Clone Name | rbah61g12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181063 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 acgtacgcatgcacatgcaa 77 |||||||||||||||||||| Sbjct: 56926 acgtacgcatgcacatgcaa 56945
>gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179838 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acgtacgcatgcacatgcaa 77 |||||||||||||||||||| Sbjct: 53186 acgtacgcatgcacatgcaa 53167
>gb|AY060306.1| Drosophila melanogaster GH15083 full length cDNA Length = 3421 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acgtacgcatgcacatgcaa 77 |||||||||||||||||||| Sbjct: 422 acgtacgcatgcacatgcaa 403
>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete sequence Length = 285860 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acgtacgcatgcacatgcaa 77 |||||||||||||||||||| Sbjct: 237768 acgtacgcatgcacatgcaa 237749
>emb|CR391999.9| Zebrafish DNA sequence from clone CH211-261L7 in linkage group 5, complete sequence Length = 176753 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 atgcacatgcaatacaagc 84 ||||||||||||||||||| Sbjct: 25326 atgcacatgcaatacaagc 25344
>emb|CR382323.8| Zebrafish DNA sequence from clone DKEY-226M8 in linkage group 5, complete sequence Length = 143411 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 atgcacatgcaatacaagc 84 ||||||||||||||||||| Sbjct: 139307 atgcacatgcaatacaagc 139325
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 gcatgcacatgcaatacaa 82 ||||||||||||||||||| Sbjct: 951880 gcatgcacatgcaatacaa 951862
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ttacgtacgtacgcatgca 70 ||||||||||||||||||| Sbjct: 32303707 ttacgtacgtacgcatgca 32303725
>gb|AC007215.49| Homo sapiens 12 BAC RP11-59H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122001 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ggatgggatgtagcactgg 116 ||||||||||||||||||| Sbjct: 94770 ggatgggatgtagcactgg 94788
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ttacgtacgtacgcatgca 70 ||||||||||||||||||| Sbjct: 147720 ttacgtacgtacgcatgca 147738
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ttacgtacgtacgcatgca 70 ||||||||||||||||||| Sbjct: 79539 ttacgtacgtacgcatgca 79557
>gb|AF170726.2| Myxoma virus strain Lausanne, complete genome Length = 161773 Score = 38.2 bits (19), Expect = 7.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 ttacgtacgtacgcatgca 70 ||||||||||||||||||| Sbjct: 77642 ttacgtacgtacgcatgca 77660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 600,369 Number of Sequences: 3902068 Number of extensions: 600369 Number of successful extensions: 37222 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37165 Number of HSP's gapped (non-prelim): 57 length of query: 161 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 139 effective length of database: 17,147,199,772 effective search space: 2383460768308 effective search space used: 2383460768308 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)