Clone Name | rbah61g05 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C12, full insert sequence Length = 2803 Score = 381 bits (192), Expect = e-102 Identities = 360/416 (86%) Strand = Plus / Minus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttcccgctcagg 332 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| || || Sbjct: 2463 tgcgaggcccacttgctggccatagctgtgctcatcatctcatacatcttcccacttagc 2404 Query: 333 tcagttgggttatcaggtgtaaagccgctagaaatcattgaagtttcaaagaggatgtcg 392 || | ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 2403 tcggcagggttgtcaggtgtaaagccactagagatcatagaagtttcaaacaggatatct 2344 Query: 393 attgccttcagagcttccgggtcatcagggttgcttctgcacgcagaattcagtcgcttg 452 | ||||| |||||||| ||||||||||||||| |||||| |||| ||||| | |||| Sbjct: 2343 acagcctttagagcttctgggtcatcagggttggctctgcaggcagcattcaagcccttg 2284 Query: 453 attatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccagagac 512 || |||||||||||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 2283 atgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccagagat 2224 Query: 513 gacgtatcacctatagactgcgccctcattaacctttccatattggctgaccaaccaaac 572 ||| | ||||| ||||| ||||| ||||| ||||||||||| || || |||||||||||| Sbjct: 2223 gacatgtcacccatagattgcgctctcatcaacctttccatgttcgcagaccaaccaaac 2164 Query: 573 ttggctgcaactagaacacatggtgatgagctgagacggttggagacatcaactcgagca 632 || |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| Sbjct: 2163 ttagctgcaactagaacacatggtgatgagctgagacggtttgatatatcaactcgagca 2104 Query: 633 accctctcacccaaacgtttcttgatccaatcacaggtttgactgtattcctgctt 688 ||| | |||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 2103 accttttcacccaagcgtttcttgatccagtcacatgtttggctgtattcctgctt 2048
>dbj|AK067032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088H23, full insert sequence Length = 1894 Score = 381 bits (192), Expect = e-102 Identities = 360/416 (86%) Strand = Plus / Minus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttcccgctcagg 332 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| || || Sbjct: 1534 tgcgaggcccacttgctggccatagctgtgctcatcatctcatatatcttcccacttagc 1475 Query: 333 tcagttgggttatcaggtgtaaagccgctagaaatcattgaagtttcaaagaggatgtcg 392 || | ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 1474 tcggcagggttgtcaggtgtaaagccactagagatcatagaagtttcaaacaggatatct 1415 Query: 393 attgccttcagagcttccgggtcatcagggttgcttctgcacgcagaattcagtcgcttg 452 | ||||| |||||||| ||||||||||||||| |||||| |||| ||||| | |||| Sbjct: 1414 acagcctttagagcttctgggtcatcagggttggctctgcaggcagcattcaagcccttg 1355 Query: 453 attatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccagagac 512 || |||||||||||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 1354 atgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccagagat 1295 Query: 513 gacgtatcacctatagactgcgccctcattaacctttccatattggctgaccaaccaaac 572 ||| | ||||| ||||| ||||| ||||| ||||||||||| || || |||||||||||| Sbjct: 1294 gacatgtcacccatagattgcgctctcatcaacctttccatgttcgcagaccaaccaaac 1235 Query: 573 ttggctgcaactagaacacatggtgatgagctgagacggttggagacatcaactcgagca 632 || |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| Sbjct: 1234 ttagctgcaactagaacacatggtgatgagctgagacggtttgatatatcaactcgagca 1175 Query: 633 accctctcacccaaacgtttcttgatccaatcacaggtttgactgtattcctgctt 688 ||| | |||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 1174 accttttcacccaagcgtttcttgatccagtcacatgtttggctgtattcctgctt 1119
>dbj|AK059704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D05, full insert sequence Length = 792 Score = 381 bits (192), Expect = e-102 Identities = 360/416 (86%) Strand = Plus / Minus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttcccgctcagg 332 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| || || Sbjct: 434 tgcgaggcccacttgctagccatagctgtgctcatcatctcatatatcttcccacttagc 375 Query: 333 tcagttgggttatcaggtgtaaagccgctagaaatcattgaagtttcaaagaggatgtcg 392 || | ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 374 tcggcagggttgtcaggtgtaaagccactagagatcatagaagtttcaaacaggatatct 315 Query: 393 attgccttcagagcttccgggtcatcagggttgcttctgcacgcagaattcagtcgcttg 452 | ||||| |||||||| ||||||||||||||| |||||| |||| ||||| | |||| Sbjct: 314 acagcctttagagcttctgggtcatcagggttggctctgcaggcagcattcaagcccttg 255 Query: 453 attatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccagagac 512 || |||||||||||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct: 254 atgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccagagat 195 Query: 513 gacgtatcacctatagactgcgccctcattaacctttccatattggctgaccaaccaaac 572 ||| | ||||| ||||| ||||| ||||| ||||||||||| || || |||||||||||| Sbjct: 194 gacatgtcacccatagattgcgctctcatcaacctttccatgttcgcagaccaaccaaac 135 Query: 573 ttggctgcaactagaacacatggtgatgagctgagacggttggagacatcaactcgagca 632 || |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| Sbjct: 134 ttagctgcaactagaacacatggtgatgagctgagacggtttgatatatcaactcgagca 75 Query: 633 accctctcacccaaacgtttcttgatccaatcacaggtttgactgtattcctgctt 688 ||| | |||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 74 accttttcacccaagcgtttcttgatccagtcacatgtttggctgtattcctgctt 19
>gb|BT017162.1| Zea mays clone EL01N0368C07.c mRNA sequence Length = 1171 Score = 206 bits (104), Expect = 7e-50 Identities = 206/240 (85%) Strand = Plus / Plus Query: 449 cttgattatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccag 508 ||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||| Sbjct: 604 cttgattatctcatgctctgggtttatttcaaaaactttcctcgaacgcatgaaatccaa 663 Query: 509 agacgacgtatcacctatagactgcgccctcattaacctttccatattggctgaccaacc 568 ||| | |||||||| |||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 664 agaggctgtatcacccatagactgtgctctcatcagcctttccatattggctgaccaacc 723 Query: 569 aaacttggctgcaactagaacacatggtgatgagctgagacggttggagacatcaactcg 628 |||||| |||||||| ||||||||||| ||||| |||||||| || || | ||||| || Sbjct: 724 aaacttcgctgcaacaagaacacatggcgatgacctgagacgattagatatgtcaacacg 783 Query: 629 agcaaccctctcacccaaacgtttcttgatccaatcacaggtttgactgtattcctgctt 688 |||||| | |||||||| || ||||| ||||| ||||||| ||| ||| | |||||||| Sbjct: 784 tgcaaccttgtcacccaagcgattctttatccagtcacaggcttggctgaactcctgctt 843
>gb|AY107109.1| Zea mays PCO121171 mRNA sequence Length = 1869 Score = 206 bits (104), Expect = 7e-50 Identities = 206/240 (85%) Strand = Plus / Minus Query: 449 cttgattatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccag 508 ||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||| Sbjct: 1205 cttgattatctcatgctctgggtttatttcaaaaactttcctcgaacgcatgaaatccaa 1146 Query: 509 agacgacgtatcacctatagactgcgccctcattaacctttccatattggctgaccaacc 568 ||| | |||||||| |||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 1145 agaggctgtatcacccatagactgtgctctcatcagcctttccatattggctgaccaacc 1086 Query: 569 aaacttggctgcaactagaacacatggtgatgagctgagacggttggagacatcaactcg 628 |||||| |||||||| ||||||||||| ||||| |||||||| || || | ||||| || Sbjct: 1085 aaacttcgctgcaacaagaacacatggcgatgacctgagacgattagatatgtcaacacg 1026 Query: 629 agcaaccctctcacccaaacgtttcttgatccaatcacaggtttgactgtattcctgctt 688 |||||| | |||||||| || ||||| ||||| ||||||| ||| ||| | |||||||| Sbjct: 1025 tgcaaccttgtcacccaagcgattctttatccagtcacaggcttggctgaactcctgctt 966
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 188 bits (95), Expect = 2e-44 Identities = 134/147 (91%) Strand = Plus / Plus Query: 542 taacctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatga 601 |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 19963396 taacctttccatgttcgcagaccaaccaaacttagctgcaactagaacacatggtgatga 19963455 Query: 602 gctgagacggttggagacatcaactcgagcaaccctctcacccaaacgtttcttgatcca 661 |||||||||||| || | |||||||||||||||| | |||||||| |||||||||||||| Sbjct: 19963456 gctgagacggtttgatatatcaactcgagcaaccttttcacccaagcgtttcttgatcca 19963515 Query: 662 atcacaggtttgactgtattcctgctt 688 ||||| ||||| |||||||||||||| Sbjct: 19963516 gtcacatgtttggctgtattcctgctt 19963542 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 449 cttgattatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccag 508 |||||| |||||||||||||| || |||||||| |||||||| || |||||||||||||| Sbjct: 19963224 cttgatgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccag 19963283 Query: 509 agacgacgtatcacctatagactgcgccctcattaacct 547 ||| ||| | ||||| ||||| ||||| ||||| ||||| Sbjct: 19963284 agatgacatgtcacccatagattgcgctctcatcaacct 19963322 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 350 tgtaaagccgctagaaatcattgaagtttcaaagaggatgtcgattgccttcagagcttc 409 ||||||||| ||||| ||||| ||||||||||| ||||| || | ||||| |||||||| Sbjct: 19963042 tgtaaagccactagagatcatagaagtttcaaacaggatatctacagcctttagagcttc 19963101 Query: 410 cgggtcatcagggttgcttctgcacgcag 438 ||||||||||||||| |||||| |||| Sbjct: 19963102 tgggtcatcagggttggctctgcaggcag 19963130 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttccc 325 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| Sbjct: 19962804 tgcgaggcccacttgctggccatagctgtgctcatcatctcatatatcttccc 19962856
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 188 bits (95), Expect = 2e-44 Identities = 134/147 (91%) Strand = Plus / Plus Query: 542 taacctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatga 601 |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 19889610 taacctttccatgttcgcagaccaaccaaacttagctgcaactagaacacatggtgatga 19889669 Query: 602 gctgagacggttggagacatcaactcgagcaaccctctcacccaaacgtttcttgatcca 661 |||||||||||| || | |||||||||||||||| | |||||||| |||||||||||||| Sbjct: 19889670 gctgagacggtttgatatatcaactcgagcaaccttttcacccaagcgtttcttgatcca 19889729 Query: 662 atcacaggtttgactgtattcctgctt 688 ||||| ||||| |||||||||||||| Sbjct: 19889730 gtcacatgtttggctgtattcctgctt 19889756 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 449 cttgattatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccag 508 |||||| |||||||||||||| || |||||||| |||||||| || |||||||||||||| Sbjct: 19889438 cttgatgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccag 19889497 Query: 509 agacgacgtatcacctatagactgcgccctcattaacct 547 ||| ||| | ||||| ||||| ||||| ||||| ||||| Sbjct: 19889498 agatgacatgtcacccatagattgcgctctcatcaacct 19889536 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 350 tgtaaagccgctagaaatcattgaagtttcaaagaggatgtcgattgccttcagagcttc 409 ||||||||| ||||| ||||| ||||||||||| ||||| || | ||||| |||||||| Sbjct: 19889256 tgtaaagccactagagatcatagaagtttcaaacaggatatctacagcctttagagcttc 19889315 Query: 410 cgggtcatcagggttgcttctgcacgcag 438 ||||||||||||||| |||||| |||| Sbjct: 19889316 tgggtcatcagggttggctctgcaggcag 19889344 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttccc 325 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| Sbjct: 19889018 tgcgaggcccacttgctggccatagctgtgctcatcatctcatatatcttccc 19889070
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 188 bits (95), Expect = 2e-44 Identities = 134/147 (91%) Strand = Plus / Minus Query: 542 taacctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatga 601 |||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 63864 taacctttccatgttcgcagaccaaccaaacttagctgcaactagaacacatggtgatga 63805 Query: 602 gctgagacggttggagacatcaactcgagcaaccctctcacccaaacgtttcttgatcca 661 |||||||||||| || | |||||||||||||||| | |||||||| |||||||||||||| Sbjct: 63804 gctgagacggtttgatatatcaactcgagcaaccttttcacccaagcgtttcttgatcca 63745 Query: 662 atcacaggtttgactgtattcctgctt 688 ||||| ||||| |||||||||||||| Sbjct: 63744 gtcacatgtttggctgtattcctgctt 63718 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 449 cttgattatctcatgctctggatttatttcaaatactttcctggaccgcatgaaatccag 508 |||||| |||||||||||||| || |||||||| |||||||| || |||||||||||||| Sbjct: 64036 cttgatgatctcatgctctgggttgatttcaaaaactttcctagaacgcatgaaatccag 63977 Query: 509 agacgacgtatcacctatagactgcgccctcattaacct 547 ||| ||| | ||||| ||||| ||||| ||||| ||||| Sbjct: 63976 agatgacatgtcacccatagattgcgctctcatcaacct 63938 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 350 tgtaaagccgctagaaatcattgaagtttcaaagaggatgtcgattgccttcagagcttc 409 ||||||||| ||||| ||||| ||||||||||| ||||| || | ||||| |||||||| Sbjct: 64218 tgtaaagccactagagatcatagaagtttcaaacaggatatctacagcctttagagcttc 64159 Query: 410 cgggtcatcagggttgcttctgcacgcag 438 ||||||||||||||| |||||| |||| Sbjct: 64158 tgggtcatcagggttggctctgcaggcag 64130 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 273 tgcgacgcccacttgcccgccatagctgtactcatcatgtcatagatcttccc 325 ||||| |||||||||| ||||||||||| |||||||| ||||| |||||||| Sbjct: 64456 tgcgaggcccacttgctggccatagctgtgctcatcatctcatatatcttccc 64404
>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein Length = 2654 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatgagct 604 ||||||||| || || ||||||||||||||| | | || |||||||||||||| ||||| Sbjct: 2057 cctttccatgttagccgaccaaccaaacttgccagatacaagaacacatggtgaagagct 1998 Query: 605 gag 607 ||| Sbjct: 1997 gag 1995
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 544 acctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtga 598 |||||||||| ||||| ||||||||||||||| | | || |||||||||||||| Sbjct: 24118475 acctttccatgttggcagaccaaccaaacttgccagatacaagaacacatggtga 24118529
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 544 acctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtga 598 |||||||||| ||||| ||||||||||||||| | | || |||||||||||||| Sbjct: 71961 acctttccatgttggcagaccaaccaaacttgccagatacaagaacacatggtga 72015
>ref|NM_111656.2| Arabidopsis thaliana ATP binding / unfolded protein binding AT3G07770 mRNA, complete cds Length = 2663 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgaccaaccaaa 571 |||||| ||| ||||||||||||||||||||||| Sbjct: 2103 tcattagcctctccatattggctgaccaaccaaa 2070
>emb|AJ719165.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT21-3-205, cultivar Bright Yellow 2 Length = 165 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 549 tccatattggctgaccaaccaaactt 574 |||||||||||||||||||||||||| Sbjct: 62 tccatattggctgaccaaccaaactt 37
>ref|XM_483065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2702 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtga 598 |||||||| ||||| ||||||||||||||| | | || |||||||||||||| Sbjct: 2088 ctttccatgttggcagaccaaccaaacttgccagatacaagaacacatggtga 2036
>gb|AY815927.1| Schistosoma japonicum SJCHGC00820 protein mRNA, complete cds Length = 2253 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaact 573 |||||||||||| |||||||||||||||| Sbjct: 1814 cctttccatatttgctgaccaaccaaact 1786
>gb|AY815164.1| Schistosoma japonicum SJCHGC02058 protein mRNA, complete cds Length = 719 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaact 573 |||||||||||| |||||||||||||||| Sbjct: 282 cctttccatatttgctgaccaaccaaact 254
>dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K17, full insert sequence Length = 2702 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtga 598 |||||||| ||||| ||||||||||||||| | | || |||||||||||||| Sbjct: 2088 ctttccatgttggcagaccaaccaaacttgccagatacaagaacacatggtga 2036
>gb|AY104129.1| Zea mays PCO085355 mRNA sequence Length = 1075 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatga 601 ||||||||||||||| |||||||| |||||| | | || ||||||||||| ||||| Sbjct: 525 cctttccatattggcggaccaaccgaacttgccagatacgagaacacatggagatga 469
>gb|AC009176.5|ATAC009176 Arabidopsis thaliana chromosome III P1 MLP3 genomic sequence, complete sequence Length = 79296 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 544 acctttccatattggctgaccaaccaaa 571 |||| ||||||||||||||||||||||| Sbjct: 69309 acctctccatattggctgaccaaccaaa 69282
>gb|AC013483.7|ATAC013483 Arabidopsis thaliana chromosome III BAC F17A17 genomic sequence, complete sequence Length = 121054 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 544 acctttccatattggctgaccaaccaaa 571 |||| ||||||||||||||||||||||| Sbjct: 34343 acctctccatattggctgaccaaccaaa 34316
>dbj|AP008950.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572b, complete sequence Length = 38431 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 642 cccaaacgtttcttgatccaatcacaggtttgactgtattcctgcttcaattcctt 697 ||||||||||| |||||||| ||||| ||||| | |||||||||||| |||||| Sbjct: 32375 cccaaacgttttttgatccagtcacatgtttgggcgaattcctgcttcacttcctt 32320
>gb|AF500172.1| Candida parapsilosis heat shock protein 90 (hsp 90) gene, partial cds Length = 966 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 549 tccatattggctgaccaaccaaa 571 ||||||||||||||||||||||| Sbjct: 605 tccatattggctgaccaaccaaa 583
>gb|AY106328.1| Zea mays PCO125641 mRNA sequence Length = 1769 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatgagct 604 ||||||||| ||||||||||| ||||| || | | ||| ||||||||||| || ||||| Sbjct: 1217 cctttccatgttggctgaccagccaaatttaccagaaacaagaacacatggagaagagct 1158 Query: 605 gag 607 ||| Sbjct: 1157 gag 1155
>ref|XM_715747.1| Candida albicans SC5314 hypothetical protein (CaO19_13868), mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaa 571 |||||||||||||| ||||||||||| Sbjct: 1763 ctttccatattggcagaccaaccaaa 1738
>gb|AC131088.4| Mus musculus chromosome 1, clone RP24-87K23, complete sequence Length = 189705 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 gatttatttcaaatactttcct 490 |||||||||||||||||||||| Sbjct: 30232 gatttatttcaaatactttcct 30211
>ref|XM_716260.1| Candida albicans SC5314 hypothetical protein (HSP90) partial mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaa 571 |||||||||||||| ||||||||||| Sbjct: 1763 ctttccatattggcagaccaaccaaa 1738
>ref|XM_883730.1| Candida albicans SC5314 hypothetical protein (CaJ7.0234) partial mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaa 571 |||||||||||||| ||||||||||| Sbjct: 1763 ctttccatattggcagaccaaccaaa 1738
>gb|AC110269.8| Mus musculus chromosome 1, clone RP23-322P13, complete sequence Length = 251855 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 gatttatttcaaatactttcct 490 |||||||||||||||||||||| Sbjct: 5397 gatttatttcaaatactttcct 5418
>emb|X81025.1|CAHSP90 C.albicans hsp90 gene Length = 2937 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaa 571 |||||||||||||| ||||||||||| Sbjct: 2433 ctttccatattggcagaccaaccaaa 2408
>gb|AC097505.2| Homo sapiens BAC clone RP11-362J17 from 4, complete sequence Length = 184043 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 tggcttggctgggcaggttggggctg 274 |||||||| ||||||||||||||||| Sbjct: 74705 tggcttggatgggcaggttggggctg 74730
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Plus Query: 544 acctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatgagc 603 |||||||||| || |||||||||||||| ||| | | || ||||||||||| || |||| Sbjct: 18097003 acctttccatgtttgctgaccaaccaaatttgccagatacaagaacacatggcgaagagc 18097062 Query: 604 tgagacggtt 613 | || ||||| Sbjct: 18097063 taagccggtt 18097072
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Plus Query: 544 acctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatgagc 603 |||||||||| || |||||||||||||| ||| | | || ||||||||||| || |||| Sbjct: 90125 acctttccatgtttgctgaccaaccaaatttgccagatacaagaacacatggcgaagagc 90184 Query: 604 tgagacggtt 613 | || ||||| Sbjct: 90185 taagccggtt 90194
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 546 ctttccatattggctgaccaaccaaa 571 |||||||||||||| ||||||||||| Sbjct: 441294 ctttccatattggcagaccaaccaaa 441269
>dbj|AP006732.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02K14, TM0918a, complete sequence Length = 48600 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 639 tcacccaaacgtttcttgatcc 660 |||||||||||||||||||||| Sbjct: 24262 tcacccaaacgtttcttgatcc 24283
>gb|AC116727.9| Mus musculus chromosome 3, clone RP23-290J2, complete sequence Length = 163945 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 attaacctttccatattggct 560 ||||||||||||||||||||| Sbjct: 41571 attaacctttccatattggct 41551
>gb|BC051958.1| Mus musculus GTP binding protein 2, mRNA (cDNA clone MGC:62220 IMAGE:5720710), complete cds Length = 2943 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2420 tattcctgcttcatttccttttctc 2444
>gb|BC049089.1| Mus musculus GTP binding protein 2, mRNA (cDNA clone MGC:61183 IMAGE:5720710), complete cds Length = 2943 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2420 tattcctgcttcatttccttttctc 2444
>ref|NM_019581.2| Mus musculus GTP binding protein 2 (Gtpbp2), mRNA Length = 2943 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2420 tattcctgcttcatttccttttctc 2444
>gb|AC146034.4| Pan troglodytes BAC clone RP43-16G9 from 7, complete sequence Length = 156208 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ggctgggcaggttggggctgc 275 ||||||||||||||||||||| Sbjct: 78838 ggctgggcaggttggggctgc 78858
>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence Length = 222382 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 124838 tattcctgcttcatttccttttctc 124814
>gb|AC007078.4| Homo sapiens BAC clone RP11-340A14 from 7, complete sequence Length = 14475 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 ggctgggcaggttggggctgc 275 ||||||||||||||||||||| Sbjct: 5267 ggctgggcaggttggggctgc 5247
>emb|AL121898.23|HSA430K20 Human DNA sequence from clone RP11-430K20 on chromosome 20 Contains the 5' end of the PLCB4 gene for phospholipase C beta 4 and a CpG island, complete sequence Length = 210359 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ctgggcaggttggggctgcga 277 ||||||||||||||||||||| Sbjct: 99040 ctgggcaggttggggctgcga 99060
>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17, Complete Sequence, complete sequence Length = 163367 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 90741 tattcctgcttcatttccttttctc 90765
>emb|X63195.1|NTHSP82 N.tabacum mRNA for heat shock protein 82 Length = 1747 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaacca 569 ||||||||||||||||| ||||||| Sbjct: 1155 cctttccatattggctgtccaacca 1131
>dbj|AB226298.1| Aspergillus oryzae cDNA, contig sequence: AoEST3160 Length = 2622 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 549 tccatattggctgaccaaccaaact 573 ||||||||||| ||||||||||||| Sbjct: 1912 tccatattggcagaccaaccaaact 1888
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 549 tccatattggctgaccaaccaaact 573 ||||||||||| ||||||||||||| Sbjct: 1686047 tccatattggcagaccaaccaaact 1686023
>dbj|AK146415.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730081M20 product:GTP binding protein 2, full insert sequence Length = 2912 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2409 tattcctgcttcatttccttttctc 2433
>dbj|AK148020.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270140N07 product:GTP binding protein 2, full insert sequence Length = 2884 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2381 tattcctgcttcatttccttttctc 2405
>dbj|AK087511.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130308E04 product:GTP binding protein 2, full insert sequence Length = 2834 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 678 tattcctgcttcaattccttttctc 702 ||||||||||||| ||||||||||| Sbjct: 2331 tattcctgcttcatttccttttctc 2355
>gb|AC093540.3| Pan troglodytes clone RP43-84M6, complete sequence Length = 171092 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 ggctgggcaggttggggctgc 275 ||||||||||||||||||||| Sbjct: 149556 ggctgggcaggttggggctgc 149576
>dbj|AK073817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G01, full insert sequence Length = 2890 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Minus Query: 545 cctttccatattggctgaccaaccaaacttggctgcaactagaacacatggtgatgagct 604 ||||||||| || |||||||||||||| ||| | | || ||||||||||| || ||||| Sbjct: 2192 cctttccatgtttgctgaccaaccaaatttgccagatacaagaacacatggcgaagagct 2133 Query: 605 gagacggtt 613 || ||||| Sbjct: 2132 aagccggtt 2124
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 tctcatttctgctggccagcc 182 ||||||||||||||||||||| Sbjct: 1079675 tctcatttctgctggccagcc 1079655
>gb|AY067269.1| Schmidtea mediterranea clone HB.10.10a unknown mRNA sequence Length = 708 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 531 tgcgccctcattaacctttccatattggctgaccaaccaaa 571 |||||| |||| | |||||||||||| |||||||| ||||| Sbjct: 413 tgcgccttcataatcctttccatatttgctgaccatccaaa 453
>ref|NM_179601.1| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding AT2G04030 (CR88) transcript variant AT2G04030.2 mRNA, complete cds Length = 2612 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 2040 tcattagcctttccatattagctgacca 2013
>ref|NM_126439.2| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding AT2G04030 (CR88) transcript variant AT2G04030.1 mRNA, complete cds Length = 2621 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 2049 tcattagcctttccatattagctgacca 2022
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 caagcggctcaggttcaggg 227 |||||||||||||||||||| Sbjct: 855193 caagcggctcaggttcaggg 855212
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ttctgctggccagcctcgac 187 |||||||||||||||||||| Sbjct: 1595746 ttctgctggccagcctcgac 1595765
>ref|NM_012302.2| Homo sapiens latrophilin 2 (LPHN2), mRNA Length = 5723 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 3924 tccaatcacaggtttgactg 3905
>gb|BC097018.1| Danio rerio zgc:113924, mRNA (cDNA clone MGC:113925 IMAGE:7247940), complete cds Length = 2834 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 668 ggtttgactgtattcctgct 687 |||||||||||||||||||| Sbjct: 324 ggtttgactgtattcctgct 305
>gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q12.1, complete sequence Length = 192948 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 ctctggatttatttcaaata 483 |||||||||||||||||||| Sbjct: 10512 ctctggatttatttcaaata 10531
>gb|AC132326.3| Mus musculus BAC clone RP24-191F10 from chromosome 16, complete sequence Length = 153544 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ataaaaaggaacaagcagag 97 |||||||||||||||||||| Sbjct: 36934 ataaaaaggaacaagcagag 36915
>gb|AC122821.4| Mus musculus BAC clone RP23-201I4 from chromosome 17, complete sequence Length = 220013 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 110558 gccagagctgtcctcatcatgtcataga 110585
>emb|AL078599.19|HSDJ991C6 Human DNA sequence from clone RP5-991C6 on chromosome 6q14.1-15 Contains the 5' end of a novel gene (FLJ20037, FLJ31495), a ribosomal protein L10 (RPL10) pseudogene, two novel genes and a CpG island, complete sequence Length = 128995 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 467 tggatttatttcaaatactttcct 490 |||| ||||||||||||||||||| Sbjct: 2898 tggaattatttcaaatactttcct 2921
>emb|Y11829.1|ATHSP881 A.thaliana hsp88.1 gene Length = 4544 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 taacctttccatattggctgacca 565 ||||||||||||||| |||||||| Sbjct: 3722 taacctttccatattagctgacca 3699
>emb|BX957221.1| Methanococcus maripaludis S2 complete genome; segment 3/5 Length = 348230 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 671 ttgactgtattcctgcttca 690 |||||||||||||||||||| Sbjct: 163006 ttgactgtattcctgcttca 163025
>gb|AC163293.4| Mus musculus BAC clone RP23-156J21 from chromosome 16, complete sequence Length = 205834 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ataaaaaggaacaagcagag 97 |||||||||||||||||||| Sbjct: 191312 ataaaaaggaacaagcagag 191293
>emb|AL662882.13| Mouse DNA sequence from clone RP23-187N13 on chromosome 11, complete sequence Length = 222359 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 ataataaaaaggaacaagca 94 |||||||||||||||||||| Sbjct: 147355 ataataaaaaggaacaagca 147374
>gb|AC104350.6| Homo sapiens chromosome 8, clone RP11-1112C15, complete sequence Length = 152908 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 ctctggatttatttcaaata 483 |||||||||||||||||||| Sbjct: 10512 ctctggatttatttcaaata 10531
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tgctggcttggctgggcaggttgg 269 |||||||||| ||||||||||||| Sbjct: 2354229 tgctggcttgtctgggcaggttgg 2354252
>emb|CR621974.1| full-length cDNA clone CS0DE007YG20 of Placenta of Homo sapiens (human) Length = 1402 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 291 tccaatcacaggtttgactg 272
>dbj|AK123422.1| Homo sapiens cDNA FLJ41428 fis, clone BRHIP2005236, highly similar to Bos taurus latrophilin 2 Length = 3137 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 1356 tccaatcacaggtttgactg 1337
>gb|AC079096.4| Homo sapiens chromosome 18, clone RP11-75N4, complete sequence Length = 119927 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aaaggaacaagcagagagcgtggg 105 ||||||||||| |||||||||||| Sbjct: 61723 aaaggaacaaggagagagcgtggg 61700
>gb|AY094422.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2596 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 2049 tcattagcctttccatattagctgacca 2022
>gb|AC113949.2| Homo sapiens chromosome 1 clone RP11-563M18, complete sequence Length = 172143 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 43937 tccaatcacaggtttgactg 43918
>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete sequence Length = 103874 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 taacctttccatattggctgacca 565 ||||||||||||||| |||||||| Sbjct: 94294 taacctttccatattagctgacca 94271
>gb|AC017100.4| Homo sapiens BAC clone RP11-549B18 from 18, complete sequence Length = 202950 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 aaaggaacaagcagagagcgtggg 105 ||||||||||| |||||||||||| Sbjct: 180684 aaaggaacaaggagagagcgtggg 180707
>gb|AF436826.1|AF436826 Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2610 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 2049 tcattagcctttccatattagctgacca 2022
>gb|AY053403.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2507 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 2034 tcattagcctttccatattagctgacca 2007
>gb|AC073057.6| Homo sapiens BAC clone RP11-114G11 from 7, complete sequence Length = 178105 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gaaataataaaaaggaacaa 91 |||||||||||||||||||| Sbjct: 32327 gaaataataaaaaggaacaa 32346
>dbj|AK087218.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030034P13 product:unclassifiable, full insert sequence Length = 3164 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 2052 gccagagctgtcctcatcatgtcataga 2025
>dbj|AK034869.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430051J17 product:similar to HYPOTHETICAL PROTEIN DKFZP761A132 [Homo sapiens], full insert sequence Length = 2938 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 2782 gccagagctgtcctcatcatgtcataga 2809
>emb|BX005098.11| Zebrafish DNA sequence from clone DKEY-211F22 in linkage group 7, complete sequence Length = 100658 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aataataaaaaggaacaagc 93 |||||||||||||||||||| Sbjct: 48913 aataataaaaaggaacaagc 48932
>emb|BX820811.1|CNS0A8OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 221 tcattagcctttccatattagctgacca 194
>gb|AC005798.10|AC005798 Homo sapiens chromosome 4 clone RP11-442P12, complete sequence Length = 206631 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aataataaaaaggaacaagc 93 |||||||||||||||||||| Sbjct: 141770 aataataaaaaggaacaagc 141789
>gb|AC136601.2| Homo sapiens chromosome 5 clone RP11-1259L22, complete sequence Length = 186323 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ggtcatcagggttgcttctg 431 |||||||||||||||||||| Sbjct: 72115 ggtcatcagggttgcttctg 72096
>gb|AC136605.2| Homo sapiens chromosome 5 clone RP11-1380A14, complete sequence Length = 171395 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ggtcatcagggttgcttctg 431 |||||||||||||||||||| Sbjct: 84441 ggtcatcagggttgcttctg 84422
>gb|L14331.1| Caenorhabditis elegans cosmid K12H4, complete sequence Length = 38582 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 tttatttcaaatactttcct 490 |||||||||||||||||||| Sbjct: 32437 tttatttcaaatactttcct 32456
>gb|AF296825.1|F5O24 Arabidopsis thaliana BAC F5O24 Length = 101458 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 gctagaaatcattgaagttt 378 |||||||||||||||||||| Sbjct: 27948 gctagaaatcattgaagttt 27929
>dbj|AK205577.1| Mus musculus cDNA, clone:Y2G0102C13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000045517, based on BLAT search Length = 409 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 313 gccagagctgtcctcatcatgtcataga 340
>dbj|AK129391.1| Mus musculus mRNA for mKIAA1552 protein Length = 2503 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 2347 gccagagctgtcctcatcatgtcataga 2374
>gb|BT002234.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds Length = 2343 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 538 tcattaacctttccatattggctgacca 565 |||||| |||||||||||| |||||||| Sbjct: 1966 tcattagcctttccatattagctgacca 1939
>emb|AJ131581.1|HSA131581 Homo sapiens mRNA for latrophilin-2 Length = 4669 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 3888 tccaatcacaggtttgactg 3869
>gb|BC025645.1| Mus musculus FLYWCH-type zinc finger 1, mRNA (cDNA clone IMAGE:5323568), partial cds Length = 1747 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 gccatagctgtactcatcatgtcataga 318 |||| |||||| |||||||||||||||| Sbjct: 1574 gccagagctgtcctcatcatgtcataga 1601
>gb|AF104939.1|AF104939 Homo sapiens lectomedin-1 gamma (LEC1) mRNA, complete cds Length = 5479 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 3924 tccaatcacaggtttgactg 3905
>gb|AF104266.1|AF104266 Homo sapiens lectomedin-1 alpha (LEC1) mRNA, complete cds Length = 5585 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 4030 tccaatcacaggtttgactg 4011
>gb|AF104938.1|AF104938 Homo sapiens lectomedin-1 beta (LEC1) mRNA, complete cds Length = 5381 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 3827 tccaatcacaggtttgactg 3808
>emb|AJ244516.1|HSA244516 Homo sapiens LPHH1 gene, exon 19 Length = 1100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 431 tccaatcacaggtttgactg 412
>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence Length = 189356 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 aaataataaaaaggaacaag 92 |||||||||||||||||||| Sbjct: 174275 aaataataaaaaggaacaag 174256
>gb|AC093290.4| Homo sapiens chromosome 5 clone RP11-47L17, complete sequence Length = 179443 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ggtcatcagggttgcttctg 431 |||||||||||||||||||| Sbjct: 64698 ggtcatcagggttgcttctg 64717
>dbj|AB018329.1| Homo sapiens mRNA for KIAA0786 protein, partial cds Length = 4345 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 tccaatcacaggtttgactg 677 |||||||||||||||||||| Sbjct: 2564 tccaatcacaggtttgactg 2545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,820,073 Number of Sequences: 3902068 Number of extensions: 5820073 Number of successful extensions: 100088 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99708 Number of HSP's gapped (non-prelim): 380 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)