Clone Name | rbah61g09 |
---|---|
Clone Library Name | barley_pub |
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 482 cgaccggtccaacgaggtgcgggc 505 |||||||||||||||||||||||| Sbjct: 4576707 cgaccggtccaacgaggtgcgggc 4576684
>gb|AC165230.12| Mus musculus chromosome 1, clone RP23-65C14, complete sequence Length = 174156 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agcagaacaaagatggcttt 45 |||||||||||||||||||| Sbjct: 14009 agcagaacaaagatggcttt 14028
>gb|AC121892.3| Mus musculus BAC clone RP24-155I11 from chromosome 1, complete sequence Length = 152888 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agcagaacaaagatggcttt 45 |||||||||||||||||||| Sbjct: 109109 agcagaacaaagatggcttt 109128
>gb|AC125191.4| Mus musculus BAC clone RP23-262C22 from 16, complete sequence Length = 196580 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 attttccctagatgtatcat 95 |||||||||||||||||||| Sbjct: 97163 attttccctagatgtatcat 97182
>gb|AC140027.11| Medicago truncatula clone mth2-5m21, complete sequence Length = 131365 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gatgtaactattgataaaac 70 |||||||||||||||||||| Sbjct: 60063 gatgtaactattgataaaac 60082
>emb|AL031313.1|HS581F12 Human DNA sequence from clone RP4-581F12 on chromosome Xq21 Contains an eukaryotic translation initiation factor 3, subunit 1 alpha, 35kDa (EIF3S1) pseudogene and a ribosomal protein L22 (RPL22) pseudogene, complete sequence Length = 166949 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tttgttaaacagcagaacaa 35 |||||||||||||||||||| Sbjct: 164717 tttgttaaacagcagaacaa 164698
>emb|BX323855.5| Zebrafish DNA sequence from clone CH211-134O20 in linkage group 7, complete sequence Length = 124192 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 ctagatgtaactattgataaaaca 71 |||||||| ||||||||||||||| Sbjct: 79313 ctagatgtcactattgataaaaca 79290
>dbj|AK140508.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930015K11 product:hypothetical protein, full insert sequence Length = 758 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 attttccctagatgtatcat 95 |||||||||||||||||||| Sbjct: 437 attttccctagatgtatcat 418
>emb|AL672042.8| Mouse DNA sequence from clone RP23-91P22 on chromosome X, complete sequence Length = 198740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tctctagatgtaactattga 64 |||||||||||||||||||| Sbjct: 61039 tctctagatgtaactattga 61058 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,696,267 Number of Sequences: 3902068 Number of extensions: 3696267 Number of successful extensions: 66179 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66138 Number of HSP's gapped (non-prelim): 41 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)