Clone Name
rbah61g11
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c...
1094
0.0
2 emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr...
1043
0.0
3 emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp...
892
0.0
4 emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur...
852
0.0
5 dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
680
0.0
6 dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
640
e-180
7 emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur...
573
e-160
8 emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr...
563
e-157
9 emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat...
543
e-151
10 gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo...
543
e-151
11 gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo...
513
e-142
12 dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
511
e-142
13 dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph...
509
e-141
14 dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
507
e-140
15 dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r...
502
e-139
16 dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha...
502
e-139
17 dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat...
502
e-139
18 dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp...
502
e-139
19 dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp...
502
e-139
20 dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate...
494
e-136
21 dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat...
494
e-136
22 dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho...
494
e-136
23 dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
494
e-136
24 dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha...
494
e-136
25 dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
494
e-136
26 dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
494
e-136
27 dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
486
e-134
28 dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph...
486
e-134
29 dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
486
e-134
30 dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
486
e-134
31 dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
486
e-134
32 dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
486
e-134
33 dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
484
e-133
34 dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r...
478
e-131
35 dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho...
478
e-131
36 dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
478
e-131
37 dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
478
e-131
38 dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
470
e-129
39 dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp...
470
e-129
40 dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph...
470
e-129
41 dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
470
e-129
42 dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
470
e-129
43 dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
470
e-129
44 gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph...
466
e-128
45 dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
462
e-127
46 dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib...
462
e-127
47 gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi...
460
e-126
48 gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat...
458
e-125
49 gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate...
458
e-125
50 gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos...
458
e-125
51 dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate...
454
e-124
52 gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi...
452
e-124
53 gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi...
452
e-124
54 gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi...
450
e-123
55 gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha...
450
e-123
56 dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
450
e-123
57 gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp...
446
e-122
58 gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ...
444
e-121
59 dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
444
e-121
60 dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib...
444
e-121
61 gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos...
442
e-121
62 gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat...
442
e-121
63 gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph...
434
e-118
64 gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca...
434
e-118
65 gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp...
418
e-113
66 gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate...
404
e-109
67 gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp...
400
e-108
68 gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca...
400
e-108
69 dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c...
400
e-108
70 gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat...
396
e-107
71 dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clon...
327
3e-86
72 dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clon...
327
3e-86
73 dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clon...
327
3e-86
74 dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clon...
327
3e-86
75 dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mR...
327
3e-86
76 gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisp...
319
7e-84
77 gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate ca...
311
2e-81
78 gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1...
303
4e-79
79 dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clon...
303
4e-79
80 gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate ca...
303
4e-79
81 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
291
1e-75
82 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
291
1e-75
83 emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa...
291
1e-75
84 dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clon...
287
2e-74
85 dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mR...
280
6e-72
86 emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523...
270
5e-69
87 gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate ca...
250
5e-63
88 emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate...
212
1e-51
89 gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate ...
139
1e-29
90 emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxy...
137
5e-29
91 emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subuni...
137
5e-29
92 emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small sub...
131
3e-27
93 emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small sub...
131
3e-27
94 emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subu...
131
3e-27
95 emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subu...
131
3e-27
96 dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clon...
129
1e-26
97 dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clon...
129
1e-26
98 gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxyl...
125
2e-25
99 emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ri...
123
8e-25
100 emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subu...
115
2e-22
101 gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphos...
101
3e-18
102 gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1...
101
3e-18
103 dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate...
98
4e-17
104 gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1...
98
4e-17
105 gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose ...
98
4e-17
106 gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose ...
98
4e-17
107 gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphos...
98
4e-17
108 gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, ...
96
2e-16
109 emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene
96
2e-16
110 dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO...
94
7e-16
111 emb|X65494.1|MSCARB Malus (unidentified species of crab apple) m...
94
7e-16
112 gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5-...
94
7e-16
113 gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate...
92
3e-15
114 gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphospha...
90
1e-14
115 gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphat...
90
1e-14
116 gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphat...
90
1e-14
117 gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose ...
90
1e-14
118 gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose ...
90
1e-14
119 gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphos...
90
1e-14
120 gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphos...
90
1e-14
121 ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carb...
86
2e-13
122 ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carb...
86
2e-13
123 gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom...
86
2e-13
124 gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825)...
86
2e-13
125 gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
126 gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
2e-13
127 gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
128 gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
129 gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
130 gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
131 gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
132 gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
2e-13
133 gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
2e-13
134 gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
135 gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
86
2e-13
136 gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, co...
86
2e-13
137 gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A...
86
2e-13
138 gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090...
86
2e-13
139 gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
86
2e-13
140 emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Co...
86
2e-13
141 emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Co...
86
2e-13
142 emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Co...
86
2e-13
143 emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Co...
86
2e-13
144 gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, comp...
86
2e-13
145 emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphat...
86
2e-13
146 emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for...
86
2e-13
147 emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for r...
86
2e-13
148 emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate c...
86
2e-13
149 gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
2e-13
150 gb|AY103730.1| Zea mays PCO095823 mRNA sequence
86
2e-13
151 gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose...
86
2e-13
152 emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ...
86
2e-13
153 gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate ca...
86
2e-13
154 gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5-...
86
2e-13
155 dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphat...
86
2e-13
156 gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbc...
86
2e-13
157 gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2...
86
2e-13
158 gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseu...
84
7e-13
159 gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseu...
84
7e-13
160 gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseu...
84
7e-13
161 gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylas...
84
7e-13
162 ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carb...
82
3e-12
163 ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carb...
82
3e-12
164 ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate c...
82
3e-12
165 gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carbo...
82
3e-12
166 gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, com...
82
3e-12
167 gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791)...
82
3e-12
168 gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b su...
82
3e-12
169 gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphospha...
82
3e-12
170 emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate ...
82
3e-12
171 emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene)
82
3e-12
172 gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, com...
82
3e-12
173 gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 m...
82
3e-12
174 gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, compl...
82
3e-12
175 gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carbox...
82
3e-12
176 gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carbox...
82
3e-12
177 gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
82
3e-12
178 gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
82
3e-12
179 gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphat...
82
3e-12
180 emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
181 emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
182 emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
183 emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
184 emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
185 emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
186 emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
187 emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Co...
82
3e-12
188 gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676)
82
3e-12
189 dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
82
3e-12
190 gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1...
82
3e-12
191 gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose ...
82
3e-12
192 gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose ...
82
3e-12
193 gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseud...
82
3e-12
194 gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphos...
82
3e-12
195 gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate car...
80
1e-11
196 gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate car...
80
1e-11
197 gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate car...
80
1e-11
198 gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carbo...
80
1e-11
199 gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphos...
80
1e-11
200 emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 ...
78
4e-11
201 emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulos...
78
4e-11
202 gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carbox...
78
4e-11
203 gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphospha...
78
4e-11
204 emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,...
78
4e-11
205 gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylas...
76
2e-10
206 gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate c...
76
2e-10
207 gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphat...
76
2e-10
208 gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphos...
76
2e-10
209 emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Co...
76
2e-10
210 gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
211 gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
212 gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
213 gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
214 gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
215 gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate...
76
2e-10
216 emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subu...
74
6e-10
217 emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Co...
74
6e-10
218 emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Co...
74
6e-10
219 dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulo...
74
6e-10
220 emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco s...
74
6e-10
221 emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate...
74
6e-10
222 emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-bip...
74
6e-10
223 gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulo...
74
6e-10
224 gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose...
74
6e-10
225 gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,...
74
6e-10
226 gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5...
74
6e-10
227 gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,...
74
6e-10
228 gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1...
74
6e-10
229 gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-...
74
6e-10
230 gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulo...
74
6e-10
231 gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribu...
74
6e-10
232 gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribul...
74
6e-10
233 gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,...
74
6e-10
234 gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,...
74
6e-10
235 gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphospha...
74
6e-10
236 dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisp...
74
6e-10
237 gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosp...
72
3e-09
238 gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (T...
72
3e-09
239 gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5...
72
3e-09
240 gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5...
72
3e-09
241 gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5...
72
3e-09
242 gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphat...
72
3e-09
243 gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carb...
72
3e-09
244 emb|X17546.1|EGRBCS Euglena gracilis rbcS mRNA for the small sub...
72
3e-09
245 emb|X79152.1|EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19
72
3e-09
246 gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxyla...
72
3e-09
247 gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6...
72
3e-09
248 dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose...
72
3e-09
249 ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carb...
70
1e-08
250 gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence
70
1e-08
251 emb|X16435.1|SARUBISC Mustard Rubisco mRNA for the small subunit...
70
1e-08
252 emb|X61097.1|BNRBCS B.napus rbcS gene for the small subunit of r...
70
1e-08
253 gb|AY093288.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
254 gb|AY062543.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
255 gb|AY062458.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
256 gb|AY062437.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
257 gb|AY059939.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
258 gb|BT003356.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
259 gb|BT002554.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
260 emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphos...
70
1e-08
261 emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bispho...
70
1e-08
262 emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bispho...
70
1e-08
263 emb|X03820.1|PERBCS08 Petunia x hybrida rbcS gene (ssu8) for rib...
70
1e-08
264 emb|X75334.1|BNRBCSSW B.napus (Semundo winterraps) rbcS gene
70
1e-08
265 emb|X06558.1|SRRBCS Radish mRNA for ribulose 1,5 bisphoshate car...
70
1e-08
266 gb|BT002094.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
1e-08
267 gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosp...
70
1e-08
268 gb|M29643.1|PETRBCC Petunia ribulose 1,5-bisphosphate carboxylas...
70
1e-08
269 dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylas...
70
1e-08
270 gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carbo...
68
4e-08
271 gb|AY267674.1| Bigelowiella natans ribulose-1,5-bisphosphate car...
68
4e-08
272 emb|X66617.1|EGRBCS5 Euglena gracilis partial rbcS gene for ribu...
68
4e-08
273 emb|AJ538400.1|NTA538400 Nicotiana tabacum cDNA-AFLP-fragment BC...
68
4e-08
274 gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate ...
68
4e-08
275 gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxy...
68
4e-08
276 gb|U29933.1|FPU29933 Flaveria pringlei ribulose-1,5-bisphosphate...
68
4e-08
277 gb|M16888.1|SIPRUBPCS White campion ribulose bisphosphate carbox...
68
4e-08
278 dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate ...
68
4e-08
279 gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, comp...
66
2e-07
280 emb|AJ786661.1| Limonium gibertii mRNA for ribulose 1,5 bisphosp...
66
2e-07
281 gb|AF396697.1| Nicotiana benthamiana s/s2 mRNA, partial cds
66
2e-07
282 emb|BX841713.1|CNS09YLJ Arabidopsis thaliana Full-length cDNA Co...
66
2e-07
283 dbj|AB120708.1| Physcomitrella patens subsp. patens PprbcS1 mRNA...
66
2e-07
284 emb|X69763.1|STRBCS3 S.tuberosum rbcS3 gene for ribulose-(1,5)-b...
66
2e-07
285 gb|AF162210.1|AF162210 Lactuca sativa ribulose-1,5-bisphosphate ...
66
2e-07
286 gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate...
66
2e-07
287 gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxyla...
66
2e-07
288 dbj|AU066498.1| Chlamydomonas sp. HS-5 mRNA for ribulose-bisphos...
66
2e-07
289 gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosph...
64
6e-07
290 emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisph...
64
6e-07
291 gb|AY220079.1| Nicotiana tabacum putative ribulose bisphosphate ...
64
6e-07
292 dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA ...
64
6e-07
293 emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small s...
64
6e-07
294 emb|X60000.1|PVRBCOS P.vulgaris rbcS mRNA for small subunit of r...
64
6e-07
295 emb|X59999.1|PVRBCS P.vulgaris rbcS mRNA for small subunit of ri...
64
6e-07
296 emb|X98414.1|PVRBCS4SS P.vittata mRNA for rubisco small subunit,...
64
6e-07
297 emb|X57022.1|PVSS15BCO P. vulgaris rbcS cDNA (with intronic sequ...
64
6e-07
298 gb|AF173667.1|AF173667 Beta vulgaris clone RUB109UNI ribulose bi...
64
6e-07
299 gb|AF101231.1|AF101231 Manihot esculenta clone R33 ribulose 1,5-...
64
6e-07
300 gb|AF101228.1|AF101228 Manihot esculenta clone R214 ribulose 1,5...
64
6e-07
301 emb|X84730.1|ASRBCS Artificial rbcS gene sequence
64
6e-07
302 gb|M96583.1|MNHRUBISCO Manihot esculenta ribulose 1,5-bisphospha...
64
6e-07
303 gb|U39858.1|GTU39858 Glycine tabacina ribulose 1,5-bisphosphate ...
64
6e-07
304 gb|M95930.1|MNHRBCSA Manihot esculenta (clone rubssr37) ribulose...
64
6e-07
305 gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5-...
64
6e-07
306 gb|DQ226760.1| Boechera divaricarpa isolate SLW-D-H02 mRNA sequence
62
2e-06
307 emb|AJ843972.1| Plantago major mRNA for Rubisco SSU (rbcs1 gene)
62
2e-06
308 dbj|AB240146.1| Chlorella pyrenoidosa rbcS mRNA for RuBisCO smal...
62
2e-06
309 emb|X53426.1|NSRUBSSU Nicotiana sylvestris NySS41 and partial Ny...
62
2e-06
310 emb|X69762.1|STRBCS2C S.tuberosum rbcS2c gene for ribulose-(1,5)...
62
2e-06
311 emb|X69761.1|STRBCS2B S.tuberosum rbcS2b gene for ribulose-(1,5)...
62
2e-06
312 emb|X69760.1|STRBCS2 S.tuberosum rbcS2 gene for ribulose-(1,5)-b...
62
2e-06
313 gb|M16056.1|CUSSSU Cucumber SSU mRNA encoding ribulose bisphosph...
62
2e-06
314 gb|DQ242646.1| Brassica napus chloroplast ribulose-1,5-bisphosph...
62
2e-06
315 gb|AY530156.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate ...
60
1e-05
316 gb|AY530155.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate ...
60
1e-05
317 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
60
1e-05
318 dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D...
60
1e-05
319 dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic D...
60
1e-05
320 emb|Y00431.1|HARBCS Sunflower rbcS gene for RuBP carboxylase sma...
60
1e-05
321 emb|X13974.1|CMRBPC Chlamydomonas moewusii rbcS mRNA for ribulos...
60
1e-05
322 emb|X05079.1|HARUBISC Sunflower mRNA for ribulose 1,5-bisphospha...
60
1e-05
323 dbj|AK059909.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
1e-05
324 gb|U80810.1|CSU80810 Chloromonas sp. ANT3 ribulose-1,5-bisphosph...
60
1e-05
325 gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate car...
58
4e-05
326 gb|AF139469.2|AF139469 Vigna radiata ribulose-1,5-bisphosphate c...
58
4e-05
327 emb|X51811.1|AMRBCSM1 Acetabularia mediterranea mRNA for ribulos...
58
4e-05
328 emb|Z28640.1|ACRBPCX Acetabularia cliftonii gene for ribulose-1-...
58
4e-05
329 emb|Z28636.1|ACRUBIS Acetabularia cliftonii gene for ribulose-1,...
58
4e-05
330 emb|X05982.1|LERBCS1 Tomato rbcS1 gene for ribulose 1,5-bisphosp...
58
4e-05
331 emb|X54465.1|LLRBC7CM L.laricina mRNA for ribulose bisphosphate ...
58
4e-05
332 emb|X54464.1|LLRBC5CM L.laricina mRNA for ribulose bisphosphate ...
58
4e-05
333 emb|X54462.1|LLRBC3CM L.laricina mRNA for ribulose bisphosphate ...
58
4e-05
334 emb|X54460.1|LLRBC1C L.laricina mRNA for ribulose bisphosphate c...
58
4e-05
335 emb|X77813.1|PVRBCSG P.vittata rbcS gene
58
4e-05
336 emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-ca...
58
4e-05
337 emb|X73136.1|PTRBC P.vittata mRNA for rubisco, small subunit
58
4e-05
338 gb|M15235.1|TOMRBCSD Tomato RuBP carboxylase small subunit LESS1...
58
4e-05
339 gb|M13542.1|TOMRBCSA Tomato (L.esculentum) ribulose-1,5-bisphosp...
58
4e-05
340 gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate c...
58
4e-05
341 gb|DQ178607.1| Haematococcus pluvialis ribulose-1,5-bisphosphate...
56
2e-04
342 gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete s...
56
2e-04
343 gb|AF493617.1| Acetabularia acetabulum ribulose-1,5-bisphosphate...
56
2e-04
344 gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-b...
56
2e-04
345 emb|X51814.1|AMRBCSM4 Acetabularia mediterranea mRNA for ribulos...
56
2e-04
346 emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphospha...
56
2e-04
347 gb|L26605.1|SLARBCS Stellaria longipes ribulose-1,5-bisphosphate...
56
2e-04
348 gb|M60274.1|HEVRBSS Hevea brasiliensis ribulose-1,5-bisphosphate...
56
2e-04
349 emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose ...
54
6e-04
350 gb|AF044397.1|AF044397 Flaveria ramosissima ribulose-1,5-bisphos...
54
6e-04
351 gb|U83979.1|PMU83979 Populus maximowiczii X Populus balsamifera ...
54
6e-04
352 emb|X51813.1|AMRBCSM3 Acetabularia mediterranea mRNA for ribulos...
54
6e-04
353 emb|X51812.1|AMRBCSM2 Acetabularia mediterranea partial mRNA for...
54
6e-04
354 gb|M32420.1|TOBRUBPB Tobacco ribulose-1,5-bisphosphate carboxyla...
54
6e-04
355 gb|M29641.1|PETRBCA Petunia ribulose 1,5-bisphosphate carboxylas...
54
6e-04
356 emb|X92858.1|BPRBCS B.pendula rbcS gene
52
0.002
357 gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bis...
52
0.002
358 emb|X54091.1|GHRBCS G.hirsutum rbcS gene for ribulose-1,5-bispho...
52
0.002
359 dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
360 emb|Y07779.1|BPRBCSSU Betula pendula mRNA for ribulose-1,5-bisph...
52
0.002
361 gb|U05590.1|ASU05590 Anabaena sp. ribulose 1,5-bisphosphate carb...
52
0.002
362 gb|J01256.1|PEARBPC Pisum sativum ribulose-1,5-bisphosphate carb...
50
0.009
363 gb|M25613.1|PEARUBP2 Pisum sativum ribulose 1,5 bisphosphate car...
50
0.009
364 emb|X04334.1|PSRBCS3C Pea rbcS-3C gene for ribulose 1.5-bisphosp...
50
0.009
365 emb|X04333.1|PSRBCS3A Pea rbcS-3A gene for ribulose 1.5-bisphosp...
50
0.009
366 emb|X00806.1|PSRC01 Pea gene for rib-1,5-bisphospate carboxylase...
50
0.009
367 emb|X54463.1|LLRBC4CM L.laricina mRNA for ribulose bisphosphate ...
50
0.009
368 gb|J01257.1|PEARUBPA Pea (P.sativum) ribulose 1,5-bisphosphate c...
50
0.009
369 gb|BT013023.1| Lycopersicon esculentum clone 114270R, mRNA sequence
48
0.037
370 emb|X04471.1|CRRBCS1 Chlamydomonas reinhardtii nuclear gene rbcS...
48
0.037
371 gb|AY267675.1| Bigelowiella natans ribulose-1,5-bisphosphate car...
48
0.037
372 gb|AY205158.1| Volvox carteri ribulose-bisphosphate carboxylase ...
48
0.037
373 emb|X04472.1|CRRBCS2 Chlamydomonas reinhardtii nuclear gene rbcS...
48
0.037
374 emb|AJ131050.1|CAR131050 Cicer arietinum mRNA for ribulose 1,5-b...
48
0.037
375 emb|X51808.1|ACRBCSC3 Acetabularia cliftonii mRNA for ribulose 1...
48
0.037
376 emb|X05983.1|LERBCS2 Tomato rbcS2 gene for ribulose 1,5-bisphosp...
48
0.037
377 emb|X69759.1|STRBCS1 S.tuberosum rbcS1 gene for ribulose-(1,5)-b...
48
0.037
378 gb|M15236.1|TOMRBCSE Tomato RuBP carboxylase small subunit LESS5...
48
0.037
379 gb|M13543.1|TOMRBCSB Tomato (L.esculentum) ribulose-1,5-bisphosp...
48
0.037
380 gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, com...
46
0.15
381 gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, com...
46
0.15
382 emb|AJ538410.1|NTA538410 Nicotiana tabacum cDNA-AFLP-fragment BC...
46
0.15
383 emb|X96847.1|MSRBCSK1A M.sativa Rbcsk-1A gene
46
0.15
384 gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, co...
44
0.58
385 ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family,...
44
0.58
386 ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical prote...
44
0.58
387 gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, p...
44
0.58
388 gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, p...
44
0.58
389 dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f...
44
0.58
390 gb|AY048671.1| Sequoia sempervirens ribulose-1,5-bisphosphate ca...
44
0.58
391 dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu...
44
0.58
392 dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN ...
44
0.58
393 dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIK...
44
0.58
394 dbj|AB125314.1| Nannochloris bacillaris NbrbcS2, Akl, NbSep, PAB...
44
0.58
395 emb|X54461.1|LLRBC2CM L.laricina mRNA for ribulose bisphosphate ...
44
0.58
396 dbj|AP006376.1| Lotus japonicus genomic DNA, chromosome 1, clone...
44
0.58
397 dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS ge...
44
0.58
398 emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro...
42
2.3
399 emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch...
42
2.3
400 emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch...
42
2.3
401 emb|AL161790.23| Human DNA sequence from clone RP11-558L8 on chr...
42
2.3
402 emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ...
42
2.3
403 gb|AF411547.1| Medicago sativa ribulose-1,5-bisphosphate carboxy...
42
2.3
404 gb|AF150667.1|AF150667 Amaranthus hypochondriacus ribulose 1,5 b...
42
2.3
405 gb|AF056315.1|AF056315 Medicago sativa ribulose-1,5-bisphosphate...
42
2.3
406 gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ...
42
2.3
407 emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch...
42
2.3
408 dbj|AB047542.1| Lilium longiflorum rbcS mRNA for ribulose 1,5 bi...
42
2.3
409 gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, c...
40
9.1
410 ref|XM_515973.1| PREDICTED: Pan troglodytes similar to disrupted...
40
9.1
411 gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, co...
40
9.1
412 gb|AC138395.8| Mus musculus chromosome 3, clone RP24-128I24, com...
40
9.1
413 gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr...
40
9.1
414 gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, comp...
40
9.1
415 gb|AY531637.1| Solemya velum gill symbiont ribulose-1,5-bisphosp...
40
9.1
416 gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's ...
40
9.1
417 gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, c...
40
9.1
418 ref|XM_955568.1| Neurospora crassa OR74A hypothetical protein (N...
40
9.1
419 gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co...
40
9.1
420 ref|XM_327018.1| Neurospora crassa OR74A hypothetical protein (N...
40
9.1
421 ref|NM_052952.1| Homo sapiens disrupted in renal carcinoma 1 (DI...
40
9.1
422 gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, co...
40
9.1
423 gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete se...
40
9.1
424 ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 p...
40
9.1
425 gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet...
40
9.1
426 ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical pro...
40
9.1
427 emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch...
40
9.1
428 emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom...
40
9.1
429 gb|AC159968.3| Mus musculus chromosome 3, clone RP23-256J12, com...
40
9.1
430 emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom...
40
9.1
431 ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA
40
9.1
432 gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105...
40
9.1
433 emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i...
40
9.1
434 gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839...
40
9.1
435 gb|AC011419.7| Homo sapiens chromosome 5 clone CTD-2029I9, compl...
40
9.1
436 emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ...
40
9.1
437 gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp...
40
9.1
438 gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, comp...
40
9.1
439 gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp...
40
9.1
440 gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ...
40
9.1
441 gb|AY039013.1|AY039012S2 Homo sapiens disrupted in renal cancer ...
40
9.1
442 gb|AY039011.1| Homo sapiens disrupted in renal cancer protein (D...
40
9.1
443 gb|AC148659.1| Macaca mulatta Major Histocompatibility Complex B...
40
9.1
444 dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia...
40
9.1
445 gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom...
40
9.1
446 gb|AC079613.7| Homo sapiens BAC clone RP11-325O22 from 2, comple...
40
9.1
447 gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, com...
40
9.1
448 emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch...
40
9.1
449 dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.1
450 dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.1
451 emb|X51810.1|ACRBCSC5 Acetabularia cliftonii mRNA for ribulose 1...
40
9.1
452 emb|X51807.1|ACRBCSC2 Acetabularia cliftonii partial mRNA ribulo...
40
9.1
453 emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1...
40
9.1
454 emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr...
40
9.1
455 dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:...
40
9.1
456 gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, comple...
40
9.1
457 emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr...
40
9.1
458 emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chro...
40
9.1
459 emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-6...
40
9.1
460 emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chrom...
40
9.1
>gb| U43493.1 |HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 816
Score = 1094 bits (552), Expect = 0.0
Identities = 645/663 (97%), Gaps = 11/663 (1%)
Strand = Plus / Minus
Query: 1 ttaattactncgaatacatattacatagtcgacagattgtataatattatgtgcatgtgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttaattact-cgaatacatattacatagtcgacagattgtataatattatgtgcatgtgc 729
Query: 61 atatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgttggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 728 atatacatagccaccgatagcattcacatacgagcatgctttctcgagc-atgttggtac 670
Query: 121 atgaacatgggcatacacacatttttaggaacaaataagaaagataatggagaaggaaaa 180
||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 669 atgaacatgggactacacacatttt-aggaacaa-taagaaagataatggagaaggaaaa 612
Query: 181 cccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtca 240
|| ||||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||
Sbjct: 611 cc--aagca-tgtcagagttgacaaa-ctgcaatggcactt-atatgtg-cccatcgtca 558
Query: 241 gtgagctgtttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagct 300
||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||
Sbjct: 557 gtgagctgtttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagct 498
Query: 301 gacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggta 438
Query: 361 ctccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacat 378
Query: 421 aggcagcttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggcagcttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctc 318
Query: 481 acggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 acggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcag 258
Query: 541 gtagtcgacctgcttaaggagggccctccgtgctgagtggtggcaagtaagacagggtct 600
||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||
Sbjct: 257 gtagtcgacctgcttaaggaggg-cctccgtgctgagtggtggaaggtaagacagggtct 199
Query: 601 cgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgc 139
Query: 661 tga 663
|||
Sbjct: 138 tga 136
>emb| AJ131738.1 |SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
Length = 875
Score = 1043 bits (526), Expect = 0.0
Identities = 609/634 (96%), Gaps = 2/634 (0%)
Strand = Plus / Minus
Query: 31 gacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacata 90
|||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 834 gacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacata 775
Query: 91 cgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagga 150
|||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 774 cgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattcttagga 715
Query: 151 acaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgacaaaact 209
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 714 acaaataagaaagataaatggacaaggaaaacccaaagcaatgtcagagttgacaaaact 655
Query: 210 gcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcct 269
|||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||
Sbjct: 654 gcaatggcactttatatgcggcccgtggtgagtgagctgtttatgccttgccggactcct 595
Query: 270 cgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcga 329
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 594 cgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctggcgcatgttgtcga 535
Query: 330 atccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttga 389
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atccgatgatgcggacgtacgcgtcagggtactccttcttgacctcctccacctcgttga 475
Query: 390 gcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggc 449
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtaccggc 415
Query: 450 catcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaact 509
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 catcgtagtacccgggagacgcgttgtgctcacggaagatgaacccaaccttgctgaact 355
Query: 510 cgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggccctcc 569
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 354 cgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttgaggaggg-cctcc 296
Query: 570 gtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccac 629
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gtggtgagcggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccac 236
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||||||||
Sbjct: 235 acctgcatgcacctgatccttccaccgttgctga 202
>emb| X83095.1 |ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase, small subunit
Length = 837
Score = 892 bits (450), Expect = 0.0
Identities = 595/638 (93%), Gaps = 4/638 (0%)
Strand = Plus / Minus
Query: 28 gtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcac 87
||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 797 gtcgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcac 738
Query: 88 atacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattttta 147
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||
Sbjct: 737 atacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattctta 678
Query: 148 ggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgacaaa 206
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaa 618
Query: 207 actgcaatggcactttatatgt-ggcccatcgtcagtgagctgtttatgccttgccggac 265
|||||||||||||||| ||| | |||| |||| ||||||||||||| ||||||||||||
Sbjct: 617 actgcaatggcacttt-tatataggcctgtcgtgagtgagctgtttaggccttgccggac 559
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 558 tcctcgcagcccggtggcttggaggcgatgaagctgacggactgcacctgacgcatgttg 499
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||
Sbjct: 498 tcgaatccgatgatgcggcaataggggtcagggtactccttcctgacctcctccacctcg 439
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|| |||||| |||| | ||| ||||||||||||||| || ||||||||||||||||||
Sbjct: 438 gggatcacctgggtgggggcggggcatccgaacatagggagtttccacattgtccagtac 379
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 378 cggccatcgtagtacccaggggatacgttgtgttcacggaagatgaacccaacctttcta 319
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 318 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttaagga-ggcc 260
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 259 ctccgtgctgagcggtggcaagtaggacagggtctcgaacttcttgataccctcgatggg 200
Query: 626 ccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ccacacctgcatgcacctgatccttccaccgttgctga 162
>emb| X00234.1 |TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
Length = 611
Score = 852 bits (430), Expect = 0.0
Identities = 540/573 (94%), Gaps = 4/573 (0%)
Strand = Plus / Minus
Query: 22 tacatagtcgacagattgtataatat--tatgtgcatgtgcatatacatagccaccgata 79
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 573 tacatagtcgacagattgtataatatattatgtgcatgtgcatatacatagccaccgatt 514
Query: 80 gcattcacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacaca 139
||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 513 gcattcacatacgagcacgctttctcgagccatgttgttacatgaacatggacatacaca 454
Query: 140 catttttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagag 198
||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 453 tattcttaggaacaagtaagaaagacaaatggagaaggaaaacccaaagcaatgtcagag 394
Query: 199 ttgacaaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgcctt 258
||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||||
Sbjct: 393 ttgacaaaactgcaatggcactttatatgtggcccgtggtgagtgagctgtttaggcctt 334
Query: 259 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 318
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 333 gccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcactgcacctggcg 274
Query: 319 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 378
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 273 catgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttcttgacctcctc 214
Query: 379 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 438
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 213 cacctcgttgatcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 154
Query: 439 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 498
|||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 153 ccagtagcggccgtcgtagtacccgggagacgcattgtgctcacggaagatgaacccgac 94
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 93 cttgctgaactcaaggcaaggcacccacttggagcggatcaggtagtccacctgcttgag 34
Query: 559 gagggccctccgtgctgagtggtggcaagtaag 591
||||| ||||||||||||| ||||||| |||||
Sbjct: 33 gaggg-cctccgtgctgagcggtggcaggtaag 2
>dbj| AB042066.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p9-1
Length = 739
Score = 680 bits (343), Expect = 0.0
Identities = 374/383 (97%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 616
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 615 tcctccacctcgttgatcacctgtgtggcgtcagtgcacccgaacataggcagcttccac 556
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attgtccaataccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 496
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 436
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 435 ttgaggaggg-cctccgtgctgagcggtggcaggtaagacagggtctcgaacttcttgat 377
Query: 614 gccctcgatgggccacacctgca 636
|||||||||||||||||||||||
Sbjct: 376 gccctcgatgggccacacctgca 354
Score = 67.9 bits (34), Expect = 4e-08
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||||||||
Sbjct: 149 acctgcatgcacctgatccttccaccgttgctga 116
>dbj| AB042064.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p2-1
Length = 653
Score = 640 bits (323), Expect = e-180
Identities = 369/383 (96%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 530
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 529 tcctccacctcgttgatcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 470
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 469 attgtccagtaccggccatcgtagtacccaggggatgcgttgtgctcacggaagataaac 410
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 350
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| ||||||| |||| |||||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 349 ttgaggaggg-cctctgtgctgagcggtggcaggtaggacagggtctcgaacttcttaat 291
Query: 614 gccctcgatgggccacacctgca 636
|||||||||||||||||||||||
Sbjct: 290 gccctcgatgggccacacctgca 268
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||| |||||||||||||||||||||||
Sbjct: 149 acctgcatgcgcctgatccttccaccgttgctga 116
>emb| X00235.1 |TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
4.1.1.39 ribulosebisphosphate carboxylase) clones 234
and 406
Length = 743
Score = 573 bits (289), Expect = e-160
Identities = 344/361 (95%), Gaps = 1/361 (0%)
Strand = Plus / Minus
Query: 25 atagtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcatt 84
|||||||||| |||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 719 atagtcgacatattgtataatattatgcgtccgttcatatacatagccaccgatagcatt 660
Query: 85 cacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattt 144
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 659 ctcatacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattc 600
Query: 145 ttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgac 203
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgac 540
Query: 204 aaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccgg 263
||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||
Sbjct: 539 aaaactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgccgg 480
Query: 264 actcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgt 323
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 actcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgt 420
Query: 324 tgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacct 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacct 360
Query: 384 c 384
|
Sbjct: 359 c 359
Score = 353 bits (178), Expect = 5e-94
Identities = 197/202 (97%), Gaps = 1/202 (0%)
Strand = Plus / Minus
Query: 462 caggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggca 521
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caggtgatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggca 222
Query: 522 cccacttggagcggatcaggtagtcgacctgcttaaggagggccctccgtgctgagtggt 581
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||
Sbjct: 221 cccacttggagcggatcaggtagtcgacctgcttgaggaggg-cctccgtgctgagcggt 163
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ggcaggtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 103
Query: 642 ctgatccttccaccgttgctga 663
||||||||||||||||||||||
Sbjct: 102 ctgatccttccaccgttgctga 81
>emb| AJ131737.1 |SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
Length = 845
Score = 563 bits (284), Expect = e-157
Identities = 383/415 (92%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 249 tttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcact 308
|||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537
Query: 309 gcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttct 368
||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct: 536 gcacctggcgcatgttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 477
Query: 369 tgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagct 428
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||
Sbjct: 476 tgacctcctccacctcattgagcacctgcgtggcgtcggtgcacccgaacataggcaact 417
Query: 429 tccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaaga 488
|||||||||||||||| || || ||||||||||| || || |||||||||||||||||
Sbjct: 416 tccacattgtccagtatcgaccgtcgtagtacccgggggagttgttgtgctcacggaaga 357
Query: 489 tgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcga 548
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 356 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcga 297
Query: 549 cctgcttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttc 608
||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 296 cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttc 238
Query: 609 ttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 237 ttgatgccctcaattggccacacctgcatgcatctgatccttccgccgttgctga 183
>emb| AJ635206.1 | Triticum durum ssp. durum partial mRNA for putative rubisco small
subunit (rbcS gene)
Length = 518
Score = 543 bits (274), Expect = e-151
Identities = 377/410 (91%), Gaps = 1/410 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
|||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 395
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 394 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 335
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
||||||||||| || || || ||||| || || || |||||||||||||||| |||
Sbjct: 334 attgtccagtatcgaccgtcatagtatccgggggagctattgtgctcacggaagacgaaa 275
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 274 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 215
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| ||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct: 214 ttcaggaggg-cctccgtggagaggggtggcaggtaagacagggtctcgaacttcttgat 156
Query: 614 gccctcgatgggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 155 gccctcaatcggccacacctgcatgcacctgatccttccgccgttgctga 106
>gb| M37477.1 |WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
(RUBISCO) gene, complete cds
Length = 779
Score = 543 bits (274), Expect = e-151
Identities = 377/410 (91%), Gaps = 1/410 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 521 tggcgcatgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttcttaacc 462
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 461 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 402
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
||||||||||| || || ||||||||||| || || ||||||||||||||||| |||
Sbjct: 401 attgtccagtatcgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 342
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 341 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 282
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| | ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 281 ttcaagaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgat 223
Query: 614 gccctcgatgggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||| || ||||||||||||||||| ||||||||||| || |||||||
Sbjct: 222 gccctcaattggccacacctgcatgcatctgatccttccgccattgctga 173
>gb| M37328.1 |WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
gene, exons 1 and 2
Length = 2205
Score = 513 bits (259), Expect = e-142
Identities = 356/387 (91%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 248 gtttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcac 307
||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 1511 gtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 1452
Query: 308 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 367
|||||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||
Sbjct: 1451 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1392
Query: 368 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagc 427
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1391 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagc 1332
Query: 428 ttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaag 487
||||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||
Sbjct: 1331 ttccacattgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaag 1272
Query: 488 atgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcg 547
| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1271 acgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcg 1212
Query: 548 acctgcttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaactt 607
|||||||| ||||| | |||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 1211 acctgcttcgagaggg-cttccgtggagaggggtggcaagtaagacagggtctcaaactt 1153
Query: 608 cttgatgccctcgatgggccacacctg 634
|||||||||||| || |||||||||||
Sbjct: 1152 cttgatgccctcaattggccacacctg 1126
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| ||||||||||
Sbjct: 841 acctgcatgcacctgatccttccgccgttgctga 808
>dbj| AB042065.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase Small subunit, complete cds,
clone:p6-1
Length = 638
Score = 511 bits (258), Expect = e-142
Identities = 354/382 (92%), Gaps = 3/382 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
|||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 515
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 514 tcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 455
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaa 492
||||||||||| || || ||||||||||| |||| || ||||||||||||||||| |||
Sbjct: 454 attgtccagtatcgaccgtcgtagtaccc-ggaggagctgttgtgctcacggaagacgaa 396
Query: 493 cccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctg 552
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 395 gccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcgacctg 336
Query: 553 cttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttga 612
||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 335 cttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttga 277
Query: 613 tgccctcgatgggccacacctg 634
||||||| || |||||||||||
Sbjct: 276 tgccctcaatcggccacacctg 255
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 146 acctgcatgcacctgatccttccgccattgctga 113
>dbj| AB020944.1 | Agropyron intermedium DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Agr-A
Length = 604
Score = 509 bits (257), Expect = e-141
Identities = 342/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB042069.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:6, subclone:16
Length = 5980
Score = 507 bits (256), Expect = e-140
Identities = 358/388 (92%), Gaps = 3/388 (0%)
Strand = Plus / Minus
Query: 248 gtttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcac 307
||||| |||||||| ||||||||||| || |||||| |||| ||||||||||||||||||
Sbjct: 1265 gtttaggccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcac 1206
Query: 308 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 367
|||||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||
Sbjct: 1205 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1146
Query: 368 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagc 427
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1145 ttgacctcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagc 1086
Query: 428 ttccacattgtccagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaa 486
||||||||||||||||| || || ||||||||||| |||| || |||||||||||||||
Sbjct: 1085 ttccacattgtccagtatcgaccgtcgtagtaccc-ggaggagctgttgtgctcacggaa 1027
Query: 487 gatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtc 546
|| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1026 gacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtc 967
Query: 547 gacctgcttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaact 606
||||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 966 gacctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaact 908
Query: 607 tcttgatgccctcgatgggccacacctg 634
||||||||||||| || |||||||||||
Sbjct: 907 tcttgatgccctcaatcggccacacctg 880
Score = 321 bits (162), Expect = 2e-84
Identities = 295/338 (87%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 285 tgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 344
|||||| |||||| ||||||| |||||||| | |||||||||||| ||| |||| |||
Sbjct: 5632 tgaaggtgatgaaagtgacgcaatgcacctggcacatgttgtcgaagccgttgataagga 5573
Query: 345 catacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgt 404
|||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5572 catagccgtcaaggtactccttcttgacctcctccacctccttgagcacctgtgtggcgt 5513
Query: 405 cggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccag 464
| ||||| ||||||||||||| ||||||| |||||| ||| | |||||| ||||||||||
Sbjct: 5512 cagtgcacccgaacataggcaacttccactttgtccggtatcagccatcatagtacccag 5453
Query: 465 gagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcaccc 524
| || |||||||||||||||| ||| | ||||||||||| |||||||| |||||||
Sbjct: 5452 gggagttattgtgctcacggaagacgaagctgaccttgctgaagtcgaggcagggcaccc 5393
Query: 525 acttggagcggatcaggtagtcgacctgcttaaggagggccctccgtgctgagtggtggc 584
||||||||||||||||||||| ||||||| ||||||||| |||| || ||| ||||||
Sbjct: 5392 acttggagcggatcaggtagttgacctgcgtaaggaggg-cctctatggagaggggtggc 5334
Query: 585 aagtaagacagggtctcgaacttcttgatgccctcgat 622
||||||||||||||||| |||||||| |||||||||||
Sbjct: 5333 aagtaagacagggtctcaaacttcttcatgccctcgat 5296
Score = 281 bits (142), Expect = 1e-72
Identities = 299/349 (85%), Gaps = 3/349 (0%)
Strand = Plus / Minus
Query: 286 gaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggac 345
||||| ||||||||||||||||| |||||| |||| ||||||||| |||||||||| |||
Sbjct: 4288 gaaggtgatgaagctgacgcactacacctggcgcaggttgtcgaagccgatgatgcagac 4229
Query: 346 atacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtc 405
||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 4228 ataggcgtcagggtactccttcttgacctcctccacctccttgagcaccttcttggtgtc 4169
Query: 406 ggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagg 465
|||||| || || ||||| |||||||||||||| |||| || || |||||||||||
Sbjct: 4168 ggtgcacccaaagataggtagcttccacattgtttagtattagcggtcatagtacccagg 4109
Query: 466 agatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcaccca 525
|| ||| |||||||||| ||||| |||| || |||||||||||||| ||||| ||
Sbjct: 4108 ggacctattgcgctcacggaatatgaagccaatgttactgaactcgaggcagggcactca 4049
Query: 526 cttggagcggatcaggtagtcgacctgcttaaggagggccctccgtgctgagtggtggca 585
||||||| |||||||||||||||||||||| ||||||| ||||| || ||| | |||||
Sbjct: 4048 cttggaggggatcaggtagtcgacctgcttgaggaggg-cctccatggagagggatggca 3990
Query: 586 agtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
||| |||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 3989 agt--gacaggatctcgaacttcttgatgccctcgatcggccaaacctg 3943
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 771 acctgcatgcacctgatccttccgccattgctga 738
>dbj| AB020955.1 | Triticum timopheevii subsp. armeniacum DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Ara-B
Length = 787
Score = 502 bits (253), Expect = e-139
Identities = 341/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 488 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 429
Query: 626 ccacacctg 634
|||||||||
Sbjct: 428 ccacacctg 420
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020952.1 | Aegilops searsii DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sea-B
Length = 728
Score = 502 bits (253), Expect = e-139
Identities = 341/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcgaagccgatgacgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 609
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 608 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 549
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || || ||||| ||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 548 cgaccgtcatagtaaccaggggagctgttgtgctcacggaagacgaagccaaccttgctg 489
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 488 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 430
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| |||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct: 429 ctccgtggagaggggtggcaagtaagatagggtctcgaacttcttgatgccctcaattgg 370
Query: 626 ccacacctg 634
|||||||||
Sbjct: 369 ccacacctg 361
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020943.1 | Hordeum vulgare DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Hor-A
Length = 605
Score = 502 bits (253), Expect = e-139
Identities = 341/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcaacctgcttcaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020938.1 | Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Squ-A
Length = 607
Score = 502 bits (253), Expect = e-139
Identities = 341/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 488
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 487 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 428
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 427 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 368
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 367 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 309
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 308 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 249
Query: 626 ccacacctg 634
|||||||||
Sbjct: 248 ccacacctg 240
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020960.1 | Bromus catharticus DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bro-B
Length = 784
Score = 502 bits (253), Expect = e-139
Identities = 341/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 724 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttgacctcctccagctcc 665
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 664 ttgatcacctgtgaggcatcggtgcatccgaacataggcaacttccacattgtccagtaa 605
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 604 cggccatcgtagtatccaggagatgcattgtgctcacggaagacgaagccaaccttgctg 545
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||| |
Sbjct: 544 aactcgaggcacggcacccacttggagcggatcaagtagtcgatctgcttcaggaggg-c 486
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 485 ctcggtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 426
Query: 626 ccacacctg 634
|||||||||
Sbjct: 425 ccacacctg 417
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| ||| ||||||
Sbjct: 132 acctgcatgcacctgatccttccgccgctgctga 99
>dbj| AB020959.1 | Secale cereale DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sec-B
Length = 789
Score = 494 bits (249), Expect = e-136
Identities = 331/357 (92%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 278 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 337
|||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 777 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 718
Query: 338 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 397
| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 717 acgcggacataggcgtcagggtactccttcttgacctcctccacctcattgagcacctga 658
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
|||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 657 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgaccgtcgtag 598
Query: 458 tacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaa 517
||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 597 tacccgggagagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcag 538
Query: 518 ggcacccacttggagcggatcaggtagtcgacctgcttaaggagggccctccgtgctgag 577
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 537 ggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-cctccgtggagag 479
Query: 578 tggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 478 gggtggcaagtaagacagggtctcgaacttcttgatgccctcaattggccacacctg 422
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020954.1 | Triticum urartu DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Ura-B
Length = 787
Score = 494 bits (249), Expect = e-136
Identities = 340/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || || |||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgtagtgctcacggaagacgaagccaaccttgctg 548
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 488 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 429
Query: 626 ccacacctg 634
|||||||||
Sbjct: 428 ccacacctg 420
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020950.1 | Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sha-B
Length = 792
Score = 494 bits (249), Expect = e-136
Identities = 340/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 552 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 494
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 493 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 434
Query: 626 ccacacctg 634
|||||||||
Sbjct: 433 ccacacctg 425
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||| ||||||||||||| || |||||||
Sbjct: 135 acctgcatgtacctgatccttccgccattgctga 102
>dbj| AB020949.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-B
Length = 792
Score = 494 bits (249), Expect = e-136
Identities = 340/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 552 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 494
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 493 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 434
Query: 626 ccacacctg 634
|||||||||
Sbjct: 433 ccacacctg 425
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020937.1 | Aegilops searsii DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sea-A
Length = 611
Score = 494 bits (249), Expect = e-136
Identities = 340/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 551 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 492
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 491 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 432
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 431 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 372
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 371 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 313
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 312 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 253
Query: 626 ccacacctg 634
|||||||||
Sbjct: 252 ccacacctg 244
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020930.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A2
Length = 604
Score = 494 bits (249), Expect = e-136
Identities = 340/369 (92%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB042068.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p13-1
Length = 985
Score = 494 bits (249), Expect = e-136
Identities = 349/381 (91%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
|||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| || | ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 862
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 861 tcctccacctcgttgagcacctgtgtagcgtcggtgcacccgaacataggcagcttccac 802
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
||||||||||| || |||||||||||||| || || ||||||||||||||| | |||
Sbjct: 801 attgtccagtatcgaccatcgtagtacccgggggagctgttgtgctcacggaaaacgaag 742
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 741 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgacctgc 682
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| ||||||| |||||||| ||| ||||||||||||||||| |||||||||||||||||
Sbjct: 681 ttcaggaggg-cctccgtggagaggggtggcaagtaagacagagtctcgaacttcttgat 623
Query: 614 gccctcgatgggccacacctg 634
|||||| || |||||||||||
Sbjct: 622 gccctcaatcggccacacctg 602
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| ||||||||||
Sbjct: 149 acctgcatgcacctgatccttccgccgttgctga 116
>dbj| AB020946.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe1-B
Length = 787
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 668
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ctgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 547 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 489
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 488 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 429
Query: 626 ccacacctg 634
|||||||||
Sbjct: 428 ccacacctg 420
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020936.1 | Aegilops bicornis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bic-A
Length = 605
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataagcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020931.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A3
Length = 604
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||| || ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020929.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A1
Length = 604
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagagtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020927.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe1-A1
Length = 604
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020926.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds
Length = 604
Score = 486 bits (245), Expect = e-134
Identities = 339/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020948.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-B
Length = 772
Score = 484 bits (244), Expect = e-133
Identities = 338/368 (91%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 653
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 652 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 593
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 592 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 533
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 532 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 474
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 473 ctccgtggataggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 414
Query: 626 ccacacct 633
||||||||
Sbjct: 413 ccacacct 406
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020939.1 | Triticum timopheevii subsp. armeniacum DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Ara-A
Length = 604
Score = 478 bits (241), Expect = e-131
Identities = 341/373 (91%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacatagtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| |||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctgcatg 638
|||||||||||||
Sbjct: 245 ccacacctgcatg 233
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020935.1 | Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sha-A
Length = 605
Score = 478 bits (241), Expect = e-131
Identities = 338/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaagtagtcgacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| |||||||||||||||||||||||||| |||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaatttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020928.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe2-A
Length = 604
Score = 478 bits (241), Expect = e-131
Identities = 338/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| |||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcaaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 484 ttgagcacctgtgtggcgtcggtgcacccgaacatagggagcttccacattgtccagtat 425
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |
Sbjct: 364 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgcttcaggaggg-c 306
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 305 ctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 246
Query: 626 ccacacctg 634
|||||||||
Sbjct: 245 ccacacctg 237
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB042067.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p10-1
Length = 629
Score = 478 bits (241), Expect = e-131
Identities = 347/381 (91%), Gaps = 1/381 (0%)
Strand = Plus / Minus
Query: 254 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 313
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566
Query: 314 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 373
|| |||| ||||||||| ||| ||| |||||||| || |||||||||||||||||||||
Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttcttgacc 506
Query: 374 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 433
|||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 505 tcctccacctcgttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccac 446
Query: 434 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 493
||||||||||| || || ||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 445 attgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaag 386
Query: 494 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgc 553
||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtctacctgc 326
Query: 554 ttaaggagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgat 613
|| ||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaggaggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgat 267
Query: 614 gccctcgatgggccacacctg 634
||||| || |||||||||||
Sbjct: 266 accctcaatcggccacacctg 246
Score = 46.1 bits (23), Expect = 0.15
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttcc 652
|||||||||||||||||||||||
Sbjct: 143 acctgcatgcacctgatccttcc 121
>dbj| AB020958.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-B2
Length = 781
Score = 470 bits (237), Expect = e-129
Identities = 337/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 662
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccaaacatgggcagcttccacattgtccagtat 602
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 542
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 541 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 483
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| |||||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 482 ttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctcaattgg 423
Query: 626 ccacacctg 634
|||||||||
Sbjct: 422 ccacacctg 414
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttcccccattgctga 102
>dbj| AB020953.1 | Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Squ-B
Length = 781
Score = 470 bits (237), Expect = e-129
Identities = 337/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 662
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccgaacatgggcagcttccacattgtccagtat 602
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| || || |||||||||
Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgatgcctaccttgctg 542
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 541 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-c 483
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| |||||||||||||||| |||||||||||||||||||||||| || ||
Sbjct: 482 ttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctcaattgg 423
Query: 626 ccacacctg 634
|||||||||
Sbjct: 422 ccacacctg 414
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020951.1 | Aegilops bicornis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bic-B
Length = 783
Score = 470 bits (237), Expect = e-129
Identities = 328/357 (91%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 278 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 337
|||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 776 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 717
Query: 338 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 397
| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 716 acacggacataggcgtcagggtactccttcttgacctcctccacctcattgagcacctgt 657
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
|||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 656 gtggcgtcggtgcaaccgaacataggcagcttccacattgtccagtatcgactatcgtag 597
Query: 458 tacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaa 517
||||| || || ||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 596 tacccgggggagctgttgtgctcacggaagacgaagccaaccttgctaaactcgaggcag 537
Query: 518 ggcacccacttggagcggatcaggtagtcgacctgcttaaggagggccctccgtgctgag 577
|||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||
Sbjct: 536 ggcacccacttggagcggatcaggtagtcgacctgcttcaggaggg-cttccgtggagag 478
Query: 578 tggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 477 gggtggcaagtaagacagggtctcgaacttcttgatgccctcaattggccacacctg 421
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020934.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A3
Length = 605
Score = 470 bits (237), Expect = e-129
Identities = 337/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020933.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A2
Length = 605
Score = 470 bits (237), Expect = e-129
Identities = 337/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020932.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A1
Length = 605
Score = 470 bits (237), Expect = e-129
Identities = 337/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtcgacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>gb| AF192776.1 |AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 466 bits (235), Expect = e-128
Identities = 361/399 (90%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>dbj| AB020941.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-A
Length = 605
Score = 462 bits (233), Expect = e-127
Identities = 336/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtctacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020940.1 | Triticum turgidum subsp. dicoccoides DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Dic-A
Length = 605
Score = 462 bits (233), Expect = e-127
Identities = 336/369 (91%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
|| || ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaggtagtctacctgctttaggaggg-c 307
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 306 ctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 247
Query: 626 ccacacctg 634
|||||||||
Sbjct: 246 ccacacctg 238
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>gb| AF192779.1 |AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 460 bits (232), Expect = e-126
Identities = 358/396 (90%), Gaps = 3/396 (0%)
Strand = Plus / Minus
Query: 269 tcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcg 328
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcg 435
Query: 329 aatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttg 388
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 434 aagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctccttg 375
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |
Sbjct: 374 atcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtacctg 315
Query: 449 ccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgctgaa 507
|| |||||||| || |||| ||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 314 ccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgctgaa 256
Query: 508 ctcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggccct 567
||| ||||| || ||||||||||||||||||| | |||||| |||||| ||||||| |||
Sbjct: 255 ctccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg-cct 197
Query: 568 ccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggcc 627
|| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct: 196 cctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcggcc 137
Query: 628 acacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||| | ||| ||||||||||||||||
Sbjct: 136 acacctgcatgcatcggattcttccaccgttgctga 101
>gb| AF192773.1 |AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 458 bits (231), Expect = e-125
Identities = 360/399 (90%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | || ||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtactcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>gb| AF104250.1 |AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 458 bits (231), Expect = e-125
Identities = 360/399 (90%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||||||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaattg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 139 gccacacctgcatgcacctgatccttccgccgttgctga 101
>gb| AF096617.1 |AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
carboxylase small subunit (rbcS) mRNA, partial cds
Length = 504
Score = 458 bits (231), Expect = e-125
Identities = 360/399 (90%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||| | ||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 377 ttgatcacctgggaggcgtcggtgcatccgaacatggggagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| || ||||| ||||||| ||| | |||||| ||||||||||| ||| | | |||
Sbjct: 317 ctgccgtcatagtatccaggag-tgctgccgtgctcgcggaagatgaagccaccttggct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
||||||||||||||| ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgtgagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatag 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>dbj| AB020942.1 | Secale cereale DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sec-A
Length = 591
Score = 454 bits (229), Expect = e-124
Identities = 335/369 (90%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 531 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 472
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 471 ttgagcacctgagtggcgtccgtgcagccgaacataggcagcttccacattgtccagtac 412
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| |||||||| || || || ||||||||| ||||||| ||| ||||||||||||
Sbjct: 411 cggccgtcgtagtaaccgggggagctgttgtgctcgcggaagacgaagccaaccttgctg 352
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 351 aactcgaggcagggtacccacttggagcggatcaggtagtcgacctgcttcaagaggg-c 293
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
|||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 292 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcgg 233
Query: 626 ccacacctg 634
|||||||||
Sbjct: 232 ccacacctg 224
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>gb| AF192775.1 |AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 452 bits (228), Expect = e-124
Identities = 361/401 (90%), Gaps = 7/401 (1%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| ||||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggagggc 199
Query: 565 --cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 198 ctcctccg---agagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaat 142
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 cggccacacctgcatgcacctgatccttccgccgttgctga 101
>gb| AF192774.1 |AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 452 bits (228), Expect = e-124
Identities = 361/401 (90%), Gaps = 7/401 (1%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| ||||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggagggc 199
Query: 565 --cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 198 ctcctccg---agagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaat 142
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 cggccacacctgcatgcacctgatccttccgccgttgctga 101
>gb| AF192780.1 |AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 450 bits (227), Expect = e-123
Identities = 359/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ctgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||||||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaattg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 139 gccacacctgcatgcacctgatccttccgccgttgctga 101
>gb| AF104249.1 |AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 450 bits (227), Expect = e-123
Identities = 359/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcaacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
||||||||||||||| ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcaaggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||| |||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggcggcaggtaagacagggtctcgaacttcttgatgccctcaatag 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>dbj| AB020947.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe2-B
Length = 738
Score = 450 bits (227), Expect = e-123
Identities = 309/335 (92%), Gaps = 1/335 (0%)
Strand = Plus / Minus
Query: 300 tgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggt 359
|||||||||||||||| |||| |||||| || ||||||| |||||||| ||||||||||
Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679
Query: 360 actccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaaca 419
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 678 actccttcttgacctcctccacctcgctgagcacctgtgtggcgtcggtgcacccgaaca 619
Query: 420 taggcagcttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgct 479
||||||||||||||||||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 618 taggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgct 559
Query: 480 cacggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatca 539
||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 558 cacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatca 499
Query: 540 ggtagtcgacctgcttaaggagggccctccgtgctgagtggtggcaagtaagacagggtc 599
|||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 498 ggtagtcgacctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtc 440
Query: 600 tcgaacttcttgatgccctcgatgggccacacctg 634
|||||||||||||||||||| || |||||||||||
Sbjct: 439 tcgaacttcttgatgccctcaatcggccacacctg 405
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>gb| K02324.1 |WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
small subunit mRNA, clone pTS406, 3' end
Length = 317
Score = 446 bits (225), Expect = e-122
Identities = 277/293 (94%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 25 atagtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcatt 84
|||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 293 atagtcgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcatt 234
Query: 85 cacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattt 144
||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 233 cacatacgagcatgctttctcgagccatgttcgtacatgaacatggacatacacatattc 174
Query: 145 ttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgac 203
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgac 114
Query: 204 aaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccgg 263
||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||
Sbjct: 113 aaaactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgccgg 54
Query: 264 actcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctga 316
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 53 actcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctga 1
>gb| AF097360.1 |AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 444 bits (224), Expect = e-121
Identities = 360/401 (89%), Gaps = 7/401 (1%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacgtcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| ||||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggagggc 199
Query: 565 --cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
|||||| |||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 198 ctcctccg---agagtggtggcaagtaagaaagggtctcgaacttcttgatgccctcaat 142
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 cggccacacctgcatgcacctgatccttccgccgttgctga 101
>dbj| AB020957.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-B1
Length = 787
Score = 444 bits (224), Expect = e-121
Identities = 333/368 (90%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 atcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |
Sbjct: 547 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgtttcaggaggg-c 489
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| || ||||||| ||||||||||||||||||||||||||||||||| || ||
Sbjct: 488 ctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 429
Query: 626 ccacacct 633
||||||||
Sbjct: 428 ccacacct 421
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>dbj| AB020956.1 | Triticum turgidum subsp. dicoccoides DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Dic-B
Length = 787
Score = 444 bits (224), Expect = e-121
Identities = 333/368 (90%), Gaps = 1/368 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||| || |||||| | |||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 446 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 505
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 506 aactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |
Sbjct: 547 aactcgaggcagggcacccactttgagcggatcaggtagtcgacctgtttcaggaggg-c 489
Query: 566 ctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatggg 625
||||||| || ||||||| ||||||||||||||||||||||||||||||||| || ||
Sbjct: 488 ctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctcaattgg 429
Query: 626 ccacacct 633
||||||||
Sbjct: 428 ccacacct 421
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| || |||||||
Sbjct: 135 acctgcatgcacctgatccttccgccattgctga 102
>gb| AF192778.1 |AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
carboxylase small subunit (rbcS) mRNA, nuclear gene
encoding chloroplast protein, partial cds
Length = 504
Score = 442 bits (223), Expect = e-121
Identities = 358/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactctttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| || ||||| ||||||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcatagtatccaggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||||||||| |||||||||||||||||| |||||||||||||| || |
Sbjct: 199 cctcctctgtgagtggtggcaggtaagacagggtctcgaatttcttgatgccctcaatag 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>gb| AF097359.1 |AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 442 bits (223), Expect = e-121
Identities = 358/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | | |||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaattcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| | ||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatcggattcttccaccgttgctga 101
>gb| AF192777.1 |AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 434 bits (219), Expect = e-118
Identities = 357/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctctacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||| | ||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgcgaggcatcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || || | ||| | |||||| ||||||||||| || ||||||||
Sbjct: 317 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagcccaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||| ||||||||||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatcg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gccacacctgcatgcacctgatccttccaccgttgctga 101
>gb| AF097361.1 |AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 434 bits (219), Expect = e-118
Identities = 357/399 (89%), Gaps = 3/399 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 200
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||| |||||| |||||||||||||||||||||||||| || |
Sbjct: 199 cctcctctgagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctcaatcg 140
Query: 625 gccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||| ||||| ||||||||||||||||
Sbjct: 139 gccacacctgcatgcatctgattcttccaccgttgctga 101
>gb| AF202646.1 |AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 586
Score = 418 bits (211), Expect = e-113
Identities = 337/375 (89%), Gaps = 3/375 (0%)
Strand = Plus / Minus
Query: 260 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 319
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526
Query: 320 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 379
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctcc 466
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
||||| |||| |||||||| |||||||||||| |||||||| |||| |||||||||||||
Sbjct: 465 acctccttgatcacctgtgaggcgtcggtgcacccgaacatgggcaacttccacattgtc 406
Query: 440 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 498
||||||| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||
Sbjct: 405 cagtacctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaac 347
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
|||||||||||| ||||| || ||||||||||||||||||| | |||||| |||||| ||
Sbjct: 346 cttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgctttag 287
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 286 gaggg-cctcctctgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccct 228
Query: 619 cgatgggccacacct 633
| || ||||||||||
Sbjct: 227 caatcggccacacct 213
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||||||||||||||||||||
Sbjct: 134 acctgcatgcatctgatccttccaccgttgctga 101
>gb| AF202648.1 |AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) gene, partial cds
Length = 620
Score = 404 bits (204), Expect = e-109
Identities = 336/376 (89%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 260 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 319
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560
Query: 320 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 379
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 500
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
||||| |||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 499 acctccttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtc 440
Query: 440 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 498
||||||| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||
Sbjct: 439 cagtacctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaac 381
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
|||||||||||||||||| || ||||||||||||||||||| | |||||| |||||| ||
Sbjct: 380 cttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgcttcag 321
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 320 gaggg-cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccct 262
Query: 619 cgatgggccacacctg 634
| || |||||||||||
Sbjct: 261 caattggccacacctg 246
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| ||||||||||
Sbjct: 134 acctgcatgcacctgatccttccgccgttgctga 101
>gb| AF202645.1 |AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 600
Score = 400 bits (202), Expect = e-108
Identities = 331/370 (89%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 474
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 473 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 414
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||||||||
Sbjct: 413 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaaccttgct 355
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||||||||| || ||||||||||||||||||| | |||||| ||| || |||||||
Sbjct: 354 gaactcgaggcagggaacccacttggagcggatcaagaagtcgatctgtttcaggaggg- 296
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| | ||||||||||| |||||| |||||||||||||||||||||||||| | |
Sbjct: 295 cctcctcggagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctcagtcg 236
Query: 625 gccacacctg 634
||||||||||
Sbjct: 235 gccacacctg 226
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||| ||||||||||||||||
Sbjct: 134 acctgcatgcatctgattcttccaccgttgctga 101
>gb| AF200303.1 |AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) gene, nuclear gene encoding chloroplast protein,
partial cds
Length = 594
Score = 400 bits (202), Expect = e-108
Identities = 331/370 (89%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 468
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||||| |||||| ||||| |||||||| |||| |||||||||||||||||||
Sbjct: 467 ttgatgacctgtgaggcgtctgtgcagccgaacatgggcaacttccacattgtccagtac 408
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || || | ||| | |||| | ||||||||||| |||||||||||
Sbjct: 407 ctgccgtcgtagtatcc-gggggtgctgccgtgcacgcggaagatgaagccaaccttgct 349
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 348 gaactcaaggcagggaacccacttggagcggatcaagaagtcgatctgcttcaggaggg- 290
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| ||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 289 cctcctcagagagtggtggcaagtaagacagggtctcgaacttcttgatgccctcaattg 230
Query: 625 gccacacctg 634
||||||||||
Sbjct: 229 gccacacctg 220
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||||||||||| ||||||||||
Sbjct: 134 acctgcatgcacctgatccttccgccgttgctga 101
>dbj| AB020945.1 | Avena sativa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Ave-A
Length = 590
Score = 400 bits (202), Expect = e-108
Identities = 331/370 (89%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 266 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531
Query: 326 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 385
||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttcacctcctccacctcc 471
Query: 386 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 445
|||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 470 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 411
Query: 446 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 504
| ||| |||||||| || |||| ||| | |||||||||||||||||| || ||||||||
Sbjct: 410 ctgccgtcgtagtatccgggag-tgctgccgtgctcacggaagatgaagcccaccttgct 352
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagggc 564
|||||| ||||| || ||||||||||||||||||||| |||||| |||||| | |||||
Sbjct: 351 gaactccaggcagggaacccacttggagcggatcaggaagtcgatctgcttcaagaggg- 293
Query: 565 cctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgg 624
||||| |||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 292 cctcctctgacagtggtggcagataagacagggtctcgaacttcttgatgccctcaatcg 233
Query: 625 gccacacctg 634
||||||||||
Sbjct: 232 gccacacctg 223
Score = 60.0 bits (30), Expect = 1e-05
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||||||||||||||||||||
Sbjct: 135 acctgcatgcatctgatccttccaccgttgctga 102
>gb| AF202647.1 |AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 593
Score = 396 bits (200), Expect = e-107
Identities = 335/376 (89%), Gaps = 3/376 (0%)
Strand = Plus / Minus
Query: 260 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 319
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533
Query: 320 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 379
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 473
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
||||| |||| |||||||| ||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 472 acctccttgatcacctgtgaggcatcagtgcagccgaacatgggcagcttccacattgtc 413
Query: 440 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 498
||||||| |||||||||||| || |||| ||| | |||||| ||||||||||| |||||
Sbjct: 412 cagtacctgccatcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaac 354
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
|||||||||||||||||| || ||||||||||||||||||| | |||| | |||||| ||
Sbjct: 353 cttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcaatctgcttcag 294
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 293 gaggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccct 235
Query: 619 cgatgggccacacctg 634
| || ||||| |||||
Sbjct: 234 caatcggccatacctg 219
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||| ||||||||||||||||
Sbjct: 134 acctgcatgcatctgattcttccaccgttgctga 101
>dbj| AK121444.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full
insert sequence
Length = 984
Score = 327 bits (165), Expect = 3e-86
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 666
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 665 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 606
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 605 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 546
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 545 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 486
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 485 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 427
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 426 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 367
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 366 cggccacacctgcatgcacctgatcctgccgccattgctga 326
>dbj| AK119219.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full
insert sequence
Length = 828
Score = 327 bits (165), Expect = 3e-86
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 512
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 511 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 452
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 451 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 392
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 391 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 332
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 331 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 273
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 272 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 213
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 212 cggccacacctgcatgcacctgatcctgccgccattgctga 172
>dbj| AK070556.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full
insert sequence
Length = 2409
Score = 327 bits (165), Expect = 3e-86
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 513
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 512 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 453
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 452 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 393
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 392 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 333
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 332 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 274
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 273 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 214
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 213 cggccacacctgcatgcacctgatcctgccgccattgctga 173
>dbj| AK061611.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full
insert sequence
Length = 830
Score = 327 bits (165), Expect = 3e-86
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 515
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 514 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 455
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 454 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 395
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 394 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 335
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 334 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 276
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 275 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 216
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 215 cggccacacctgcatgcacctgatcctgccgccattgctga 175
>dbj| D00643.1 |RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
of ribulose-1,5-bisphosphate carboxylase, complete cds,
clone pOSSS1139
Length = 830
Score = 327 bits (165), Expect = 3e-86
Identities = 343/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 510
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 509 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 450
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 449 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 390
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 389 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 330
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 329 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 271
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 270 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 211
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 210 cggccacacctgcatgcacctgatcctgccgccattgctga 170
>gb| L22155.1 |RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate
carboxylase/oxygenase (rbcS) mRNA, complete cds
Length = 808
Score = 319 bits (161), Expect = 7e-84
Identities = 342/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctaacg 490
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 489 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 430
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 429 tccttgagcacctgggtggcgtcggtgcacccgaacatgggcagcttccacatggtccag 370
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||| |||||||| ||||| || || || ||||||| ||| || || ||||||
Sbjct: 369 tacctgccgtcgtagtatccaggggacttgtggttctcacggtagacaaatccgaccttg 310
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 309 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 251
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 250 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 191
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 190 cggccacacctgcatgcacctgatcctgccgccattgctga 150
>gb| AF017364.1 |AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 854
Score = 311 bits (157), Expect = 2e-81
Identities = 341/401 (85%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||| |||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 538
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 537 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 478
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 477 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 418
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| || || ||||||
Sbjct: 417 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacaaatccgaccttg 358
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| ||||| |||| |||||| |||| |
Sbjct: 357 ctgaactcgaggcagggcacccacttggaacggaggaggtactcgatctgcttcagga-g 299
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct: 298 gtcctccacggtgagcggtggcaggtaagagagggtctcgaacttcttgatgccctcaat 239
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 238 cggccacacctgcatgcacctgatcctgccgccattgctga 198
>gb| AY445627.1 | Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit mRNA, complete cds;
chloroplast
Length = 860
Score = 303 bits (153), Expect = 4e-79
Identities = 340/401 (84%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 507
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 506 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 447
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 446 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 387
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 386 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 327
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 326 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 268
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 267 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 208
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||| |||||||||| || |||||||
Sbjct: 207 tggccacacctgcatgcacttgatccttccgccattgctga 167
>dbj| AK068555.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full
insert sequence
Length = 899
Score = 303 bits (153), Expect = 4e-79
Identities = 340/401 (84%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 524
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 523 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 464
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 463 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 404
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 403 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 344
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 343 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 285
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 284 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 225
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||| |||||||||| || |||||||
Sbjct: 224 tggccacacctgcatgcacttgatccttccgccattgctga 184
>gb| AF052305.1 |AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 835
Score = 303 bits (153), Expect = 4e-79
Identities = 340/401 (84%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| |||||||||| |||| | ||||||||| | | |
Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgcctgacg 501
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||| | |||||||| ||||||| | |
Sbjct: 500 ttgtcgaagccgatgatacggacgaatgcatcagggttcgccttcttggcctcctcgagc 441
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 440 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 381
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||| || || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 380 tacctgccatcgtaatatccgggggatctgtggttctcacggtagacgaatccgaccttg 321
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 320 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 262
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 261 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 202
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||||||||| || || |||||||
Sbjct: 201 cggccacacctgcatgcacctgatcctgccgccattgctga 161
>dbj| AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 291 bits (147), Expect = 1e-75
Identities = 316/371 (85%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079842
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 10079843 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079902
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 10079903 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079962
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 10079963 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10080022
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 10080023 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 10080081
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 10080082 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 10080141
Query: 623 gggccacacct 633
||||||||||
Sbjct: 10080142 cggccacacct 10080152
Score = 270 bits (136), Expect = 5e-69
Identities = 314/372 (84%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11262239
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 11262238 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11262179
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 11262178 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11262119
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 11262118 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11262059
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 11262058 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 11262000
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 11261999 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 11261940
Query: 623 gggccacacctg 634
|||||||||||
Sbjct: 11261939 tggccacacctg 11261928
Score = 248 bits (125), Expect = 2e-62
Identities = 315/377 (83%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 259 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 318
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276906
Query: 319 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 378
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 11276905 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276846
Query: 379 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 438
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 11276845 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276786
Query: 439 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 498
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 11276785 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276726
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
||| || |||||||||||||||||||| ||||| |||| |||||| |||| |||||| |
Sbjct: 11276725 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 11276666
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
|| || |||| |||| ||||||| ||| ||||||||||| |||||||||||||| |
Sbjct: 11276665 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 11276607
Query: 619 cgatgggccacacctgc 635
| || ||||||||||||
Sbjct: 11276606 caatcggccacacctgc 11276590
Score = 129 bits (65), Expect = 1e-26
Identities = 236/293 (80%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11320049
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 11320048 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319989
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 11319988 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319929
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 11319928 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319869
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
|||||||| | ||||||||||||||| || |||| |||||| |||| ||||||
Sbjct: 11319868 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 11319816
Score = 75.8 bits (38), Expect = 2e-10
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 363 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 422
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 11266809 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 11266750
Query: 423 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 468
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 11266749 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 11266704
Score = 65.9 bits (33), Expect = 2e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
|||||||| ||||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 11319790 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 11319738
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||| || ||||||||||||||||||||||
Sbjct: 11276478 acctgcatacagctgatccttccaccgttgctga 11276445
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||||||||| || |||||||
Sbjct: 11319639 acctgcatgcatctgatccttccgccattgctga 11319606
Score = 44.1 bits (22), Expect = 0.58
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttg 659
|||||||||||| |||||||||| ||||||
Sbjct: 11264859 acctgcatgcacttgatccttccgccgttg 11264830
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||| |||||||||| || |||||||
Sbjct: 11261821 acctgcatgcacttgatccttccgccattgctga 11261788
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||| || || |||||||
Sbjct: 10080252 acctgcatgcacctgatcctgccgccattgctga 10080285
>gb| DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 291 bits (147), Expect = 1e-75
Identities = 316/371 (85%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079727
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 10079728 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079787
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 10079788 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079847
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 10079848 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10079907
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 10079908 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 10079966
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 10079967 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 10080026
Query: 623 gggccacacct 633
||||||||||
Sbjct: 10080027 cggccacacct 10080037
Score = 270 bits (136), Expect = 5e-69
Identities = 314/372 (84%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11261910
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 11261909 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11261850
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 11261849 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11261790
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 11261789 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11261730
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 11261729 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 11261671
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 11261670 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 11261611
Query: 623 gggccacacctg 634
|||||||||||
Sbjct: 11261610 tggccacacctg 11261599
Score = 248 bits (125), Expect = 2e-62
Identities = 315/377 (83%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 259 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 318
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276577
Query: 319 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 378
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 11276576 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276517
Query: 379 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 438
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 11276516 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276457
Query: 439 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 498
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 11276456 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276397
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
||| || |||||||||||||||||||| ||||| |||| |||||| |||| |||||| |
Sbjct: 11276396 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 11276337
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
|| || |||| |||| ||||||| ||| ||||||||||| |||||||||||||| |
Sbjct: 11276336 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 11276278
Query: 619 cgatgggccacacctgc 635
| || ||||||||||||
Sbjct: 11276277 caatcggccacacctgc 11276261
Score = 129 bits (65), Expect = 1e-26
Identities = 236/293 (80%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11319720
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 11319719 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319660
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 11319659 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319600
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 11319599 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319540
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
|||||||| | ||||||||||||||| || |||| |||||| |||| ||||||
Sbjct: 11319539 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 11319487
Score = 75.8 bits (38), Expect = 2e-10
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 363 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 422
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 11266480 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 11266421
Query: 423 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 468
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 11266420 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 11266375
Score = 65.9 bits (33), Expect = 2e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
|||||||| ||||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 11319461 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 11319409
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||| || ||||||||||||||||||||||
Sbjct: 11276149 acctgcatacagctgatccttccaccgttgctga 11276116
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||||||||| || |||||||
Sbjct: 11319310 acctgcatgcatctgatccttccgccattgctga 11319277
Score = 44.1 bits (22), Expect = 0.58
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttg 659
|||||||||||| |||||||||| ||||||
Sbjct: 11264530 acctgcatgcacttgatccttccgccgttg 11264501
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||| |||||||||| || |||||||
Sbjct: 11261492 acctgcatgcacttgatccttccgccattgctga 11261459
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||| || || |||||||
Sbjct: 10080137 acctgcatgcacctgatcctgccgccattgctga 10080170
>emb| AL731739.4 |CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 145890
Score = 291 bits (147), Expect = 1e-75
Identities = 316/371 (85%), Gaps = 1/371 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 82779
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 82778 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 82719
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 82718 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 82659
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 82658 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 82599
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
|||||||||||||| |||||||||||||| |||| |||||| |||| |||||| |||| |
Sbjct: 82598 ctgaactcgaggcagggcacccacttggaacggagcaggtactcgatctgcttcagga-g 82540
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
| ||||| | |||| ||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 82539 gtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaat 82480
Query: 623 gggccacacct 633
||||||||||
Sbjct: 82479 cggccacacct 82469
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||| || || |||||||
Sbjct: 82369 acctgcatgcacctgatcctgccgccattgctga 82336
>dbj| AK099574.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full
insert sequence
Length = 947
Score = 287 bits (145), Expect = 2e-74
Identities = 341/405 (84%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 259 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 318
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 528
Query: 319 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 378
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 527 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 468
Query: 379 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 438
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 467 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 408
Query: 439 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 498
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 407 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 348
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
||| || |||||||||||||||||||| ||||| |||| |||||| |||| |||||| |
Sbjct: 347 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 288
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
|| || |||| |||| ||||||| ||| ||||||||||| |||||||||||||| |
Sbjct: 287 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 229
Query: 619 cgatgggccacacctgcatgcacctgatccttccaccgttgctga 663
| || |||||||||||||| || ||||||||||||||||||||||
Sbjct: 228 caatcggccacacctgcatacagctgatccttccaccgttgctga 184
>dbj| D00644.1 |RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
of ribulose-1,5-bisphosphate carboxylase, complete cds,
clone pOSSS2106
Length = 895
Score = 280 bits (141), Expect = 6e-72
Identities = 337/401 (84%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 522
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||| | | || || ||||| |||||||| ||||||| | |
Sbjct: 521 ttgtcgaagccgatgatacggataaaggcatcggggtaggccttcttggcctcctcgagc 462
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 461 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 402
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||| ||| ||| ||| |||||||||
Sbjct: 401 tacctgccatcgtagtacccgggagacctgtggttctcgcggtagacgaatccaaccttg 342
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 341 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 283
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 282 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 223
Query: 623 gggccacacctgcatgcacctgatccttccaccgttgctga 663
||||||||||||||| || |||||||||| || |||||||
Sbjct: 222 tggccacacctgcatgaacttgatccttccgccattgctga 182
>emb| BX119951.3 |CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 127267
Score = 270 bits (136), Expect = 5e-69
Identities = 314/372 (84%), Gaps = 1/372 (0%)
Strand = Plus / Plus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 109815
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 109816 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 109875
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 109876 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 109935
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 109936 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 109995
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggagg 562
||||||||||||||||||||||||||||| || | |||||| |||| |||||| | | |
Sbjct: 109996 ctgaactcgaggcaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaag 110054
Query: 563 gccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgat 622
||||| | |||||||||||| ||| || |||||||||||||||||||||||||| ||
Sbjct: 110055 atcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaat 110114
Query: 623 gggccacacctg 634
|||||||||||
Sbjct: 110115 tggccacacctg 110126
Score = 248 bits (125), Expect = 2e-62
Identities = 315/377 (83%), Gaps = 1/377 (0%)
Strand = Plus / Plus
Query: 259 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 318
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 95148
Query: 319 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 378
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 95149 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 95208
Query: 379 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 438
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 95209 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 95268
Query: 439 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 498
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 95269 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 95328
Query: 499 cttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaag 558
||| || |||||||||||||||||||| ||||| |||| |||||| |||| |||||| |
Sbjct: 95329 cttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatctgcttcaa 95388
Query: 559 gagggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccct 618
|| || |||| |||| ||||||| ||| ||||||||||| |||||||||||||| |
Sbjct: 95389 ga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgatgcctt 95447
Query: 619 cgatgggccacacctgc 635
| || ||||||||||||
Sbjct: 95448 caatcggccacacctgc 95464
Score = 129 bits (65), Expect = 1e-26
Identities = 236/293 (80%)
Strand = Plus / Plus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 52005
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 52006 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 52065
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 52066 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 52125
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 52126 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 52185
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
|||||||| | ||||||||||||||| || |||| |||||| |||| ||||||
Sbjct: 52186 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 52238
Score = 75.8 bits (38), Expect = 2e-10
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 363 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 422
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 105245 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 105304
Query: 423 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 468
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 105305 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 105350
Score = 65.9 bits (33), Expect = 2e-07
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctg 634
|||||||| ||||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 52264 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 52316
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||| || ||||||||||||||||||||||
Sbjct: 95576 acctgcatacagctgatccttccaccgttgctga 95609
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||| |||||||||| || |||||||
Sbjct: 110233 acctgcatgcacttgatccttccgccattgctga 110266
Score = 44.1 bits (22), Expect = 0.58
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttg 659
|||||||||||| |||||||||| ||||||
Sbjct: 107195 acctgcatgcacttgatccttccgccgttg 107224
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||| ||||||||||| || |||||||
Sbjct: 52415 acctgcatgcatctgatccttccgccattgctga 52448
>gb| AF017363.1 |AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 918
Score = 250 bits (126), Expect = 5e-63
Identities = 289/342 (84%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 322 gttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccac 381
||||||||| |||||||| |||||| | || |||||||| |||||||| | || || |
Sbjct: 508 gttgtcgaagccgatgatacggacaaaggcatcagggtaggccttcttggcatcttcgag 449
Query: 382 ctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtcca 441
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 448 ttccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtcca 389
Query: 442 gtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaacctt 501
|||| |||||||||||| || ||||| || || ||||||| ||| ||||||||||||
Sbjct: 388 atacctgccatcgtagtatccgggagacctgtggttctcacggtagacgaacccaacctt 329
Query: 502 gctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgcttaaggag 561
|||||||||||| ||||||||||||||||| || | |||||| |||| |||||| | |
Sbjct: 328 gctgaactcgagacaaggcacccacttggatcgaagcaggtactcgatctgcttca-aaa 270
Query: 562 ggccctccgtgctgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcga 621
| ||||| | |||||||||||| ||| || |||||||||||||||||||||||||| |
Sbjct: 269 gatcctccacggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaa 210
Query: 622 tgggccacacctgcatgcacctgatccttccaccgttgctga 663
| |||||||||||||||||| |||||||||| || |||||||
Sbjct: 209 ttggccacacctgcatgcacttgatccttccgccattgctga 168
>emb| X07515.1 |OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit (EC 4.1.1.39)
Length = 1110
Score = 212 bits (107), Expect = 1e-51
Identities = 290/347 (83%), Gaps = 3/347 (0%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
||||||||||||||| | ||||||||| | | ||||||||| |||||||| |||||
Sbjct: 836 aggcgatgaagctgatgagctgcacctgcctaacgttgtcgaagccgatgatacggacga 777
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || ||||||||| |||||||| ||||||| | ||| |||| ||||| ||||||||||
Sbjct: 776 atgcatcagggtacgccttcttggcctcctcgagctccttgacgacctgggtggcgtcgg 717
Query: 408 tgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggag 467
|||| |||||||| |||||||||||||| |||||||||| ||| |||||||| ||||| |
Sbjct: 716 tgcacccgaacatgggcagcttccacatggtccagtacctgccgtcgtagtatccagggg 657
Query: 468 atgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcacccact 527
| || || ||||||| ||| || || |||||||||||||||||||| |||| |||||
Sbjct: 656 acttgtggttctcacggtagacaaatccgaccttgctgaactcgaggcagggca-ccact 598
Query: 528 tggagcggatc-aggtagtcgacctgcttaaggagggccctccgtgctgagtggtggcaa 586
|||| |||| | ||||| |||| |||||| |||| || ||||| | |||| |||||||
Sbjct: 597 tggaacggagctaggtactcgatctgcttcagga-ggtcctccacggtgagcggtggcag 539
Query: 587 gtaagacagggtctcgaacttcttgatgccctcgatgggccacacct 633
||| || |||||||||||||||||||||||||| || ||||||||||
Sbjct: 538 gtaggagagggtctcgaacttcttgatgccctcaatcggccacacct 492
Score = 40.1 bits (20), Expect = 9.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatcct 649
||||||||||||||||||||
Sbjct: 403 acctgcatgcacctgatcct 384
>gb| AF008214.1 |AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS1) mRNA, complete cds
Length = 853
Score = 139 bits (70), Expect = 1e-29
Identities = 154/182 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| |||| |||||||||||| || |||||||||| |||||||||
Sbjct: 598 ggcttgtaggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatg 539
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | |||| ||||||||||||||| |||||||||||| || ||||||
Sbjct: 538 cggatgaaggcgtgggggtactccttcttgcactcctccacctccttcgccacctgcaca 479
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 478 gcgtcggtgcacccgaacatgggcagcttccacatggtccagtaccgcccgtcgtagtac 419
Query: 461 cc 462
||
Sbjct: 418 cc 417
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 591 gacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||| |||||||| | ||||||||| |||||||||| |||||||
Sbjct: 289 gacagggtctcaaacttcttcacgccctcgatcggccacaccttcatgcac 239
>emb| X00137.1 |LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit
(cDNA clone pLg ssu1)
Length = 776
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 530 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 471
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 470 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 411
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||||
Sbjct: 410 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtac 351
Query: 461 ccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggc 520
|| || || ||||||| ||||||| | | |||||| ||||| |||||||| ||| ||
Sbjct: 350 ccgggcgacgcgttgttctcacggtacacgaacccctccttggagaactcgatgcaggga 291
Query: 521 accca 525
|||||
Sbjct: 290 accca 286
Score = 48.1 bits (24), Expect = 0.037
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 585 aagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgca 640
||||| || ||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 227 aagtaggagagggtctcgaacttcttcaggccctccggcggccacacctgcatgca 172
>emb| X17235.1 |LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 764
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 515 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 456
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 455 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 396
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||||
Sbjct: 395 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtac 336
Query: 461 ccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggc 520
|| || || ||||||| ||||||| | | |||||| ||||| |||||||| ||| ||
Sbjct: 335 ccgggcgacgcgttgttctcacggtacacgaacccctccttggagaactcgatgcaggga 276
Query: 521 accca 525
|||||
Sbjct: 275 accca 271
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgca 640
||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 203 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 157
>emb| X17234.1 |LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 791
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 609 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 550
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 549 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 490
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 489 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 430
Query: 461 cc 462
||
Sbjct: 429 cc 428
Score = 50.1 bits (25), Expect = 0.009
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttcca 653
||||||||||||||||| | |||||| ||||||||||||||||| || | ||| ||
Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgcagctaaccctgccg 156
Query: 654 ccgttgctg 662
|||||||||
Sbjct: 155 ccgttgctg 147
>emb| X17233.1 |LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 791
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 607 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 548
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 547 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 488
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 487 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 428
Query: 461 cc 462
||
Sbjct: 427 cc 426
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgca 640
||||||||||||||||| | |||||| |||||||||||||||||
Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 169
>emb| X17231.1 |LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 800
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 628 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 569
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 568 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 509
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 508 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 449
Query: 461 cc 462
||
Sbjct: 448 cc 447
Score = 58.0 bits (29), Expect = 4e-05
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttcca 653
||||||||||||||||||| |||||| ||||||||||||||||| || | ||| ||
Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156
Query: 654 ccgttgctg 662
|||||||||
Sbjct: 155 ccgttgctg 147
>emb| X17230.1 |LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 858
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 604 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 545
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 544 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 485
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 484 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 425
Query: 461 cc 462
||
Sbjct: 424 cc 423
Score = 58.0 bits (29), Expect = 4e-05
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatccttcca 653
||||||||||||||||||| |||||| ||||||||||||||||| || | ||| ||
Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156
Query: 654 ccgttgctg 662
|||||||||
Sbjct: 155 ccgttgctg 147
>dbj| AK070257.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full
insert sequence
Length = 845
Score = 129 bits (65), Expect = 1e-26
Identities = 236/293 (80%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 520
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 519 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 460
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 459 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 400
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 399 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 340
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
|||||||| | ||||||||||||||| || |||| |||||| |||| ||||||
Sbjct: 339 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 287
Score = 99.6 bits (50), Expect = 1e-17
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||||||| ||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 261 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctgcatgcat 202
Query: 642 ctgatccttccaccgttgctga 663
||||||||||| || |||||||
Sbjct: 201 ctgatccttccgccattgctga 180
>dbj| AK068266.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full
insert sequence
Length = 1999
Score = 129 bits (65), Expect = 1e-26
Identities = 236/293 (80%)
Strand = Plus / Minus
Query: 263 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 322
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 522
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 521 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 462
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 461 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 402
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 502
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 401 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 342
Query: 503 ctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
|||||||| | ||||||||||||||| || |||| |||||| |||| ||||||
Sbjct: 341 ctgaactccaagcaaggcacccacttagatcggagcaggtactcgatctgctt 289
Score = 99.6 bits (50), Expect = 1e-17
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||||||| ||||| |||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 263 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctgcatgcat 204
Query: 642 ctgatccttccaccgttgctga 663
||||||||||| || |||||||
Sbjct: 203 ctgatccttccgccattgctga 182
>gb| AY693395.1 | Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, partial cds
Length = 195
Score = 125 bits (63), Expect = 2e-25
Identities = 143/167 (85%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 400 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||| ||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 195 ggcgtcagtgcagccgaacatgggcagcttccacattgtccagtacctgccgtcgtagta 136
Query: 460 cccaggagatgc-gttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaag 518
|| |||| ||| | | ||||||||||||||| ||||||||||||||||| | ||| |
Sbjct: 135 tccgggag-tgctgccgaactcacggaagatgaagccaaccttgctgaactccaagcagg 77
Query: 519 gcacccacttggagcggatcaggtagtcgacctgcttaaggagggcc 565
| ||||| ||||||||||||| |||||| |||||| |||||||||
Sbjct: 76 gaacccatttggagcggatcaaaaagtcgatctgcttcaggagggcc 30
>emb| AJ428877.1 |ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate
carboxylase small subunit percursor (rbcs gene)
Length = 686
Score = 123 bits (62), Expect = 8e-25
Identities = 140/166 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||| |||
Sbjct: 581 ggcttgtaggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatg 522
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||||| | || | ||||| ||||||| ||||||| | |||| || ||||| |||
Sbjct: 521 cggacgaaagcatgtgggtaagccttcttagcctcctcgagctcggcgacaacctgggtg 462
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 446
||||| ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 461 gcgtcagtgcacccgaacatgggcagcttccacatggtccagtacc 416
>emb| X17232.1 |LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 936
Score = 115 bits (58), Expect = 2e-22
Identities = 151/182 (82%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 585 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 526
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 525 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 466
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
||||||||||| |||||||| |||| ||||||||| |||||||||| || |||||||||
Sbjct: 465 gcgtcggtgcagccgaacatgggcaacttccacatcgtccagtacctcccgtcgtagtac 406
Query: 461 cc 462
||
Sbjct: 405 cc 404
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgca 640
|||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 215 agggtctcaaacttcttgaggccctccggcggccacacctgcatgca 169
>gb| L24497.1 |PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, complete cds
Length = 813
Score = 101 bits (51), Expect = 3e-18
Identities = 171/211 (81%)
Strand = Plus / Minus
Query: 274 gcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatcc 333
|||||| |||||| | |||||||| |||| ||||||||| ||||| | |||||||||||
Sbjct: 559 gcctggaggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatcc 500
Query: 334 gatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcac 393
|||||| |||| | | | ||||| |||||||| |||| |||| ||| || | |||
Sbjct: 499 gatgatacggatgaaggattgggggtaggccttcttggcctcttccagctctttcaacac 440
Query: 394 ctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatc 453
||| | | |||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 439 ctgggaagagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatc 380
Query: 454 gtagtacccaggagatgcgttgtgctcacgg 484
||||| || || ||| ||||| |||||||
Sbjct: 379 atagtatcctggggatctgttgttctcacgg 349
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
|||||| |||||||||||||||||
Sbjct: 244 gtaagagagggtctcgaacttctt 221
>gb| L10212.1 |CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit
gene, complete cds
Length = 3552
Score = 101 bits (51), Expect = 3e-18
Identities = 147/179 (82%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| |||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 2527 ggcttgtaggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgata 2468
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| || |||||| |
Sbjct: 2467 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcgaccacctgggat 2408
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 2407 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2349
>dbj| AB236868.1 | Panax ginseng mRNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds
Length = 790
Score = 97.6 bits (49), Expect = 4e-17
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 278 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 337
|||||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||| ||
Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcgaatccaata 517
Query: 338 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 397
|| |||| || || | ||||||||||||||| |||||| || || || | ||||||
Sbjct: 516 attcggatgtatgcatttgggtactccttcttgcactcctctacttctttcaacacctga 457
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
| | || |||||||| ||||| ||||||||||||||||||||||| || || || |||
Sbjct: 456 gatgaatcagtgcatccaaacatgggcagcttccacattgtccagtaacgtccgtcatag 397
Query: 458 taccc 462
|||||
Sbjct: 396 taccc 392
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 574 tgagtggtggcaagtaagacagggtctcgaacttctt 610
||||| |||| | ||||||||| ||||||||||||||
Sbjct: 278 tgagttgtgggaggtaagacagagtctcgaacttctt 242
>gb| AF039015.1 |AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 483
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF039013.1 |AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 483
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF039009.1 |AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgtccatcgtagtacccaggagat 483
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF024574.1 |AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type III (rbcS3) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 798
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 419 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 363
Score = 40.1 bits (20), Expect = 9.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||||||||| | ||| |||||||||| || | |||||||
Sbjct: 239 agggtctcgaacttcttcaaccccacgatgggccagactttcatgcac 192
>gb| BC038257.1 | Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds
Length = 763
Score = 95.6 bits (48), Expect = 2e-16
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| || | ||| ||||| ||||| |||||||||| || |||||
Sbjct: 582 ggcttgtaggcaatgaaactaatgcattgcacttgacgtttgttgtcgaacccaatgatc 523
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| ||| | || |||||||| |||||||||||||||| ||||| || | |||||| |
Sbjct: 522 ctaacaaaagcatcagggtaagccttcttgacctcctcaacctcattcaccacctgagct 463
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
| ||| ||||| ||||||||||||| ||||||||| |||||||| || ||||| |||||
Sbjct: 462 gggtcagtgcacccgaacataggcaacttccacatagtccagtagcgaccatcatagtat 403
Query: 461 ccaggagatgcgttgtgctcacgg 484
|| || ||| |||||||||||||
Sbjct: 402 cctggcgatttgttgtgctcacgg 379
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 574 tgagtggtggcaagtaagacagggtctcgaacttctt 610
|||| ||||| | |||||| |||||||||||||||||
Sbjct: 287 tgagaggtggaaggtaagagagggtctcgaacttctt 251
>emb| Y09214.1 |ZMRUBSMSU Z.mays rubisco small subunit gene
Length = 1274
Score = 95.6 bits (48), Expect = 2e-16
Identities = 156/192 (81%)
Strand = Plus / Minus
Query: 268 ctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtc 327
||||| ||| || |||||| ||||||||||||||||||||||| ||| | | ||||||
Sbjct: 823 ctcgctgccggggggcttgtaggcgatgaagctgacgcactgcgtctgcctgacgttgtc 764
Query: 328 gaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgtt 387
||| ||||||| |||| | ||||| |||||| | || |||||| || ||| ||
Sbjct: 763 gaagccgatgacgcggtggaaggcgtccgggtacgcggcgatggcctcctgcagctcctt 704
Query: 388 gagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccg 447
| |||||| |||||||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 703 gtacacctgcgtggcgtcggtgcagccgaacatgggcagcttccacatggtccagtagcg 644
Query: 448 gccatcgtagta 459
||| ||||||||
Sbjct: 643 gccgtcgtagta 632
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||| ||||||||| ||||||||||
Sbjct: 344 acctgcatgcaccggatccttccgccgttgctga 311
Score = 44.1 bits (22), Expect = 0.58
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgc 639
|||| ||| ||||| ||||||||||||||| |||| | | ||||||||||||||||
Sbjct: 510 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgc 453
>dbj| D00572.1 |PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete
cds
Length = 844
Score = 93.7 bits (47), Expect = 7e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 584 ggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgata 525
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | | | ||||| |||||||| |||| |||| ||| || | |||||| |
Sbjct: 524 cggatgaaggactgggggtaagccttcttggcctcttccagctccttcaacacctgggaa 465
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 464 gagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatcatagta 406
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
|||||| |||||||||||||||||
Sbjct: 276 gtaagagagggtctcgaacttctt 253
>emb| X65494.1 |MSCARB Malus (unidentified species of crab apple) mRNA for
rubisco-1,5-bisphosphate carboxylase
Length = 853
Score = 93.7 bits (47), Expect = 7e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 588 ggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgata 529
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | | | ||||| |||||||| |||| |||| ||| || | |||||| |
Sbjct: 528 cggatgaaggattgggggtaggccttcttggcctcttccagctctttcaacacctgggaa 469
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 468 gagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatcatagta 410
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
|||||| |||||||||||||||||
Sbjct: 280 gtaagagagggtctcgaacttctt 257
>gb| M38316.1 |CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate
carboxylase/oxygenase small subunit (rbcS-2) mRNA,
complete cds
Length = 680
Score = 93.7 bits (47), Expect = 7e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| |||| |||||| || ||||||| ||||||||||||||||||
Sbjct: 558 ggcttgtaggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgata 499
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| | |||||| |
Sbjct: 498 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggat 439
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || ||||| |||||
Sbjct: 438 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcatagta 380
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
||||||||| ||||||||||||||
Sbjct: 250 gtaagacagagtctcgaacttctt 227
>gb| AF034479.1 | Zantedeschia aethiopica ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear
gene encoding chloroplast protein, complete cds
Length = 968
Score = 91.7 bits (46), Expect = 3e-15
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||| || |||||||| ||||||||| || ||| |||||||||| ||||||||
Sbjct: 564 ggcttgtaggtgaggaagctgatgcactgcacttggcgcgtgttgtcgaagccgatgatc 505
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | ||| |||||| |||| || ||| |||||||| ||||||||||| | |
Sbjct: 504 cggttgaagtagtcggggtacgccttactgcactcgtccacctccttgagcacctgggag 445
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 460
| ||||||||| |||||||| |||| ||||||||| |||||||| || || |||||||||
Sbjct: 444 gagtcggtgcacccgaacatgggcaacttccacatggtccagtagcgcccgtcgtagtac 385
Query: 461 cc 462
||
Sbjct: 384 cc 383
Score = 73.8 bits (37), Expect = 6e-10
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 574 tgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacct 633
|||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 272 tgagtggtggcaggtaggacagggtctcgaacttcttcttgccctccggcggccacacct 213
Query: 634 gcatgcacc 642
|||||||||
Sbjct: 212 gcatgcacc 204
>gb| AY843526.1 | Ammopiptanthus mongolicus ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit mRNA, complete cds;
chloroplast
Length = 824
Score = 89.7 bits (45), Expect = 1e-14
Identities = 156/193 (80%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
|||||||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||
Sbjct: 564 agcctggtggcttgtaggcaatgaaactgatgcactgaacttgacgtttgttgtcgaatc 505
Query: 333 cgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagca 392
| ||||| ||||| | || ||||| ||||||||| |||||| | ||| || | ||
Sbjct: 504 caatgattcggacgaaagcagtggggtattccttcttgcactcctcaagctccttcatca 445
Query: 393 cctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccat 452
|||||| || || |||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 444 cctgtgaagcatcactgcacccaaacataggcagcttccacatggtccagtagcgtccat 385
Query: 453 cgtagtacccagg 465
| ||||| |||||
Sbjct: 384 catagtatccagg 372
Score = 40.1 bits (20), Expect = 9.1
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 575 gagtggtggcaagtaagacagggtctcgaacttctt 610
||||||||||| ||| || || ||||||||||||||
Sbjct: 260 gagtggtggcaggtaggaaagagtctcgaacttctt 225
>gb| AF044400.1 |AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 534
Score = 89.7 bits (45), Expect = 1e-14
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 408 tgcatccgaacataggcagcttccacattgtccagta 444
|||||||||||||||||| ||||||||||||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacattgtccagta 220
>gb| AF044399.1 |AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 629
Score = 89.7 bits (45), Expect = 1e-14
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 408 tgcatccgaacataggcagcttccacattgtccagta 444
|||||||||||||||||| ||||||||||||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacattgtccagta 220
>gb| AF039012.1 |AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 89.7 bits (45), Expect = 1e-14
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttcaacattgtccagtaccgcccatcgtagtacccaggagat 483
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF039010.1 |AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 89.7 bits (45), Expect = 1e-14
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 483
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF031543.1 |AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small
subunit type IV (rbcS4) mRNA, complete cds
Length = 732
Score = 89.7 bits (45), Expect = 1e-14
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 414 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 358
Score = 40.1 bits (20), Expect = 9.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||||||||| | ||| |||||||||| || | |||||||
Sbjct: 234 agggtctcgaacttcttcaaccccacgatgggccagactttcatgcac 187
>gb| AF024572.1 |AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type I (rbcS1) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 713
Score = 89.7 bits (45), Expect = 1e-14
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 413 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 357
Score = 40.1 bits (20), Expect = 9.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||||||||| | ||| |||||||||| || | |||||||
Sbjct: 233 agggtctcgaacttcttcaaccccacgatgggccagactttcatgcac 186
>ref| NM_202369.1 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090
transcript variant AT1G67090.2 mRNA, complete cds
Length = 871
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 549 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 490
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 489 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 430
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 429 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 370
Query: 457 gta 459
|||
Sbjct: 369 gta 367
>ref| NM_105379.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090
transcript variant AT1G67090.1 mRNA, complete cds
Length = 878
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 457 gta 459
|||
Sbjct: 376 gta 374
>gb| AC007152.9 | Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
sequence
Length = 90387
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Plus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 78183 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 78242
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 78243 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 78302
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 78303 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 78362
Query: 457 gta 459
|||
Sbjct: 78363 gta 78365
>gb| AY142543.1 | Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence
Length = 2116
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 1929 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 1870
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| | | ||| | ||||||||||||||| || || || || || | |||||| | |
Sbjct: 1869 ctaatgaaggcgcccgggtactccttcttgcattcttcaacttccttcaacacctgagcg 1810
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 1809 gagtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 1751
>gb| BT000362.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 457 gta 459
|||
Sbjct: 348 gta 346
>gb| AY097366.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 543
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 457 gta 459
|||
Sbjct: 348 gta 346
>gb| AY093380.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 457 gta 459
|||
Sbjct: 348 gta 346
>gb| AY065101.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 617
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 550 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 491
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 490 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 431
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 430 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 371
Query: 457 gta 459
|||
Sbjct: 370 gta 368
>gb| AY062711.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 772
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 457 gta 459
|||
Sbjct: 374 gta 372
>gb| AY062612.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 750
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 457 gta 459
|||
Sbjct: 374 gta 372
>gb| AY059940.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 721
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 557 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 498
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 497 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 438
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 437 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 378
Query: 457 gta 459
|||
Sbjct: 377 gta 375
>gb| AY058831.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 788
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 457 gta 459
|||
Sbjct: 374 gta 372
>gb| AY054188.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 711
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 457 gta 459
|||
Sbjct: 376 gta 374
>gb| AY054581.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 702
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 557 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 498
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 497 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 438
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 437 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 378
Query: 457 gta 459
|||
Sbjct: 377 gta 375
>gb| AF410291.1 |AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 752
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 457 gta 459
|||
Sbjct: 375 gta 373
>gb| AY050459.1 | Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds
Length = 3162
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 457 gta 459
|||
Sbjct: 376 gta 374
>gb| AC004146.1 |AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence
Length = 101933
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Plus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 2072 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 2131
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 2132 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 2191
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 2192 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 2251
Query: 457 gta 459
|||
Sbjct: 2252 gta 2254
>gb| AF325004.2 |AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete
cds
Length = 754
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 457 gta 459
|||
Sbjct: 375 gta 373
>gb| AF372874.1 |AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 632
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 379 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 320
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 319 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 260
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 259 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 200
Query: 457 gta 459
|||
Sbjct: 199 gta 197
>emb| BX814212.1 |CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB61ZA04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 735
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 534 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 475
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 474 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 415
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 414 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 355
Query: 457 gta 459
|||
Sbjct: 354 gta 352
>emb| BX818334.1 |CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 735
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 534 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 475
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 474 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 415
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 414 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 355
Query: 457 gta 459
|||
Sbjct: 354 gta 352
>emb| BX818366.1 |CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 697
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 496 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 437
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 436 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 377
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 376 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 317
Query: 457 gta 459
|||
Sbjct: 316 gta 314
>emb| BX817617.1 |CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 730
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 529 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 470
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 469 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 410
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 409 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 350
Query: 457 gta 459
|||
Sbjct: 349 gta 347
>gb| AF325011.1 |AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds
Length = 825
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 457 gta 459
|||
Sbjct: 375 gta 373
>emb| Y00322.1 |ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit (EC 4.1.1.39)
Length = 1648
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 1147 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 1088
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 1087 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 1028
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 1027 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 969
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||| ||||||||| ||||||||||
Sbjct: 639 acctgcatgcaccggatccttccgccgttgctga 606
>emb| X13711.1 |NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate
carboxylase small subunit
Length = 2293
Score = 85.7 bits (43), Expect = 2e-13
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| || ||
Sbjct: 1980 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataat 1921
Query: 340 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 399
||||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1920 acggacccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1861
Query: 400 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 446
||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1860 ggcatcagtgcatccgaacataggtagcttccacatggtccagtacc 1814
>emb| X03821.1 |PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate
carboxylase small subunit
Length = 1314
Score = 85.7 bits (43), Expect = 2e-13
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
||||| |||||||| |||||||| |||||||||||||| |||||||||| |||||| |||
Sbjct: 1058 gtggcatcggtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 999
Query: 458 tacccaggagatgcgttgtgctcacgg 484
|||| |||||||| | || |||||||
Sbjct: 998 taccttggagatgcatggtactcacgg 972
Score = 61.9 bits (31), Expect = 2e-06
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
||||||| |||||| |||| ||||| |||| ||| ||||| ||||||| |||||||||||
Sbjct: 1183 agcctgggggcttgtaggcaatgaaactgatgcattgcacttgacgcacgttgtcgaatc 1124
Query: 333 cgatgat 339
| |||||
Sbjct: 1123 caatgat 1117
>emb| X06535.1 |ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit
(RuBPC; EC 4.1.1.39)
Length = 830
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 503
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 502 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 443
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 442 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 384
Score = 75.8 bits (38), Expect = 2e-10
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||| ||| ||||| ||||||||||||||| |||| | | ||||||||||||||||||
Sbjct: 262 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 203
Query: 642 ctgatccttccaccgttgctga 663
| ||||||||| ||||||||||
Sbjct: 202 cggatccttccgccgttgctga 181
>gb| BT002076.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 2e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 457 gta 459
|||
Sbjct: 348 gta 346
>gb| AY103730.1 | Zea mays PCO095823 mRNA sequence
Length = 1172
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 682 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 623
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 622 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 563
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 562 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 504
Score = 75.8 bits (38), Expect = 2e-10
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||| ||| ||||| ||||||||||||||| |||| | | ||||||||||||||||||
Sbjct: 382 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 323
Query: 642 ctgatccttccaccgttgctga 663
| ||||||||| ||||||||||
Sbjct: 322 cggatccttccgccgttgctga 301
>gb| M86717.1 |SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit gene, complete cds
Length = 2328
Score = 85.7 bits (43), Expect = 2e-13
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 1640 gcgtcggtgcagccgaacatgggcagcttccacatggtccagtaccggccgtcgtagta 1582
Score = 60.0 bits (30), Expect = 1e-05
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 498 ccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcgacctgctt 555
||||||||||||||||||| |||||||| ||| ||| | ||||||||| ||||||||
Sbjct: 1543 ccttgctgaactcgaggcagggcacccagttgttgcgcagcaggtagtccacctgctt 1486
Score = 52.0 bits (26), Expect = 0.002
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
||||||||||||| ||||||||| ||||||||||
Sbjct: 1317 acctgcatgcaccggatccttccgccgttgctga 1284
>emb| X14564.1 |ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate
carboxylase small subunit (rbcS) (EC 4.1.1.39)
Length = 9647
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 9225 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 9166
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| | | ||| | ||||||||||||||| || || ||||| || | ||| || | |
Sbjct: 9165 ctaatgaaggcgcccgggtactccttcttgcattcttcaacctccttcaacacttgagcg 9106
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 9105 gagtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 9047
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 2256 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 2200
Score = 69.9 bits (35), Expect = 1e-08
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 5526 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 5467
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 5466 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 5407
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 5406 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 5348
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
|||||| |||| ||||| |||| |||||| || ||||| |||||||||||||||||||
Sbjct: 2378 ggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgatgat 2320
>gb| M36685.1 |TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene,
complete cds
Length = 2293
Score = 85.7 bits (43), Expect = 2e-13
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| || ||
Sbjct: 1980 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataat 1921
Query: 340 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 399
||||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1920 acggacccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1861
Query: 400 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 446
||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1860 ggcatcagtgcatccgaacataggtagcttccacatggtccagtacc 1814
>gb| M38318.1 |CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate
carboxylase/oxygenase small subunit (rbcS-4) mRNA,
complete cds
Length = 747
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 551 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 492
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 491 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 432
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 431 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 373
>dbj| D00170.1 |MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small
subunit, complete cds
Length = 830
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 503
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 502 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 443
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 442 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 384
Score = 75.8 bits (38), Expect = 2e-10
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 582 ggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
|||| ||| ||||| ||||||||||||||| |||| | | ||||||||||||||||||
Sbjct: 262 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 203
Query: 642 ctgatccttccaccgttgctga 663
| ||||||||| ||||||||||
Sbjct: 202 cggatccttccgccgttgctga 181
>gb| L10215.1 |CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small
subunit genes, complete cds, (clone: rbcs-5) rubisco
small submnit gene, partial cds
Length = 8682
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 7689 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 7630
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 7629 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 7570
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 7569 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 7511
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 3707 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 3648
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 3647 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 3588
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 3587 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 3529
Score = 71.9 bits (36), Expect = 3e-09
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| |||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 1341 ggcttgtaggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgata 1282
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 1281 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 1222
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagta 444
| ||| ||||| |||||||| |||| ||||||||||||||||||
Sbjct: 1221 gggtcagtgcaaccgaacatgggcaacttccacattgtccagta 1178
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
||||||||| ||||||||||||||
Sbjct: 918 gtaagacagagtctcgaacttctt 895
>gb| L10214.1 |CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit
gene, complete cds
Length = 2671
Score = 85.7 bits (43), Expect = 2e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| |||| |||||| || ||||||| ||||||||||||||||||
Sbjct: 2040 ggcttgtaggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgata 1981
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||| | || |||||||| |||||||| ||||||| | ||| | |||||| |
Sbjct: 1980 cgggtgaaggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggat 1921
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||| ||||| |||||||| |||| |||||||||||||||||| || ||||| |||||
Sbjct: 1920 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcatagta 1862
Score = 40.1 bits (20), Expect = 9.1
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 587 gtaagacagggtctcgaacttctt 610
||||||||| ||||||||||||||
Sbjct: 1522 gtaagacagagtctcgaacttctt 1499
>gb| AF039007.1 |AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 7e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 416 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 272 agggtctcgaacttcttcaaccccacgatgggccagacct 233
>gb| AF039006.1 |AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 7e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 416 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
Score = 40.1 bits (20), Expect = 9.1
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 272 agggtctcgaacttcttcaaccccacgatgggccagacct 233
>gb| AF039005.1 |AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 7e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 416 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
>gb| M29642.1 |PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA
(clone pSSU 51), partial cds
Length = 212
Score = 83.8 bits (42), Expect = 7e-13
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
||||| || ||||| |||||||| |||||||||||||| |||||||||| |||||| |||
Sbjct: 77 gtggcatcagtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 18
Query: 458 tacccaggagatgc 471
||||| ||||||||
Sbjct: 17 taccctggagatgc 4
>ref| NM_123204.3 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430
mRNA, complete cds
Length = 808
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 431 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 375
>ref| NM_123202.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410
transcript variant AT5G38410.1 mRNA, complete cds
Length = 925
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>ref| NM_001036904.1 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410
transcript variant AT5G38410.2 mRNA, complete cds
Length = 963
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 491 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 435
>gb| AY267351.1 | Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit (RbcS2) mRNA, complete cds
Length = 787
Score = 81.8 bits (41), Expect = 3e-12
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||||||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 555 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 496
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 495 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggctgagtcgg 436
Query: 408 tgcatccgaacataggcagcttccacattgtccagta 444
|||||||||||||||||| ||||||||||||||||||
Sbjct: 435 tgcatccgaacataggcaacttccacattgtccagta 399
>gb| AY143814.1 | Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds
Length = 546
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| BT000721.1 | Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose
bisphosphate carboxylase small chain 3b precursor
(RuBisCO small subunit 3b) (At5g38410) mRNA, complete
cds
Length = 772
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 454 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 398
>gb| AY051025.1 | Arabidopsis thaliana putative RuBisCO small 3b subunit precursor
(At5g38410) mRNA, complete cds
Length = 577
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AF360124.1 | Arabidopsis thaliana putative ribulose bisphosphate carboxylase
small chain 3b precursor (At5g38410) mRNA, complete cds
Length = 720
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>emb| X02353.1 |NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit
Length = 2362
Score = 81.8 bits (41), Expect = 3e-12
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 1972 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 1913
Query: 340 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 399
|||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1912 acggatccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1853
Query: 400 ggcgtcggtgcatccgaacataggcagcttccacattgtccagta 444
||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 1852 ggcatcagtgcatccgaacataggtagcttccacatggtccagta 1808
>emb| AJ843975.1 | Plantago major mRNA for Rubisco SSU (rbcs1a gene)
Length = 761
Score = 81.8 bits (41), Expect = 3e-12
Identities = 155/193 (80%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
|||||||||||||| |||| ||||| |||| |||||| || || || | ||||||||| |
Sbjct: 565 agcctggtggcttggaggcaatgaaactgatgcactggacttggcgaacgttgtcgaagc 506
Query: 333 cgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagca 392
||||||| | ||| | |||| ||||| ||||||||| |||||||| ||| | |
Sbjct: 505 cgatgatcctgacccaggcgttggggtattccttcttgcactcctccagctcagcaatga 446
Query: 393 cctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccat 452
| || |||| ||||||||||||||||| || |||||||||||||||||||| || || |
Sbjct: 445 cttggctggcatcggtgcatccgaacatgggtagcttccacattgtccagtagcgtccgt 386
Query: 453 cgtagtacccagg 465
| ||||| |||||
Sbjct: 385 catagtatccagg 373
Score = 48.1 bits (24), Expect = 0.037
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 505 gaactcgaggcaaggcacccacttggagcggatcaggtagtcga 548
|||||| |||||||| | |||||||||||||| ||||||||||
Sbjct: 330 gaactcaaggcaaggaatccacttggagcggagaaggtagtcga 287
>gb| AY098970.1 | Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds
Length = 546
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AF462822.1 |AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds
Length = 764
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>gb| AY065026.1 | Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds
Length = 2204
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 77 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 21
>gb| AY064686.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase small chain
3b precursor (RuBisCO small subunit 3b) (At5g38410;
MXI10.13) mRNA, complete cds
Length = 595
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AY054552.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase small chain
3b precursor (RuBisCO small subunit 3b) (At5g38410;
MXI10.13) mRNA, complete cds
Length = 772
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 445 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 389
>gb| AF410314.1 |AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 728
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>gb| AF410283.1 |AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 652
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 428 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 372
>gb| AF044401.1 |AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 532
Score = 81.8 bits (41), Expect = 3e-12
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 408 tgcatccgaacataggcagcttccacattgtccagta 444
|||||||||||||||||| ||||||||| ||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacatcgtccagta 220
>emb| BX833384.1 |CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 703
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 429 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 373
>emb| BX830381.1 |CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB77ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 717
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 411 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 355
>emb| BX830099.1 |CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB59ZG04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 372
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 135 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 79
>emb| BX832776.1 |CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 715
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 441 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 385
>emb| BX831203.1 |CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS68ZD03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 706
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 430 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 374
>emb| BX833789.1 |CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 700
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 424 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 368
>emb| BX833660.1 |CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 716
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 440 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 384
>emb| BX832874.1 |CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 709
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 435 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 379
>gb| BT005730.1 | Arabidopsis thaliana clone RAFL15-16-B15 (R20676)
Length = 1794
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 448 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 392
>dbj| AB005248.1 | Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10
Length = 83646
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 57626 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 57682
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 50777 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 50833
Score = 69.9 bits (35), Expect = 1e-08
Identities = 143/179 (79%)
Strand = Plus / Plus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 54357 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 54416
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 54417 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 54476
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 54477 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 54535
>gb| AF039014.1 |AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 592
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 480
Score = 48.1 bits (24), Expect = 0.037
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||||||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccacacct 244
>gb| AF039011.1 |AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 591
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 535 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 479
Score = 48.1 bits (24), Expect = 0.037
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||||||||
Sbjct: 282 agggtctcgaacttcttcaaccccacgatgggccacacct 243
>gb| AF039008.1 |AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 592
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 480
Score = 48.1 bits (24), Expect = 0.037
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacct 633
||||||||||||||||| | ||| |||||||||||||||
Sbjct: 283 agggtctcgaacttcttcaaccccacgatgggccacacct 244
>gb| AF039004.1 |AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence
Length = 594
Score = 81.8 bits (41), Expect = 3e-12
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 538 ccgaacatgggcagcttc-acattgtccagtaccgcccatcgtagtacccaggagat 483
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 585 aagtaagacagggtctcgaacttcttgatgccctcgatgggccacacct 633
||||| || ||||||||||||||||| | ||| |||||||||| ||||
Sbjct: 292 aagtaggagagggtctcgaacttcttcaaccccacgatgggccagacct 244
>gb| AF031544.1 |AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small
subunit type V (rbcS5) mRNA, complete cds
Length = 728
Score = 81.8 bits (41), Expect = 3e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 469
|||||||| |||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 441 ccgaacatgggcagcttccacatcgtccagtagcgcccatcgtagtacccaggagat 385
Score = 40.1 bits (20), Expect = 9.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||||||||| | ||| |||||||||| || | |||||||
Sbjct: 261 agggtctcgaacttcttcaaccccacgatgggccagactttcatgcac 214
>gb| AF303941.1 |AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS3 mRNA, complete cds
Length = 772
Score = 79.8 bits (40), Expect = 1e-11
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 333 cgatgatgcgga 344
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 466
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 467 gatgcgttgtgctcacgg 484
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| AF303940.1 |AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS2 mRNA, complete cds
Length = 830
Score = 79.8 bits (40), Expect = 1e-11
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 333 cgatgatgcgga 344
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 466
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 467 gatgcgttgtgctcacgg 484
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| AF303939.1 |AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 mRNA, complete cds
Length = 750
Score = 79.8 bits (40), Expect = 1e-11
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 333 cgatgatgcgga 344
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 466
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 467 gatgcgttgtgctcacgg 484
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| U39567.1 |GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 765
Score = 79.8 bits (40), Expect = 1e-11
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 273 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 332
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 563 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 504
Query: 333 cgatgatgcgga 344
||||||| ||||
Sbjct: 503 cgatgatacgga 492
Score = 67.9 bits (34), Expect = 4e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 466
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 429 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 370
Query: 467 gatgcgttgtgctcacgg 484
|| |||||||||||||
Sbjct: 369 gacctgttgtgctcacgg 352
>gb| AF024573.1 |AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type II (rbcS2) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 784
Score = 79.8 bits (40), Expect = 1e-11
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggaga 468
|||||||| |||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 417 ccgaacatgggcagcttccacatcgtccagtagcgcccatcgtagtacccaggaga 362
Score = 40.1 bits (20), Expect = 9.1
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 594 agggtctcgaacttcttgatgccctcgatgggccacacctgcatgcac 641
||||||||||||||||| | ||| |||||||||| || | |||||||
Sbjct: 237 agggtctcgaacttcttcaaccccacgatgggccagactttcatgcac 190
>emb| AJ786660.1 | Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate
carboxylase/oxygenase small subunit (rbcS1 gene)
Length = 459
Score = 77.8 bits (39), Expect = 4e-11
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccga 335
|||||||||| |||||||||| |||| ||||||||| |||||| |||||||||||||||
Sbjct: 459 tggtggcttgtaggcgatgaaactgatgcactgcacttgacgcttgttgtcgaatccga 401
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagta 444
||||||||| |||| || ||||||||||||||||||||
Sbjct: 329 gtgcatccgtacatgggaagcttccacattgtccagta 292
>emb| X13611.1 |ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate
carboxylase small subunit (EC 4.1.1.39)
Length = 2821
Score = 77.8 bits (39), Expect = 4e-11
Identities = 147/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| | ||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 2501 tggtggcttgtaggcaacgaaactgatgcactggacttgacgggtgttgtcgaatccgat 2442
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 2441 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 2382
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 2381 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 2322
Query: 457 gta 459
|||
Sbjct: 2321 gta 2319
>gb| AY093388.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 77.8 bits (39), Expect = 4e-11
Identities = 147/183 (80%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 337 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 396
|| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 tattctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 397 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 456
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 457 gta 459
|||
Sbjct: 348 gta 346
>gb| AF312228.1 |AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit precursor, gene, partial cds, nuclear gene
for chloroplast product
Length = 353
Score = 77.8 bits (39), Expect = 4e-11
Identities = 135/167 (80%)
Strand = Plus / Minus
Query: 293 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 352
||||| |||| ||||||||| |||||| ||||||| |||||||| || ||||| | |
Sbjct: 350 atgaaactgatgcactgcacttgacgcttgttgtcaaatccgataattcggacgaatgaa 291
Query: 353 tcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcat 412
| ||||| ||||||| ||||||| | ||||| || | ||||| || || || |||||
Sbjct: 290 tgtgggtattccttctggacctccccaacctccttcaaaacctgggttgcatctgtgcac 231
Query: 413 ccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|| |||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 230 ccatacatgggcagcttccacattgtccagtagcgtccatcgtagta 184
>emb| X55937.1 |BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate
carboxylase/oxygenase small subunit
Length = 2006
Score = 77.8 bits (39), Expect = 4e-11
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||||
Sbjct: 1516 tggtggcttgtaggcgatgaaactgatgcactggacctgacggttgttgtcgaatccgat 1457
Query: 337 gat 339
|||
Sbjct: 1456 gat 1454
Score = 73.8 bits (37), Expect = 6e-10
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 1386 gtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtagta 1334
>gb| AY273795.1 | Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit mRNA, partial cds; nuclear gene for chloroplast
product
Length = 357
Score = 75.8 bits (38), Expect = 2e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 362 tccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacata 421
||||||| ||||||| | ||||| || | |||||||| || || ||||| || |||||
Sbjct: 296 tccttctggacctccccaacctccttcaaaacctgtgttgcatctgtgcacccaaacatg 237
Query: 422 ggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||||||||| || |||||||||||
Sbjct: 236 ggcagcttccacattgtccagtagcgtccatcgtagta 199
>gb| DQ336280.1 | Vitis pseudoreticulata ribulose-1,5-bisphophate
carboxylase/oxygenase small subunit mRNA, complete cds
Length = 543
Score = 75.8 bits (38), Expect = 2e-10
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 323 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 382
||||||||||||||||| |||| | |||| |||||||||| || || | || | ||||
Sbjct: 494 ttgtcgaatccgatgattcggatgtgggcgttagggtactccgtcctggcttcttgcacc 435
Query: 383 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 442
|| || | |||||| | | ||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 434 tccttaatcacctgggctgagtcagtgcacccgaacatgggcagcttccacatggtccag 375
Query: 443 taccggccatcgtagtacccaggagatgcgttgtgctc 480
|||| || |||||||| || |||||| |||||||||
Sbjct: 374 taccttccgtcgtagtatcctggagatctgttgtgctc 337
>gb| AF044398.1 |AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 608
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagta 220
Score = 60.0 bits (30), Expect = 1e-05
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 293 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 352
||||| |||||||| ||||| ||||| | |||||||||||||||||| |||| | ||
Sbjct: 371 atgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatccatgcc 312
Query: 353 tcagggtactccttcttg 370
| ||||||||||||||||
Sbjct: 311 tgagggtactccttcttg 294
>gb| AF044396.1 |AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small
subunit R2 (rbcS-R2) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 574
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagta 220
Score = 46.1 bits (23), Expect = 0.15
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||| ||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 376 aggcaatgaaactgatgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 317
Query: 348 acgcgtcagggtactccttcttg 370
| || | ||||||||||||||||
Sbjct: 316 atgcctgagggtactccttcttg 294
>emb| BX833317.1 |CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 733
Score = 75.8 bits (38), Expect = 2e-10
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 406 ggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 437 ggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 384
Score = 46.1 bits (23), Expect = 0.15
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 562 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgat 504
>gb| U29939.1 |FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS7) mRNA, complete cds
Length = 743
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 420 gtcggtgcatccgaacataggcaacttccacattgtccagta 379
>gb| U29938.1 |FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS6) mRNA, complete cds
Length = 724
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 405 gtcggtgcatccgaacataggcaacttccacattgtccagta 364
Score = 52.0 bits (26), Expect = 0.002
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 293 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 352
||||| |||| ||| ||||| ||||| | |||||||||||||||||| |||| | ||
Sbjct: 515 atgaaactgatgcattgcacttgacggacgttgtcgaatccgatgatacggatccatgcc 456
Query: 353 tcagggtactccttcttg 370
| ||||||||||||||||
Sbjct: 455 tgagggtactccttcttg 438
>gb| U29937.1 |FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS5) mRNA, complete cds
Length = 731
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 408 gtcggtgcatccgaacataggcaacttccacattgtccagta 367
>gb| U29936.1 |FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS4) mRNA, complete cds
Length = 753
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 gtcggtgcatccgaacataggcaacttccacattgtccagta 396
>gb| U29935.1 |FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS3) mRNA, complete cds
Length = 746
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 422 gtcggtgcatccgaacataggcaacttccacattgtccagta 381
>gb| U29934.1 |FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS2) mRNA, complete cds
Length = 763
Score = 75.8 bits (38), Expect = 2e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagta 444
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 434 gtcggtgcatccgaacataggcaacttccacattgtccagta 393
Score = 54.0 bits (27), Expect = 6e-04
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| | |||||||| |||| |||||| || ||||| | |||||| |||||||||||
Sbjct: 557 tggcttggaagcgatgaaactgatgcactgaacttgacgaacgttgtcaaatccgatgat 498
Query: 340 gcggacatacgcgtcagggtactccttcttg 370
|||| | || | ||||||||||||||||
Sbjct: 497 acggatccatgcctgagggtactccttcttg 467
>emb| X01722.1 |NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose
bisphosphate carboxylase
Length = 796
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 591 tggcttgtaggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 532
Query: 340 gcgga 344
||||
Sbjct: 531 acgga 527
Score = 67.9 bits (34), Expect = 4e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
||||| || ||||||||||||||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 473 gtggcatcagtgcatccgaacataggtagcttccacatggtccagtatctgccatcatag 414
Query: 458 ta 459
||
Sbjct: 413 ta 412
>emb| BX832995.1 |CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 550
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||
Sbjct: 259 gtcggtgcatccgaacaatggaagcctccacattgtccagtaccgtccatcgtagta 203
>emb| BX830542.1 |CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB8ZB01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 538
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||||| | || ||||||||||||||||||||||| |||||||||||
Sbjct: 228 gtcggtgcatccgaaaaatggaagcttccacattgtccagtaccgtccatcgtagta 172
>dbj| AB004883.1 | Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds
Length = 931
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||||||
Sbjct: 463 gtcggtgcacccgaacatgggcaacttccacatggtccagtatcggccatcgtagta 407
>emb| AJ419827.1 |CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit
Length = 2034
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 1838 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 1779
Query: 440 cagta 444
|||||
Sbjct: 1778 cagta 1774
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 1938 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 1879
>emb| X07367.1 |BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit
Length = 726
Score = 73.8 bits (37), Expect = 6e-10
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 429 gtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtagta 377
Score = 69.9 bits (35), Expect = 1e-08
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 277 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 336
|||||||||| |||||||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 559 tggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgat 500
Query: 337 gat 339
|||
Sbjct: 499 gat 497
>emb| X05037.1 |FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase
Length = 752
Score = 73.8 bits (37), Expect = 6e-10
Identities = 127/157 (80%)
Strand = Plus / Minus
Query: 288 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 347
|||| ||||| |||||||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 527 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 468
Query: 348 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 407
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 467 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggctgagtcgg 408
Query: 408 tgcatccgaacataggcagcttccacattgtccagta 444
|||||||||||||||||| ||||||||| ||||||||
Sbjct: 407 tgcatccgaacataggcaacttccacatcgtccagta 371
>gb| DQ300277.1 | Coffea arabica cultivar Rume Sudan plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300276.1 | Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300275.1 | Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300274.1 | Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300273.1 | Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300272.1 | Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300271.1 | Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300270.1 | Coffea arabica cultivar Mundo novo plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300269.1 | Coffea arabica cultivar Ethiopia 167 plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300268.1 | Coffea arabica cultivar Ethiopia 87 plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300267.1 | Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300266.1 | Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 380 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 439
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 440 cagta 444
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| J01308.1 |TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small
subunit mRNA
Length = 453
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 280 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 339
||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 249 tggcttgtaggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 190
Query: 340 gcgga 344
||||
Sbjct: 189 acgga 185
Score = 67.9 bits (34), Expect = 4e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 398 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 457
||||| || ||||||||||||||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 131 gtggcatcagtgcatccgaacataggtagcttccacatggtccagtatctgccatcatag 72
Query: 458 ta 459
||
Sbjct: 71 ta 70
>dbj| AB026685.1 | Physcomitrella patens mRNA for ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds
Length = 818
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 403 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 518 gtcggtgcacccgaacatgggcagcttccacatggtccagtagcgcccatcgtagta 462
>gb| AY705444.1 | Fagus sylvatica chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbcS) mRNA,
complete cds; nuclear gene for chloroplast product
Length = 562
Score = 71.9 bits (36), Expect = 3e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 391 cacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggcc 450
|||||||||||| ||||||||||| ||||| |||||||||||||| |||||| || ||
Sbjct: 427 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 368
Query: 451 atcgtagtaccc 462
||| ||||||||
Sbjct: 367 atcatagtaccc 356
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 293 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 344
||||| |||| ||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 525 atgaaactgatgcactgcacttgacgcttgttgtcgaatccgatgattcgga 474
>gb| AY023648.1 | Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to
marker S10704, genomic sequence
Length = 239
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 574 tgagtggtggcaagtaagacagggtctcgaacttcttgatgccctcgatgggccacacct 633
|||| ||||||| ||| || |||||||||||||||||||||||||| || ||||||||||
Sbjct: 232 tgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaatcggccacacct 173
Score = 44.1 bits (22), Expect = 0.58
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 630 acctgcatgcacctgatccttccaccgttgctga 663
|||||||||||||||||||| || || |||||||
Sbjct: 73 acctgcatgcacctgatcctgccgccattgctga 40
>gb| AF101233.1 |AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 780
Score = 71.9 bits (36), Expect = 3e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 462
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb| AF101232.1 |AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 793
Score = 71.9 bits (36), Expect = 3e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 462
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 451 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 396
>gb| AF101230.1 |AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 811
Score = 71.9 bits (36), Expect = 3e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 462
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb| U39857.1 |GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit precursor (rbcS) gene, nuclear gene
encoding chloroplast protein, complete cds
Length = 1069
Score = 71.9 bits (36), Expect = 3e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1055 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 996
Query: 341 cgga 344
||||
Sbjct: 995 cgga 992
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagg 465
||||| || |||| ||||||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 929 gtgcagccaaacacaggcagcttccacatggtccagtagcgtccatcatagtatccagg 871
>gb| U39856.1 |GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit
precursor (rbcS) gene, nuclear gene encoding chloroplast
protein, complete cds
Length = 1089
Score = 71.9 bits (36), Expect = 3e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1075 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 1016
Query: 341 cgga 344
||||
Sbjct: 1015 cgga 1012
Score = 60.0 bits (30), Expect = 1e-05
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 466
||||| || |||||||||||||||||||| |||||| | || ||||||||||| || ||
Sbjct: 949 gtgcaaccaaacataggcagcttccacatggtccagcagcgtccatcgtagtatcctggt 890
Query: 467 gatgcgttgtgctcacgg 484
|| |||||||||||||
Sbjct: 889 gacctgttgtgctcacgg 872
>emb| X17546.1 |EGRBCS Euglena gracilis rbcS mRNA for the small subunits of ribulose
1,5-bisphosphate carboxylase/oxygenase (EC 4.1.1.39)
Length = 4300
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3738 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3679
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2877 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2818
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2442 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2383
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2013 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1954
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 720 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 661
Score = 67.9 bits (34), Expect = 4e-08
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 399 tggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1142 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1093
Score = 63.9 bits (32), Expect = 6e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagta 444
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 3306 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 3251
Score = 63.9 bits (32), Expect = 6e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagta 444
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 1581 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1526
>emb| X79152.1 |EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19
Length = 4446
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3827 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3768
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3395 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3336
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2531 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2472
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2099 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2040
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1667 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1608
Score = 71.9 bits (36), Expect = 3e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 803 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 744
Score = 67.9 bits (34), Expect = 4e-08
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 399 tggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1225 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1176
Score = 63.9 bits (32), Expect = 6e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 389 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 448
|||||||| ||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 2963 agcacctggctggcgtccgtgcagccaaacatgggcagcttccacatggtccagtaccgg 2904
>gb| M16889.1 |SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4)
gene, complete cds
Length = 2185
Score = 71.9 bits (36), Expect = 3e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1726 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 1667
Query: 341 cgga 344
||||
Sbjct: 1666 cgga 1663
Score = 65.9 bits (33), Expect = 2e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||| || |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1600 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagta 1548
>gb| L10213.1 |CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit
gene, complete cds
Length = 3024
Score = 71.9 bits (36), Expect = 3e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||||||||| ||||| || ||||| ||||||| ||||||||||||||||||
Sbjct: 2647 ggcttgtaggcgatgaaactgacacattgcacttgacgcacgttgtcgaatccgatgata 2588
Query: 341 cgga 344
||||
Sbjct: 2587 cgga 2584
Score = 65.9 bits (33), Expect = 2e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 407 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 2521 gtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2469
>dbj| AB006080.1 | Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate
carboxylase/oxygenase, complete cds
Length = 789
Score = 71.9 bits (36), Expect = 3e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 391 cacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggcc 450
|||||||||||| ||||||||||| ||||| |||||||||||||| |||||| || ||
Sbjct: 463 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 404
Query: 451 atcgtagtaccc 462
||| ||||||||
Sbjct: 403 atcatagtaccc 392
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 293 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 344
||||| |||| ||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 561 atgaaactgatgcactgcacttgacgcttgttgtcgaatccgatgattcgga 510
>ref| NM_123203.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420
mRNA, complete cds
Length = 837
Score = 69.9 bits (35), Expect = 1e-08
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 575 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 516
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 515 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 456
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 455 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 397
>gb| BT012936.1 | Lycopersicon esculentum clone 114099R, mRNA sequence
Length = 1261
Score = 69.9 bits (35), Expect = 1e-08
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 281 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 340
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 1116 ggcttgtaagcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgata 1057
Query: 341 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 400
||||| | || | ||||| ||||||| |||||| |||||| | ||||| ||
Sbjct: 1056 cggacccatgcctgtgggtaagccttctttgcctcctgcacctcagccaagacctgggtt 997
Query: 401 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 459
|| || ||||| |||||||| |||| ||||||||| |||||||| | ||||||||||||
Sbjct: 996 gcatcagtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 938
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 624 ggccacacctgcatgcacctgatccttccaccgttgct 661
||||||||||||||||| |||| ||||||||||||||
Sbjct: 771 ggccacacctgcatgcaactgactcttccaccgttgct 734
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,860,020
Number of Sequences: 3902068
Number of extensions: 5860020
Number of successful extensions: 126020
Number of sequences better than 10.0: 460
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124543
Number of HSP's gapped (non-prelim): 1325
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)