Clone Information

BLAST Search Result

Clone Name	rbah61f14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, ...	128	1e-29
2	PDK2_RAT (Q64536) [Pyruvate dehydrogenase [lipoamide]] kinase is...	125	5e-29
3	PDK2_MOUSE (Q9JK42) [Pyruvate dehydrogenase [lipoamide]] kinase ...	125	5e-29
4	PDK2_HUMAN (Q15119) [Pyruvate dehydrogenase [lipoamide]] kinase ...	124	1e-28
5	PDK_DROME (P91622) [Pyruvate dehydrogenase [lipoamide]] kinase, ...	124	2e-28
6	PDK1_MOUSE (Q8BFP9) [Pyruvate dehydrogenase [lipoamide]] kinase ...	124	2e-28
7	PDK3_HUMAN (Q15120) [Pyruvate dehydrogenase [lipoamide]] kinase ...	123	3e-28
8	PDK3_MOUSE (Q922H2) [Pyruvate dehydrogenase [lipoamide]] kinase ...	122	8e-28
9	PDK1_RAT (Q63065) [Pyruvate dehydrogenase [lipoamide]] kinase is...	122	8e-28
10	PDK1_HUMAN (Q15118) [Pyruvate dehydrogenase [lipoamide]] kinase ...	119	4e-27
11	PDK_CAEEL (Q02332) Probable [pyruvate dehydrogenase [lipoamide]]...	117	3e-26
12	PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase ...	116	3e-26
13	PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase ...	115	7e-26
14	PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase ...	111	1e-24
15	PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase is...	110	2e-24
16	BCKD_HUMAN (O14874) [3-methyl-2-oxobutanoate dehydrogenase [lipo...	103	3e-22
17	BCKD_RAT (Q00972) [3-methyl-2-oxobutanoate dehydrogenase [lipoam...	103	4e-22
18	BCKD_MOUSE (O55028) [3-methyl-2-oxobutanoate dehydrogenase [lipo...	102	5e-22
19	YIE2_YEAST (P40530) Hypothetical 45.4 kDa protein in CBR5-NOT3 i...	60	5e-09
20	YGF9_YEAST (P53170) Probable protein kinase YGL059W (EC 2.7.11.-)	44	3e-04
21	ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein a...	43	5e-04
22	ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein a...	43	5e-04
23	ARCB_ECO57 (P58363) Aerobic respiration control sensor protein a...	43	5e-04
24	AFSQ2_STRCO (Q04943) Signal transduction histidine-protein kinas...	42	0.001
25	VIRAW_AGRTU (P07168) Wide host range virA protein (EC 2.7.13.3) ...	41	0.002
26	SASA_PROMA (Q7BWI3) Adaptive-response sensory-kinase sasA (EC 2....	40	0.004
27	VIRA_AGRT9 (P10799) Wide host range virA protein (EC 2.7.13.3) (...	40	0.005
28	PHOR_BACSU (P23545) Alkaline phosphatase synthesis sensor protei...	39	0.007
29	YYCG_BACSU (Q45614) Sensor protein yycG (EC 2.7.13.3)	39	0.009
30	ZRAS_ECO57 (Q8X614) Sensor protein zraS (EC 2.7.13.3)	38	0.019
31	ZRAS_ECOLI (P14377) Sensor protein zraS (EC 2.7.13.3)	38	0.019
32	ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)	37	0.025
33	CREC_ECOLI (P08401) Sensor protein creC (EC 2.7.13.3)	37	0.043
34	ZRAS_SALTY (P37461) Sensor protein zraS (EC 2.7.13.3)	37	0.043
35	ZRAS_SALTI (Q8Z332) Sensor protein zraS (EC 2.7.13.3)	37	0.043
36	BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC ...	36	0.056
37	BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC ...	36	0.056
38	BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC ...	36	0.056
39	DPIB_ECOLI (P77510) Sensor kinase dpiB (EC 2.7.13.3) (Sensor kin...	35	0.12
40	TOP6B_HALSA (Q9HR31) Type II DNA topoisomerase VI subunit B (EC ...	34	0.21
41	VIRAL_AGRTU (P07167) Limited host range virA protein (EC 2.7.13....	34	0.21
42	BPHY_DEIRA (Q9RZA4) Bacteriophytochrome (EC 2.7.13.3) (Phytochro...	34	0.28
43	TOP6B_METAC (Q8TQF7) Type II DNA topoisomerase VI subunit B (EC ...	34	0.28
44	SASA_SYNP7 (Q06904) Adaptive-response sensory-kinase sasA (EC 2....	33	0.36
45	KDPD_MYCTU (P96372) Sensor protein kdpD (EC 2.7.13.3)	33	0.47
46	ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)	33	0.47
47	FIXL_RHIME (P10955) Sensor protein fixL (EC 2.7.13.3)	33	0.47
48	KINC_BACSU (P39764) Sporulation kinase C (EC 2.7.13.3)	33	0.47
49	GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)	32	0.81
50	SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	32	1.1
51	CHVG_AGRT5 (Q07737) Sensor protein chvG (EC 2.7.13.3)	32	1.1
52	SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	32	1.4
53	SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	32	1.4
54	IRLS_BURPS (O31396) Sensor protein irlS (EC 2.7.13.3)	31	1.8
55	DIVJ_CAUCR (Q03228) Histidine protein kinase divJ (EC 2.7.13.3)	31	2.4
56	TOP6B_METMA (Q8PUB8) Type II DNA topoisomerase VI subunit B (EC ...	31	2.4
57	SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precurs...	31	2.4
58	ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)	31	2.4
59	ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm...	31	2.4
60	CHVG_RHIME (P72292) Sensor protein chvG (EC 2.7.13.3) (Histidine...	31	2.4
61	TOP6B_METJA (Q58434) Type II DNA topoisomerase VI subunit B (EC ...	30	3.1
62	LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN...	30	3.1
63	FIXL_AZOCA (P26489) Sensor protein fixL (EC 2.7.13.3)	30	3.1
64	ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)	30	3.1
65	ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase...	30	3.1
66	DCTB_RHIME (P13633) C4-dicarboxylate transport sensor protein dc...	30	3.1
67	EFG2_PELCD (Q3A6Q0) Elongation factor G 2 (EF-G 2)	30	4.0
68	US12_HCMVA (P09721) Hypothetical protein HVLF6	30	4.0
69	CITA_KLEPN (P52687) Sensor kinase citA (EC 2.7.13.3)	30	4.0
70	DCTS_BACHD (Q9K997) Probable C4-dicarboxylate sensor kinase (EC ...	30	4.0
71	CITS_BACSU (O34427) Sensor protein citS (EC 2.7.13.3)	30	5.3
72	YCBM_BACSU (P42245) Hypothetical sensor-like histidine kinase yc...	30	5.3
73	LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ...	30	5.3
74	Y3189_ACIAD (Q6F7U1) Hypothetical UPF0350 protein ACIAD3189	30	5.3
75	PAX8_RAT (P51974) Paired box protein Pax-8	29	6.9
76	TRPM3_HUMAN (Q9HCF6) Transient receptor potential cation channel...	29	6.9
77	FIXL_BRAJA (P23222) Sensor protein fixL (EC 2.7.13.3)	29	6.9
78	DCTB_RHILE (P10047) C4-dicarboxylate transport sensor protein dc...	29	6.9
79	XYNA_BACHD (P07528) Endo-1,4-beta-xylanase A precursor (EC 3.2.1...	29	6.9
80	TORS_ECOLI (P39453) Sensor protein torS (EC 2.7.13.3)	29	6.9
81	MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)	29	9.0
82	ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)	29	9.0
83	COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1...	29	9.0
84	ZRAS_KLEOX (Q9APE0) Sensor protein zraS (EC 2.7.13.3)	29	9.0
85	EFG_GEOKA (Q5L400) Elongation factor G (EF-G)	29	9.0
86	DCTS_BACSU (P96601) Probable C4-dicarboxylate sensor kinase (EC ...	29	9.0

>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
          Length = 399

 Score =  128 bits (321), Expect = 1e-29
 Identities = 62/120 (51%), Positives = 90/120 (75%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           ++FEL KNS+RA  E +  +D+D+PP++++V  G ED++IK+SD GGG+ R+ L R+FTY
Sbjct: 244 IMFELFKNSMRATVENH-GADEDLPPIKVMVVRGAEDLSIKISDRGGGVSRTILDRLFTY 302

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P  +G      +AGYG+GLP+SRLYA+YF GD+ ++SMEGYGTDA + L  +
Sbjct: 303 MYSTAPP-PPRDGTQP--PLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMIFLKAI 359

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>PDK2_RAT (Q64536) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2) (PDK P45)
          Length = 407

 Score =  125 bits (315), Expect = 5e-29
 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + +S   +PP++I+VA G ED++IK+SD GGG+    + R+F+Y
Sbjct: 248 MLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P  +  + G  +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L  L
Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363

Query: 161 G-DSEE 147
             DS E
Sbjct: 364 STDSVE 369

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>PDK2_MOUSE (Q9JK42) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2)
          Length = 407

 Score =  125 bits (315), Expect = 5e-29
 Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + +S   +PP++I+VA G ED++IK+SD GGG+    + R+F+Y
Sbjct: 248 MLFELFKNAMRATVESH-ESSLTLPPIKIMVALGEEDLSIKMSDRGGGVPLRRIERLFSY 306

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P  +  + G  +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L  L
Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363

Query: 161 G-DSEE 147
             DS E
Sbjct: 364 STDSVE 369

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>PDK2_HUMAN (Q15119) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2)
          Length = 407

 Score =  124 bits (312), Expect = 1e-28
 Identities = 64/126 (50%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + +S   +PP++++VA G ED++IK+SD GGG+    + R+F+Y
Sbjct: 248 MLFELFKNAMRATVESH-ESSLILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSY 306

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P  +  + G  +AG+G+GLP+SRLYA+YF GDLQ+ SMEG+GTDA ++L  L
Sbjct: 307 MYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKAL 363

Query: 161 G-DSEE 147
             DS E
Sbjct: 364 STDSVE 369

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>PDK_DROME (P91622) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
           (DmPDK)
          Length = 413

 Score =  124 bits (311), Expect = 2e-28
 Identities = 62/127 (48%), Positives = 89/127 (70%), Gaps = 5/127 (3%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERY-MDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345
           MLFEL KNS+RAV E +  D++  +PP+++ +  G ED+ +K+SD+GGGI RS   ++F 
Sbjct: 250 MLFELFKNSMRAVVEHHGHDNNDTLPPLKVAICKGKEDICVKISDQGGGIPRSQTDQLFK 309

Query: 344 YLYSTAKNLPDIEGPSEG----VTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYL 177
           Y+YSTA        PS+     V +AGYG+GLP+SRLYA+YF GD+ ++S EG+GTDA +
Sbjct: 310 YMYSTAPQ------PSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGTDAII 363

Query: 176 HLSRLGD 156
           +L  L D
Sbjct: 364 YLKALSD 370

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>PDK1_MOUSE (Q8BFP9) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1)
          Length = 434

 Score =  124 bits (310), Expect = 2e-28
 Identities = 63/121 (52%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDV-PPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345
           M+FEL KN++RA  E +  +DK V PP+++ V  G ED+T+K+SD GGG+  S + R+F 
Sbjct: 274 MVFELFKNAMRATMEHH--ADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLSKIDRLFN 331

Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165
           Y+YSTA   P +E  S  V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++  
Sbjct: 332 YMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKA 389

Query: 164 L 162
           L
Sbjct: 390 L 390

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>PDK3_HUMAN (Q15120) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 3)
          Length = 406

 Score =  123 bits (309), Expect = 3e-28
 Identities = 62/120 (51%), Positives = 84/120 (70%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KNS+RA  E Y D  +  P V+ +V  G ED++IK+SD GGG+    + R+F Y
Sbjct: 244 MLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNY 303

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P +E P+    +AG+G+GLP+SRLYA+YF GDL++ SMEG GTDA ++L  L
Sbjct: 304 MYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL 361

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>PDK3_MOUSE (Q922H2) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 3)
          Length = 415

 Score =  122 bits (305), Expect = 8e-28
 Identities = 61/120 (50%), Positives = 84/120 (70%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KNS+RA  E + D  +  P V+ +V  G ED++IK+SD GGG+    + R+F Y
Sbjct: 244 MLFELFKNSMRATVELHEDKKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNY 303

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P +E P+    +AG+G+GLP+SRLYA+YF GDL++ SMEG GTDA ++L  L
Sbjct: 304 MYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL 361

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>PDK1_RAT (Q63065) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1) (PDK p48)
          Length = 434

 Score =  122 bits (305), Expect = 8e-28
 Identities = 62/121 (51%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDV-PPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345
           M+FEL KN++RA  E +  +DK V PP+++ V  G ED+T+K+SD GGG+    + R+F 
Sbjct: 274 MVFELFKNAMRATMEHH--ADKGVYPPIQVHVTLGEEDLTVKMSDRGGGVPLRKIDRLFN 331

Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165
           Y+YSTA   P +E  S  V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++  
Sbjct: 332 YMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKA 389

Query: 164 L 162
           L
Sbjct: 390 L 390

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>PDK1_HUMAN (Q15118) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1)
          Length = 436

 Score =  119 bits (299), Expect = 4e-27
 Identities = 59/120 (49%), Positives = 85/120 (70%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           M+FEL KN++RA  E + +     PP+++ V  G ED+T+K+SD GGG+    + R+F Y
Sbjct: 276 MVFELFKNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNY 334

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA   P +E  S  V +AG+G+GLP+SRLYAQYF GDL++ S+EGYGTDA +++  L
Sbjct: 335 MYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKAL 392

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>PDK_CAEEL (Q02332) Probable [pyruvate dehydrogenase [lipoamide]] kinase,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase)
          Length = 401

 Score =  117 bits (292), Expect = 3e-26
 Identities = 59/117 (50%), Positives = 84/117 (71%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           M+FEL KN++RA  E Y   D D+P +++ V  G ED++IK+ D GGG+ R+ L R++ Y
Sbjct: 244 MMFELFKNAMRATVE-YHGVDDDLPDIKVYVVKGQEDLSIKICDRGGGVSRTILERLYNY 302

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171
           +YSTA   P  +G      +AGYG+GLP+SRLYA+YF GDL ++SMEG+GTDA ++L
Sbjct: 303 MYSTAPP-PPRDGTQ--APLAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACIYL 356

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>PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score =  116 bits (291), Expect = 3e-26
 Identities = 60/120 (50%), Positives = 81/120 (67%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  ER  +S   + PV +IV  G ED+TIK+SD GGG+      R+F+Y
Sbjct: 251 MLFELFKNAMRATVER-QESWPSLTPVEVIVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           +YSTA     +   S    +AG+G+GLP+SRLYA+YF GDL + S+ GYGTDA ++L  L
Sbjct: 310 MYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL 367

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>PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 411

 Score =  115 bits (288), Expect = 7e-26
 Identities = 57/120 (47%), Positives = 81/120 (67%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + ++   + P+ +IV  G ED+TIK+SD GGG+    + R+F+Y
Sbjct: 251 MLFELFKNAMRATVE-HQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSY 309

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            YSTA     +   S    +AG+G+GLP+SRLYA+YF GDL + S+ GYGTDA ++L  L
Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKAL 367

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>PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score =  111 bits (278), Expect = 1e-24
 Identities = 58/120 (48%), Positives = 78/120 (65%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + ++   + PV   V  G ED+TIK+SD GGG+      R+F+Y
Sbjct: 251 MLFELFKNAMRATVE-HQENRPSLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            YSTA     +   S    +AG+G+GLP+SRLYA+YF GDL + SM GYGTDA ++L  L
Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKAL 367

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>PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score =  110 bits (275), Expect = 2e-24
 Identities = 58/120 (48%), Positives = 78/120 (65%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           MLFEL KN++RA  E + ++   + PV   V  G ED+TIK+SD GGG+      R+F+Y
Sbjct: 251 MLFELFKNAMRATVE-HQENRPFLTPVEATVVLGKEDLTIKISDRGGGVPLRITDRLFSY 309

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            YSTA     +   S    +AG+G+GLP+SRLYA+YF GDL + SM GYGTDA ++L  L
Sbjct: 310 TYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAIIYLKAL 367

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>BCKD_HUMAN (O14874) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score =  103 bits (257), Expect = 3e-22
 Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L EL+KN++RA  E ++D+  +VP V I +A+   D+ I++SD GGGI    L R+  Y
Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDY 331

Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198
            ++TA+               D+   ++   M G+GFGLP SR YA+Y GG LQ+ S++G
Sbjct: 332 HFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391

Query: 197 YGTDAYLHLSRLGDSEE 147
            GTD YL L  +   EE
Sbjct: 392 IGTDVYLRLRHIDGREE 408

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>BCKD_RAT (Q00972) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score =  103 bits (256), Expect = 4e-22
 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L EL+KN++RA  E ++D+  +VP V I +A+   D+ I++SD GGGI    L R+  Y
Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDY 331

Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198
            ++TA+               D+    +   M G+GFGLP SR YA+Y GG LQ+ S++G
Sbjct: 332 HFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391

Query: 197 YGTDAYLHLSRLGDSEE 147
            GTD YL L  +   EE
Sbjct: 392 IGTDVYLRLRHIDGREE 408

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>BCKD_MOUSE (O55028) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score =  102 bits (255), Expect = 5e-22
 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L EL+KN++RA  E ++D+  +VP V I +A+   D+ I++SD GGGI    L R+  Y
Sbjct: 272 ILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMDY 331

Query: 341 LYSTAKNLP------------DIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198
            ++TA+               D+    +   M G+GFGLP SR YA+Y GG LQ+ S++G
Sbjct: 332 HFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQG 391

Query: 197 YGTDAYLHLSRLGDSEE 147
            GTD YL L  +   EE
Sbjct: 392 IGTDVYLRLRHIDGREE 408

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>YIE2_YEAST (P40530) Hypothetical 45.4 kDa protein in CBR5-NOT3 intergenic|
           region
          Length = 394

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRI-IVADGTEDVTIKVSDEGGGIRRSGLPRIFT 345
           ++ E+ KN+  A     +   K+  P+ I ++    +++ +++ D GGGI       +F 
Sbjct: 264 IMTEVFKNAFEA----QIALGKEHMPIEINLLKPDDDELYLRIRDHGGGITPEVEALMFN 319

Query: 344 YLYST-AKNLPDIEG---PSEGVT-MAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAY 180
           Y YST  +   D E    P E +  ++G GFGLP+ + Y + FGG + + S+ G+GTD Y
Sbjct: 320 YSYSTHTQQSADSESTDLPGEQINNVSGMGFGLPMCKTYLELFGGKIDVQSLLGWGTDVY 379

Query: 179 LHL 171
           + L
Sbjct: 380 IKL 382

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>YGF9_YEAST (P53170) Probable protein kinase YGL059W (EC 2.7.11.-)|
          Length = 491

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -2

Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
           G GL + ++YA+Y+ GDL + SM GYGTD  L L  L
Sbjct: 443 GIGLAMCKVYAEYWNGDLSLHSMPGYGTDVVLKLGNL 479



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVP-PVRIIVADGTEDVTIKVSDEGGGI 375
           +L E+++N+  A  + Y+    + P P+ + V    E    ++SD+ GG+
Sbjct: 297 LLGEILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGV 346

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>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 34/125 (27%), Positives = 58/125 (46%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L+ L+ N+++  Q+  +        VR+   +G + +  +V D G GI +  L +IF  
Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            Y        ++    G    G G GL VSR  A+  GGD+ + S +G G+   L +   
Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506

Query: 161 GDSEE 147
             +EE
Sbjct: 507 SVAEE 511

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>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 34/125 (27%), Positives = 58/125 (46%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L+ L+ N+++  Q+  +        VR+   +G + +  +V D G GI +  L +IF  
Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            Y        ++    G    G G GL VSR  A+  GGD+ + S +G G+   L +   
Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506

Query: 161 GDSEE 147
             +EE
Sbjct: 507 SVAEE 511

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>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 34/125 (27%), Positives = 58/125 (46%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L+ L+ N+++  Q+  +        VR+   +G + +  +V D G GI +  L +IF  
Sbjct: 402 ILWNLISNAVKFTQQGQVT-------VRVRYDEG-DMLHFEVEDSGIGIPQDELDKIFAM 453

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            Y        ++    G    G G GL VSR  A+  GGD+ + S +G G+   L +   
Sbjct: 454 YYQ-------VKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAP 506

Query: 161 GDSEE 147
             +EE
Sbjct: 507 SVAEE 511

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>AFSQ2_STRCO (Q04943) Signal transduction histidine-protein kinase afsQ2 (EC|
           2.7.13.3)
          Length = 535

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = -2

Query: 446 PVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMA 279
           PVR+ VA    ++ I+V D G GI    LP +F   Y  + + P  EG   G+++A
Sbjct: 424 PVRVSVARADHEIVIRVRDNGPGIPEDVLPHVFDRFYKASASRPRSEGSGLGLSIA 479

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>VIRAW_AGRTU (P07168) Wide host range virA protein (EC 2.7.13.3) (WHR virA)|
          Length = 829

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
 Frame = -2

Query: 446 PVRIIVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYST-AKNLPDIEGPSEGVTM 282
           PV+ I+A G     + V + +SD GGGI  + LP IF   +ST A+N             
Sbjct: 607 PVKKILAHGVMPPGDYVLLSISDNGGGIPEAVLPHIFEPFFSTRARN------------- 653

Query: 281 AGYGFGLPVSRLYAQYFGGDLQIISMEGYGT--DAYL 177
            G G GL     +   F G + + S  G+GT  D YL
Sbjct: 654 GGTGLGLASVHGHISAFAGYIDVSSTVGHGTRFDIYL 690

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>SASA_PROMA (Q7BWI3) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)|
          Length = 381

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTED-VTIKVSDEGGGIRRSGLPRIFT 345
           +L  L++N+L+        +D D   V I +   T   V I VSD+G GI      RIF 
Sbjct: 263 VLLNLIENALK------FSNDGDT--VEITMLHRTNQWVQISVSDKGPGIPEEEQQRIF- 313

Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAY 180
                   L  +  P      +G+G GL V R   +  GG + ++S  G G+  Y
Sbjct: 314 --------LDRVRLPQTSNETSGFGIGLSVCRRIVEVHGGKIWVVSQPGEGSCFY 360

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>VIRA_AGRT9 (P10799) Wide host range virA protein (EC 2.7.13.3) (WHR virA)|
          Length = 829

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
 Frame = -2

Query: 446 PVRIIVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYST-AKNLPDIEGPSEGVTM 282
           PV+ I+A G     + V + +SD GGGI  + LP IF   ++T A+N             
Sbjct: 607 PVKKILAHGVMPPGDYVLLSISDNGGGIPEAVLPHIFEPFFTTRARN------------- 653

Query: 281 AGYGFGLPVSRLYAQYFGGDLQIISMEGYGT--DAYL 177
            G G GL     +   F G + + S  G+GT  D YL
Sbjct: 654 GGTGLGLASVHGHISAFAGYIDVSSTVGHGTRFDIYL 690

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>PHOR_BACSU (P23545) Alkaline phosphatase synthesis sensor protein phoR (EC|
           2.7.13.3)
          Length = 579

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 28/96 (29%), Positives = 43/96 (44%)
 Frame = -2

Query: 443 VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264
           V I V    +D+ I+V+D G GI++  +PRIF   Y   K+     G        G G G
Sbjct: 489 VAINVKPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSG--------GTGLG 540

Query: 263 LPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRLGD 156
           L + +   +   G + + S  G GT   + L R  +
Sbjct: 541 LAIVKHLIEAHEGKIDVTSELGRGTVFTVTLKRAAE 576

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>YYCG_BACSU (Q45614) Sensor protein yycG (EC 2.7.13.3)|
          Length = 611

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 26/83 (31%), Positives = 39/83 (46%)
 Frame = -2

Query: 437 IIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLP 258
           I V +  E + I V DEG GI +  + ++F   Y   K        +    + G G GL 
Sbjct: 518 IDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVDK--------ARTRKLGGTGLGLA 569

Query: 257 VSRLYAQYFGGDLQIISMEGYGT 189
           +++   Q  GGD+   S+EG GT
Sbjct: 570 IAKEMVQAHGGDIWADSIEGKGT 592

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>ZRAS_ECO57 (Q8X614) Sensor protein zraS (EC 2.7.13.3)|
          Length = 458

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 28/110 (25%), Positives = 46/110 (41%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L  N+++A+ +  +        + +  ++    V I V+D G GI    L  IFT 
Sbjct: 353 VLLNLYLNAIQAIGQHGV--------ISVTASESGAGVKISVTDSGKGIAADQLEAIFTP 404

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192
            ++T                 G G GL V     +  GG +Q+ S+EG G
Sbjct: 405 YFTTKAE--------------GTGLGLAVVHNIVEQHGGTIQVASLEGKG 440

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>ZRAS_ECOLI (P14377) Sensor protein zraS (EC 2.7.13.3)|
          Length = 465

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 30/117 (25%), Positives = 48/117 (41%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L  N+++A+ +  +        + +  ++    V I V+D G GI    L  IFT 
Sbjct: 360 VLLNLYLNAIQAIGQHGV--------ISVTASESGAGVKISVTDSGKGIAADQLDAIFTP 411

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171
            ++T                 G G GL V     +  GG +Q+ S EG G+   L L
Sbjct: 412 YFTTKAE--------------GTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWL 454

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>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)|
          Length = 735

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = -2

Query: 464 SDKDVPPVRIIVADGTED-VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGV 288
           SD   PP   +V  G+   + +KV D G GI    +P++FT    T        G     
Sbjct: 489 SDNRAPPDFFVVPTGSHFYLRVKVKDLGAGINPQDIPKLFTKFAQTQSLATRSSG----- 543

Query: 287 TMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192
              G G GL +S+ +     G++ I S EG G
Sbjct: 544 ---GSGLGLAISKRFVNLMEGNIWIES-EGVG 571

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>CREC_ECOLI (P08401) Sensor protein creC (EC 2.7.13.3)|
          Length = 474

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 29/84 (34%), Positives = 37/84 (44%)
 Frame = -2

Query: 416 EDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQ 237
           E VT+KV D G GI    L RIF   YS    LP   G          G GL      A+
Sbjct: 398 EHVTLKVLDTGSGIPDYALSRIFERFYS----LPRANGQKSS------GLGLAFVSEVAR 447

Query: 236 YFGGDLQIISMEGYGTDAYLHLSR 165
            F G++ + +++  G  A L L R
Sbjct: 448 LFNGEVTLRNVQEGGVLASLRLHR 471

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>ZRAS_SALTY (P37461) Sensor protein zraS (EC 2.7.13.3)|
          Length = 465

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = -2

Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243
           GT+ V I V+D G GI    L  IFT  ++T  +              G G GL V +  
Sbjct: 388 GTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKAD--------------GTGLGLAVVQNI 433

Query: 242 AQYFGGDLQIISMEGYG 192
            +  GG +++ S+EG G
Sbjct: 434 IEQHGGAIKVKSIEGKG 450

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>ZRAS_SALTI (Q8Z332) Sensor protein zraS (EC 2.7.13.3)|
          Length = 465

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = -2

Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243
           GT+ V I V+D G GI    L  IFT  ++T  +              G G GL V +  
Sbjct: 388 GTDRVIITVTDSGKGIAPDQLEAIFTPYFTTKAD--------------GTGLGLAVVQNI 433

Query: 242 AQYFGGDLQIISMEGYG 192
            +  GG +++ S+EG G
Sbjct: 434 IEQHGGAIKVKSIEGKG 450

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>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 25/80 (31%), Positives = 34/80 (42%)
 Frame = -2

Query: 410  VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231
            V   VSD G GI  +   ++F       K    + G +E     G G GL +SR   +  
Sbjct: 872  VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924

Query: 230  GGDLQIISMEGYGTDAYLHL 171
            GG L + S  G GT   + L
Sbjct: 925  GGTLVMRSAPGVGTTVSVDL 944

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>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 25/80 (31%), Positives = 34/80 (42%)
 Frame = -2

Query: 410  VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231
            V   VSD G GI  +   ++F       K    + G +E     G G GL +SR   +  
Sbjct: 872  VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924

Query: 230  GGDLQIISMEGYGTDAYLHL 171
            GG L + S  G GT   + L
Sbjct: 925  GGTLVMRSAPGVGTTVSVDL 944

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>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)|
          Length = 1238

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 25/80 (31%), Positives = 34/80 (42%)
 Frame = -2

Query: 410  VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231
            V   VSD G GI  +   ++F       K    + G +E     G G GL +SR   +  
Sbjct: 872  VQFSVSDTGCGISEADQRQLF-------KPFSQVGGSAEAGPAPGTGLGLSISRRLVELM 924

Query: 230  GGDLQIISMEGYGTDAYLHL 171
            GG L + S  G GT   + L
Sbjct: 925  GGTLVMRSAPGVGTTVSVDL 944

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>DPIB_ECOLI (P77510) Sensor kinase dpiB (EC 2.7.13.3) (Sensor kinase citA)|
          Length = 552

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 29/107 (27%), Positives = 47/107 (43%)
 Frame = -2

Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330
           +V N L    E  + SD+    V + ++D  +DV I+V+D+G G+  S   +IF    ST
Sbjct: 436 IVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVST 495

Query: 329 AKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189
             + P             +G GL +   Y    GG + +   +  GT
Sbjct: 496 RADEP-----------GEHGIGLYLIASYVTRCGGVITLEDNDPCGT 531

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>TOP6B_HALSA (Q9HR31) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 804

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
 Frame = -2

Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIF-TYLY 336
           E V N+L A +E  +     +P + + +++G +  T+ V D G GI  + +P+IF   LY
Sbjct: 54  EAVDNALDATEEAGI-----LPDIYVEISEGRDYYTLIVEDNGPGITNAQIPKIFGKLLY 108

Query: 335 STAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
            +  +  +     +G+       G+  + LY+Q   G
Sbjct: 109 GSRFHAREQSRGQQGI-------GISAAVLYSQLTSG 138

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>VIRAL_AGRTU (P07167) Limited host range virA protein (EC 2.7.13.3) (LHR virA)|
          Length = 835

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
 Frame = -2

Query: 434 IVADGT----EDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGF 267
           ++A+GT    + + +   D GGGI ++ LP IF   + T                 G G 
Sbjct: 615 VLANGTIPAGDYILLSFEDNGGGIGQAALPHIFEPFFRTR------------AQCGGTGL 662

Query: 266 GLPVSRLYAQYFGGDLQIISMEGYGT--DAYLHLS 168
           GL     +     G + +IS  G GT  D YL  S
Sbjct: 663 GLSTVHGHVSAMAGFVDVISTVGRGTRFDIYLPTS 697

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>BPHY_DEIRA (Q9RZA4) Bacteriophytochrome (EC 2.7.13.3) (Phytochrome-like|
           protein)
          Length = 755

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 25/73 (34%), Positives = 34/73 (46%)
 Frame = -2

Query: 407 TIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFG 228
           +I VSD+G GI      RIF  L+    +L +           G G GLP+ R  A+  G
Sbjct: 675 SIAVSDQGAGIAPEYQERIFL-LFQRLGSLDEA---------LGNGLGLPLCRKIAELHG 724

Query: 227 GDLQIISMEGYGT 189
           G L + S  G G+
Sbjct: 725 GTLTVESAPGEGS 737

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>TOP6B_METAC (Q8TQF7) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 621

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
 Frame = -2

Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYS 333
           E V NSL A +E  +  D  V   R     G + VT+ + D G GI R  +P++F     
Sbjct: 44  EAVDNSLDACEEAGILPDILVQVERT----GQDYVTVIIEDNGPGIVREQIPKVF----- 94

Query: 332 TAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG-DLQIISMEGYGTDAYLH 174
            AK L      +   +    G G+  + LYAQ   G   +I+S  G    A+ +
Sbjct: 95  -AKLLYGSRFHALKQSRGQQGIGISAAVLYAQMTAGRHTKILSKTGSNVPAHYY 147

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>SASA_SYNP7 (Q06904) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)|
           (Synechococcus adaptive sensor protein A)
          Length = 387

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 26/77 (33%), Positives = 35/77 (45%)
 Frame = -2

Query: 419 TEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYA 240
           ++ V I +SD G GI R  L  IF       KNL  +   S   +  GYG GL V +   
Sbjct: 306 SQKVQISISDTGSGIPRDQLSVIF-------KNLVRL---SRDSSQEGYGIGLSVCQRIV 355

Query: 239 QYFGGDLQIISMEGYGT 189
           Q   G + + S  G G+
Sbjct: 356 QAHFGRIWVASELGQGS 372

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>KDPD_MYCTU (P96372) Sensor protein kdpD (EC 2.7.13.3)|
          Length = 860

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 23/92 (25%), Positives = 36/92 (39%)
 Frame = -2

Query: 443  VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264
            VR+      E V I V DEG G+ R    ++F             + P +     G G G
Sbjct: 773  VRVNAGRVRERVLINVIDEGPGVPRGTEEQLFA----------PFQRPGDHDNTTGVGLG 822

Query: 263  LPVSRLYAQYFGGDLQIISMEGYGTDAYLHLS 168
            + V+R + +  GG +      G G    + L+
Sbjct: 823  MSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854

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>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)|
          Length = 738

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = -2

Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
           +KV D G GI    +P+IFT    T        G        G G GL +S+ +     G
Sbjct: 509 VKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSG--------GSGLGLAISKRFVNLMEG 560

Query: 224 DLQIISMEGYG 192
           ++ I S +G G
Sbjct: 561 NIWIES-DGLG 570

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>FIXL_RHIME (P10955) Sensor protein fixL (EC 2.7.13.3)|
          Length = 505

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 27/110 (24%), Positives = 48/110 (43%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L++N++ A++      D+    +R + AD  E V + V D GGGI      ++F  
Sbjct: 396 VLINLMRNAIEAMRH----VDRRELTIRTMPADPGE-VAVVVEDTGGGIPEEVAGQLFKP 450

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192
             +T  +              G G GL +S+   +  GG++ +   E  G
Sbjct: 451 FVTTKAS--------------GMGIGLSISKRIVEAHGGEMTVSKNEAGG 486

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>KINC_BACSU (P39764) Sporulation kinase C (EC 2.7.13.3)|
          Length = 428

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 31/123 (25%), Positives = 48/123 (39%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +   ++KN + A+ +  +        V I  A       I V DEG G+ +  L +I   
Sbjct: 328 VFINIIKNGIEAMPKGGV--------VTISTAKTASHAVISVKDEGNGMPQEKLKQIGKP 379

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSRL 162
            YST +               G G GLP+     +   G+L+I S  G G+   + L   
Sbjct: 380 FYSTKEK--------------GTGLGLPICLRILKEHDGELKIESEAGKGSVFQVVLPLK 425

Query: 161 GDS 153
            DS
Sbjct: 426 SDS 428

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>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)|
          Length = 907

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTED---VTIKVSDEGGGIRRSGLPRI 351
           +L  LV N+++  +E  + +       R ++ D TE+   + I V D G G+    +  +
Sbjct: 394 ILTNLVSNAIKFTREGTIVA-------RAMLEDETEEHAQLRISVQDTGIGLSSQDVRAL 446

Query: 350 FTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171
           F        +L    G        G G GL +S+   +  GG++ + S  G G++ ++ L
Sbjct: 447 FQAFSQADNSLSRQPG--------GTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISL 498

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>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -2

Query: 269 FGLPVSRLYAQYFGGD 222
           FG+PV RLY  YFGGD
Sbjct: 126 FGIPVERLYVTYFGGD 141

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>CHVG_AGRT5 (Q07737) Sensor protein chvG (EC 2.7.13.3)|
          Length = 596

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = -2

Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
           ++V D G GI+   + RIF   Y+   + P  EG  +       G GL +SR  A+  GG
Sbjct: 514 VQVEDNGPGIQAEDIDRIFERFYT---DRPASEGFGQ-----NSGLGLSISRQIAEAHGG 565

Query: 224 DLQ 216
            L+
Sbjct: 566 SLR 568

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>SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 269 FGLPVSRLYAQYFGGD 222
           FG+P+ RLY  YFGGD
Sbjct: 126 FGIPIERLYVTYFGGD 141

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>SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS) (NY-REN-42 antigen)
          Length = 968

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 269 FGLPVSRLYAQYFGGD 222
           FG+P+ RLY  YFGGD
Sbjct: 126 FGIPIERLYVTYFGGD 141

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>IRLS_BURPS (O31396) Sensor protein irlS (EC 2.7.13.3)|
          Length = 464

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 22/73 (30%), Positives = 29/73 (39%)
 Frame = -2

Query: 443 VRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFG 264
           + I  A   +  TI VSD G GI      RIF   Y           P+   + +G G G
Sbjct: 377 ITIECAQAADAATISVSDTGRGIEAPHRERIFERFYRV--------DPARHNSASGTGLG 428

Query: 263 LPVSRLYAQYFGG 225
           L + R   +  GG
Sbjct: 429 LAIVRSIMENHGG 441

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>DIVJ_CAUCR (Q03228) Histidine protein kinase divJ (EC 2.7.13.3)|
          Length = 597

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = -2

Query: 434 IVADGTEDVT-IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLP 258
           + A G + V  I V+D G GI    L R+           P  +         G G GL 
Sbjct: 470 VTAHGYDGVLEIVVADTGVGISPEDLERL---------GRPYEQAGGAEQRARGTGLGLS 520

Query: 257 VSRLYAQYFGGDLQIISMEGYGTDAYLHL 171
           + R +AQ  GG++ I S  G GT   + L
Sbjct: 521 LVRAFAQLHGGEMVIESRLGAGTTVSVRL 549

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>TOP6B_METMA (Q8PUB8) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 621

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 29/96 (30%), Positives = 42/96 (43%)
 Frame = -2

Query: 512 ELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYS 333
           E V N+L A +E  +  D  V   R     G + VT+ + D G GI R  +P++F     
Sbjct: 44  EAVDNALDACEEAGILPDILVQVERT----GPDYVTVIIEDNGPGIVREQIPKVF----- 94

Query: 332 TAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
            AK L      +   +    G G+  + LYAQ   G
Sbjct: 95  -AKLLYGSRFHALKQSRGQQGIGISAAVLYAQMTAG 129

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>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.7) (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 269 FGLPVSRLYAQYFGGD 222
           +GLP  R+YA YFGGD
Sbjct: 180 YGLPTDRIYATYFGGD 195

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>ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)|
          Length = 740

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/87 (26%), Positives = 36/87 (41%)
 Frame = -2

Query: 452 VPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGY 273
           VP    + +D    + ++V D G GI    +P++FT    T        GP       G 
Sbjct: 497 VPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTT------VGPRNS---CGS 547

Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYG 192
           G GL + + +     G + + S EG G
Sbjct: 548 GLGLAICKRFVNLMEGHIWLES-EGLG 573

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>ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm-ETR1)|
          Length = 740

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/87 (26%), Positives = 36/87 (41%)
 Frame = -2

Query: 452 VPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGY 273
           VP    + +D    + ++V D G GI    +P++FT    T        GP       G 
Sbjct: 497 VPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTT------VGPRNS---GGS 547

Query: 272 GFGLPVSRLYAQYFGGDLQIISMEGYG 192
           G GL + + +     G + + S EG G
Sbjct: 548 GLGLAICKRFVNLMEGHIWLES-EGLG 573

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>CHVG_RHIME (P72292) Sensor protein chvG (EC 2.7.13.3) (Histidine kinase|
           sensory protein exoS)
          Length = 577

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = -2

Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
           + V D G GI+   + RIF   Y+      D    S        G GL +SR  A+  GG
Sbjct: 497 VYVEDNGPGIQAEDIDRIFERFYTDRPEGEDFGQNS--------GLGLSISRQIAEAHGG 548

Query: 224 DLQIISMEG 198
            L+  ++ G
Sbjct: 549 TLRAENIAG 557

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>TOP6B_METJA (Q58434) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 660

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVAD-GTEDVTIKVSDEGGGIRRSGLPRIFT 345
           ++ ELV NSL A +E  +     +P +++ +   G +   + V D G GI    +P++F 
Sbjct: 41  IIHELVTNSLDACEEAGI-----LPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVFG 95

Query: 344 YLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQY-FGGDLQIISMEGYG 192
            + + +K    I+   +       G G     L++Q   G  L+II+  G G
Sbjct: 96  KMLAGSKMHRFIQSRGQ------QGIGAAGVLLFSQITTGKPLKIITSTGDG 141

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>LUXN_VIBHA (P54301) Autoinducer 1 sensor kinase/phosphatase luxN (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 849

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 29/116 (25%), Positives = 49/116 (42%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           ++F L++N++      Y DS  D   + I    G  + T+   D G GI  +   +IF  
Sbjct: 582 VIFNLIRNAIY-----YFDSYPD-SQIEISTKTGPYENTLIFRDTGPGIDETISHKIFDD 635

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLH 174
            +S  K+              G G GL   +   + FGG ++  S  G  T+ +L+
Sbjct: 636 FFSYQKS-------------GGSGLGLGYCQRVMRSFGGRIECKSKLGTFTEFHLY 678

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>FIXL_AZOCA (P26489) Sensor protein fixL (EC 2.7.13.3)|
          Length = 504

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 30/111 (27%), Positives = 47/111 (42%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L++N+L A+    MD+ +    V+   A+  + VT+ V D G GI      ++FT 
Sbjct: 396 VLLNLMRNALEAM----MDASRRQLLVQTTPAED-DMVTVSVCDTGHGISDEMRAQLFTP 450

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189
             +T                 G G GL +SR   +  GG +      G GT
Sbjct: 451 FVTTKAQ--------------GMGVGLSISRTIIEAHGGRIWAEPNAGGGT 487

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>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)|
          Length = 740

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/85 (23%), Positives = 33/85 (38%)
 Frame = -2

Query: 461 DKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTM 282
           D   P    + +D    + ++V D G GI    +P++FT    +         P      
Sbjct: 494 DPRAPDFFPVSSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQ--------PVATKNS 545

Query: 281 AGYGFGLPVSRLYAQYFGGDLQIIS 207
            G G GL +S+ +     G + I S
Sbjct: 546 GGSGLGLAISKRFVNLMDGHIWIDS 570

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>ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase atoS (EC|
           2.7.13.3)
          Length = 608

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = -2

Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
           I + D G GI  S   +IF   ++T  +              G G GL +S+       G
Sbjct: 535 ISIEDNGCGIDLSLQKKIFDPFFTTKAS--------------GTGLGLALSQRIINAHQG 580

Query: 224 DLQIISMEGYG 192
           D+++ S+ GYG
Sbjct: 581 DIRVASLPGYG 591

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>DCTB_RHIME (P13633) C4-dicarboxylate transport sensor protein dctB (EC|
           2.7.13.3)
          Length = 621

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 28/105 (26%), Positives = 47/105 (44%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L++N+L A+     DS+     VR   A G   + + V+D G GI       +FT 
Sbjct: 523 VLINLLQNALEAIG----DSEDGAIQVRCEEAAG--GIALTVADNGPGIAADVREELFTP 576

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIIS 207
            ++T+K               G G GL +S+     +GG +++ S
Sbjct: 577 -FNTSKE-------------DGLGLGLAISKEIVSDYGGTIEVES 607

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>EFG2_PELCD (Q3A6Q0) Elongation factor G 2 (EF-G 2)|
          Length = 692

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -2

Query: 506 VKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEG 384
           V+N L AV + YM S  DVP +  +V D  E++T    D+G
Sbjct: 268 VQNLLDAVID-YMPSPVDVPAITGVVPDTEEEITRPAGDDG 307

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>US12_HCMVA (P09721) Hypothetical protein HVLF6|
          Length = 281

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -3

Query: 298 VKE*LWLDMVLDFQLVAFMRNISVAT---YKSYPWRDTAPMLTSTCHGWET 155
           V+  LW  MV  +  V F  + ++AT   +   PWR TAP L  T   W T
Sbjct: 46  VQHFLW--MVRLYGTVVFQTSATIATTILFMLIPWRVTAPYLRDTLPFWST 94

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>CITA_KLEPN (P52687) Sensor kinase citA (EC 2.7.13.3)|
          Length = 547

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
 Frame = -2

Query: 437 IIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAG---YGF 267
           +I +DG E V I+++D+G GI  +   RIF                  GVT +    +G 
Sbjct: 464 LINSDGQE-VIIEIADQGCGIDEALRDRIF----------------ERGVTSSASKDHGI 506

Query: 266 GLPVSRLYAQYFGGDLQIISMEGYGT--DAYLHLSR 165
           GL + R Y +  GG + + +   +GT    Y+ L+R
Sbjct: 507 GLWLVRSYVEQAGGSIVVENNIPFGTIFTLYIPLTR 542

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>DCTS_BACHD (Q9K997) Probable C4-dicarboxylate sensor kinase (EC 2.7.13.3)|
          Length = 532

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 27/115 (23%), Positives = 49/115 (42%)
 Frame = -2

Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330
           L+ NSL A      D +K V    + + +  + + I+V D G GIR     ++F   +ST
Sbjct: 432 LIDNSLDAFSST-QDQNKTV---HVFIGEENDFLKIRVRDNGEGIREEVREKMFVRGFST 487

Query: 329 AKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHLSR 165
                         + +G G GL + +   +   G +++ S    GT   ++L +
Sbjct: 488 K-------------STSGRGIGLFLIQAIVERVEGKIEVESELNIGTTFSIYLPK 529

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>CITS_BACSU (O34427) Sensor protein citS (EC 2.7.13.3)|
          Length = 542

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = -2

Query: 509 LVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTYLYST 330
           L+ N+  AV E+       V  V   + D   D+ I+VSD G G+    +  +F   YS+
Sbjct: 432 LIDNAFEAVAEQ------SVKEVLFFITDMGHDIVIEVSDTGPGVPPEKIEAVFERGYSS 485

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>YCBM_BACSU (P42245) Hypothetical sensor-like histidine kinase ycbM (EC|
           2.7.13.3)
          Length = 158

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/83 (25%), Positives = 34/83 (40%)
 Frame = -2

Query: 410 VTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYF 231
           + I V D G GI  +   R+F  LY+  +        S      G G GL +++   +  
Sbjct: 82  IAITVWDRGKGISETDQQRVFERLYTLEE--------SRNKAFQGSGLGLTITKRLTEKM 133

Query: 230 GGDLQIISMEGYGTDAYLHLSRL 162
           GG + + S     T   + L R+
Sbjct: 134 GGIISVQSKPYERTAFTITLKRM 156

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>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 858

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 10/121 (8%)
 Frame = -2

Query: 521 MLFELVKNS----------LRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIR 372
           +LF LV N+          L A  E++  +D  V             + +++SD G GI 
Sbjct: 601 ILFNLVSNAVKFTPSGCVRLHAELEQFYGADNSV-------------LVVEISDTGIGIE 647

Query: 371 RSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYG 192
              L  +F             E  +      G G GL + +       GD+Q+ S +G G
Sbjct: 648 SDKLDEMFEPFVQ--------EEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQG 699

Query: 191 T 189
           T
Sbjct: 700 T 700

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>Y3189_ACIAD (Q6F7U1) Hypothetical UPF0350 protein ACIAD3189|
          Length = 85

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +3

Query: 48  LKQYLQTSTGITISKSSLITEIVSEQEGPLRQWLL*VSQP*QVEV 182
           +K Y  T+     S+ +L  E+V++++  L  W + VS+P QVE+
Sbjct: 31  VKNYYLTAPA---SEKALFAELVAQEDPDLLDWFMEVSEPPQVEL 72

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>PAX8_RAT (P51974) Paired box protein Pax-8|
          Length = 458

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 56  IFANQHGDYN-KQEQPNYRNCIRTGGAIKAMAPLSLPAVTSGGKHRCRIPPW 208
           + A+ H  Y  KQE P   +   T  ++ + A L L  V SGG     +PP+
Sbjct: 299 VVADPHSPYAIKQETPELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVPPF 350

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>TRPM3_HUMAN (Q9HCF6) Transient receptor potential cation channel subfamily M|
           member 3 (Long transient receptor potential channel 3)
           (LTrpC3) (Melastatin-2) (MLSN2)
          Length = 1732

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
 Frame = -2

Query: 458 KDVPPVRIIVADGT---EDVTI---KVSDEGGGIRRS-------GLPRIFTYLYSTAKNL 318
           +D PPV ++V DG+    D+     K S+EGG I  S        + + FTY  + A++L
Sbjct: 377 RDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYTRTQAQHL 436

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>FIXL_BRAJA (P23222) Sensor protein fixL (EC 2.7.13.3)|
          Length = 505

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 23/99 (23%), Positives = 42/99 (42%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L +N+L A+ +      +++       AD  + + ++VSD G G +   +P +F  
Sbjct: 402 VLVNLFRNALEAMAQ---SQRRELVVTNTPAAD--DMIEVEVSDTGSGFQDDVIPNLFQT 456

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
            ++T                 G G GL +SR   +  GG
Sbjct: 457 FFTTKD--------------TGMGVGLSISRSIIEAHGG 481

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>DCTB_RHILE (P10047) C4-dicarboxylate transport sensor protein dctB (EC|
           2.7.13.3)
          Length = 622

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 28/108 (25%), Positives = 47/108 (43%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRSGLPRIFTY 342
           +L  L++N+L AV  +  +       V I  +     VT+ V+D G GI       +FT 
Sbjct: 523 VLINLLQNALEAVAPKAGEGR-----VEIRTSTDAGMVTVTVADNGPGIPTEIRKGLFTP 577

Query: 341 LYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEG 198
            ++T+K              +G G GL +S+     +GG + + S  G
Sbjct: 578 -FNTSKE-------------SGLGLGLVISKDIVGDYGGRMDVASDSG 611

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>XYNA_BACHD (P07528) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 396

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDVTIKVSDEGGGIRRS 366
           +L E ++N ++ V ERY D   DV          + DV  +V D+GGG+R S
Sbjct: 167 LLLERMENHIKTVVERYKD---DVT---------SWDVVNEVIDDGGGLRES 206

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>TORS_ECOLI (P39453) Sensor protein torS (EC 2.7.13.3)|
          Length = 914

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 2/119 (1%)
 Frame = -2

Query: 521 MLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGT--EDVTIKVSDEGGGIRRSGLPRIF 348
           ++  L+ N+LR   E Y           II+   T  E   ++V D G GI  + L  IF
Sbjct: 565 VITNLLSNALRFTDEGY-----------IILRSRTDGEQWLVEVEDSGCGIDPAKLAEIF 613

Query: 347 TYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGTDAYLHL 171
                 +                G G GL +S   AQ  GG+L   S    G+   L L
Sbjct: 614 QPFVQVSGK------------RGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRL 660

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>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1971

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 45  PLKQYLQTSTGITISKSSLITEIVSEQEGPLRQW 146
           PL   L+ S  ++ +   L+T+I+ ++EG LR W
Sbjct: 679 PLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDW 712

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>ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)|
          Length = 741

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -2

Query: 404 IKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGG 225
           ++V D G GI    +PR+FT    T         P       G G GL + + +     G
Sbjct: 513 VQVKDSGLGINPQDIPRLFTKFAQTQ--------PVATKNSGGSGLGLAICKRFVNLMEG 564

Query: 224 DLQIISMEGYG 192
            + I S EG G
Sbjct: 565 HIWIDS-EGPG 574

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>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 2)
          Length = 489

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -2

Query: 506 VKNSLRAVQE--RYMDSDKDVPPVRIIVADGTEDVTIKVSDEGG 381
           +KN L   +E  + +++  +VPPV  IV+DG    T+ V++E G
Sbjct: 97  MKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELG 140

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>ZRAS_KLEOX (Q9APE0) Sensor protein zraS (EC 2.7.13.3)|
          Length = 462

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 22/77 (28%), Positives = 30/77 (38%)
 Frame = -2

Query: 422 GTEDVTIKVSDEGGGIRRSGLPRIFTYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLY 243
           G   V + V+D G G+    L  IFT  +ST  +              G G GL V +  
Sbjct: 382 GDGRVKVSVADSGKGMTAEQLQAIFTPYFSTKAD--------------GTGLGLAVVQNI 427

Query: 242 AQYFGGDLQIISMEGYG 192
            +  GG +   S  G G
Sbjct: 428 VEQHGGTIDAESAPGKG 444

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>EFG_GEOKA (Q5L400) Elongation factor G (EF-G)|
          Length = 692

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 473 YMDSDKDVPPVRIIVADGTEDVTIKVSDE 387
           Y+ S  D+P +R +V D  E+VT + SD+
Sbjct: 277 YLPSPVDIPAIRGVVPDTEEEVTREASDD 305

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>DCTS_BACSU (P96601) Probable C4-dicarboxylate sensor kinase (EC 2.7.13.3)|
          Length = 535

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -2

Query: 524 LMLFELVKNSLRAVQERYMDSDKDVPPVRIIVADGTEDV-TIKVSDEGGGIRRSGLPRIF 348
           ++L  L++N+  +  E     DK +     I  + T+D+  I + D G GI  + +PR++
Sbjct: 424 VLLGNLIENAFGSF-ETVQSEDKRID----ISIEQTDDILAILIEDNGCGIEPTHMPRLY 478

Query: 347 TYLYSTAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAQYFGGDLQIISMEGYGT 189
              ++  K               G G+GL + +       G +++ S  G GT
Sbjct: 479 DKGFTVNKT-------------GGTGYGLYLVKQIIDKGSGTIEVDSHAGQGT 518


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,382,191
Number of Sequences: 219361
Number of extensions: 1619607
Number of successful extensions: 4539
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 4364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4497
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result