Clone Name | rbah61f14 |
---|---|
Clone Library Name | barley_pub |
>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial| precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase) Length = 399 Score = 128 bits (321), Expect = 1e-29 Identities = 62/120 (51%), Positives = 90/120 (75%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 ++FEL KNS+RA E + +D+D+PP++++V G ED++IK+SD GGG+ R+ L R+FTY Sbjct: 244 IMFELFKNSMRATVENH-GADEDLPPIKVMVVRGAEDLSIKISDRGGGVSRTILDRLFTY 302 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P +G +AGYG+GLP+SRLYA+YF GD+ ++SMEGYGTDA + L + Sbjct: 303 MYSTAPP-PPRDGTQP--PLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMIFLKAI 359
>PDK2_RAT (Q64536) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 2) (PDK P45) Length = 407 Score = 125 bits (315), Expect = 5e-29 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + +S +PP++I+VA G ED++IK+SD GGG+ + R+F+Y Sbjct: 248 MLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P + + G +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L L Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363 Query: 161 G-DSEE 147 DS E Sbjct: 364 STDSVE 369
>PDK2_MOUSE (Q9JK42) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 2) Length = 407 Score = 125 bits (315), Expect = 5e-29 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + +S +PP++I+VA G ED++IK+SD GGG+ + R+F+Y Sbjct: 248 MLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRRIERLFSY 306 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P + + G +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L L Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363 Query: 161 G-DSEE 147 DS E Sbjct: 364 STDSVE 369
>PDK2_HUMAN (Q15119) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 2) Length = 407 Score = 124 bits (312), Expect = 1e-28 Identities = 64/126 (50%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + +S +PP++++VA G ED++IK+SD GGG+ + R+F+Y Sbjct: 248 MLFELFKNAMRATVESH-ESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P + + G +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L L Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363 Query: 161 G-DSEE 147 DS E Sbjct: 364 STDSVE 369
>PDK_DROME (P91622) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial| precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase) (DmPDK) Length = 413 Score = 124 bits (311), Expect = 2e-28 Identities = 62/127 (48%), Positives = 89/127 (70%), Gaps = 5/127 (3%) Frame = -2 Query: 521 MLFELVKNSLRAVQERY-MDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345 MLFEL KNS+RAV E + D++ +PP+++ + G ED+ +K+SD+GGGI RS ++F Sbjct: 250 MLFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFK 309 Query: 344 YLYSTAKNLPDIEGPSEG----VTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYL 177 Y+YSTA PS+ V +AGYG+GLP+SRLYA+YF GD+ ++S EG+GTDA + Sbjct: 310 YMYSTAPQ------PSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAII 363 Query: 176 HLSRLGD 156 +L L D Sbjct: 364 YLKALSD 370
>PDK1_MOUSE (Q8BFP9) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1) Length = 434 Score = 124 bits (310), Expect = 2e-28 Identities = 63/121 (52%), Positives = 89/121 (73%), Gaps = 1/121 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDV-PPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345 M+FEL KN++RA E + +DK V PP+++ V G ED+T+K+SD GGG+ S + R+F Sbjct: 274 MVFELFKNAMRATMEHH--ADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLSKIDRLFN 331 Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165 Y+YSTA P +E S V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++ Sbjct: 332 YMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKA 389 Query: 164 L 162 L Sbjct: 390 L 390
>PDK3_HUMAN (Q15120) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 3) Length = 406 Score = 123 bits (309), Expect = 3e-28 Identities = 62/120 (51%), Positives = 84/120 (70%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KNS+RA E Y D + P V+ +V G ED++IK+SD GGG+ + R+F Y Sbjct: 244 MLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNY 303 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P +E P+ +AG+G+GLP+SRLYA+YF GDL++ SMEG GTDA ++L L Sbjct: 304 MYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL 361
>PDK3_MOUSE (Q922H2) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 3) Length = 415 Score = 122 bits (305), Expect = 8e-28 Identities = 61/120 (50%), Positives = 84/120 (70%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KNS+RA E + D + P V+ +V G ED++IK+SD GGG+ + R+F Y Sbjct: 244 MLFELFKNSMRATVELHEDKKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNY 303 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P +E P+ +AG+G+GLP+SRLYA+YF GDL++ SMEG GTDA ++L L Sbjct: 304 MYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL 361
>PDK1_RAT (Q63065) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1) (PDK p48) Length = 434 Score = 122 bits (305), Expect = 8e-28 Identities = 62/121 (51%), Positives = 88/121 (72%), Gaps = 1/121 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDV-PPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345 M+FEL KN++RA E + +DK V PP+++ V G ED+T+K+SD GGG+ + R+F Sbjct: 274 MVFELFKNAMRATMEHH--ADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLRKIDRLFN 331 Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165 Y+YSTA P +E S V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++ Sbjct: 332 YMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKA 389 Query: 164 L 162 L Sbjct: 390 L 390
>PDK1_HUMAN (Q15118) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1) Length = 436 Score = 119 bits (299), Expect = 4e-27 Identities = 59/120 (49%), Positives = 85/120 (70%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 M+FEL KN++RA E + + PP+++ V G ED+T+K+SD GGG+ + R+F Y Sbjct: 276 MVFELFKNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNY 334 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA P +E S V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++ L Sbjct: 335 MYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKAL 392
>PDK_CAEEL (Q02332) Probable [pyruvate dehydrogenase [lipoamide]] kinase,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase) Length = 401 Score = 117 bits (292), Expect = 3e-26 Identities = 59/117 (50%), Positives = 84/117 (71%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 M+FEL KN++RA E Y D D+P +++ V G ED++IK+ D GGG+ R+ L R++ Y Sbjct: 244 MMFELFKNAMRATVE-YHGVDDDLPDIKVYVVKGQEDLSIKICDRGGGVSRTILERLYNY 302 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171 +YSTA P +G +AGYG+GLP+SRLYA+YF GDL ++SMEG+GTDA ++L Sbjct: 303 MYSTAPP-PPRDGTQ--APLAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACIYL 356
>PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 116 bits (291), Expect = 3e-26 Identities = 60/120 (50%), Positives = 81/120 (67%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA ER +S + PV +IV G ED+TIK+SD GGG+ R+F+Y Sbjct: 251 MLFELFKNAMRATVER-QESWPSLTPVEVIVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 +YSTA + S +AG+G+GLP+SRLYA+YF GDL + S+ GYGTDA ++L L Sbjct: 310 MYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL 367
>PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 411 Score = 115 bits (288), Expect = 7e-26 Identities = 57/120 (47%), Positives = 81/120 (67%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + ++ + P+ +IV G ED+TIK+SD GGG+ + R+F+Y Sbjct: 251 MLFELFKNAMRATVE-HQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSY 309 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 YSTA + S +AG+G+GLP+SRLYA+YF GDL + S+ GYGTDA ++L L Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL 367
>PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 111 bits (278), Expect = 1e-24 Identities = 58/120 (48%), Positives = 78/120 (65%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + ++ + PV V G ED+TIK+SD GGG+ R+F+Y Sbjct: 251 MLFELFKNAMRATVE-HQENRPSLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 YSTA + S +AG+G+GLP+SRLYA+YF GDL + SM GYGTDA ++L L Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKAL 367
>PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,| mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4) Length = 412 Score = 110 bits (275), Expect = 2e-24 Identities = 58/120 (48%), Positives = 78/120 (65%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 MLFEL KN++RA E + ++ + PV V G ED+TIK+SD GGG+ R+F+Y Sbjct: 251 MLFELFKNAMRATVE-HQENRPFLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 YSTA + S +AG+G+GLP+SRLYA+YF GDL + SM GYGTDA ++L L Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKAL 367
>BCKD_HUMAN (O14874) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]| kinase, mitochondrial precursor (EC 2.7.11.4) (Branched-chain alpha-ketoacid dehydrogenase kinase) (BCKDHKIN) (BCKD-kinase) Length = 412 Score = 103 bits (257), Expect = 3e-22 Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 12/137 (8%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L EL+KN++RA E ++D+ +VP V I +A+ D+ I++SD GGGI L R+ Y Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDY 331 Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198 ++TA+ D+ ++ M G+GFGLP SR YA+Y GG LQ+ S++G Sbjct: 332 HFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391 Query: 197 YGTDAYLHLSRLGDSEE 147 GTD YL L + EE Sbjct: 392 IGTDVYLRLRHIDGREE 408
>BCKD_RAT (Q00972) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]| kinase, mitochondrial precursor (EC 2.7.11.4) (Branched-chain alpha-ketoacid dehydrogenase kinase) (BCKDHKIN) (BCKD-kinase) Length = 412 Score = 103 bits (256), Expect = 4e-22 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 12/137 (8%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L EL+KN++RA E ++D+ +VP V I +A+ D+ I++SD GGGI L R+ Y Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDY 331 Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198 ++TA+ D+ + M G+GFGLP SR YA+Y GG LQ+ S++G Sbjct: 332 HFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391 Query: 197 YGTDAYLHLSRLGDSEE 147 GTD YL L + EE Sbjct: 392 IGTDVYLRLRHIDGREE 408
>BCKD_MOUSE (O55028) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]| kinase, mitochondrial precursor (EC 2.7.11.4) (Branched-chain alpha-ketoacid dehydrogenase kinase) (BCKDHKIN) (BCKD-kinase) Length = 412 Score = 102 bits (255), Expect = 5e-22 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 12/137 (8%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L EL+KN++RA E ++D+ +VP V I +A+ D+ I++SD GGGI L R+ Y Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDY 331 Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198 ++TA+ D+ + M G+GFGLP SR YA+Y GG LQ+ S++G Sbjct: 332 HFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391 Query: 197 YGTDAYLHLSRLGDSEE 147 GTD YL L + EE Sbjct: 392 IGTDVYLRLRHIDGREE 408
>YIE2_YEAST (P40530) Hypothetical 45.4 kDa protein in CBR5-NOT3 intergenic| region Length = 394 Score = 59.7 bits (143), Expect = 5e-09 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRI-IVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345 ++ E+ KN+ A + K+ P+ I ++ +++ +++ D GGGI +F Sbjct: 264 IMTEVFKNAFEA----QIALGKEHMPIEINLLKPDDDELYLRIRDHGGGITPEVEALMFN 319 Query: 344 YLYST-AKNLPDIEG---PSEGVT-MAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAY 180 Y YST + D E P E + ++G GFGLP+ + Y + FGG + + S+ G+GTD Y Sbjct: 320 YSYSTHTQQSADSESTDLPGEQINNVSGMGFGLPMCKTYLELFGGKIDVQSLLGWGTDVY 379 Query: 179 LHL 171 + L Sbjct: 380 IKL 382
>YGF9_YEAST (P53170) Probable protein kinase YGL059W (EC 2.7.11.-)| Length = 491 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -2 Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 G GL + ++YA+Y+ GDL + SM GYGTD L L L Sbjct: 443 GIGLAMCKVYAEYWNGDLSLHSMPGYGTDVVLKLGNL 479 Score = 30.8 bits (68), Expect = 2.4 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVP-PVRIIVADGTEDVTIKVSDEGGGI 375 +L E+++N+ A + Y+ + P P+ + V E ++SD+ GG+ Sbjct: 297 LLGEILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGV 346
>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 43.1 bits (100), Expect = 5e-04 Identities = 34/125 (27%), Positives = 58/125 (46%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L+ L+ N+++ Q+ + VR+ +G + + +V D G GI + L +IF Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 Y ++ G G G GL VSR A+ GGD+ + S +G G+ L + Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506 Query: 161 GDSEE 147 +EE Sbjct: 507 SVAEE 511
>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 43.1 bits (100), Expect = 5e-04 Identities = 34/125 (27%), Positives = 58/125 (46%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L+ L+ N+++ Q+ + VR+ +G + + +V D G GI + L +IF Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 Y ++ G G G GL VSR A+ GGD+ + S +G G+ L + Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506 Query: 161 GDSEE 147 +EE Sbjct: 507 SVAEE 511
>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC| 2.7.13.3) Length = 778 Score = 43.1 bits (100), Expect = 5e-04 Identities = 34/125 (27%), Positives = 58/125 (46%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L+ L+ N+++ Q+ + VR+ +G + + +V D G GI + L +IF Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 Y ++ G G G GL VSR A+ GGD+ + S +G G+ L + Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506 Query: 161 GDSEE 147 +EE Sbjct: 507 SVAEE 511
>AFSQ2_STRCO (Q04943) Signal transduction histidine-protein kinase afsQ2 (EC| 2.7.13.3) Length = 535 Score = 42.0 bits (97), Expect = 0.001 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = -2 Query: 446 PVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMA 279 PVR+ VA ++ I+V D G GI LP +F Y + + P EG G+++A Sbjct: 424 PVRVSVARADHEIVIRVRDNGPGIPEDVLPHVFDRFYKASASRPRSEGSGLGLSIA 479
>VIRAW_AGRTU (P07168) Wide host range virA protein (EC 2.7.13.3) (WHR virA)| Length = 829 Score = 40.8 bits (94), Expect = 0.002 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Frame = -2 Query: 446 PVRIIVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYST-AKNLPDIEGPSEGVTM 282 PV+ I+A G + V + +SD GGGI + LP IF +ST A+N Sbjct: 607 PVKKILAHGVMPPGDYVLLSISDNGGGIPEAVLPHIFEPFFSTRARN------------- 653 Query: 281 AGYGFGLPVSRLYAQYFGGDLQIISMEGYGT--DAYL 177 G G GL + F G + + S G+GT D YL Sbjct: 654 GGTGLGLASVHGHISAFAGYIDVSSTVGHGTRFDIYL 690
>SASA_PROMA (Q7BWI3) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| Length = 381 Score = 40.0 bits (92), Expect = 0.004 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 1/115 (0%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTED-VTIKVSDEGGGIRRSGLPRIFT 345 +L L++N+L+ +D D V I + T V I VSD+G GI RIF Sbjct: 263 VLLNLIENALK------FSNDGDT--VEITMLHRTNQWVQISVSDKGPGIPEEEQQRIF- 313 Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAY 180 L + P +G+G GL V R + GG + ++S G G+ Y Sbjct: 314 --------LDRVRLPQTSNETSGFGIGLSVCRRIVEVHGGKIWVVSQPGEGSCFY 360
>VIRA_AGRT9 (P10799) Wide host range virA protein (EC 2.7.13.3) (WHR virA)| Length = 829 Score = 39.7 bits (91), Expect = 0.005 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Frame = -2 Query: 446 PVRIIVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYST-AKNLPDIEGPSEGVTM 282 PV+ I+A G + V + +SD GGGI + LP IF ++T A+N Sbjct: 607 PVKKILAHGVMPPGDYVLLSISDNGGGIPEAVLPHIFEPFFTTRARN------------- 653 Query: 281 AGYGFGLPVSRLYAQYFGGDLQIISMEGYGT--DAYL 177 G G GL + F G + + S G+GT D YL Sbjct: 654 GGTGLGLASVHGHISAFAGYIDVSSTVGHGTRFDIYL 690
>PHOR_BACSU (P23545) Alkaline phosphatase synthesis sensor protein phoR (EC| 2.7.13.3) Length = 579 Score = 39.3 bits (90), Expect = 0.007 Identities = 28/96 (29%), Positives = 43/96 (44%) Frame = -2 Query: 443 VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264 V I V +D+ I+V+D G GI++ +PRIF Y K+ G G G G Sbjct: 489 VAINVKPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSG--------GTGLG 540 Query: 263 LPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRLGD 156 L + + + G + + S G GT + L R + Sbjct: 541 LAIVKHLIEAHEGKIDVTSELGRGTVFTVTLKRAAE 576
>YYCG_BACSU (Q45614) Sensor protein yycG (EC 2.7.13.3)| Length = 611 Score = 38.9 bits (89), Expect = 0.009 Identities = 26/83 (31%), Positives = 39/83 (46%) Frame = -2 Query: 437 IIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLP 258 I V + E + I V DEG GI + + ++F Y K + + G G GL Sbjct: 518 IDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDK--------ARTRKLGGTGLGLA 569 Query: 257 VSRLYAQYFGGDLQIISMEGYGT 189 +++ Q GGD+ S+EG GT Sbjct: 570 IAKEMVQAHGGDIWADSIEGKGT 592
>ZRAS_ECO57 (Q8X614) Sensor protein zraS (EC 2.7.13.3)| Length = 458 Score = 37.7 bits (86), Expect = 0.019 Identities = 28/110 (25%), Positives = 46/110 (41%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L N+++A+ + + + + ++ V I V+D G GI L IFT Sbjct: 353 VLLNLYLNAIQAIGQHGV--------ISVTASESGAGVKISVTDSGKGIAADQLEAIFTP 404 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192 ++T G G GL V + GG +Q+ S+EG G Sbjct: 405 YFTTKAE--------------GTGLGLAVVHNIVEQHGGTIQVASLEGKG 440
>ZRAS_ECOLI (P14377) Sensor protein zraS (EC 2.7.13.3)| Length = 465 Score = 37.7 bits (86), Expect = 0.019 Identities = 30/117 (25%), Positives = 48/117 (41%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L N+++A+ + + + + ++ V I V+D G GI L IFT Sbjct: 360 VLLNLYLNAIQAIGQHGV--------ISVTASESGAGVKISVTDSGKGIAADQLDAIFTP 411 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171 ++T G G GL V + GG +Q+ S EG G+ L L Sbjct: 412 YFTTKAE--------------GTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWL 454
>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)| Length = 735 Score = 37.4 bits (85), Expect = 0.025 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Frame = -2 Query: 464 SDKDVPPVRIIVADGTED-VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGV 288 SD PP +V G+ + +KV D G GI +P++FT T G Sbjct: 489 SDNRAPPDFFVVPTGSHFYLRVKVKDLGAGINPQDIPKLFTKFAQTQSLATRSSG----- 543 Query: 287 TMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192 G G GL +S+ + G++ I S EG G Sbjct: 544 ---GSGLGLAISKRFVNLMEGNIWIES-EGVG 571
>CREC_ECOLI (P08401) Sensor protein creC (EC 2.7.13.3)| Length = 474 Score = 36.6 bits (83), Expect = 0.043 Identities = 29/84 (34%), Positives = 37/84 (44%) Frame = -2 Query: 416 EDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQ 237 E VT+KV D G GI L RIF YS LP G G GL A+ Sbjct: 398 EHVTLKVLDTGSGIPDYALSRIFERFYS----LPRANGQKSS------GLGLAFVSEVAR 447 Query: 236 YFGGDLQIISMEGYGTDAYLHLSR 165 F G++ + +++ G A L L R Sbjct: 448 LFNGEVTLRNVQEGGVLASLRLHR 471
>ZRAS_SALTY (P37461) Sensor protein zraS (EC 2.7.13.3)| Length = 465 Score = 36.6 bits (83), Expect = 0.043 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = -2 Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243 GT+ V I V+D G GI L IFT ++T + G G GL V + Sbjct: 388 GTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKAD--------------GTGLGLAVVQNI 433 Query: 242 AQYFGGDLQIISMEGYG 192 + GG +++ S+EG G Sbjct: 434 IEQHGGAIKVKSIEGKG 450
>ZRAS_SALTI (Q8Z332) Sensor protein zraS (EC 2.7.13.3)| Length = 465 Score = 36.6 bits (83), Expect = 0.043 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = -2 Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243 GT+ V I V+D G GI L IFT ++T + G G GL V + Sbjct: 388 GTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKAD--------------GTGLGLAVVQNI 433 Query: 242 AQYFGGDLQIISMEGYG 192 + GG +++ S+EG G Sbjct: 434 IEQHGGAIKVKSIEGKG 450
>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 36.2 bits (82), Expect = 0.056 Identities = 25/80 (31%), Positives = 34/80 (42%) Frame = -2 Query: 410 VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231 V VSD G GI + ++F K + G +E G G GL +SR + Sbjct: 872 VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924 Query: 230 GGDLQIISMEGYGTDAYLHL 171 GG L + S G GT + L Sbjct: 925 GGTLVMRSAPGVGTTVSVDL 944
>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 36.2 bits (82), Expect = 0.056 Identities = 25/80 (31%), Positives = 34/80 (42%) Frame = -2 Query: 410 VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231 V VSD G GI + ++F K + G +E G G GL +SR + Sbjct: 872 VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924 Query: 230 GGDLQIISMEGYGTDAYLHL 171 GG L + S G GT + L Sbjct: 925 GGTLVMRSAPGVGTTVSVDL 944
>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 36.2 bits (82), Expect = 0.056 Identities = 25/80 (31%), Positives = 34/80 (42%) Frame = -2 Query: 410 VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231 V VSD G GI + ++F K + G +E G G GL +SR + Sbjct: 872 VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924 Query: 230 GGDLQIISMEGYGTDAYLHL 171 GG L + S G GT + L Sbjct: 925 GGTLVMRSAPGVGTTVSVDL 944
>DPIB_ECOLI (P77510) Sensor kinase dpiB (EC 2.7.13.3) (Sensor kinase citA)| Length = 552 Score = 35.0 bits (79), Expect = 0.12 Identities = 29/107 (27%), Positives = 47/107 (43%) Frame = -2 Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330 +V N L E + SD+ V + ++D +DV I+V+D+G G+ S +IF ST Sbjct: 436 IVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVST 495 Query: 329 AKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189 + P +G GL + Y GG + + + GT Sbjct: 496 RADEP-----------GEHGIGLYLIASYVTRCGGVITLEDNDPCGT 531
>TOP6B_HALSA (Q9HR31) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)| (TopoVI-B) Length = 804 Score = 34.3 bits (77), Expect = 0.21 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Frame = -2 Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIF-TYLY 336 E V N+L A +E + +P + + +++G + T+ V D G GI + +P+IF LY Sbjct: 54 EAVDNALDATEEAGI-----LPDIYVEISEGRDYYTLIVEDNGPGITNAQIPKIFGKLLY 108 Query: 335 STAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 + + + +G+ G+ + LY+Q G Sbjct: 109 GSRFHAREQSRGQQGI-------GISAAVLYSQLTSG 138
>VIRAL_AGRTU (P07167) Limited host range virA protein (EC 2.7.13.3) (LHR virA)| Length = 835 Score = 34.3 bits (77), Expect = 0.21 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%) Frame = -2 Query: 434 IVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGF 267 ++A+GT + + + D GGGI ++ LP IF + T G G Sbjct: 615 VLANGTIPAGDYILLSFEDNGGGIGQAALPHIFEPFFRTR------------AQCGGTGL 662 Query: 266 GLPVSRLYAQYFGGDLQIISMEGYGT--DAYLHLS 168 GL + G + +IS G GT D YL S Sbjct: 663 GLSTVHGHVSAMAGFVDVISTVGRGTRFDIYLPTS 697
>BPHY_DEIRA (Q9RZA4) Bacteriophytochrome (EC 2.7.13.3) (Phytochrome-like| protein) Length = 755 Score = 33.9 bits (76), Expect = 0.28 Identities = 25/73 (34%), Positives = 34/73 (46%) Frame = -2 Query: 407 TIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFG 228 +I VSD+G GI RIF L+ +L + G G GLP+ R A+ G Sbjct: 675 SIAVSDQGAGIAPEYQERIFL-LFQRLGSLDEA---------LGNGLGLPLCRKIAELHG 724 Query: 227 GDLQIISMEGYGT 189 G L + S G G+ Sbjct: 725 GTLTVESAPGEGS 737
>TOP6B_METAC (Q8TQF7) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)| (TopoVI-B) Length = 621 Score = 33.9 bits (76), Expect = 0.28 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 1/114 (0%) Frame = -2 Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYS 333 E V NSL A +E + D V R G + VT+ + D G GI R +P++F Sbjct: 44 EAVDNSLDACEEAGILPDILVQVERT----GQDYVTVIIEDNGPGIVREQIPKVF----- 94 Query: 332 TAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG-DLQIISMEGYGTDAYLH 174 AK L + + G G+ + LYAQ G +I+S G A+ + Sbjct: 95 -AKLLYGSRFHALKQSRGQQGIGISAAVLYAQMTAGRHTKILSKTGSNVPAHYY 147
>SASA_SYNP7 (Q06904) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)| (Synechococcus adaptive sensor protein A) Length = 387 Score = 33.5 bits (75), Expect = 0.36 Identities = 26/77 (33%), Positives = 35/77 (45%) Frame = -2 Query: 419 TEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYA 240 ++ V I +SD G GI R L IF KNL + S + GYG GL V + Sbjct: 306 SQKVQISISDTGSGIPRDQLSVIF-------KNLVRL---SRDSSQEGYGIGLSVCQRIV 355 Query: 239 QYFGGDLQIISMEGYGT 189 Q G + + S G G+ Sbjct: 356 QAHFGRIWVASELGQGS 372
>KDPD_MYCTU (P96372) Sensor protein kdpD (EC 2.7.13.3)| Length = 860 Score = 33.1 bits (74), Expect = 0.47 Identities = 23/92 (25%), Positives = 36/92 (39%) Frame = -2 Query: 443 VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264 VR+ E V I V DEG G+ R ++F + P + G G G Sbjct: 773 VRVNAGRVRERVLINVIDEGPGVPRGTEEQLFA----------PFQRPGDHDNTTGVGLG 822 Query: 263 LPVSRLYAQYFGGDLQIISMEGYGTDAYLHLS 168 + V+R + + GG + G G + L+ Sbjct: 823 MSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854
>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 33.1 bits (74), Expect = 0.47 Identities = 22/71 (30%), Positives = 31/71 (43%) Frame = -2 Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 +KV D G GI +P+IFT T G G G GL +S+ + G Sbjct: 509 VKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSG--------GSGLGLAISKRFVNLMEG 560 Query: 224 DLQIISMEGYG 192 ++ I S +G G Sbjct: 561 NIWIES-DGLG 570
>FIXL_RHIME (P10955) Sensor protein fixL (EC 2.7.13.3)| Length = 505 Score = 33.1 bits (74), Expect = 0.47 Identities = 27/110 (24%), Positives = 48/110 (43%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L++N++ A++ D+ +R + AD E V + V D GGGI ++F Sbjct: 396 VLINLMRNAIEAMRH----VDRRELTIRTMPADPGE-VAVVVEDTGGGIPEEVAGQLFKP 450 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192 +T + G G GL +S+ + GG++ + E G Sbjct: 451 FVTTKAS--------------GMGIGLSISKRIVEAHGGEMTVSKNEAGG 486
>KINC_BACSU (P39764) Sporulation kinase C (EC 2.7.13.3)| Length = 428 Score = 33.1 bits (74), Expect = 0.47 Identities = 31/123 (25%), Positives = 48/123 (39%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 + ++KN + A+ + + V I A I V DEG G+ + L +I Sbjct: 328 VFINIIKNGIEAMPKGGV--------VTISTAKTASHAVISVKDEGNGMPQEKLKQIGKP 379 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162 YST + G G GLP+ + G+L+I S G G+ + L Sbjct: 380 FYSTKEK--------------GTGLGLPICLRILKEHDGELKIESEAGKGSVFQVVLPLK 425 Query: 161 GDS 153 DS Sbjct: 426 SDS 428
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 32.3 bits (72), Expect = 0.81 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 3/120 (2%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTED---VTIKVSDEGGGIRRSGLPRI 351 +L LV N+++ +E + + R ++ D TE+ + I V D G G+ + + Sbjct: 394 ILTNLVSNAIKFTREGTIVA-------RAMLEDETEEHAQLRISVQDTGIGLSSQDVRAL 446 Query: 350 FTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171 F +L G G G GL +S+ + GG++ + S G G++ ++ L Sbjct: 447 FQAFSQADNSLSRQPG--------GTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISL 498
>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 968 Score = 32.0 bits (71), Expect = 1.1 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -2 Query: 269 FGLPVSRLYAQYFGGD 222 FG+PV RLY YFGGD Sbjct: 126 FGIPVERLYVTYFGGD 141
>CHVG_AGRT5 (Q07737) Sensor protein chvG (EC 2.7.13.3)| Length = 596 Score = 32.0 bits (71), Expect = 1.1 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = -2 Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 ++V D G GI+ + RIF Y+ + P EG + G GL +SR A+ GG Sbjct: 514 VQVEDNGPGIQAEDIDRIFERFYT---DRPASEGFGQ-----NSGLGLSISRQIAEAHGG 565 Query: 224 DLQ 216 L+ Sbjct: 566 SLR 568
>SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 968 Score = 31.6 bits (70), Expect = 1.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 269 FGLPVSRLYAQYFGGD 222 FG+P+ RLY YFGGD Sbjct: 126 FGIPIERLYVTYFGGD 141
>SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) (NY-REN-42 antigen) Length = 968 Score = 31.6 bits (70), Expect = 1.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 269 FGLPVSRLYAQYFGGD 222 FG+P+ RLY YFGGD Sbjct: 126 FGIPIERLYVTYFGGD 141
>IRLS_BURPS (O31396) Sensor protein irlS (EC 2.7.13.3)| Length = 464 Score = 31.2 bits (69), Expect = 1.8 Identities = 22/73 (30%), Positives = 29/73 (39%) Frame = -2 Query: 443 VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264 + I A + TI VSD G GI RIF Y P+ + +G G G Sbjct: 377 ITIECAQAADAATISVSDTGRGIEAPHRERIFERFYRV--------DPARHNSASGTGLG 428 Query: 263 LPVSRLYAQYFGG 225 L + R + GG Sbjct: 429 LAIVRSIMENHGG 441
>DIVJ_CAUCR (Q03228) Histidine protein kinase divJ (EC 2.7.13.3)| Length = 597 Score = 30.8 bits (68), Expect = 2.4 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Frame = -2 Query: 434 IVADGTEDVT-IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLP 258 + A G + V I V+D G GI L R+ P + G G GL Sbjct: 470 VTAHGYDGVLEIVVADTGVGISPEDLERL---------GRPYEQAGGAEQRARGTGLGLS 520 Query: 257 VSRLYAQYFGGDLQIISMEGYGTDAYLHL 171 + R +AQ GG++ I S G GT + L Sbjct: 521 LVRAFAQLHGGEMVIESRLGAGTTVSVRL 549
>TOP6B_METMA (Q8PUB8) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)| (TopoVI-B) Length = 621 Score = 30.8 bits (68), Expect = 2.4 Identities = 29/96 (30%), Positives = 42/96 (43%) Frame = -2 Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYS 333 E V N+L A +E + D V R G + VT+ + D G GI R +P++F Sbjct: 44 EAVDNALDACEEAGILPDILVQVERT----GPDYVTVIIEDNGPGIVREQIPKVF----- 94 Query: 332 TAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 AK L + + G G+ + LYAQ G Sbjct: 95 -AKLLYGSRFHALKQSRGQQGIGISAAVLYAQMTAG 129
>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.7) (Alanine--tRNA ligase) (AlaRS) Length = 1003 Score = 30.8 bits (68), Expect = 2.4 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 269 FGLPVSRLYAQYFGGD 222 +GLP R+YA YFGGD Sbjct: 180 YGLPTDRIYATYFGGD 195
>ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)| Length = 740 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/87 (26%), Positives = 36/87 (41%) Frame = -2 Query: 452 VPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGY 273 VP + +D + ++V D G GI +P++FT T GP G Sbjct: 497 VPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTT------VGPRNS---CGS 547 Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYG 192 G GL + + + G + + S EG G Sbjct: 548 GLGLAICKRFVNLMEGHIWLES-EGLG 573
>ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm-ETR1)| Length = 740 Score = 30.8 bits (68), Expect = 2.4 Identities = 23/87 (26%), Positives = 36/87 (41%) Frame = -2 Query: 452 VPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGY 273 VP + +D + ++V D G GI +P++FT T GP G Sbjct: 497 VPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTT------VGPRNS---GGS 547 Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYG 192 G GL + + + G + + S EG G Sbjct: 548 GLGLAICKRFVNLMEGHIWLES-EGLG 573
>CHVG_RHIME (P72292) Sensor protein chvG (EC 2.7.13.3) (Histidine kinase| sensory protein exoS) Length = 577 Score = 30.8 bits (68), Expect = 2.4 Identities = 21/69 (30%), Positives = 30/69 (43%) Frame = -2 Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 + V D G GI+ + RIF Y+ D S G GL +SR A+ GG Sbjct: 497 VYVEDNGPGIQAEDIDRIFERFYTDRPEGEDFGQNS--------GLGLSISRQIAEAHGG 548 Query: 224 DLQIISMEG 198 L+ ++ G Sbjct: 549 TLRAENIAG 557
>TOP6B_METJA (Q58434) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)| (TopoVI-B) Length = 660 Score = 30.4 bits (67), Expect = 3.1 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVAD-GTEDVTIKVSDEGGGIRRSGLPRIFT 345 ++ ELV NSL A +E + +P +++ + G + + V D G GI +P++F Sbjct: 41 IIHELVTNSLDACEEAGI-----LPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVFG 95 Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQY-FGGDLQIISMEGYG 192 + + +K I+ + G G L++Q G L+II+ G G Sbjct: 96 KMLAGSKMHRFIQSRGQ------QGIGAAGVLLFSQITTGKPLKIITSTGDG 141
>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)| (EC 3.1.3.-) Length = 849 Score = 30.4 bits (67), Expect = 3.1 Identities = 29/116 (25%), Positives = 49/116 (42%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 ++F L++N++ Y DS D + I G + T+ D G GI + +IF Sbjct: 582 VIFNLIRNAIY-----YFDSYPD-SQIEISTKTGPYENTLIFRDTGPGIDETISHKIFDD 635 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLH 174 +S K+ G G GL + + FGG ++ S G T+ +L+ Sbjct: 636 FFSYQKS-------------GGSGLGLGYCQRVMRSFGGRIECKSKLGTFTEFHLY 678
>FIXL_AZOCA (P26489) Sensor protein fixL (EC 2.7.13.3)| Length = 504 Score = 30.4 bits (67), Expect = 3.1 Identities = 30/111 (27%), Positives = 47/111 (42%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L++N+L A+ MD+ + V+ A+ + VT+ V D G GI ++FT Sbjct: 396 VLLNLMRNALEAM----MDASRRQLLVQTTPAED-DMVTVSVCDTGHGISDEMRAQLFTP 450 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189 +T G G GL +SR + GG + G GT Sbjct: 451 FVTTKAQ--------------GMGVGLSISRTIIEAHGGRIWAEPNAGGGT 487
>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)| Length = 740 Score = 30.4 bits (67), Expect = 3.1 Identities = 20/85 (23%), Positives = 33/85 (38%) Frame = -2 Query: 461 DKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTM 282 D P + +D + ++V D G GI +P++FT + P Sbjct: 494 DPRAPDFFPVSSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQ--------PVATKNS 545 Query: 281 AGYGFGLPVSRLYAQYFGGDLQIIS 207 G G GL +S+ + G + I S Sbjct: 546 GGSGLGLAISKRFVNLMDGHIWIDS 570
>ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase atoS (EC| 2.7.13.3) Length = 608 Score = 30.4 bits (67), Expect = 3.1 Identities = 20/71 (28%), Positives = 31/71 (43%) Frame = -2 Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 I + D G GI S +IF ++T + G G GL +S+ G Sbjct: 535 ISIEDNGCGIDLSLQKKIFDPFFTTKAS--------------GTGLGLALSQRIINAHQG 580 Query: 224 DLQIISMEGYG 192 D+++ S+ GYG Sbjct: 581 DIRVASLPGYG 591
>DCTB_RHIME (P13633) C4-dicarboxylate transport sensor protein dctB (EC| 2.7.13.3) Length = 621 Score = 30.4 bits (67), Expect = 3.1 Identities = 28/105 (26%), Positives = 47/105 (44%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L++N+L A+ DS+ VR A G + + V+D G GI +FT Sbjct: 523 VLINLLQNALEAIG----DSEDGAIQVRCEEAAG--GIALTVADNGPGIAADVREELFTP 576 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIIS 207 ++T+K G G GL +S+ +GG +++ S Sbjct: 577 -FNTSKE-------------DGLGLGLAISKEIVSDYGGTIEVES 607
>EFG2_PELCD (Q3A6Q0) Elongation factor G 2 (EF-G 2)| Length = 692 Score = 30.0 bits (66), Expect = 4.0 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = -2 Query: 506 VKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEG 384 V+N L AV + YM S DVP + +V D E++T D+G Sbjct: 268 VQNLLDAVID-YMPSPVDVPAITGVVPDTEEEITRPAGDDG 307
>US12_HCMVA (P09721) Hypothetical protein HVLF6| Length = 281 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = -3 Query: 298 VKE*LWLDMVLDFQLVAFMRNISVAT---YKSYPWRDTAPMLTSTCHGWET 155 V+ LW MV + V F + ++AT + PWR TAP L T W T Sbjct: 46 VQHFLW--MVRLYGTVVFQTSATIATTILFMLIPWRVTAPYLRDTLPFWST 94
>CITA_KLEPN (P52687) Sensor kinase citA (EC 2.7.13.3)| Length = 547 Score = 30.0 bits (66), Expect = 4.0 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Frame = -2 Query: 437 IIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAG---YGF 267 +I +DG E V I+++D+G GI + RIF GVT + +G Sbjct: 464 LINSDGQE-VIIEIADQGCGIDEALRDRIF----------------ERGVTSSASKDHGI 506 Query: 266 GLPVSRLYAQYFGGDLQIISMEGYGT--DAYLHLSR 165 GL + R Y + GG + + + +GT Y+ L+R Sbjct: 507 GLWLVRSYVEQAGGSIVVENNIPFGTIFTLYIPLTR 542
>DCTS_BACHD (Q9K997) Probable C4-dicarboxylate sensor kinase (EC 2.7.13.3)| Length = 532 Score = 30.0 bits (66), Expect = 4.0 Identities = 27/115 (23%), Positives = 49/115 (42%) Frame = -2 Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330 L+ NSL A D +K V + + + + + I+V D G GIR ++F +ST Sbjct: 432 LIDNSLDAFSST-QDQNKTV---HVFIGEENDFLKIRVRDNGEGIREEVREKMFVRGFST 487 Query: 329 AKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165 + +G G GL + + + G +++ S GT ++L + Sbjct: 488 K-------------STSGRGIGLFLIQAIVERVEGKIEVESELNIGTTFSIYLPK 529
>CITS_BACSU (O34427) Sensor protein citS (EC 2.7.13.3)| Length = 542 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = -2 Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330 L+ N+ AV E+ V V + D D+ I+VSD G G+ + +F YS+ Sbjct: 432 LIDNAFEAVAEQ------SVKEVLFFITDMGHDIVIEVSDTGPGVPPEKIEAVFERGYSS 485
>YCBM_BACSU (P42245) Hypothetical sensor-like histidine kinase ycbM (EC| 2.7.13.3) Length = 158 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/83 (25%), Positives = 34/83 (40%) Frame = -2 Query: 410 VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231 + I V D G GI + R+F LY+ + S G G GL +++ + Sbjct: 82 IAITVWDRGKGISETDQQRVFERLYTLEE--------SRNKAFQGSGLGLTITKRLTEKM 133 Query: 230 GGDLQIISMEGYGTDAYLHLSRL 162 GG + + S T + L R+ Sbjct: 134 GGIISVQSKPYERTAFTITLKRM 156
>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)| (EC 3.1.3.-) Length = 858 Score = 29.6 bits (65), Expect = 5.3 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 10/121 (8%) Frame = -2 Query: 521 MLFELVKNS----------LRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIR 372 +LF LV N+ L A E++ +D V + +++SD G GI Sbjct: 601 ILFNLVSNAVKFTPSGCVRLHAELEQFYGADNSV-------------LVVEISDTGIGIE 647 Query: 371 RSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192 L +F E + G G GL + + GD+Q+ S +G G Sbjct: 648 SDKLDEMFEPFVQ--------EEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQG 699 Query: 191 T 189 T Sbjct: 700 T 700
>Y3189_ACIAD (Q6F7U1) Hypothetical UPF0350 protein ACIAD3189| Length = 85 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = +3 Query: 48 LKQYLQTSTGITISKSSLITEIVSEQEGPLRQWLL*VSQP*QVEV 182 +K Y T+ S+ +L E+V++++ L W + VS+P QVE+ Sbjct: 31 VKNYYLTAPA---SEKALFAELVAQEDPDLLDWFMEVSEPPQVEL 72
>PAX8_RAT (P51974) Paired box protein Pax-8| Length = 458 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 56 IFANQHGDYN-KQEQPNYRNCIRTGGAIKAMAPLSLPAVTSGGKHRCRIPPW 208 + A+ H Y KQE P + T ++ + A L L V SGG +PP+ Sbjct: 299 VVADPHSPYAIKQETPELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVPPF 350
>TRPM3_HUMAN (Q9HCF6) Transient receptor potential cation channel subfamily M| member 3 (Long transient receptor potential channel 3) (LTrpC3) (Melastatin-2) (MLSN2) Length = 1732 Score = 29.3 bits (64), Expect = 6.9 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 13/60 (21%) Frame = -2 Query: 458 KDVPPVRIIVADGT---EDVTI---KVSDEGGGIRRS-------GLPRIFTYLYSTAKNL 318 +D PPV ++V DG+ D+ K S+EGG I S + + FTY + A++L Sbjct: 377 RDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHL 436
>FIXL_BRAJA (P23222) Sensor protein fixL (EC 2.7.13.3)| Length = 505 Score = 29.3 bits (64), Expect = 6.9 Identities = 23/99 (23%), Positives = 42/99 (42%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L +N+L A+ + +++ AD + + ++VSD G G + +P +F Sbjct: 402 VLVNLFRNALEAMAQ---SQRRELVVTNTPAAD--DMIEVEVSDTGSGFQDDVIPNLFQT 456 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 ++T G G GL +SR + GG Sbjct: 457 FFTTKD--------------TGMGVGLSISRSIIEAHGG 481
>DCTB_RHILE (P10047) C4-dicarboxylate transport sensor protein dctB (EC| 2.7.13.3) Length = 622 Score = 29.3 bits (64), Expect = 6.9 Identities = 28/108 (25%), Positives = 47/108 (43%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342 +L L++N+L AV + + V I + VT+ V+D G GI +FT Sbjct: 523 VLINLLQNALEAVAPKAGEGR-----VEIRTSTDAGMVTVTVADNGPGIPTEIRKGLFTP 577 Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198 ++T+K +G G GL +S+ +GG + + S G Sbjct: 578 -FNTSKE-------------SGLGLGLVISKDIVGDYGGRMDVASDSG 611
>XYNA_BACHD (P07528) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 396 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRS 366 +L E ++N ++ V ERY D DV + DV +V D+GGG+R S Sbjct: 167 LLLERMENHIKTVVERYKD---DVT---------SWDVVNEVIDDGGGLRES 206
>TORS_ECOLI (P39453) Sensor protein torS (EC 2.7.13.3)| Length = 914 Score = 29.3 bits (64), Expect = 6.9 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 2/119 (1%) Frame = -2 Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGT--EDVTIKVSDEGGGIRRSGLPRIF 348 ++ L+ N+LR E Y II+ T E ++V D G GI + L IF Sbjct: 565 VITNLLSNALRFTDEGY-----------IILRSRTDGEQWLVEVEDSGCGIDPAKLAEIF 613 Query: 347 TYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171 + G G GL +S AQ GG+L S G+ L L Sbjct: 614 QPFVQVSGK------------RGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRL 660
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/34 (35%), Positives = 21/34 (61%) Frame = +3 Query: 45 PLKQYLQTSTGITISKSSLITEIVSEQEGPLRQW 146 PL L+ S ++ + L+T+I+ ++EG LR W Sbjct: 679 PLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDW 712
>ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)| Length = 741 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/71 (29%), Positives = 29/71 (40%) Frame = -2 Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225 ++V D G GI +PR+FT T P G G GL + + + G Sbjct: 513 VQVKDSGLGINPQDIPRLFTKFAQTQ--------PVATKNSGGSGLGLAICKRFVNLMEG 564 Query: 224 DLQIISMEGYG 192 + I S EG G Sbjct: 565 HIWIDS-EGPG 574
>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 2) Length = 489 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = -2 Query: 506 VKNSLRAVQE--RYMDSDKDVPPVRIIVADGTEDVTIKVSDEGG 381 +KN L +E + +++ +VPPV IV+DG T+ V++E G Sbjct: 97 MKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELG 140
>ZRAS_KLEOX (Q9APE0) Sensor protein zraS (EC 2.7.13.3)| Length = 462 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/77 (28%), Positives = 30/77 (38%) Frame = -2 Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243 G V + V+D G G+ L IFT +ST + G G GL V + Sbjct: 382 GDGRVKVSVADSGKGMTAEQLQAIFTPYFSTKAD--------------GTGLGLAVVQNI 427 Query: 242 AQYFGGDLQIISMEGYG 192 + GG + S G G Sbjct: 428 VEQHGGTIDAESAPGKG 444
>EFG_GEOKA (Q5L400) Elongation factor G (EF-G)| Length = 692 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 473 YMDSDKDVPPVRIIVADGTEDVTIKVSDE 387 Y+ S D+P +R +V D E+VT + SD+ Sbjct: 277 YLPSPVDIPAIRGVVPDTEEEVTREASDD 305
>DCTS_BACSU (P96601) Probable C4-dicarboxylate sensor kinase (EC 2.7.13.3)| Length = 535 Score = 28.9 bits (63), Expect = 9.0 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%) Frame = -2 Query: 524 LMLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDV-TIKVSDEGGGIRRSGLPRIF 348 ++L L++N+ + E DK + I + T+D+ I + D G GI + +PR++ Sbjct: 424 VLLGNLIENAFGSF-ETVQSEDKRID----ISIEQTDDILAILIEDNGCGIEPTHMPRLY 478 Query: 347 TYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189 ++ K G G+GL + + G +++ S G GT Sbjct: 479 DKGFTVNKT-------------GGTGYGLYLVKQIIDKGSGTIEVDSHAGQGT 518 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,382,191 Number of Sequences: 219361 Number of extensions: 1619607 Number of successful extensions: 4539 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 4364 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4497 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)