ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early de... 38 0.021
2CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity fa... 37 0.027
3FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (... 37 0.027
4CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity fa... 32 0.13
5WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7... 35 0.14
6CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa... 33 0.52
7CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa... 32 1.1
8CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa... 32 1.1
9E2F2_HUMAN (Q14209) Transcription factor E2F2 (E2F-2) 32 1.1
10CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa... 32 1.1
11HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E) 31 2.0
12KCNH4_RAT (Q9R1T9) Potassium voltage-gated channel subfamily H m... 31 2.6
13SOX9_MOUSE (Q04887) Transcription factor SOX-9 31 2.6
14PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early de... 31 2.6
15PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.1... 31 2.6
16MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3... 31 2.6
17DAC_STRSR (P15555) D-alanyl-D-alanine carboxypeptidase precursor... 30 3.3
18VGLB_HHV2H (P08666) Glycoprotein B precursor 30 3.3
19VGLB_HHV23 (P06763) Glycoprotein B precursor 30 3.3
20GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge... 30 3.3
21RNB_HHV2H (P89479) Probable RNA-binding protein 30 3.3
22SECD_MYCTU (Q50634) Protein-export membrane protein secD 30 3.3
23NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 30 3.3
24APP1_SCHPO (Q9P7E8) Protein app1 30 3.3
25BSN_MOUSE (O88737) Bassoon protein 30 4.4
26TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kina... 30 4.4
27GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3) 30 4.4
28TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA ... 30 4.4
29TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA ... 30 4.4
30NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytopl... 30 4.4
31MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4... 30 5.7
32SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich... 30 5.7
33PROP1_BOVIN (Q8MJI9) Homeobox protein prophet of Pit-1 (PROP-1) ... 30 5.7
34CB027_HUMAN (Q580R0) Protein C2orf27 30 5.7
35SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chroma... 24 6.8
36RECF_DEIRA (Q9RVE0) DNA replication and repair protein recF 29 7.5
37SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi... 29 7.5
38WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem... 29 7.5
39PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakar... 29 7.5
40PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allel... 29 7.5
41IL3RB_HUMAN (P32927) Cytokine receptor common beta chain precurs... 29 7.5
42RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/in... 29 9.7
43RGF1_SCHPO (Q9Y7U6) Rho1 guanine nucleotide exchange factor 1 29 9.7
44EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homol... 29 9.7
45RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif p... 29 9.7
46RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif p... 29 9.7
47ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I... 29 9.7
48PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allel... 29 9.7
49AMEL_ORNAN (O97646) Amelogenin (Fragment) 29 9.7
50G3PT_HUMAN (O14556) Glyceraldehyde-3-phosphate dehydrogenase, te... 29 9.7
51RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif p... 29 9.7
52MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (... 29 9.7
53POGZ_MOUSE (Q8BZH4) Pogo transposable element with ZNF domain 29 9.7

>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development|
           regulatory protein 1)
          Length = 1004

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
 Frame = -2

Query: 368 QQELPQAPWL--PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAP----- 210
           QQ+ PQA  L  P+   +PP + V PS+ +    T   +P L   P   P   AP     
Sbjct: 436 QQQQPQATTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAAPKPPIP 495

Query: 209 -PSGPTHPQVAPPHMQLVSLATAQRXP 132
             S P    + PP +    ++ AQ+ P
Sbjct: 496 IQSKPPVAPIKPPQLGAAKMSAAQQPP 522



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>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6|
          Length = 548

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTG-APPSGPTHPQVA 180
           P  P  P     PP  V+ P +P       +G+P +  LP   P  G  PP GP  PQ  
Sbjct: 262 PPLPGPPNRGERPPPPVMFPGQP-------YGQPSIVTLPPGPPPPGYGPPPGPPPPQQG 314

Query: 179 PP 174
           PP
Sbjct: 315 PP 316



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>FYB_MOUSE (O35601) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)|
           (p120/p130) (SLP-76-associated phosphoprotein)
           (SLAP-130)
          Length = 819

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
 Frame = -2

Query: 338 PEEQALPPMEVVCP-----SRPKAATLTRFGRP------RLDVLPYRAPMTGAPPSGPTH 192
           P+++ALPP+ V+ P     +RP    LTRF +            PY    T  PP  PTH
Sbjct: 330 PKQKALPPLSVLGPPPPKPNRPPNVDLTRFRKADSANSATKSQTPYST--TSLPPPPPTH 387

Query: 191 PQVAPP 174
           P   PP
Sbjct: 388 PASQPP 393



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>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 32.0 bits (71), Expect(2) = 0.13
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 338 PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAP--MTG-APPSGPTHPQVAPP 174
           P     PP  V+ P +P       FG+P L  LP   P  + G  PP GP  PQ  PP
Sbjct: 267 PNRGDRPPPPVLFPGQP-------FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317



 Score = 21.9 bits (45), Expect(2) = 0.13
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 511 PQARTSLDRSPPMTTLSRPGP 449
           P  R+ LD+ P    L  PGP
Sbjct: 226 PPHRSQLDKLPTRPPLGPPGP 246



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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein|
            kinase with no lysine 2) (Protein kinase,
            lysine-deficient 2)
          Length = 2297

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
 Frame = -2

Query: 368  QQELPQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSG--PT 195
            Q  LP  P LP +  LPP   + P        TR  +P L   P   P    PP    P 
Sbjct: 941  QPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPV 1000

Query: 194  HPQVAPPHM 168
             P+   PH+
Sbjct: 1001 RPEPLQPHL 1009



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>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
 Frame = -2

Query: 338 PEEQALPPMEVVCPSR-----PKAATLTRFGRPRLDVLPYRAPMTG-APPSGPTHPQVAP 177
           P  Q LPP     P+R     P      +FG+P +  +P   P  G  PP GP  PQ  P
Sbjct: 254 PPGQGLPPPLGGPPNRGDRPPPPVLFPGQFGQPPMGPMPPGPPPPGYGPPPGPPPPQQGP 313

Query: 176 P 174
           P
Sbjct: 314 P 314



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>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 338 PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAP--MTG-APPSGPTHPQVAPP 174
           P     PP  V+ P +P       FG+P L  LP   P  + G  PP GP  PQ  PP
Sbjct: 267 PNRGDRPPPPVLFPGQP-------FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317



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>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 338 PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAP--MTG-APPSGPTHPQVAPP 174
           P     PP  V+ P +P       FG+P L  LP   P  + G  PP GP  PQ  PP
Sbjct: 267 PNRGDRPPPPVLFPGQP-------FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317



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>E2F2_HUMAN (Q14209) Transcription factor E2F2 (E2F-2)|
          Length = 437

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 14/93 (15%)
 Frame = -2

Query: 353 QAPWLPEEQALPPMEVVCPS----RPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQ 186
           Q P  P E+ LP    +CPS    +P ++T      P    +P  AP    P   P  P 
Sbjct: 308 QEPDSPSEEPLPSTSTLCPSPDSAQPSSSTDPSIMEPTASSVPAPAP---TPQQAPPPPS 364

Query: 185 VAP----------PHMQLVSLATAQRXPSLFCT 117
           + P          PH  L         P+L C+
Sbjct: 365 LVPLEATDSLLELPHPLLQQTEDQFLSPTLACS 397



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>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 338 PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAP--MTG-APPSGPTHPQVAPP 174
           P     PP  V+ P +P       FG+P L  LP   P  + G  PP GP  PQ  PP
Sbjct: 267 PNRGDRPPPPVLFPGQP-------FGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP 317



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>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)|
          Length = 443

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = -2

Query: 290 PKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQ 165
           PKA  L+      L   P + P  G PP  P  PQ APP  Q
Sbjct: 62  PKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAPQ 103



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>KCNH4_RAT (Q9R1T9) Potassium voltage-gated channel subfamily H member 4|
           (Voltage-gated potassium channel subunit Kv12.3)
           (Ether-a-go-go-like potassium channel 1) (ELK channel 1)
           (rElk1) (Brain-specific eag-like channel 2) (BEC2)
          Length = 1017

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -1

Query: 360 TPTSTMAARGTSPAAHGGRLSKPPQGR---NPDQIWTP 256
           TP+  +A RG+SP+ HG     PP+G     P Q+ TP
Sbjct: 780 TPSPALAGRGSSPSLHG-----PPRGSAAWKPPQLLTP 812



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>SOX9_MOUSE (Q04887) Transcription factor SOX-9|
          Length = 507

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 362 ELPQAPWLPEEQALPPMEVVCPSRPKAATLT 270
           + PQAP  P +Q  PP +   P + +A TLT
Sbjct: 351 QAPQAPQAPPQQQAPPQQPQAPQQQQAHTLT 381



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>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development|
           regulatory protein 1) (RAE-28)
          Length = 1012

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
 Frame = -2

Query: 368 QQELPQAPWL--PEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAP--MTGAPP-- 207
           QQ+  Q   L  P+   +PP + V PS+ +    T   +P L   P   P   T  PP  
Sbjct: 443 QQQQQQGTTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLTLPPEPTSKPPIP 502

Query: 206 --SGPTHPQVAPPHMQLVSLATAQRXP 132
             S P    + PP +    ++  Q+ P
Sbjct: 503 IQSKPPVAPIKPPQLGAAKMSATQQPP 529



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>PKN3_HUMAN (Q6P5Z2) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 889

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = -2

Query: 359 LPQAPWLPEEQALPPM--EVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQ 186
           LP+   L EE   PP    +  P  P +    R  RP ++      P T   PS P  P 
Sbjct: 497 LPKKTPLGEEMTPPPKPPRLYLPQEPTSEETPRTKRPHME------PRTRRGPSPPASPT 550

Query: 185 VAPPHMQ 165
             PP +Q
Sbjct: 551 RKPPRLQ 557



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>MMP21_HUMAN (Q8N119) Matrix metalloproteinase-21 precursor (EC 3.4.24.-)|
           (MMP-21)
          Length = 569

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = -2

Query: 284 AATLTRFGRPRLDVLPYRAPMTGAPPSGPTHP 189
           AATL    RPR  V   R P   APPS P  P
Sbjct: 106 AATLAAMNRPRCGVPDMRPPPPSAPPSPPGPP 137



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>DAC_STRSR (P15555) D-alanyl-D-alanine carboxypeptidase precursor (EC|
           3.4.16.4) (DD-peptidase) (DD-carboxypeptidase)
          Length = 406

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 99  MTLTEPGAKQRWXSLCRG*GYELHVRRRNLRMGRA*WWSPGHGGAV-GQHVKARASKSGQ 275
           M+  +    Q+W ++    GY L +RRR+L  G + +   GH G V G +  A ASK G+
Sbjct: 291 MSAAQLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVY---GHTGTVQGYYTYAFASKDGK 347



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>VGLB_HHV2H (P08666) Glycoprotein B precursor|
          Length = 904

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -1

Query: 375 SLSAGTPTSTMAARGTSP--AAHGGRLSKPPQGRNPDQIWTPSP*RAALPRPHDRGSTIR 202
           S +   P +  A+ G +   AA+GG  S+PP   +P    T +  R     P    +T  
Sbjct: 21  SAAPAAPAAPRASGGVAATVAANGGPASRPPPVPSPAT--TKARKRKTKKPPKRPEATPP 78

Query: 201 PDPSSSCAAAHAT 163
           PD +++ AA HAT
Sbjct: 79  PDANATVAAGHAT 91



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>VGLB_HHV23 (P06763) Glycoprotein B precursor|
          Length = 904

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -1

Query: 375 SLSAGTPTSTMAARGTSP--AAHGGRLSKPPQGRNPDQIWTPSP*RAALPRPHDRGSTIR 202
           S +   P +  A+ G +   AA+GG  S+PP   +P    T +  R     P    +T  
Sbjct: 21  SAAPAAPAAPRASGGVAATVAANGGPASRPPPVPSPAT--TKARKRKTKKPPKRPEATPP 78

Query: 201 PDPSSSCAAAHAT 163
           PD +++ AA HAT
Sbjct: 79  PDANATVAAGHAT 91



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>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = -2

Query: 347 PWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAP--PS-GPTHPQVAP 177
           P  P+ QA P      P  P AA L   G      LP++AP+  +P  PS  PT P   P
Sbjct: 696 PQAPDSQASP---APAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRP 752

Query: 176 P 174
           P
Sbjct: 753 P 753



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>RNB_HHV2H (P89479) Probable RNA-binding protein|
          Length = 151

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 359 LPQAPWLPEEQALP--PMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGP 198
           +P+AP +P E  +P  P E   P  P+   + R  R      P R P    PP  P
Sbjct: 89  IPRAPRVPREPRVPREPREPRVPRSPREPRVPRIPRDPRPPRPPRVPREPRPPREP 144



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>SECD_MYCTU (Q50634) Protein-export membrane protein secD|
          Length = 573

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
 Frame = -2

Query: 359 LPQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRP---RLDVLPYRAPMTGAPPSGPTHP 189
           +P  P   E Q  P  E   P +P A    + G P   +    P   P   AP   PT P
Sbjct: 125 MPAQPAAEEPQPAPSAEPQPPGQPAAPPPAQSGAPASPQPGAQPRPYPQDPAPSPNPTSP 184

Query: 188 QVAPPHMQLVSLATAQR 138
              PP     + AT  R
Sbjct: 185 ASPPPAPPAEAPATDPR 201



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
 Frame = -1

Query: 357 PTSTMAARGTSPAAHGGRLS-----KPPQGRNPDQIWTPSP*RAALPRPHDRGSTIRPDP 193
           P S    R ++P  H  R S      P    +P    +PSP    +P P  R S   P P
Sbjct: 139 PPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKR-SPASPSP 197

Query: 192 SSSCAAAHA-TRIPSHGTEKXIFVLHLVQSTSSYDTS 85
           S S + + + +  PS        V  L  S+S  D S
Sbjct: 198 SPSLSKSPSPSESPSLAPSPSDSVASLAPSSSPSDES 234



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>APP1_SCHPO (Q9P7E8) Protein app1|
          Length = 857

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = -2

Query: 359 LPQAPWLPEEQALP--------PMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPS 204
           +P+AP +P+  A+P        P   V P  P+  ++ +   P   V+P  AP    PP 
Sbjct: 553 VPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQ--PPVAPVVP-EAPSVPQPPV 609

Query: 203 GPTHPQVAPPHMQLVSLATAQRXPSL 126
            P  P+V P   Q  ++      PS+
Sbjct: 610 APVAPEV-PSVPQRPAVPVVPEAPSV 634



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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
 Frame = -1

Query: 366 AGTPTSTMAARGTSPAAHGGRLSKPP-QGRNPDQIWTPSP*RAALPR------PHDRGST 208
           AG P S +A  G  P A   R + PP  G  P     P P   ++PR      P     T
Sbjct: 28  AGKPPSALAGGGQLPVAGAARAAGPPTPGLGPVPGPGPGPGPGSVPRRLDPKEPLGSQRT 87

Query: 207 IRPDPSSSCAAAHATRIP 154
             P P  + A A     P
Sbjct: 88  TSPTPKQASATAPGRESP 105



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>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 homolog
          Length = 692

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -2

Query: 368 QQELPQAPWLPEEQALPPMEVVCPSRPKAATLTRFG--RPRLDVLPYRAPMTGAPPSGPT 195
           +Q      W P  QA+ P    CP  P++   T++   +P++    +R+P    P S  T
Sbjct: 222 RQTQQNTAWPPSPQAVLPHYNPCPPYPQSFQPTQYSPKQPQIPQSAFRSP----PTSQCT 277

Query: 194 HPQVAPPH 171
            P  +P H
Sbjct: 278 SPYSSPQH 285



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>GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)|
          Length = 780

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/88 (28%), Positives = 32/88 (36%)
 Frame = -2

Query: 332 EQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQLVSL 153
           +  LP  +    +  K   L  F    LD LP   P+   PP GP  P  A PH+    L
Sbjct: 260 QPGLPGQDGQTANMLKTERLEEFPASALD-LPSALPLPLPPPQGPPPPYHAHPHLHHPEL 318

Query: 152 ATAQRXPSLFCTWFSQRHRMIHLGKIPC 69
               +  SL  T   +   M   G   C
Sbjct: 319 LPHTQSLSLAQTGLEEDGEMEDSGGKHC 346



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>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150) (p144) (Formin-binding protein 28) (FBP 28)
          Length = 1100

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 266 FGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQ 165
           FGRP  D  P   PM   PP G   P + PPH+Q
Sbjct: 67  FGRPPFD--PNMPPM---PPPGGIPPPMGPPHLQ 95



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>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 266 FGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQ 165
           FGRP  D  P   PM   PP G   P + PPH+Q
Sbjct: 67  FGRPPFD--PNMPPM---PPPGGIPPPMGPPHLQ 95



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>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)|
            (NFATc3) (T cell transcription factor NFAT4) (NF-AT4)
            (NFATx)
          Length = 1075

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 22/68 (32%), Positives = 28/68 (41%)
 Frame = -2

Query: 302  CPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQLVSLATAQRXPSLF 123
            CPS P +AT                P+  +P SGP+ PQ+ P   Q  S  TA   PS  
Sbjct: 915  CPSHPGSATAASPAASH--------PLASSPISGPSSPQLQPMPYQSPSSGTAS-SPSPT 965

Query: 122  CTWFSQRH 99
                S +H
Sbjct: 966  TRMHSGQH 973



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>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)|
           (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase)
           (Gelatinase B) (GELB)
          Length = 707

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 22/61 (36%), Positives = 25/61 (40%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAP 177
           P A   PE Q   P    CP+ P           R    P  +P TGAP +GPT P  A 
Sbjct: 451 PPATTTPEPQPTAP-PTACPTWPATV--------RPSEHPTTSP-TGAPSAGPTGPPTAS 500

Query: 176 P 174
           P
Sbjct: 501 P 501



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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -2

Query: 368 QQELPQAPWLPEEQALPPMEVVCPSRPK----AATLTRFGRPRLDVLPYRAPMTGAPPSG 201
           QQ  P  P  P +Q  PP +   P  P+    A  ++    P +   P   P TGAPP G
Sbjct: 84  QQPPPHQP--PHQQPPPPPQESKPVVPQGPGSAPGVSSAPPPAVSAPPANPPTTGAPP-G 140

Query: 200 PTHPQVAPP 174
           P      PP
Sbjct: 141 PGPTPTPPP 149



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>PROP1_BOVIN (Q8MJI9) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/50 (36%), Positives = 22/50 (44%)
 Frame = -1

Query: 327 SPAAHGGRLSKPPQGRNPDQIWTPSP*RAALPRPHDRGSTIRPDPSSSCA 178
           SPA   G L +PP    P    TP P     P P++R    +P   SS A
Sbjct: 139 SPATFSGFLPEPPSC--PYSYPTPPPPMTCFPHPYNRALPSQPSTGSSFA 186



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>CB027_HUMAN (Q580R0) Protein C2orf27|
          Length = 203

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 149 WLGIRVACAAAQLEDGSGLMVEPRSWGRGRAARQGEGVQIWSGLRPWGG 295
           WL + VA    Q      L    +SW + +  RQ  G  IW+ L  W G
Sbjct: 85  WLELEVAERGGQHSSSQQLPHCSQSWAQWKLWRQRPGFAIWAPLPHWRG 133



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>SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chromatin elongation|
           factor SPT5)
          Length = 1063

 Score = 24.3 bits (51), Expect(2) = 6.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 133 GFLCAVARDTSCMCGGAT*GWVGPDGG 213
           G     A  +S + GG T GW   DGG
Sbjct: 888 GIAAGAAATSSGLSGGMTPGWSSFDGG 914



 Score = 23.5 bits (49), Expect(2) = 6.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +2

Query: 251 GEGVQIWSGLRPWGG 295
           G GV  W G   WGG
Sbjct: 927 GGGVSSWGGASTWGG 941



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>RECF_DEIRA (Q9RVE0) DNA replication and repair protein recF|
          Length = 359

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +2

Query: 167 ACAAAQLEDGSGLMVEPRSWGRGRAARQGEGVQIWSGLRPWGGLDKRPPWAAGLVPRAAM 346
           A   A L+ G  L ++    GRGR   + +GV+  +G  P GG       A  + P  + 
Sbjct: 70  AYVRADLQQGGSLSIQEVGLGRGRRQLKVDGVRARTGDLPRGG-------AVWIRPEDSE 122

Query: 347 VLVGVPAER 373
           ++ G P+ R
Sbjct: 123 LVFGPPSGR 131



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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
            SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
            complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
 Frame = -2

Query: 359  LPQAPWLPEEQALP---PMEVVCPSRPKAATLTRFGRPRLDVLPYR--APMTGAPPSGPT 195
            LP A   P E  +P   P+EV  P R   + +T    P  +  P R   P   +PPS P 
Sbjct: 1074 LPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPL--PEQEASPARPAGPTEESPPSAPL 1131

Query: 194  HPQVAP 177
             P   P
Sbjct: 1132 RPPEPP 1137



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>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 22/61 (36%), Positives = 23/61 (37%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAP 177
           P  P  P+  A PP     P  P AA       P L   P   P  GAPP  P  P   P
Sbjct: 353 PSFPPHPDFAAPPP-----PPPPPAADY-----PTLPPPPLSQPTGGAPPPPPPPPPPGP 402

Query: 176 P 174
           P
Sbjct: 403 P 403



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>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
            stimulating factor) (Superficial zone proteoglycan)
            [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
 Frame = -2

Query: 350  APWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPS-------GPTH 192
            AP  P++ A  P E+  P+  K  T T   +P        AP T   P+        PT 
Sbjct: 790  APTTPKKPA--PKELA-PTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTT 846

Query: 191  PQVAPPHMQLVSLATAQRXPS 129
            P+  PP    VS  T  + P+
Sbjct: 847  PETPPPTTSEVSTPTTTKEPT 867



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>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor|
           (Salivary proline-rich protein Po) (Parotid o protein)
           [Contains: Protein N1; Glycosylated protein A]
          Length = 247

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -1

Query: 324 PAAHGGRLSKPP-QGRNPDQIWTPSP*RAALPRPHDRGSTIRPDP 193
           P  H G+  +PP QG N  Q   P P +   P P     + RP P
Sbjct: 92  PPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPP 136



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>IL3RB_HUMAN (P32927) Cytokine receptor common beta chain precursor|
           (GM-CSF/IL-3/IL-5 receptor common beta-chain) (CD131
           antigen) (CDw131)
          Length = 897

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 357 PTSTMAARGTSPAAHGGRLSKPPQGRNPDQIWTPSP*RAALPR 229
           P+ST  AR  +  A G RLS  P   +P+  W   P   A P+
Sbjct: 204 PSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQ 246



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>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -2

Query: 299 PSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAPP 174
           P+ P A + T  G PR    P   P+   PP GP  P +APP
Sbjct: 259 PATPDATSPTSKGSPRRPPPP--PPLPTVPPIGPARP-LAPP 297



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>RGF1_SCHPO (Q9Y7U6) Rho1 guanine nucleotide exchange factor 1|
          Length = 1334

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -2

Query: 242 LPYRA----PMTGAPPSGPTHPQVAPPHMQLVSLATAQRXPSLFCTWFSQRHRMIHL 84
           LP+R+    P +  PP+ PTH + A P   + ++  ++  PS+F T  S  H+++ L
Sbjct: 62  LPFRSTSLQPPSSQPPAPPTHQREASP---VKNIEHSESFPSVFGT--SNNHQIVPL 113



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>EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty|
           spiracles-like protein 2)
          Length = 253

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
 Frame = -2

Query: 209 PSGPTHPQVAPPHM----QLVSL-------ATAQRXPSLFCTWFSQRHRMI 90
           P+ P HP V PPH      L SL       A+ QR PS F  W   R+R +
Sbjct: 82  PAVPVHP-VPPPHALAAHPLPSLHSPHPLFASQQRDPSTFYPWLIHRYRYL 131



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>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVV--CPSRPKAATLTRFGR-PRLDVLPYRAPMTGAPPSGPTHPQ 186
           P  P +P   +LPPM  +   P  P   TL      P +  +P   PMT  PP     P 
Sbjct: 188 PPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPL 247

Query: 185 VAPP 174
             PP
Sbjct: 248 NPPP 251



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>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVV--CPSRPKAATLTRFGR-PRLDVLPYRAPMTGAPPSGPTHPQ 186
           P  P +P   +LPPM  +   P  P   TL      P +  +P   PMT  PP     P 
Sbjct: 188 PPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPL 247

Query: 185 VAPP 174
             PP
Sbjct: 248 NPPP 251



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>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 24/75 (32%), Positives = 29/75 (38%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAP 177
           P +P  P    +P      P  P +A  +   RPR  V    AP   APP GP     AP
Sbjct: 369 PASPHRPPAAPMPG-SAPRPGPPASAAASGPARPRAAV----APCVRAPPPGPGPRAPAP 423

Query: 176 PHMQLVSLATAQRXP 132
                   A A+R P
Sbjct: 424 GAEPAARPADARRVP 438



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>PRB4L_HUMAN (P10162) Basic salivary proline-rich protein 4 allele L (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 276

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = -1

Query: 357 PTSTMAARGTSPAAHGGRLSKPPQGRNPDQIWTPSP*RAALPRPHDRGSTIRPDP 193
           P     ++GT P   G    +PPQG N  Q   P P +   P P     + RP P
Sbjct: 112 PQGGNQSQGTPPPP-GKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSHRPPP 165



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>AMEL_ORNAN (O97646) Amelogenin (Fragment)|
          Length = 121

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
 Frame = -2

Query: 368 QQELPQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHP 189
           QQ+ P     P    +P M    P +P+   +   G+P +    +       P   P  P
Sbjct: 11  QQQTPTHALQPHHH-IPVMAAQQPMQPQQPMMPMPGQPSVTPTQHHQSNLPQPAQQPFQP 69

Query: 188 QV--APPHMQLVSLATAQRXPSL 126
           QV   PPH  +   A A   P +
Sbjct: 70  QVPQQPPHQPIQPQAPAHPMPPM 92



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>G3PT_HUMAN (O14556) Glyceraldehyde-3-phosphate dehydrogenase, testis-specific|
           (EC 1.2.1.12) (Spermatogenic cell-specific
           glyceraldehyde 3-phosphate dehydrogenase 2) (GAPDH-2)
          Length = 408

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/58 (31%), Positives = 23/58 (39%)
 Frame = -2

Query: 329 QALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAPPHMQLVS 156
           Q  P      P  PKA    +   P+ +  P R  +   PP  P HP   PP M  V+
Sbjct: 19  QPCPVTRAPPPPEPKAEVEPQ---PQPEPTPVREEIKPPPPPLPPHPATPPPKMVSVA 73



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>RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 1002

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 22/60 (36%), Positives = 25/60 (41%)
 Frame = -2

Query: 356 PQAPWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQVAP 177
           P  P LP    +PP+  V PS P   TL               PM+G PP  P  P VAP
Sbjct: 212 PPVPTLPPVPPVPPIPPV-PSVPPMTTL--------------PPMSGMPPLNP--PPVAP 254



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>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 11/83 (13%)
 Frame = -1

Query: 357 PTSTMAARGTSPAAHGGRLSKPPQGRNP-----------DQIWTPSP*RAALPRPHDRGS 211
           P++T +  GT P    G   +PP    P            Q  TP    A  P+P   G+
Sbjct: 491 PSTTSSGGGTGPHPPSGTTLRPPTSSTPGGSPGAENSTSHQPATPGGDTAQTPKP---GT 547

Query: 210 TIRPDPSSSCAAAHATRIPSHGT 142
           +    P    + +H    PS GT
Sbjct: 548 SQPMPPGVGTSTSHQPATPSGGT 570



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>POGZ_MOUSE (Q8BZH4) Pogo transposable element with ZNF domain|
          Length = 1409

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -2

Query: 347  PWLPEEQALPPMEVVCPSRPKAATLTRFGRPRLDVLPYRAPMTGAPPSGPTHPQ 186
            P +P + A      V P+ P+         P L  LP  A  T  PP+ PTHPQ
Sbjct: 874  PLVPNKAATVKPVGVTPAEPQ-----ELAGPVLQALPSPAS-TATPPATPTHPQ 921


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,042,549
Number of Sequences: 219361
Number of extensions: 1658293
Number of successful extensions: 6217
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6121
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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