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B07667g predicted mRNA
          Length = 6000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 570  caagcaaagctgtatatgtt 589
            ||||||||||||||||||||
Sbjct: 5259 caagcaaagctgtatatgtt 5278
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 45       ccttcttttctttcctatgt 64
                ||||||||||||||||||||
Sbjct: 16197937 ccttcttttctttcctatgt 16197918
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>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence
          Length = 134122

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 40    ttcatccttcttttctttcctatgtttt 67
             ||||||||||||||||||| | ||||||
Sbjct: 68286 ttcatccttcttttctttcttttgtttt 68313
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>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence
          Length = 186595

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    attcatccttcttttctttc 58
             ||||||||||||||||||||
Sbjct: 20114 attcatccttcttttctttc 20095
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>emb|AL450427.11| Human DNA sequence from clone RP11-372H19 on chromosome 6, complete
             sequence
          Length = 68843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   taagcattcatcaaaatgtt 372
             ||||||||||||||||||||
Sbjct: 50135 taagcattcatcaaaatgtt 50154
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     ccaaggtattcaacagcttt 160
               ||||||||||||||||||||
Sbjct: 1793727 ccaaggtattcaacagcttt 1793746
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 570    caagcaaagctgtatatgtt 589
              ||||||||||||||||||||
Sbjct: 673121 caagcaaagctgtatatgtt 673140
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>emb|AJ293926.1|IVI293926 Influenza A virus (A/Hong Kong/1774/99(H3N2)) partial ha gene for
           haemagglutinin, genomic RNA
          Length = 1699

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 558 tcctaaatatgtcaagcaaa 577
           ||||||||||||||||||||
Sbjct: 967 tcctaaatatgtcaagcaaa 986
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>gb|AC087500.16| Homo sapiens chromosome 17, clone RP11-333E1, complete sequence
          Length = 170770

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    cactcttatcctttatattt 121
              ||||||||||||||||||||
Sbjct: 157345 cactcttatcctttatattt 157326
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    catatgcatatatcagtgta 265
              ||||||||||||||||||||
Sbjct: 663119 catatgcatatatcagtgta 663138
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>gb|AC153763.3| Loxodonta africana clone VMRC15-160B20, complete sequence
          Length = 130183

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    tccttcttttctttcctatgtttt 67
             ||||||||||||||||| ||||||
Sbjct: 77897 tccttcttttctttcctttgtttt 77920
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>gb|AC107061.6| Homo sapiens BAC clone RP11-749L19 from 4, complete sequence
          Length = 110541

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    ccaaattcatccttcttttctttc 58
             |||||||||| |||||||||||||
Sbjct: 96709 ccaaattcattcttcttttctttc 96732
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>dbj|AB158487.1| Sus scrofa PPP1R11, ZNRD1, RNF39, TRIM10, TRIM31, MOG, TRIM15, KRAB,
             TRIM40 genes, complete cds
          Length = 143480

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tctttttactgttcttccaa 38
             ||||||||||||||||||||
Sbjct: 26667 tctttttactgttcttccaa 26686
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>dbj|AB158486.1| Sus scrofa PPP1R11, ZNRD1, RNF39, GABBR1, MOG, UBD, OLF42-3, OLF42-2,
              OLF42-1, KRAB genes, complete cds
          Length = 156044

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tctttttactgttcttccaa 38
              ||||||||||||||||||||
Sbjct: 120819 tctttttactgttcttccaa 120838
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>gb|AC114284.2| Homo sapiens chromosome 5 clone CTD-2334D19, complete sequence
          Length = 126480

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    ttcctatgttttaagctagatttt 79
             ||||||||||||||| ||||||||
Sbjct: 24031 ttcctatgttttaagttagatttt 24008
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>gb|AC093253.2| Homo sapiens chromosome 5 clone RP11-172J18, complete sequence
          Length = 82161

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    ttcctatgttttaagctagatttt 79
             ||||||||||||||| ||||||||
Sbjct: 63889 ttcctatgttttaagttagatttt 63866
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>gb|AC027304.4| Homo sapiens chromosome 5 clone CTB-118N6, complete sequence
          Length = 111096

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   tcttttctttcctatgtttt 67
            ||||||||||||||||||||
Sbjct: 5321 tcttttctttcctatgtttt 5340
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>gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, complete sequence
          Length = 171309

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cactcttatcctttatattt 121
             ||||||||||||||||||||
Sbjct: 15772 cactcttatcctttatattt 15753
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>gb|AC016987.4|AC016987 Homo sapiens chromosome 15, clone RP11-133L19, complete sequence
          Length = 176639

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ttatcctttatattttccct 126
              ||||||||||||||||||||
Sbjct: 165709 ttatcctttatattttccct 165690
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 45       ccttcttttctttcctatgt 64
                ||||||||||||||||||||
Sbjct: 16192470 ccttcttttctttcctatgt 16192451
to top
>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence
          Length = 210115

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 528    tctccattaacttctctgtgttac 551
              ||||| ||||||||||||||||||
Sbjct: 205014 tctcctttaacttctctgtgttac 204991
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>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete
             sequence
          Length = 215073

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    attcatccttcttttctttc 58
             ||||||||||||||||||||
Sbjct: 84350 attcatccttcttttctttc 84331
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>gb|AC008651.7|AC008651 Homo sapiens chromosome 5 clone CTB-187A7, complete sequence
          Length = 147098

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tcttttctttcctatgtttt 67
             ||||||||||||||||||||
Sbjct: 30891 tcttttctttcctatgtttt 30872
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>gb|AC112235.4| Homo sapiens BAC clone RP11-285D1 from 2, complete sequence
          Length = 30304

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tccagagtagacatctcttt 312
            ||||||||||||||||||||
Sbjct: 2216 tccagagtagacatctcttt 2197
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    ttatcctttatattttccct 126
              ||||||||||||||||||||
Sbjct: 199943 ttatcctttatattttccct 199962
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>gb|AC126767.2| Homo sapiens chromosome 5 clone RP11-249M12, complete sequence
          Length = 172289

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  tcttttctttcctatgtttt 67
           ||||||||||||||||||||
Sbjct: 250 tcttttctttcctatgtttt 231
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>dbj|AK103200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A14, full
           insert sequence
          Length = 995

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccttcttttctttcctatgt 64
           ||||||||||||||||||||
Sbjct: 730 ccttcttttctttcctatgt 749
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>gb|AC155905.1| Mus musculus BAC clone RP24-457D12 from 12, complete sequence
          Length = 173900

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    aaattcatccttcttttctt 56
             ||||||||||||||||||||
Sbjct: 40085 aaattcatccttcttttctt 40104
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>emb|BX255914.3| Zebrafish DNA sequence from clone CH211-212G7 in linkage group 20,
              complete sequence
          Length = 217957

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    aaacctatttttccaaactc 414
              ||||||||||||||||||||
Sbjct: 174385 aaacctatttttccaaactc 174366
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>tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft
             Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN
             (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10
          Length = 495475

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tccagagtagacatctcttt 312
             ||||||||||||||||||||
Sbjct: 50225 tccagagtagacatctcttt 50206
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>gb|AC124354.4| Mus musculus BAC clone RP24-481K12 from 12, complete sequence
          Length = 180819

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aaattcatccttcttttctt 56
             ||||||||||||||||||||
Sbjct: 29593 aaattcatccttcttttctt 29574
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>emb|AL670464.12| Mouse DNA sequence from clone RP23-12I24 on chromosome 4, complete
              sequence
          Length = 203558

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ttttctttcctatgttttaa 69
              ||||||||||||||||||||
Sbjct: 118847 ttttctttcctatgttttaa 118828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,763,199
Number of Sequences: 3902068
Number of extensions: 6763199
Number of successful extensions: 146619
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 146331
Number of HSP's gapped (non-prelim): 272
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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