ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
2dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
3dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
4dbj|AK105049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
5dbj|AK101152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
6ref|NM_192708.1| Oryza sativa (japonica cultivar-group), predic... 48 0.032
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
8gb|AY509906.1| Homo sapiens interleukin 26 (IL26) gene, complete... 42 1.9
9gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 42 1.9
10gb|AC144617.10| Medicago truncatula clone mth2-7m9, complete seq... 42 1.9
11gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 42 1.9
12gb|AC146722.16| Medicago truncatula clone mth2-23c16, complete s... 42 1.9
13gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 42 1.9
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
15gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Ca... 42 1.9
16emb|AL132987.4|CNS01DTV Human chromosome 14 DNA sequence BAC R-1... 42 1.9
17emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-8... 42 1.9
18gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
19gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genom... 40 7.7
20ref|XM_416196.1| PREDICTED: Gallus gallus similar to H2B histone... 40 7.7
21emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in ... 40 7.7
22gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome... 40 7.7
23emb|Z73970.1|CEC29A12 Caenorhabditis elegans Cosmid C29A12, comp... 40 7.7
24gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome... 40 7.7
25emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 i... 40 7.7
26gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Canc... 40 7.7
27emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segme... 40 7.7
28emb|AL671973.13| Mouse DNA sequence from clone RP23-334J9 on chr... 40 7.7
29gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Ca... 40 7.7
30gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Can... 40 7.7
31ref|NM_073362.3| Caenorhabditis elegans Temporarily Assigned Gen... 40 7.7
32gb|AF301173.1|AF301173 Petunia integrifolia S12 self-incompatibi... 40 7.7
33emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chr... 40 7.7
34dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
35dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
36gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 fro... 40 7.7
37dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
38gb|AF125442.1| Caenorhabditis elegans fosmid H04M03, complete se... 40 7.7
39dbj|AP001034.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.7
40gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Canc... 40 7.7
41emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chr... 40 7.7
42gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, comple... 40 7.7
43emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chr... 40 7.7
44emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chr... 40 7.7 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                            
Query: 468      gaaggttgctacctgatatcacttccagagcttgacaagcttatcatgacttactgaggc 527
                ||||||||| || | || ||| |||||||||||||||||| ||||||| || ||||||||
Sbjct: 23948977 gaaggttgcaacttaatgtcatttccagagcttgacaagcctatcatggctcactgaggc 23949036

                                              
Query: 528      gaccaaccctgatgcatttgatgcagctag 557
                 | ||||||||||||||||||||| |||||
Sbjct: 23949037 aatcaaccctgatgcatttgatgctgctag 23949066



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 490      ttccagagcttgacaagcttatcatgacttactgaggc 527
                |||||||||||||||| | ||||||| |||||||||||
Sbjct: 23934751 ttccagagcttgacaaacctatcatggcttactgaggc 23934788



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      cacacaaagagaaaggggaa 128
                ||||||||||||||||||||
Sbjct: 41470987 cacacaaagagaaaggggaa 41471006



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      cacacaaagagaaaggggaa 128
                ||||||||||||||||||||
Sbjct: 41440014 cacacaaagagaaaggggaa 41440033
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>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0704D04
          Length = 147638

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 468   gaaggttgctacctgatatcacttccagagcttgacaagcttatcatgacttactgaggc 527
             ||||||||| || | || ||| |||||||||||||||||| ||||||| || ||||||||
Sbjct: 95381 gaaggttgcaacttaatgtcatttccagagcttgacaagcctatcatggctcactgaggc 95440

                                           
Query: 528   gaccaaccctgatgcatttgatgcagctag 557
              | ||||||||||||||||||||| |||||
Sbjct: 95441 aatcaaccctgatgcatttgatgctgctag 95470



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 490   ttccagagcttgacaagcttatcatgacttactgaggc 527
             |||||||||||||||| | ||||||| |||||||||||
Sbjct: 81155 ttccagagcttgacaaacctatcatggcttactgaggc 81192
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>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0090K04
          Length = 152556

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 79/90 (87%)
 Strand = Plus / Plus

                                                                         
Query: 468   gaaggttgctacctgatatcacttccagagcttgacaagcttatcatgacttactgaggc 527
             ||||||||| || | || ||| |||||||||||||||||| ||||||| || ||||||||
Sbjct: 63499 gaaggttgcaacttaatgtcatttccagagcttgacaagcctatcatggctcactgaggc 63558

                                           
Query: 528   gaccaaccctgatgcatttgatgcagctag 557
              | ||||||||||||||||||||| |||||
Sbjct: 63559 aatcaaccctgatgcatttgatgctgctag 63588



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 490   ttccagagcttgacaagcttatcatgacttactgaggc 527
             |||||||||||||||| | ||||||| |||||||||||
Sbjct: 49273 ttccagagcttgacaaacctatcatggcttactgaggc 49310
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>dbj|AK105049.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F06, full
            insert sequence
          Length = 1916

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 490  ttccagagcttgacaagcttatcatgacttactgaggc 527
            |||||||||||||||| | ||||||| |||||||||||
Sbjct: 1671 ttccagagcttgacaaacctatcatggcttactgaggc 1634
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>dbj|AK101152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C19, full
            insert sequence
          Length = 3156

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 490  ttccagagcttgacaagcttatcatgacttactgaggc 527
            |||||||||||||||| | ||||||| |||||||||||
Sbjct: 2914 ttccagagcttgacaaacctatcatggcttactgaggc 2877
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>ref|NM_192708.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1953

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 522  tgaggcgaccaaccctgatgcatttgatgcagctag 557
            |||||| | ||||||||||||||||||||| |||||
Sbjct: 1914 tgaggcaatcaaccctgatgcatttgatgctgctag 1879
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 484      tatcacttccagagcttgaca 504
                |||||||||||||||||||||
Sbjct: 30010374 tatcacttccagagcttgaca 30010394



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 164      aaaatacataaaggcttctg 183
                ||||||||||||||||||||
Sbjct: 17404059 aaaatacataaaggcttctg 17404040
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>gb|AY509906.1| Homo sapiens interleukin 26 (IL26) gene, complete cds
          Length = 33991

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   aaaatgcagtcagaaaataca 171
             |||||||||||||||||||||
Sbjct: 15518 aaaatgcagtcagaaaataca 15498
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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
           sequence
          Length = 159661

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 484 tatcacttccagagcttgaca 504
           |||||||||||||||||||||
Sbjct: 232 tatcacttccagagcttgaca 212
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>gb|AC144617.10| Medicago truncatula clone mth2-7m9, complete sequence
          Length = 122853

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 486    tcacttccagagcttgacaagcttatcatgact 518
              |||||||||||||||||||| | | ||||||||
Sbjct: 117244 tcacttccagagcttgacaaacctgtcatgact 117212
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 484   tatcacttccagagcttgaca 504
             |||||||||||||||||||||
Sbjct: 97377 tatcacttccagagcttgaca 97357
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>gb|AC146722.16| Medicago truncatula clone mth2-23c16, complete sequence
          Length = 121968

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 486  tcacttccagagcttgacaagcttatcatgact 518
            |||||||||||||||||||| | | ||||||||
Sbjct: 3272 tcacttccagagcttgacaaacctgtcatgact 3240
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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    gtttatctgcagcagaaaaac 388
              |||||||||||||||||||||
Sbjct: 344082 gtttatctgcagcagaaaaac 344062
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 484      tatcacttccagagcttgaca 504
                |||||||||||||||||||||
Sbjct: 30101796 tatcacttccagagcttgaca 30101816



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 164      aaaatacataaaggcttctg 183
                ||||||||||||||||||||
Sbjct: 17397600 aaaatacataaaggcttctg 17397581
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>gb|AC007458.14| Homo sapiens 12 BAC RP11-444B24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190961

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    aaaatgcagtcagaaaataca 171
              |||||||||||||||||||||
Sbjct: 157049 aaaatgcagtcagaaaataca 157069
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>emb|AL132987.4|CNS01DTV Human chromosome 14 DNA sequence BAC R-188I13 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169505

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 26     gaagagcatatcaatggagtacctgaactacac 58
              ||||||| ||||||||||||| |||| ||||||
Sbjct: 144709 gaagagcctatcaatggagtatctgagctacac 144677
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>emb|AL136332.5|CNS01DW4 Human chromosome 14 DNA sequence BAC R-807G16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209157

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 26    gaagagcatatcaatggagtacctgaactacac 58
             ||||||| ||||||||||||| |||| ||||||
Sbjct: 11677 gaagagcctatcaatggagtatctgagctacac 11645
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    aaaatacataaaggcttctg 183
              ||||||||||||||||||||
Sbjct: 159684 aaaatacataaaggcttctg 159703
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>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete
              sequence
          Length = 137220

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aaaatacataaaggcttctg 183
              ||||||||||||||||||||
Sbjct: 126436 aaaatacataaaggcttctg 126417
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>ref|XM_416196.1| PREDICTED: Gallus gallus similar to H2B histone family, member F
           (LOC417956), mRNA
          Length = 841

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 aaaggggaaataagagcaaa 139
           ||||||||||||||||||||
Sbjct: 815 aaaggggaaataagagcaaa 834
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>emb|CR626875.10| Zebrafish DNA sequence from clone DKEY-31J4 in linkage group 15,
             complete sequence
          Length = 212742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   agagcaaacgcaattgagaaaaat 155
             ||||||||| ||||||||||||||
Sbjct: 81851 agagcaaacacaattgagaaaaat 81828
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>gb|AC124755.4| Mus musculus BAC clone RP23-285L4 from chromosome 12, complete sequence
          Length = 190631

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aagagaaaggggaaataaga 134
             ||||||||||||||||||||
Sbjct: 55148 aagagaaaggggaaataaga 55129
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>emb|Z73970.1|CEC29A12 Caenorhabditis elegans Cosmid C29A12, complete sequence
          Length = 41406

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 tgtgaccagtcaatgataac 207
           ||||||||||||||||||||
Sbjct: 101 tgtgaccagtcaatgataac 120
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>gb|AC117223.3| Mus musculus BAC clone RP23-348B1 from chromosome 2, complete sequence
          Length = 183972

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   acacaaagagaaaggggaaa 129
             ||||||||||||||||||||
Sbjct: 27228 acacaaagagaaaggggaaa 27209
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>emb|BX470150.13| Zebrafish DNA sequence from clone DKEY-164K14 in linkage group 23,
             complete sequence
          Length = 209342

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aatgcagtcagaaaatacat 172
             ||||||||||||||||||||
Sbjct: 26987 aatgcagtcagaaaatacat 26968
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>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 230983

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   taacaaacatacgaaggaag 29
            ||||||||||||||||||||
Sbjct: 6964 taacaaacatacgaaggaag 6983
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>emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segment 2/6
          Length = 293250

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    gcttgtgaccagtcaatgataaca 208
              ||||| ||||||||||||||||||
Sbjct: 253490 gcttgggaccagtcaatgataaca 253467
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>emb|AL671973.13| Mouse DNA sequence from clone RP23-334J9 on chromosome 11 Contains a
             nucleolin (Ncl) pseudogene, complete sequence
          Length = 104321

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   aaagagaaaggggaaataagagca 137
             |||||||||||||||| |||||||
Sbjct: 82642 aaagagaaaggggaaaaaagagca 82665
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>gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 67150

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   atacataaaggcttctgtgc 186
             ||||||||||||||||||||
Sbjct: 58838 atacataaaggcttctgtgc 58819
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>gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 197893

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tgcagtcagaaaatacataa 174
              ||||||||||||||||||||
Sbjct: 112795 tgcagtcagaaaatacataa 112814
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>ref|NM_073362.3| Caenorhabditis elegans Temporarily Assigned Gene name family member
           (tag-135) (tag-135) mRNA, complete cds
          Length = 1559

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 tgtgaccagtcaatgataac 207
           ||||||||||||||||||||
Sbjct: 693 tgtgaccagtcaatgataac 674
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>gb|AF301173.1|AF301173 Petunia integrifolia S12 self-incompatibility ribonuclease gene,
           partial cds
          Length = 492

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  catatcaatggagtacctgaacta 55
           |||||||| |||||||||||||||
Sbjct: 364 catatcaaaggagtacctgaacta 387
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>emb|AL772181.23| Mouse DNA sequence from clone RP23-118H3 on chromosome 2, complete
             sequence
          Length = 219704

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   acacaaagagaaaggggaaa 129
             ||||||||||||||||||||
Sbjct: 27224 acacaaagagaaaggggaaa 27205
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>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0432C03
          Length = 164394

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    cacacaaagagaaaggggaa 128
              ||||||||||||||||||||
Sbjct: 162480 cacacaaagagaaaggggaa 162499



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    cacacaaagagaaaggggaa 128
              ||||||||||||||||||||
Sbjct: 131507 cacacaaagagaaaggggaa 131526
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>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0614D08
          Length = 147548

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cacacaaagagaaaggggaa 128
             ||||||||||||||||||||
Sbjct: 27280 cacacaaagagaaaggggaa 27299
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>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown,
              complete sequence
          Length = 161382

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    attgagaaaaatgcagtcag 163
              ||||||||||||||||||||
Sbjct: 122171 attgagaaaaatgcagtcag 122190
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>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0660F12
          Length = 147203

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cacacaaagagaaaggggaa 128
             ||||||||||||||||||||
Sbjct: 39186 cacacaaagagaaaggggaa 39205



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  cacacaaagagaaaggggaa 128
            ||||||||||||||||||||
Sbjct: 8213 cacacaaagagaaaggggaa 8232
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>gb|AF125442.1| Caenorhabditis elegans fosmid H04M03, complete sequence
          Length = 31818

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aattgagaaaaatgcagtca 162
             ||||||||||||||||||||
Sbjct: 25645 aattgagaaaaatgcagtca 25664
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>dbj|AP001034.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-729B4, complete
              sequence
          Length = 167934

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 509    tatcatgacttactgaggcg 528
              ||||||||||||||||||||
Sbjct: 107868 tatcatgacttactgaggcg 107849
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>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 151057

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   taacaaacatacgaaggaag 29
            ||||||||||||||||||||
Sbjct: 4535 taacaaacatacgaaggaag 4516
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>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete
             sequence
          Length = 163961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   aaagagaaaggggaaataag 133
             ||||||||||||||||||||
Sbjct: 16381 aaagagaaaggggaaataag 16362
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>gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, complete sequence
          Length = 203266

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    cacacaaagagaaaggggaa 128
              ||||||||||||||||||||
Sbjct: 186493 cacacaaagagaaaggggaa 186474
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>emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chromosome X, complete
             sequence
          Length = 191093

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   atgtgtttatctgcagcaga 383
             ||||||||||||||||||||
Sbjct: 97048 atgtgtttatctgcagcaga 97029
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>emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chromosome 4, complete
             sequence
          Length = 190214

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   gtgtttatctgcagcagaaa 385
             ||||||||||||||||||||
Sbjct: 33923 gtgtttatctgcagcagaaa 33904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,190,166
Number of Sequences: 3902068
Number of extensions: 5190166
Number of successful extensions: 98523
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98268
Number of HSP's gapped (non-prelim): 255
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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