ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 59 4e-09
2CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 34 0.11
3CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 34 0.11
4CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 33 0.15
5CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 33 0.25
6CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 prot... 32 0.56
7CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl... 32 0.56
8CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 32 0.56
9CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl... 32 0.56
10CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 32 0.56
11CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 32 0.56
12CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 32 0.56
13CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 32 0.56
14CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 32 0.56
15CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 32 0.56
16CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 32 0.56
17CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 32 0.56
18CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 32 0.56
19CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 32 0.56
20CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 32 0.56
21CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty... 32 0.56
22CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 32 0.56
23CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 32 0.56
24CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 32 0.56
25CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 32 0.56
26CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 32 0.56
27CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 32 0.56
28CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 32 0.56
29CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 32 0.56
30CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 32 0.56
31CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 32 0.56
32CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 32 0.56
33CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 32 0.56
34CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 32 0.56
35CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 32 0.56
36CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 32 0.56
37CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 32 0.56
38CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 32 0.56
39CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 32 0.56
40CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 31 0.95
41CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 31 0.95
42CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 31 0.95
43LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 31 0.95
44CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe... 31 0.95
45CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 31 0.95
46CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl... 31 0.95
47CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl... 31 0.95
48CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 31 0.95
49CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 30 1.2
50CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 30 1.2
51CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 30 1.2
52CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 30 1.2
53CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 30 1.2
54CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 30 1.6
55CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 30 1.6
56CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ... 30 1.6
57LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 30 1.6
58CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 30 2.1
59CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 30 2.1
60CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 30 2.1
61USE1_HUMAN (Q9NZ43) USE1-like protein (Hematopoietic stem/progen... 30 2.1
62CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 30 2.1
63DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC... 30 2.1
64CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 29 3.6
65CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 29 3.6
66CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 29 3.6
67CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 29 3.6
68CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 28 4.7
69NMDE1_RAT (Q00959) Glutamate [NMDA] receptor subunit epsilon 1 p... 28 4.7
70NMDE1_PANTR (Q5IS45) Glutamate [NMDA] receptor subunit epsilon 1... 28 4.7
71NMDE1_MOUSE (P35436) Glutamate [NMDA] receptor subunit epsilon 1... 28 4.7
72NMDE1_HUMAN (Q12879) Glutamate [NMDA] receptor subunit epsilon 1... 28 4.7
73CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 28 6.2
74MURD_XYLFA (Q9PEB0) UDP-N-acetylmuramoylalanine--D-glutamate lig... 28 8.1
75DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin ne... 28 8.1

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLTVISGAAERVPS 164
           GEGP ENL  HLSDPFGNNLLTVI+G AER P+
Sbjct: 247 GEGPVENLAKHLSDPFGNNLLTVIAGTAERAPT 279



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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLT 197
           G GP++NL  HL+DP  NN+LT
Sbjct: 247 GVGPYQNLLDHLADPVNNNVLT 268



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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLL 200
           G+GPFENL  HLSDP+ N ++
Sbjct: 227 GKGPFENLLQHLSDPWHNTIV 247



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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLTVI 191
           G GP ENL  HL+DP+ NN+  VI
Sbjct: 215 GTGPLENLATHLADPWHNNIGDVI 238



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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HLSDP  NN
Sbjct: 238 GKGPLENLADHLSDPVNNN 256



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>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein|
           (Chlorophyll a-b binding of LHCII type I protein) (CAB)
           (LHCP) (Fragment)
          Length = 124

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 94  GKGPLENLADHLADPVNNN 112



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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPLENLADHLADPVNNN 253



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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 176 GKGPLENLADHLADPVNNN 194



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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 225 GKGPLENLADHLADPVNNN 243



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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 234 GKGPIENLADHLTDPVNNN 252



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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 234 GKGPLENLADHLADPVNNN 252



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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 226 GKGPLENLADHLADPVNNN 244



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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 234 GKGPLENLADHLADPVNNN 252



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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 239 GKGPLENLADHLADPVNNN 257



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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)|
           (LHCP) (Fragment)
          Length = 116

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 86  GKGPLENLADHLADPVNNN 104



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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 248 GKGPIENLADHLADPVNNN 266



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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 248 GKGPIENLADHLADPVNNN 266



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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPLENLADHLADPVNNN 255



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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPIENLADHLADPVNNN 255



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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 198 GKGPLENLADHLADPVNNN 216



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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 237 GKGPIENLADHLADPVNNN 255



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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPLENLADHLADPVNNN 254



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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPLENLADHLADPVNNN 254



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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPLENLADHLADPVNNN 254



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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPLENLADHLADPVNNN 254



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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPLENLADHLADPVNNN 254



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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 231 GKGPLENLADHLADPVNNN 249



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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 244 GKGPIENLADHLADPVNNN 262



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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 235 GKGPLENLADHIADPVNNN 253



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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPIENLFDHLADPVANN 253



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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 232 GKGPLENLADHIADPVNNN 250



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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLTVI-----SGAAE 176
           GE P  NL AHL++P G N+ T +     SGA E
Sbjct: 336 GESPLANLSAHLANPIGANITTNLAMFASSGAKE 369



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>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 120 GKGPIENLYDHLADPVANN 138



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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 234 GKGPIENLADHIADPVANN 252



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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 237 GKGPLENLADHIADPVNNN 255



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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 237 GKGPLENLADHIADPVNNN 255



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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 30.8 bits (68), Expect = 0.95
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 236 GKGPIENLYDHLADPVANN 254



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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 235 GKGPIENLSDHINDPVANN 253



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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 207 GKGPIENLSDHIADPVANN 225



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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 238 GKGPLENLNDHLADPVANN 256



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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL DP  NN
Sbjct: 238 GKGPLENLFDHLDDPVANN 256



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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL DP  NN
Sbjct: 237 GKGPLENLADHLVDPVNNN 255



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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL++P  NN
Sbjct: 215 GKGPLENLADHLAEPVNNN 233



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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP +NL  HL+DP  NN
Sbjct: 237 GKGPLDNLVDHLADPVNNN 255



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>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLTVI 191
           GEGP EN   HL DP  +N LT +
Sbjct: 92  GEGPVENWLYHLQDPSAHNGLTAL 115



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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNNLLTVIS 188
           GE P  NL AH ++P G N+ T ++
Sbjct: 307 GESPLANLAAHFANPVGANITTTLA 331



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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 235 GKGPIENLYDHVADPVANN 253



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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 235 GKGPIENLFDHVADPVANN 253



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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+DP  NN
Sbjct: 235 GKGPIENLSDHLADPAVNN 253



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>USE1_HUMAN (Q9NZ43) USE1-like protein (Hematopoietic stem/progenitor cells|
           protein MDS032) (Putative MAPK-activating protein PM26)
           (Protein p31)
          Length = 259

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 54  LFPGKIHTAHHAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSR 206
           L PG++ T       A   + + SR R T   R +  LGT SA PEM V +
Sbjct: 90  LAPGRVPTTARERVPATKTVHLQSRARYTSEMR-SELLGTDSAEPEMDVRK 139



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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  H++DP  NN
Sbjct: 233 GKGPIENLFDHVADPVANN 251



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>DUS10_MOUSE (Q9ESS0) Dual specificity protein phosphatase 10 (EC 3.1.3.48) (EC|
           3.1.3.16) (Mitogen-activated protein kinase phosphatase
           5) (MAP kinase phosphatase 5) (MKP-5)
          Length = 483

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 77  STSCCIARTHAAEHQQPTAADGQSTASSQAG 169
           STSCC   T+  +HQ  T A    TA++  G
Sbjct: 77  STSCCTVATYDKDHQAQTQAIAAGTATTAIG 107



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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL +P  NN
Sbjct: 235 GKGPLENLLDHLDNPVANN 253



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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP +NL  HL+DP  NN
Sbjct: 226 GKGPIQNLADHLADPGTNN 244



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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL+ P  NN
Sbjct: 233 GKGPLENLADHLAGPVNNN 251



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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP E+L  H++DP  NN
Sbjct: 236 GKGPLEDLADHIADPVNNN 254



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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP +NL  H++DP  NN
Sbjct: 235 GKGPIQNLYDHVADPVANN 253



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>NMDE1_RAT (Q00959) Glutamate [NMDA] receptor subunit epsilon 1 precursor|
           (N-methyl D-aspartate receptor subtype 2A) (NR2A)
           (NMDAR2A)
          Length = 1464

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   MFLLPLIIYTYGTFVLSYFSPVKFTQHI 84
           MF++ LI+     FV  YFSPV + +++
Sbjct: 561 MFVMLLIVSAIAVFVFEYFSPVGYNRNL 588



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>NMDE1_PANTR (Q5IS45) Glutamate [NMDA] receptor subunit epsilon 1 precursor|
           (N-methyl D-aspartate receptor subtype 2A) (NR2A)
           (NMDAR2A)
          Length = 1464

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   MFLLPLIIYTYGTFVLSYFSPVKFTQHI 84
           MF++ LI+     FV  YFSPV + +++
Sbjct: 561 MFVMLLIVSAIAVFVFEYFSPVGYNRNL 588



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>NMDE1_MOUSE (P35436) Glutamate [NMDA] receptor subunit epsilon 1 precursor|
           (N-methyl D-aspartate receptor subtype 2A) (NR2A)
           (NMDAR2A)
          Length = 1464

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   MFLLPLIIYTYGTFVLSYFSPVKFTQHI 84
           MF++ LI+     FV  YFSPV + +++
Sbjct: 561 MFVMLLIVSAIAVFVFEYFSPVGYNRNL 588



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>NMDE1_HUMAN (Q12879) Glutamate [NMDA] receptor subunit epsilon 1 precursor|
           (N-methyl D-aspartate receptor subtype 2A) (NR2A)
           (NMDAR2A) (hNR2A)
          Length = 1464

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   MFLLPLIIYTYGTFVLSYFSPVKFTQHI 84
           MF++ LI+     FV  YFSPV + +++
Sbjct: 561 MFVMLLIVSAIAVFVFEYFSPVGYNRNL 588



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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 262 GEGPFENLCAHLSDPFGNN 206
           G+GP ENL  HL++P  NN
Sbjct: 244 GKGPIENLTDHLANPAENN 262



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>MURD_XYLFA (Q9PEB0) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 468

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +3

Query: 84  HAASHARMQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSRLLPKGSLRWAHR 242
           H   H   Q  IN +       RP  R+  L+AA     S  LP+  LRW +R
Sbjct: 198 HLDWHGSEQRYINDKLSLVTVTRP--RIALLNAADPRLASLALPQSDLRWFNR 248



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>DCNL4_BRARE (Q5RHX6) DCN1-like protein 4 (Defective in cullin neddylation|
           protein 1-like protein 4) (DCUN1 domain-containing
           protein 4)
          Length = 280

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
 Frame = +2

Query: 38  HSYSHTFPR*N--------SHSTSCCIARTHAAEHQQPTAADGQSTASSQ 163
           H   HT  R N        SH T+CC       + ++PTA D  S   S+
Sbjct: 21  HKIYHTLHRLNLTEDVGPESHGTACCSRAMPPRKKRRPTAGDDLSAKKSR 70


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,997,107
Number of Sequences: 219361
Number of extensions: 569870
Number of successful extensions: 1768
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 80,573,946
effective HSP length: 63
effective length of database: 66,754,203
effective search space used: 1602100872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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