ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
2dbj|AK066022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
3ref|XM_464736.1| Oryza sativa (japonica cultivar-group), mRNA 212 1e-51
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
6dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 107 4e-20
8gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome... 107 4e-20
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
10gb|AY088311.1| Arabidopsis thaliana clone 5504 mRNA, complete se... 52 0.002
11gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 ma... 48 0.034
12ref|NM_187455.1| Oryza sativa (japonica cultivar-group), predic... 46 0.13
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.13
14gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
16dbj|AK101498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
17ref|NM_129555.2| Arabidopsis thaliana binding AT2G39970 mRNA, co... 44 0.53
18gb|AY039858.1| Arabidopsis thaliana At2g39970/T28M21.13 mRNA, co... 44 0.53
19emb|BX820432.1|CNS0A9K1 Arabidopsis thaliana Full-length cDNA Co... 44 0.53
20emb|BX821427.1|CNS0A9AS Arabidopsis thaliana Full-length cDNA Co... 44 0.53
21gb|BT003020.1| Arabidopsis thaliana At2g39970/T28M21.13 gene, co... 44 0.53
22dbj|AB047148.1| Arabidopsis thaliana mRNA for 36kDa-peroxisomal ... 44 0.53
23emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 ... 42 2.1
24dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
25dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
26ref|NM_105681.1| Arabidopsis thaliana kinase AT1G70130 mRNA, com... 40 8.3
27gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, co... 40 8.3
28ref|XM_751431.1| Ustilago maydis 521 hypothetical protein (UM003... 40 8.3
29gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, comple... 40 8.3
30emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on ch... 40 8.3
31emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chr... 40 8.3
32gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complet... 40 8.3
33gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complet... 40 8.3
34gb|AC011337.5| Homo sapiens chromosome 5 clone CTC-251D13, compl... 40 8.3
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.3
36emb|BX088718.7| Zebrafish DNA sequence from clone DKEY-185E18, c... 40 8.3
37dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
38dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
39gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thali... 40 8.3 
>dbj|AK104878.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E12, full
            insert sequence
          Length = 1329

 Score =  440 bits (222), Expect = e-120
 Identities = 387/442 (87%)
 Strand = Plus / Minus

                                                                        
Query: 170  accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
            ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 1155 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 1096

                                                                        
Query: 230  taaaatccgtgcaatccctcgtagcgaatcatcttcaatatcgcatccaatgtacctgta 289
            ||||| ||||||||||| || || || |||||||| |  ||||| || |  |||||||| 
Sbjct: 1095 taaaacccgtgcaatccttcataccggatcatctttatgatcgcgtcaatcgtacctgtg 1036

                                                                        
Query: 290  tatctggacgccgcgtttctgccaatttcttgttttgcctgcaacctagacttgaccact 349
            |||||||||  | | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 1035 tatctggacatcacattcctgccaatttcttgttttgcttgcaacctagacttaaccact 976

                                                                        
Query: 350  aacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaaaatacc 409
            | ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 975  agcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataagaatacc 916

                                                                        
Query: 410  tccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactggagacgc 469
            ||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| ||||||||
Sbjct: 915  tccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccggagacgc 856

                                                                        
Query: 470  tttgacagcgtttcatatatcataaactgaattgatggattgcataccataattagtgtc 529
            |||| ||  |||||||| |||||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 855  tttgccaatgtttcatagatcataaattgaattgatggattacataccataattagtgtt 796

                                                                        
Query: 530  ggaataagtcctttccagaatccacttatgcctgattcacgatagacttcccggatcgct 589
            ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||
Sbjct: 795  ggaataagtcctttccagaatcctcttatgcctgattcacggtagacctcccggaccgct 736

                                  
Query: 590  tgaattgtgccatatgggcgag 611
            |||||||| |||||||| ||||
Sbjct: 735  tgaattgtcccatatggacgag 714
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>dbj|AK066022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050L01, full
            insert sequence
          Length = 1354

 Score =  440 bits (222), Expect = e-120
 Identities = 387/442 (87%)
 Strand = Plus / Minus

                                                                        
Query: 170  accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
            ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 1162 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 1103

                                                                        
Query: 230  taaaatccgtgcaatccctcgtagcgaatcatcttcaatatcgcatccaatgtacctgta 289
            ||||| ||||||||||| || || || |||||||| |  ||||| || |  |||||||| 
Sbjct: 1102 taaaacccgtgcaatccttcataccggatcatctttatgatcgcgtcaatcgtacctgtg 1043

                                                                        
Query: 290  tatctggacgccgcgtttctgccaatttcttgttttgcctgcaacctagacttgaccact 349
            |||||||||  | | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 1042 tatctggacatcacattcctgccaatttcttgttttgcttgcaacctagacttaaccact 983

                                                                        
Query: 350  aacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaaaatacc 409
            | ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 982  agcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataagaatacc 923

                                                                        
Query: 410  tccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactggagacgc 469
            ||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| ||||||||
Sbjct: 922  tccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccggagacgc 863

                                                                        
Query: 470  tttgacagcgtttcatatatcataaactgaattgatggattgcataccataattagtgtc 529
            |||| ||  |||||||| |||||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 862  tttgccaatgtttcatagatcataaattgaattgatggattacataccataattagtgtt 803

                                                                        
Query: 530  ggaataagtcctttccagaatccacttatgcctgattcacgatagacttcccggatcgct 589
            ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||
Sbjct: 802  ggaataagtcctttccagaatcctcttatgcctgattcacggtagacctcccggaccgct 743

                                  
Query: 590  tgaattgtgccatatgggcgag 611
            |||||||| |||||||| ||||
Sbjct: 742  tgaattgtcccatatggacgag 721
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>ref|XM_464736.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 822

 Score =  212 bits (107), Expect = 1e-51
 Identities = 179/203 (88%)
 Strand = Plus / Minus

                                                                       
Query: 409 ctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactggagacg 468
           |||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||||||
Sbjct: 792 ctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccggagacg 733

                                                                       
Query: 469 ctttgacagcgtttcatatatcataaactgaattgatggattgcataccataattagtgt 528
           ||||| ||  |||||||| |||||||| || ||||||||||| |||||||||||||||||
Sbjct: 732 ctttgccaatgtttcatagatcataaattgtattgatggattacataccataattagtgt 673

                                                                       
Query: 529 cggaataagtcctttccagaatccacttatgcctgattcacgatagacttcccggatcgc 588
           |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||
Sbjct: 672 cggaataagtcctttccagaatcctcttatgcctgattcacggtagacctcccggaccgc 613

                                  
Query: 589 ttgaattgtgccatatgggcgag 611
           ||||||||| |||||||| ||||
Sbjct: 612 ttgaattgtcccatatggacgag 590
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 2e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                           
Query: 515     accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
               |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 7021308 accataattagtgtcggaataagtcctttccagaatcctcttatgcctgattcacggtag 7021249

                         
Query: 575     acttcccgga 584
               || |||||||
Sbjct: 7021248 acctcccgga 7021239



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                           
Query: 170     accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
               ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 7023145 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 7023086

                                                  
Query: 230     taaaatccgtgcaatccctcgtagcgaatcatctt 264
               ||||| ||||||||||| || || || ||||||||
Sbjct: 7023085 taaaacccgtgcaatccttcataccggatcatctt 7023051



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                           
Query: 344     accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
               ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 7022192 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 7022133

                      
Query: 404     aatacct 410
               |||||||
Sbjct: 7022132 aatacct 7022126



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                           
Query: 405     atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
               |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 7021503 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 7021444

                                                                    
Query: 465     gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
               ||||||||| ||  |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 7021443 gacgctttgccaatgtttcatagatcataaattgtattgatggattacatacc 7021391



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                 
Query: 308     ctgccaatttcttgttttgcctgcaacctagact 341
               |||||||||||||||||||| |||||||||||||
Sbjct: 7022774 ctgccaatttcttgttttgcttgcaacctagact 7022741
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>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0495C02
          Length = 151467

 Score =  115 bits (58), Expect = 2e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                         
Query: 515   accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 24727 accataattagtgtcggaataagtcctttccagaatcctcttatgcctgattcacggtag 24668

                       
Query: 575   acttcccgga 584
             || |||||||
Sbjct: 24667 acctcccgga 24658



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 170   accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
             ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 26564 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 26505

                                                
Query: 230   taaaatccgtgcaatccctcgtagcgaatcatctt 264
             ||||| ||||||||||| || || || ||||||||
Sbjct: 26504 taaaacccgtgcaatccttcataccggatcatctt 26470



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                         
Query: 344   accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
             ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 25611 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 25552

                    
Query: 404   aatacct 410
             |||||||
Sbjct: 25551 aatacct 25545



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                         
Query: 405   atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
             |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 24922 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 24863

                                                                  
Query: 465   gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
             ||||||||| ||  |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 24862 gacgctttgccaatgtttcatagatcataaattgtattgatggattacatacc 24810



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 308   ctgccaatttcttgttttgcctgcaacctagact 341
             |||||||||||||||||||| |||||||||||||
Sbjct: 26193 ctgccaatttcttgttttgcttgcaacctagact 26160
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>dbj|AP004779.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0470A03
          Length = 133167

 Score =  115 bits (58), Expect = 2e-22
 Identities = 67/70 (95%)
 Strand = Plus / Minus

                                                                          
Query: 515    accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
              |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 114930 accataattagtgtcggaataagtcctttccagaatcctcttatgcctgattcacggtag 114871

                        
Query: 575    acttcccgga 584
              || |||||||
Sbjct: 114870 acctcccgga 114861



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                          
Query: 170    accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
              ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 116767 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 116708

                                                 
Query: 230    taaaatccgtgcaatccctcgtagcgaatcatctt 264
              ||||| ||||||||||| || || || ||||||||
Sbjct: 116707 taaaacccgtgcaatccttcataccggatcatctt 116673



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                          
Query: 344    accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
              ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 115814 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 115755

                     
Query: 404    aatacct 410
              |||||||
Sbjct: 115754 aatacct 115748



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                          
Query: 405    atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
              |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 115125 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 115066

                                                                   
Query: 465    gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
              ||||||||| ||  |||||||| |||||||| || ||||||||||| ||||||
Sbjct: 115065 gacgctttgccaatgtttcatagatcataaattgtattgatggattacatacc 115013



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 308    ctgccaatttcttgttttgcctgcaacctagact 341
              |||||||||||||||||||| |||||||||||||
Sbjct: 116396 ctgccaatttcttgttttgcttgcaacctagact 116363
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>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                          
Query: 515    accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
              |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 154618 accataattagtgttggaataagtcctttccagaatcctcttatgcctgattcacggtag 154677

                        
Query: 575    acttcccgga 584
              || |||||||
Sbjct: 154678 acctcccgga 154687



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                          
Query: 170    accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
              ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 152798 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 152857

                                                 
Query: 230    taaaatccgtgcaatccctcgtagcgaatcatctt 264
              ||||| ||||||||||| || || || ||||||||
Sbjct: 152858 taaaacccgtgcaatccttcataccggatcatctt 152892



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                          
Query: 344    accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
              ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 153739 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 153798

                     
Query: 404    aatacct 410
              |||||||
Sbjct: 153799 aatacct 153805



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                          
Query: 405    atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
              |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 154422 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 154481

                                                                   
Query: 465    gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
              ||||||||| ||  |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 154482 gacgctttgccaatgtttcatagatcataaattgaattgatggattacatacc 154534



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                          
Query: 282    tacctgtatatctggacgccgcgtttctgccaatttcttgttttgcctgcaacctagact 341
              ||||||| |||||||||  | | || |||||||||||||||||||| |||||||||||||
Sbjct: 153147 tacctgtgtatctggacatcacattcctgccaatttcttgttttgcttgcaacctagact 153206
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>gb|AC137595.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0094K23, complete sequence
          Length = 167482

 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                         
Query: 515   accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
             |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 30799 accataattagtgttggaataagtcctttccagaatcctcttatgcctgattcacggtag 30858

                       
Query: 575   acttcccgga 584
             || |||||||
Sbjct: 30859 acctcccgga 30868



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                         
Query: 170   accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
             ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 28979 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 29038

                                                
Query: 230   taaaatccgtgcaatccctcgtagcgaatcatctt 264
             ||||| ||||||||||| || || || ||||||||
Sbjct: 29039 taaaacccgtgcaatccttcataccggatcatctt 29073



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                         
Query: 344   accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
             ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 29920 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 29979

                    
Query: 404   aatacct 410
             |||||||
Sbjct: 29980 aatacct 29986



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                         
Query: 405   atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
             |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 30603 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 30662

                                                                  
Query: 465   gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
             ||||||||| ||  |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 30663 gacgctttgccaatgtttcatagatcataaattgaattgatggattacatacc 30715



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 282   tacctgtatatctggacgccgcgtttctgccaatttcttgttttgcctgcaacctagact 341
             ||||||| |||||||||  | | || |||||||||||||||||||| |||||||||||||
Sbjct: 29328 tacctgtgtatctggacatcacattcctgccaatttcttgttttgcttgcaacctagact 29387
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  107 bits (54), Expect = 4e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                            
Query: 515      accataattagtgtcggaataagtcctttccagaatccacttatgcctgattcacgatag 574
                |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 19435392 accataattagtgttggaataagtcctttccagaatcctcttatgcctgattcacggtag 19435451

                          
Query: 575      acttcccgga 584
                || |||||||
Sbjct: 19435452 acctcccgga 19435461



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                            
Query: 170      accataaaaaggaccgaggcggcaaaaacactctgtacaatctttgtgcccattcctttg 229
                ||||||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 19433572 accataaaaagaactgaggcggcaaagacgctctgtacaatcttcgtacccattcctttg 19433631

                                                   
Query: 230      taaaatccgtgcaatccctcgtagcgaatcatctt 264
                ||||| ||||||||||| || || || ||||||||
Sbjct: 19433632 taaaacccgtgcaatccttcataccggatcatctt 19433666



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                            
Query: 344      accactaacaacgggtaggtcacaacagtagctcccagctttgctattgcacctaataaa 403
                ||||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 19434513 accactagcaatgggtatgtcacaacagtagctccgagctttgctattgcacctaataag 19434572

                       
Query: 404      aatacct 410
                |||||||
Sbjct: 19434573 aatacct 19434579



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                            
Query: 405      atacctccatagcagtgatgttcttcttggggaatcgctttccagaccgcttcgactgga 464
                |||||||||||||||| | |||||| || |||| |  ||||||||| | ||| ||| |||
Sbjct: 19435196 atacctccatagcagtaaggttcttttttgggagttcctttccagatctctttgaccgga 19435255

                                                                     
Query: 465      gacgctttgacagcgtttcatatatcataaactgaattgatggattgcatacc 517
                ||||||||| ||  |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 19435256 gacgctttgccaatgtttcatagatcataaattgaattgatggattacatacc 19435308



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 282      tacctgtatatctggacgccgcgtttctgccaatttcttgttttgcctgcaacctagact 341
                ||||||| |||||||||  | | || |||||||||||||||||||| |||||||||||||
Sbjct: 19433921 tacctgtgtatctggacatcacattcctgccaatttcttgttttgcttgcaacctagact 19433980



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 212      tttgtgcccattcctttgta 231
                ||||||||||||||||||||
Sbjct: 13862103 tttgtgcccattcctttgta 13862122
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>gb|AY088311.1| Arabidopsis thaliana clone 5504 mRNA, complete sequence
          Length = 1359

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 194  aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
            ||||| ||||| ||||||||||||| ||| ||||||||||| ||||
Sbjct: 1092 aaaacgctctgcacaatctttgtgctcatacctttgtaaaacccgt 1047
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>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete
             sequence
          Length = 108847

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                         
Query: 194   aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgtgcaatccctcgtag 253
             ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||  |  || || || 
Sbjct: 52769 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgtaaagcccttcatat 52828

                                                 
Query: 254   cgaatcatcttcaatatcgcatccaatgtacctgta 289
             |||||||| ||||  ||||| |||||||| ||||||
Sbjct: 52829 cgaatcattttcagaatcgcgtccaatgttcctgta 52864
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>ref|NM_187455.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 191 gcaaaaacactctgtacaatctttgtgcccattcctttgtaaa 233
           ||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct: 926 gcaaaaacactttgtacgatttttgtgctcattcctttataaa 884
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 191     gcaaaaacactctgtacaatctttgtgcccattcctttgtaaa 233
               ||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct: 8724757 gcaaaaacactttgtacgatttttgtgctcattcctttataaa 8724715
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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 191   gcaaaaacactctgtacaatctttgtgcccattcctttgtaaa 233
             ||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct: 68408 gcaaaaacactttgtacgatttttgtgctcattcctttataaa 68366
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 191     gcaaaaacactctgtacaatctttgtgcccattcctttgtaaa 233
               ||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct: 8722592 gcaaaaacactttgtacgatttttgtgctcattcctttataaa 8722550
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>dbj|AK101498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043H11, full
           insert sequence
          Length = 1418

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 191 gcaaaaacactctgtacaatctttgtgcccattcctttgtaaa 233
           ||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct: 995 gcaaaaacactttgtacgatttttgtgctcattcctttataaa 953
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>ref|NM_129555.2| Arabidopsis thaliana binding AT2G39970 mRNA, complete cds
          Length = 1368

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 194  aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
            ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 1092 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 1047
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>gb|AY039858.1| Arabidopsis thaliana At2g39970/T28M21.13 mRNA, complete cds
          Length = 1331

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 194  aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
            ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 1062 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 1017
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>emb|BX820432.1|CNS0A9K1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH32ZB05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1307

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 194  aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
            ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 1080 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 1035
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>emb|BX821427.1|CNS0A9AS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL40ZG09 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1255

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 194  aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
            ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 1038 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 993
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>gb|BT003020.1| Arabidopsis thaliana At2g39970/T28M21.13 gene, complete cds
          Length = 996

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 194 aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
           ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 914 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 869
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>dbj|AB047148.1| Arabidopsis thaliana mRNA for 36kDa-peroxisomal membrane protein
           (PMP36), complete cds
          Length = 996

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 194 aaaacactctgtacaatctttgtgcccattcctttgtaaaatccgt 239
           ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||
Sbjct: 914 aaaacgctctgcacaatctttgtgctcatccctttataaaacccgt 869
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>emb|CR352226.16| Zebrafish DNA sequence from clone CH211-209L18 in linkage group 22,
             complete sequence
          Length = 209197

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    ataaaataatctgatcacaaa 80
             |||||||||||||||||||||
Sbjct: 14643 ataaaataatctgatcacaaa 14623
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        tttctgactaataaagaactg 21
                |||||||||||||||||||||
Sbjct: 20061961 tttctgactaataaagaactg 20061941
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>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1068H08
          Length = 152794

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     tttctgactaataaagaactg 21
             |||||||||||||||||||||
Sbjct: 50235 tttctgactaataaagaactg 50215
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>ref|NM_105681.1| Arabidopsis thaliana kinase AT1G70130 mRNA, complete cds
          Length = 1971

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 aacttgaccagctcctcctt 168
           ||||||||||||||||||||
Sbjct: 195 aacttgaccagctcctcctt 176
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>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence
          Length = 246043

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    aactgaattgatggattgca 513
              ||||||||||||||||||||
Sbjct: 115780 aactgaattgatggattgca 115799
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>ref|XM_751431.1| Ustilago maydis 521 hypothetical protein (UM00377.1) partial mRNA
          Length = 1857

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 300 ccgcgtttctgccaatttcttgtt 323
           |||||||||||||||| |||||||
Sbjct: 666 ccgcgtttctgccaatgtcttgtt 689
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>gb|AC092032.5| Homo sapiens BAC clone RP11-730B22 from 7, complete sequence
          Length = 176398

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    ctttgtaaaatccgtgcaat 244
              ||||||||||||||||||||
Sbjct: 124150 ctttgtaaaatccgtgcaat 124131
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>emb|AL713914.10| Mouse DNA sequence from clone RP24-293E17 on chromosome 11 Contains the
             3' end of the Cobl gene for cordon-bleu and a novel gene,
             complete sequence
          Length = 188406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   gatctagtaagaagcagagt 120
             ||||||||||||||||||||
Sbjct: 49498 gatctagtaagaagcagagt 49479
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>emb|AL646095.27| Mouse DNA sequence from clone RP23-17P18 on chromosome 11 Contains the
             3' end of the Asb3 gene for ankyrin repeat and SOCS
             box-containing protein 3 and two zinc finger protein
             pseudogenes, complete sequence
          Length = 173655

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agctcctccttcaccataaa 177
             ||||||||||||||||||||
Sbjct: 30873 agctcctccttcaccataaa 30892
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>gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complete sequence
          Length = 152118

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 505    tggattgcataccataatta 524
              ||||||||||||||||||||
Sbjct: 107662 tggattgcataccataatta 107681
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>gb|AC079349.6| Homo sapiens BAC clone RP11-436A7 from 4, complete sequence
          Length = 193632

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 505    tggattgcataccataatta 524
              ||||||||||||||||||||
Sbjct: 136270 tggattgcataccataatta 136251
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>gb|AC011337.5| Homo sapiens chromosome 5 clone CTC-251D13, complete sequence
          Length = 94625

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   atcatcttcaatatcgcatccaat 280
             ||||||||||||||| ||||||||
Sbjct: 51343 atcatcttcaatatcccatccaat 51320
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     acttgaccagctcctccttc 169
               ||||||||||||||||||||
Sbjct: 3961790 acttgaccagctcctccttc 3961771
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>emb|BX088718.7| Zebrafish DNA sequence from clone DKEY-185E18, complete sequence
          Length = 192836

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    taataaaaatacctccatag 416
              ||||||||||||||||||||
Sbjct: 152432 taataaaaatacctccatag 152451
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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1655_B12
          Length = 132736

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    tttgtgcccattcctttgta 231
              ||||||||||||||||||||
Sbjct: 111587 tttgtgcccattcctttgta 111606
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>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0435D08
          Length = 148912

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   tttgtgcccattcctttgta 231
             ||||||||||||||||||||
Sbjct: 15780 tttgtgcccattcctttgta 15799
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>gb|AC002062.1|F20P5 Sequence of BAC F20P5 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 114505

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   aacttgaccagctcctcctt 168
             ||||||||||||||||||||
Sbjct: 51081 aacttgaccagctcctcctt 51062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,569,696
Number of Sequences: 3902068
Number of extensions: 5569696
Number of successful extensions: 115059
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114749
Number of HSP's gapped (non-prelim): 308
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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