Clone Name | rbah61g10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence Length = 227679 Score = 38.2 bits (19), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 126 atttgcacagnaaatttccaaa 147 |||||||||| ||||||||||| Sbjct: 153935 atttgcacagtaaatttccaaa 153956
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 cacattctttacatacatt 62 ||||||||||||||||||| Sbjct: 130032 cacattctttacatacatt 130050
>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence Length = 268826 Score = 38.2 bits (19), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 126 atttgcacagnaaatttccaaa 147 |||||||||| ||||||||||| Sbjct: 235386 atttgcacagtaaatttccaaa 235407
>gb|AC125352.4| Mus musculus BAC clone RP23-451M13 from chromosome 8, complete sequence Length = 203416 Score = 38.2 bits (19), Expect = 8.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 131 cacagnaaatttccaaaaaaca 152 ||||| |||||||||||||||| Sbjct: 124778 cacaggaaatttccaaaaaaca 124799
>gb|AC027644.9| Homo sapiens BAC clone RP11-792A8 from 7, complete sequence Length = 188207 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 138 aatttccaaaaaacacagg 156 ||||||||||||||||||| Sbjct: 10921 aatttccaaaaaacacagg 10939
>emb|BX571977.7| Zebrafish DNA sequence from clone DKEY-9E15, complete sequence Length = 82992 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 137 aaatttccaaaaaacacag 155 ||||||||||||||||||| Sbjct: 52163 aaatttccaaaaaacacag 52145
>gb|AC145858.5| Pan troglodytes BAC clone RP43-6D19 from chromosome 7, complete sequence Length = 196528 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 138 aatttccaaaaaacacagg 156 ||||||||||||||||||| Sbjct: 24237 aatttccaaaaaacacagg 24255
>emb|AL807741.8| Mouse DNA sequence from clone RP23-224B9 on chromosome 2, complete sequence Length = 165777 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 116 gaagaagcatatttgcaca 134 ||||||||||||||||||| Sbjct: 125555 gaagaagcatatttgcaca 125573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 837,743 Number of Sequences: 3902068 Number of extensions: 837743 Number of successful extensions: 55680 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55668 Number of HSP's gapped (non-prelim): 12 length of query: 172 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 150 effective length of database: 17,147,199,772 effective search space: 2572079965800 effective search space used: 2572079965800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)