ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469152.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 2e-37
3gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genom... 165 2e-37
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
5dbj|AK102165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
6ref|XM_469151.1| Oryza sativa (japonica cultivar-group), mRNA 147 5e-32
7ref|XM_469961.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.037
8gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 48 0.037
9gb|DQ132512.1|DQ132511S2 Mus musculus strain 129Sv/J EAT2b (Eat2... 44 0.57
10emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chro... 44 0.57
11emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d... 44 0.57
12emb|CT009653.2| Medicago truncatula chromosome 5 clone mth2-173o... 44 0.57
13emb|AL359732.12| Human DNA sequence from clone RP11-450B15 on ch... 42 2.3
14emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chr... 42 2.3
15gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, re... 42 2.3
16gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 42 2.3
17emb|AL049830.3|CNS00009 Human chromosome 14 DNA sequence BAC R-8... 42 2.3
18emb|AL845304.4| Mouse DNA sequence from clone RP23-184H6 on chro... 42 2.3
19emb|AL731724.8| Mouse DNA sequence from clone RP23-1F19 on chrom... 42 2.3
20gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
21ref|XM_519101.1| PREDICTED: Pan troglodytes LOC463414 (LOC463414... 40 8.9
22gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q... 40 8.9
23gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q2... 40 8.9
24gb|AC182669.2| Populus trichocarpa clone Pop1-21I14, complete se... 40 8.9
25ref|XM_536835.2| PREDICTED: Canis familiaris hypothetical LOC479... 40 8.9
26gb|AC004965.2| Homo sapiens PAC clone RP5-1106H14 from 7, comple... 40 8.9
27gb|AC069313.5| Homo sapiens BAC clone CTD-2016H9 from 7, complet... 40 8.9
28gb|AC143356.1| Pan troglodytes BAC clone RP43-64A13 from 7, comp... 40 8.9
29emb|BX016132.1|CNS08KM0 Single read from an extremity of a full-... 40 8.9
30emb|X73141.1|SHTLYCA S.hyodysenteriae gene for tlyC hemolysin 40 8.9
31gb|U41547.2| Caenorhabditis elegans cosmid F22A3, complete sequence 40 8.9
32gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Ca... 40 8.9
33emb|AL645683.7| Mouse DNA sequence from clone RP23-374M7 on chro... 40 8.9
34gb|AC182731.2| Pan troglodytes BAC clone CH251-677O10 from chrom... 40 8.9
35emb|CR613464.1| full-length cDNA clone CS0DF036YK13 of Fetal bra... 40 8.9
36gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, comp... 40 8.9
37gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, compl... 40 8.9
38gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, com... 40 8.9
39dbj|AK140859.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 8.9
40gb|AC093858.2| Homo sapiens BAC clone RP11-535C7 from 4, complet... 40 8.9
41dbj|AK141444.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 40 8.9
42gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, comp... 40 8.9
43gb|AC027328.4| Homo sapiens chromosome 5 clone CTD-2136J7, compl... 40 8.9
44gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.9
45gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome... 40 8.9
46dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
48gb|AC074088.5| Homo sapiens BAC clone RP11-122B24 from 4, comple... 40 8.9
49gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, comple... 40 8.9
50gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell ... 40 8.9
51gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse... 40 8.9
52gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K... 40 8.9
53gb|AC107810.8| Mus musculus chromosome 1, clone RP23-68D4, compl... 40 8.9
54dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
55dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
56emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chr... 40 8.9
57ref|NM_210558.1| Eremothecium gossypii AER348Cp (AER348C), mRNA 40 8.9
58gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 ... 40 8.9
59emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2... 40 8.9
60gb|AC158116.2| Gallus gallus BAC clone CH261-122G21 from chromos... 40 8.9
61gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complet... 40 8.9
62gb|AC002546.1|AC002546 Homo sapiens chromosome 17, clone 193h18,... 40 8.9
63gb|AC155316.6| Mus musculus BAC clone RP23-181P9 from chromosome... 40 8.9
64dbj|AB223056.1| Oryzias latipes gene for SWS2 type opsin SWS2-A,... 40 8.9
65gb|AC170864.2| Mus musculus BAC clone RP24-576D1 from chromosome... 40 8.9
66emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chro... 40 8.9 
>ref|XM_469152.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2937

 Score =  165 bits (83), Expect = 2e-37
 Identities = 158/183 (86%)
 Strand = Plus / Minus

                                                                        
Query: 472  tggctccatggggatgcacaatcagtaaaagttgatatctgtgtaactgcgtggataagt 531
            ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 2752 tggctccatcgagatacacaatcaataaaaattgatatctgtgtaactgcgtggataagt 2693

                                                                        
Query: 532  tgggtatggcagctcatccacccccattagggagctggaacgagtgaagctgccgaattg 591
            ||||||||| || ||||||||||||||||| ||| | |||||||  |||||||  |||||
Sbjct: 2692 tgggtatggtagttcatccacccccattagagaggtagaacgagcaaagctgcaaaattg 2633

                                                                        
Query: 592  ggcctggctcggcagcttcacctccgccgtgaaaatgctgtatacgggtctgtggtccga 651
            ||  |||||||| | ||  |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 2632 ggtttggctcggtatctgaacctccgcagtgaaaatgctgtatacaggcctgtgatctga 2573

               
Query: 652  gaa 654
            |||
Sbjct: 2572 gaa 2570
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 2e-37
 Identities = 158/183 (86%)
 Strand = Plus / Minus

                                                                            
Query: 472      tggctccatggggatgcacaatcagtaaaagttgatatctgtgtaactgcgtggataagt 531
                ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 25781834 tggctccatcgagatacacaatcaataaaaattgatatctgtgtaactgcgtggataagt 25781775

                                                                            
Query: 532      tgggtatggcagctcatccacccccattagggagctggaacgagtgaagctgccgaattg 591
                ||||||||| || ||||||||||||||||| ||| | |||||||  |||||||  |||||
Sbjct: 25781774 tgggtatggtagttcatccacccccattagagaggtagaacgagcaaagctgcaaaattg 25781715

                                                                            
Query: 592      ggcctggctcggcagcttcacctccgccgtgaaaatgctgtatacgggtctgtggtccga 651
                ||  |||||||| | ||  |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 25781714 ggtttggctcggtatctgaacctccgcagtgaaaatgctgtatacaggcctgtgatctga 25781655

                   
Query: 652      gaa 654
                |||
Sbjct: 25781654 gaa 25781652



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 611      acctccgccgtgaaaatgctgtatacgggtctgtggtccgagaa 654
                ||||||||| ||||||||||||| || ||||| ||||| |||||
Sbjct: 32710363 acctccgccatgaaaatgctgtacaccggtctatggtcggagaa 32710320
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>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete
             sequence
          Length = 190834

 Score =  165 bits (83), Expect = 2e-37
 Identities = 158/183 (86%)
 Strand = Plus / Plus

                                                                         
Query: 472   tggctccatggggatgcacaatcagtaaaagttgatatctgtgtaactgcgtggataagt 531
             ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 63062 tggctccatcgagatacacaatcaataaaaattgatatctgtgtaactgcgtggataagt 63121

                                                                         
Query: 532   tgggtatggcagctcatccacccccattagggagctggaacgagtgaagctgccgaattg 591
             ||||||||| || ||||||||||||||||| ||| | |||||||  |||||||  |||||
Sbjct: 63122 tgggtatggtagttcatccacccccattagagaggtagaacgagcaaagctgcaaaattg 63181

                                                                         
Query: 592   ggcctggctcggcagcttcacctccgccgtgaaaatgctgtatacgggtctgtggtccga 651
             ||  |||||||| | ||  |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 63182 ggtttggctcggtatctgaacctccgcagtgaaaatgctgtatacaggcctgtgatctga 63241

                
Query: 652   gaa 654
             |||
Sbjct: 63242 gaa 63244
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 158/183 (86%)
 Strand = Plus / Minus

                                                                            
Query: 472      tggctccatggggatgcacaatcagtaaaagttgatatctgtgtaactgcgtggataagt 531
                ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 25873143 tggctccatcgagatacacaatcaataaaaattgatatctgtgtaactgcgtggataagt 25873084

                                                                            
Query: 532      tgggtatggcagctcatccacccccattagggagctggaacgagtgaagctgccgaattg 591
                ||||||||| || ||||||||||||||||| ||| | |||||||  |||||||  |||||
Sbjct: 25873083 tgggtatggtagttcatccacccccattagagaggtagaacgagcaaagctgcaaaattg 25873024

                                                                            
Query: 592      ggcctggctcggcagcttcacctccgccgtgaaaatgctgtatacgggtctgtggtccga 651
                ||  |||||||| | ||  |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 25873023 ggtttggctcggtatctgaacctccgcagtgaaaatgctgtatacaggcctgtgatctga 25872964

                   
Query: 652      gaa 654
                |||
Sbjct: 25872963 gaa 25872961



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 611      acctccgccgtgaaaatgctgtatacgggtctgtggtccgagaa 654
                ||||||||| ||||||||||||| || ||||| ||||| |||||
Sbjct: 32800873 acctccgccatgaaaatgctgtacaccggtctatggtcggagaa 32800830
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>dbj|AK102165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086H07, full
            insert sequence
          Length = 2938

 Score =  165 bits (83), Expect = 2e-37
 Identities = 158/183 (86%)
 Strand = Plus / Minus

                                                                        
Query: 472  tggctccatggggatgcacaatcagtaaaagttgatatctgtgtaactgcgtggataagt 531
            ||||||||| | ||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 2753 tggctccatcgagatacacaatcaataaaaattgatatctgtgtaactgcgtggataagt 2694

                                                                        
Query: 532  tgggtatggcagctcatccacccccattagggagctggaacgagtgaagctgccgaattg 591
            ||||||||| || ||||||||||||||||| ||| | |||||||  |||||||  |||||
Sbjct: 2693 tgggtatggtagttcatccacccccattagagaggtagaacgagcaaagctgcaaaattg 2634

                                                                        
Query: 592  ggcctggctcggcagcttcacctccgccgtgaaaatgctgtatacgggtctgtggtccga 651
            ||  |||||||| | ||  |||||||| ||||||||||||||||| || ||||| || ||
Sbjct: 2633 ggtttggctcggtatctgaacctccgcagtgaaaatgctgtatacaggcctgtgatctga 2574

               
Query: 652  gaa 654
            |||
Sbjct: 2573 gaa 2571
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>ref|XM_469151.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score =  147 bits (74), Expect = 5e-32
 Identities = 137/158 (86%)
 Strand = Plus / Minus

                                                                        
Query: 497  taaaagttgatatctgtgtaactgcgtggataagttgggtatggcagctcatccaccccc 556
            ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1685 taaaaattgatatctgtgtaactgcgtggataagttgggtatggtagttcatccaccccc 1626

                                                                        
Query: 557  attagggagctggaacgagtgaagctgccgaattgggcctggctcggcagcttcacctcc 616
            ||||| ||| | |||||||  |||||||  |||||||  |||||||| | ||  ||||||
Sbjct: 1625 attagagaggtagaacgagcaaagctgcaaaattgggtttggctcggtatctgaacctcc 1566

                                                  
Query: 617  gccgtgaaaatgctgtatacgggtctgtggtccgagaa 654
            || ||||||||||||||||| || ||||| || |||||
Sbjct: 1565 gcagtgaaaatgctgtatacaggcctgtgatctgagaa 1528
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>ref|XM_469961.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1620

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 611  acctccgccgtgaaaatgctgtatacgggtctgtggtccgagaa 654
            ||||||||| ||||||||||||| || ||||| ||||| |||||
Sbjct: 1511 acctccgccatgaaaatgctgtacaccggtctatggtcggagaa 1468
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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 611   acctccgccgtgaaaatgctgtatacgggtctgtggtccgagaa 654
             ||||||||| ||||||||||||| || ||||| ||||| |||||
Sbjct: 33544 acctccgccatgaaaatgctgtacaccggtctatggtcggagaa 33587
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>gb|DQ132512.1|DQ132511S2 Mus musculus strain 129Sv/J EAT2b (Eat2b) gene, exons 2 through 4 and
            complete cds
          Length = 6672

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 8    gtggctgttcctttcttctttttgac 33
            ||||||| ||||||||||||||||||
Sbjct: 5924 gtggctgatcctttcttctttttgac 5949
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>emb|AL626807.7| Mouse DNA sequence from clone RP23-350G1 on chromosome 11 Contains two
              novel genes, the 5' end of the Accn1 gene for neuronal
              amiloride-sensitive cation channel 1 (degenerin) and the
              Ccl2 and Ccl7 genes for chemokine (C-C motif) ligand 2 and
              7, complete sequence
          Length = 223726

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 231    agactggagctgccctgcattt 252
              ||||||||||||||||||||||
Sbjct: 218548 agactggagctgccctgcattt 218569
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>emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d20, COMPLETE SEQUENCE
          Length = 131814

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 293    caaaactgtgcacaaccaacaa 314
              ||||||||||||||||||||||
Sbjct: 122476 caaaactgtgcacaaccaacaa 122455
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>emb|CT009653.2| Medicago truncatula chromosome 5 clone mth2-173o18, COMPLETE
           SEQUENCE
          Length = 115799

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 293 caaaactgtgcacaaccaacaa 314
           ||||||||||||||||||||||
Sbjct: 153 caaaactgtgcacaaccaacaa 132
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>emb|AL359732.12| Human DNA sequence from clone RP11-450B15 on chromosome 1 Contains the
             5' end of the PSEN2 gene for presenilin 2 (Alzheimer
             disease 4), complete sequence
          Length = 93426

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    ctcagctgagcccagccaacc 62
             |||||||||||||||||||||
Sbjct: 31796 ctcagctgagcccagccaacc 31776
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>emb|AL353600.10| Human DNA sequence from clone RP11-90B22 on chromosome 10 Contains the 5'
              end of the NRP1 gene for neuropilin 1, a novel gene and a
              CpG island, complete sequence
          Length = 124540

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     tttcttctttttgactaaaac 39
              |||||||||||||||||||||
Sbjct: 120272 tttcttctttttgactaaaac 120252
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>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone
              BACR25I22, complete sequence
          Length = 164942

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     aaaaagaagaaaaatccaagc 116
              |||||||||||||||||||||
Sbjct: 115529 aaaaagaagaaaaatccaagc 115509
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>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
              sequence
          Length = 302538

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     aaaaagaagaaaaatccaagc 116
              |||||||||||||||||||||
Sbjct: 217721 aaaaagaagaaaaatccaagc 217701
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>emb|AL049830.3|CNS00009 Human chromosome 14 DNA sequence BAC R-829H16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214558

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    aaatcttcctaaatctagaat 342
              |||||||||||||||||||||
Sbjct: 122184 aaatcttcctaaatctagaat 122204
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>emb|AL845304.4| Mouse DNA sequence from clone RP23-184H6 on chromosome X, complete
             sequence
          Length = 160065

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   agggatggttagaatcaatca 294
             |||||||||||||||||||||
Sbjct: 81542 agggatggttagaatcaatca 81562
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>emb|AL731724.8| Mouse DNA sequence from clone RP23-1F19 on chromosome 2, complete
             sequence
          Length = 205917

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 86    aaaccaagcaaaaaagaagaaaaat 110
             ||||||| |||||||||||||||||
Sbjct: 10397 aaaccaaacaaaaaagaagaaaaat 10421
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>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    accaagcaaaaaagaagaaaaatc 111
             |||||||||||||||| |||||||
Sbjct: 97335 accaagcaaaaaagaaaaaaaatc 97358
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>ref|XM_519101.1| PREDICTED: Pan troglodytes LOC463414 (LOC463414), mRNA
          Length = 1829

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   aaaaagaagaaaaatccaag 115
            ||||||||||||||||||||
Sbjct: 1569 aaaaagaagaaaaatccaag 1550
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>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete sequence
          Length = 165347

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    acaatcagtaaaagttgata 508
              ||||||||||||||||||||
Sbjct: 144388 acaatcagtaaaagttgata 144369
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>gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q24.13, complete
            sequence
          Length = 182016

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  acaatcagtaaaagttgata 508
            ||||||||||||||||||||
Sbjct: 3834 acaatcagtaaaagttgata 3815
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>gb|AC182669.2| Populus trichocarpa clone Pop1-21I14, complete sequence
          Length = 149597

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaaaaagaagaaaaatccaa 114
             ||||||||||||||||||||
Sbjct: 99136 aaaaaagaagaaaaatccaa 99117
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>ref|XM_536835.2| PREDICTED: Canis familiaris hypothetical LOC479707, transcript
            variant 1 (LOC479707), mRNA
          Length = 3626

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  cctgcatttcggttgcattt 263
            ||||||||||||||||||||
Sbjct: 3409 cctgcatttcggttgcattt 3428
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>gb|AC004965.2| Homo sapiens PAC clone RP5-1106H14 from 7, complete sequence
          Length = 170758

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 95    aaaaaagaagaaaaatccaagcct 118
             |||||||||||||| |||||||||
Sbjct: 97237 aaaaaagaagaaaactccaagcct 97214
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>gb|AC069313.5| Homo sapiens BAC clone CTD-2016H9 from 7, complete sequence
          Length = 100679

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    aaaaagaagaaaaatccaag 115
             ||||||||||||||||||||
Sbjct: 99498 aaaaagaagaaaaatccaag 99479
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>gb|AC143356.1| Pan troglodytes BAC clone RP43-64A13 from 7, complete sequence
          Length = 154864

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aaaaagaagaaaaatccaag 115
             ||||||||||||||||||||
Sbjct: 31052 aaaaagaagaaaaatccaag 31071
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>emb|BX016132.1|CNS08KM0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA24AG12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 968

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 86  aaaccaagcaaaaaagaagaaaaa 109
           ||||||||||||||| ||||||||
Sbjct: 700 aaaccaagcaaaaaaaaagaaaaa 723
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>emb|X73141.1|SHTLYCA S.hyodysenteriae gene for tlyC hemolysin
          Length = 2222

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  caagcaaaaaagaagaaaaa 109
           ||||||||||||||||||||
Sbjct: 81  caagcaaaaaagaagaaaaa 100
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>gb|U41547.2| Caenorhabditis elegans cosmid F22A3, complete sequence
          Length = 30097

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aagcaaaaaagaagaaaaat 110
             ||||||||||||||||||||
Sbjct: 23021 aagcaaaaaagaagaaaaat 23002
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>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166083

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    gaaaccaagcaaaaaagaagaaaa 108
             ||||||| ||||||||||||||||
Sbjct: 45898 gaaaccatgcaaaaaagaagaaaa 45875
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>emb|AL645683.7| Mouse DNA sequence from clone RP23-374M7 on chromosome 13 Contains the
             V1ri9 gene for vomeronasal 1 receptor I9 and the gene for
             a novel vomeronasal 1 receptor I (V1ri) family member,
             complete sequence
          Length = 77611

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    aaaccaagcaaaaaagaaga 105
             ||||||||||||||||||||
Sbjct: 60445 aaaccaagcaaaaaagaaga 60464
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>gb|AC182731.2| Pan troglodytes BAC clone CH251-677O10 from chromosome 7, complete
              sequence
          Length = 217081

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 95     aaaaaagaagaaaaatccaagcct 118
              |||||||||||||| |||||||||
Sbjct: 203614 aaaaaagaagaaaactccaagcct 203637
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>emb|CR613464.1| full-length cDNA clone CS0DF036YK13 of Fetal brain of Homo sapiens
            (human)
          Length = 2521

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 96   aaaaagaagaaaaatccaag 115
            ||||||||||||||||||||
Sbjct: 1706 aaaaagaagaaaaatccaag 1687
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>gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, complete sequence
          Length = 182041

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    acaatcagtaaaagttgata 508
              ||||||||||||||||||||
Sbjct: 178207 acaatcagtaaaagttgata 178226
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>gb|AC091953.3| Homo sapiens chromosome 5 clone RP11-417J1, complete sequence
          Length = 172738

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     aaaccaagcaaaaaagaagaaaaa 109
              ||||||||||||||| ||||||||
Sbjct: 166794 aaaccaagcaaaaaaaaagaaaaa 166771
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>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence
          Length = 215314

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   acaatcagtaaaagttgata 508
             ||||||||||||||||||||
Sbjct: 74153 acaatcagtaaaagttgata 74172
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>dbj|AK140859.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130050A15 product:unclassifiable, full
            insert sequence
          Length = 3073

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   aaaaaagaagaaaaatccaa 114
            ||||||||||||||||||||
Sbjct: 2110 aaaaaagaagaaaaatccaa 2091
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>gb|AC093858.2| Homo sapiens BAC clone RP11-535C7 from 4, complete sequence
          Length = 151113

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    gctgttcctttcttcttttt 30
             ||||||||||||||||||||
Sbjct: 69025 gctgttcctttcttcttttt 69006
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>dbj|AK141444.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530021A09
            product:unclassifiable, full insert sequence
          Length = 4563

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ccaagcaaaaaagaagaaaa 108
            ||||||||||||||||||||
Sbjct: 2638 ccaagcaaaaaagaagaaaa 2619
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>gb|AC097634.2| Homo sapiens chromosome 3 clone RP11-154H23, complete sequence
          Length = 193553

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    gaagaaagaatgtcttggct 472
              ||||||||||||||||||||
Sbjct: 134188 gaagaaagaatgtcttggct 134207
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>gb|AC027328.4| Homo sapiens chromosome 5 clone CTD-2136J7, complete sequence
          Length = 88303

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    aaaccaagcaaaaaagaagaaaaa 109
             ||||||||||||||| ||||||||
Sbjct: 80680 aaaccaagcaaaaaaaaagaaaaa 80703
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete
               sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 565     gctggaacgagtgaagctgc 584
               ||||||||||||||||||||
Sbjct: 1277325 gctggaacgagtgaagctgc 1277306
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>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence
          Length = 256298

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    aaaccaagcaaaaaagaagaaaaa 109
             |||||||||||| |||||||||||
Sbjct: 17114 aaaccaagcaaacaagaagaaaaa 17091
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       caagcaaaaaagaagaaaaa 109
                ||||||||||||||||||||
Sbjct: 23458297 caagcaaaaaagaagaaaaa 23458316
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 88       accaagcaaaaaagaagaaaaatc 111
                |||||||||||||||| |||||||
Sbjct: 26716338 accaagcaaaaaagaaaaaaaatc 26716361
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>gb|AC074088.5| Homo sapiens BAC clone RP11-122B24 from 4, complete sequence
          Length = 69463

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    agcaaaaaagaagaaaaatc 111
             ||||||||||||||||||||
Sbjct: 31118 agcaaaaaagaagaaaaatc 31137
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>gb|AC064870.5| Homo sapiens BAC clone RP11-575E20 from 2, complete sequence
          Length = 133478

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    caagcaaaaaagaagaaaaa 109
             ||||||||||||||||||||
Sbjct: 41822 caagcaaaaaagaagaaaaa 41803
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>gb|AC083817.19|AC083817 Mus musculus 1 BAC RP23-470G12 (Roswell Park Cancer Institute Mouse
             BAC) complete sequence
          Length = 204950

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   tcctaaatctagaattaaaa 347
             ||||||||||||||||||||
Sbjct: 27599 tcctaaatctagaattaaaa 27618
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>gb|AC087040.6|AC087040 Mus musculus 1 BAC RP23-269M3 (RPCI Mouse BAC) complete sequence
          Length = 142488

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   tcctaaatctagaattaaaa 347
             ||||||||||||||||||||
Sbjct: 58163 tcctaaatctagaattaaaa 58144
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>gb|AC025295.7|AC025295 Arabidopsis thaliana chromosome 1 BAC T4K22 genomic sequence, complete
             sequence
          Length = 82281

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 86    aaaccaagcaaaaaagaagaaaaa 109
             |||||||| |||||||||||||||
Sbjct: 42292 aaaccaaggaaaaaagaagaaaaa 42269
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>gb|AC107810.8| Mus musculus chromosome 1, clone RP23-68D4, complete sequence
          Length = 160167

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ccaagcaaaaaagaagaaaa 108
              ||||||||||||||||||||
Sbjct: 120324 ccaagcaaaaaagaagaaaa 120305
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>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1301_C12
          Length = 128396

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    caagcaaaaaagaagaaaaa 109
             ||||||||||||||||||||
Sbjct: 18690 caagcaaaaaagaagaaaaa 18709
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>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453G03
          Length = 144480

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    caagcaaaaaagaagaaaaa 109
             ||||||||||||||||||||
Sbjct: 78194 caagcaaaaaagaagaaaaa 78213
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>emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chromosome X, complete
             sequence
          Length = 158108

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    aggaaaccaagcaaaaaaga 102
             ||||||||||||||||||||
Sbjct: 92035 aggaaaccaagcaaaaaaga 92054
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>ref|NM_210558.1| Eremothecium gossypii AER348Cp (AER348C), mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 gctggaacgagtgaagctgc 584
           ||||||||||||||||||||
Sbjct: 450 gctggaacgagtgaagctgc 469
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>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence
          Length = 189805

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    actcagctgagcccagccaa 60
             ||||||||||||||||||||
Sbjct: 89706 actcagctgagcccagccaa 89725
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>emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2552B11 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     actcagctgagcccagccaa 60
              ||||||||||||||||||||
Sbjct: 150407 actcagctgagcccagccaa 150388
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>gb|AC158116.2| Gallus gallus BAC clone CH261-122G21 from chromosome unknown, complete
             sequence
          Length = 213772

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaaaaagaagaaaaatccaa 114
             ||||||||||||||||||||
Sbjct: 97331 aaaaaagaagaaaaatccaa 97312
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>gb|AC133195.4| Mus musculus BAC clone RP23-133F6 from 8, complete sequence
          Length = 214318

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aaaaaagaagaaaaatccaa 114
              ||||||||||||||||||||
Sbjct: 161214 aaaaaagaagaaaaatccaa 161233
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>gb|AC002546.1|AC002546 Homo sapiens chromosome 17, clone 193h18, complete sequence
          Length = 106420

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 35    aaaacgactcagctgagcccagccaacc 62
             ||||| |||||||||||||||| |||||
Sbjct: 97403 aaaaccactcagctgagcccagtcaacc 97376
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>gb|AC155316.6| Mus musculus BAC clone RP23-181P9 from chromosome 5, complete sequence
          Length = 204809

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     aaaagaagaaaaatccaagc 116
              ||||||||||||||||||||
Sbjct: 166755 aaaagaagaaaaatccaagc 166774
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>dbj|AB223056.1| Oryzias latipes gene for SWS2 type opsin SWS2-A, complete cds
          Length = 2324

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  caagcaaaaaagaagaaaaa 109
           ||||||||||||||||||||
Sbjct: 269 caagcaaaaaagaagaaaaa 288
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>gb|AC170864.2| Mus musculus BAC clone RP24-576D1 from chromosome 7, complete sequence
          Length = 208952

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 86     aaaccaagcaaaaaagaagaaaaa 109
              |||||||||||| |||||||||||
Sbjct: 169153 aaaccaagcaaacaagaagaaaaa 169130
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>emb|AL671993.7| Mouse DNA sequence from clone RP23-428E5 on chromosome X, complete
              sequence
          Length = 194106

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     aaaagaagaaaaatccaagc 116
              ||||||||||||||||||||
Sbjct: 157386 aaaagaagaaaaatccaagc 157405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,717,432
Number of Sequences: 3902068
Number of extensions: 6717432
Number of successful extensions: 167646
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167232
Number of HSP's gapped (non-prelim): 414
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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