>NETB_DROME (Q24568) Netrin-B precursor|
          Length = 793

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 174 NNFGFSQEHDHWTTFLCICPRNTGGPHETTCDPFFF 281
           N+FG S +     T  C C  NT GP    C PF+F
Sbjct: 445 NHFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYF 480

>AROE_THEAC (Q9HLE4) Shikimate dehydrogenase (EC 1.1.1.25)|
          Length = 268

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
 Frame = -3

Query: 472 DVLVLNVQDPFQRLLLHGVCEFYN--------VTSTTTGTVQDGKPWKTTTIKK-RSGTG 320
           DVL  N Q+  + L + G+    N        V  T  GT+ DG P+ T   +  R+G  
Sbjct: 147 DVLTRNAQNARRNLDIPGIGLHENIDEDYDIYVNCTPLGTLGDGDPFSTVDFRSGRTGID 206

Query: 319 VAPRITLVSFLRTKKN-GSHVVS*GPPVFLGQ 227
           +        FL+  +N G   VS G  VF+GQ
Sbjct: 207 LVYNPPDTPFLKRMRNAGGRTVS-GLDVFIGQ 237

>METE_BLOFL (Q7VRI8) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 769

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
 Frame = -3

Query: 568 QTREAMKRNFLPELLEIYEERIRAFIEDN-----IDKDVLVLNVQDPFQRLLLHGVCEFY 404
           +T+E  + + LP LL +Y+E      + N     ID+  LVL +   + +  LH   + Y
Sbjct: 176 ETKEFDRLSLLPSLLLVYKEIFNILSKKNIQWIQIDEPALVLELPQTWLKAYLHAYDQLY 235

Query: 403 NVTSTTTGTVQDGKPWKTTTIKKR 332
                   T   GK +    I K+
Sbjct: 236 QTKIKLLLTTYFGKIYHQLPIIKQ 259

>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch|
           1) (Motch A) (mT14) (p300) [Contains: Notch 1
           extracellular truncation; Notch 1 intracellular domain]
          Length = 2531

 Score = 27.7 bits (60), Expect(2) = 5.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 281 CSQETDQCDPGGNTC 325
           CSQ+ D+CD G N C
Sbjct: 409 CSQDVDECDLGANRC 423



 Score = 20.8 bits (42), Expect(2) = 5.3
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +3

Query: 198 HDHWTTFLCICPRNTGG 248
           HD   +F C CP    G
Sbjct: 351 HDRVASFYCECPHGRTG 367

>HXA10_MORSA (Q9PWD6) Homeobox protein Hox-A10|
          Length = 289

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 326 HRCCPQDHIGQFPENKEERVTRCLVRTPRIPRTNTKE 216
           H   PQ     FP+N +E  T CL   P+ P+ +T E
Sbjct: 20  HPVGPQVAPCSFPQNIKEESTYCLYEQPKCPKASTAE 56

>PA22_NAJKA (P00597) Phospholipase A2 isozyme 2 precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase) (NnkPLA-II)
           (CM-III)
          Length = 146

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 281 CSQETDQCDPGGNTCARTLLDCCCLPRLSILHSTRGRRRYVVEL 412
           CSQ T  C  G N CA  + DC  L  +    +      Y ++L
Sbjct: 98  CSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYNNNNYNIDL 141

>PA22_NAJAT (Q91133) Phospholipase A2 2 precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 146

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 281 CSQETDQCDPGGNTCARTLLDCCCLPRLSILHSTRGRRRYVVEL 412
           CSQ T  C  G N CA  + DC  L  +    +      Y ++L
Sbjct: 98  CSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYNNNNYNIDL 141

>PA21_NAJAT (P00598) Phospholipase A2 1 precursor (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 146

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 281 CSQETDQCDPGGNTCARTLLDCCCLPRLSILHSTRGRRRYVVEL 412
           CSQ T  C  G N CA  + DC  L  +    +      Y ++L
Sbjct: 98  CSQGTLTCKGGNNACAAAVCDCDRLAAICFAGAPYNNNNYNIDL 141

>TPOR_HUMAN (P40238) Thrombopoietin receptor precursor (TPO-R)|
           (Myeloproliferative leukemia protein) (C-mpl) (CD110
           antigen)
          Length = 635

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -2

Query: 371 RWKAVEDNNNQEAFGH---RCCPQDHIGQFPENKEERVTRCLVRTPRIPRTNTK 219
           +W+  +  ++Q  F H   RCCP+D    +   +EE  T   ++TP+  R + K
Sbjct: 302 QWQQQDHASSQGFFYHSRARCCPRDRYPIWENCEEEEKTNPGLQTPQFSRCHFK 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,297,274
Number of Sequences: 219361
Number of extensions: 2057846
Number of successful extensions: 5254
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5253
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)