ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL355357.13| Human DNA sequence from clone RP11-69I22 on chr... 46 0.10
2gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5... 44 0.41
3gb|AC161250.2| Mus musculus BAC clone RP24-553E23 from chromosom... 44 0.41
4gb|AY216264.1| Plasmodium falciparum D6 adenosine deaminase mRNA... 44 0.41
5gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, comp... 44 0.41
6gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosom... 42 1.6
7gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Can... 42 1.6
8gb|AC159747.8| Mus musculus 10 BAC RP23-416G20 (Roswell Park Can... 42 1.6
9gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Canc... 42 1.6
10emb|CT573090.2| RP43-052E01, complete sequence 42 1.6
11gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, comple... 42 1.6
12emb|Y12462.1|MMDNASEL1 M.musculus selel gene, promoter sequence ... 42 1.6
13ref|XM_632153.1| Dictyostelium discoideum hypothetical protein (... 40 6.3
14gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome... 40 6.3
15gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosom... 40 6.3
16emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 40 6.3
17emb|BX901913.8| Zebrafish DNA sequence from clone CH211-241E15 i... 40 6.3
18emb|AL139247.12| Human DNA sequence from clone RP1-52J10 on chro... 40 6.3
19gb|AC152893.4| Saimiri boliviensis boliviensis clone CH254-211C3... 40 6.3
20ref|NM_136775.2| Drosophila melanogaster CG12344-RA (CG12344), mRNA 40 6.3
21gb|AY094938.1| Drosophila melanogaster RH55021 full insert cDNA 40 6.3
22dbj|AK141213.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 6.3
23gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosom... 40 6.3
24dbj|AK088050.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.3
25gb|AC092078.2|AC092078 Homo sapiens chromosome 15 clone CTD-2007... 40 6.3
26dbj|AK030823.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 6.3
27dbj|AK030822.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 6.3
28gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome 2R, r... 40 6.3
29emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chro... 40 6.3
30gb|AC112695.3| Homo sapiens BAC clone RP11-9B6 from 4, complete ... 40 6.3
31gb|AC025167.6|AC025167 Homo sapiens chromosome 15 clone CTD-2556... 40 6.3
32gb|AC008459.7| Homo sapiens chromosome 5 clone CTC-352D11, compl... 40 6.3
33emb|AL954193.12| Mouse DNA sequence from clone RP23-130G4 on chr... 40 6.3
34gb|AC007016.5|AC007016 Homo sapiens chromosome 4 clone C0478G20 ... 40 6.3
35gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22... 40 6.3
36dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.3
37gb|BC014294.1| Mus musculus CD6 antigen, mRNA (cDNA clone MGC:14... 40 6.3
38gb|U35370.1|MMU35370 Mus musculus T cell accessory signal recept... 40 6.3
39ref|NM_001037801.1| Mus musculus CD6 antigen (Cd6), mRNA 40 6.3
40ref|NM_009852.2| Mus musculus CD6 antigen (Cd6), mRNA 40 6.3
41gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, comple... 40 6.3
42gb|U37544.1|MMU37544 Mus musculus T cell surface glycoprotein CD... 40 6.3
43gb|U37543.1|MMU37543 Mus musculus T cell surface glycoprotein CD... 40 6.3
44gb|U12434.1|MMU12434 Mus musculus mscd6 precursor (Cd6) mRNA, co... 40 6.3 
>emb|AL355357.13| Human DNA sequence from clone RP11-69I22 on chromosome 6, complete
             sequence
          Length = 116261

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 57    atagttatccatatatacatacttaaa 83
             ||||||||||| |||||||||||||||
Sbjct: 87534 atagttatccacatatacatacttaaa 87508
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>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete
              sequence
          Length = 252394

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 68     tatatacatacttaaattttacattg 93
              |||||||| |||||||||||||||||
Sbjct: 199812 tatatacacacttaaattttacattg 199837
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>gb|AC161250.2| Mus musculus BAC clone RP24-553E23 from chromosome 9, complete sequence
          Length = 189036

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 66     catatatacatacttaaatttt 87
              ||||||||||||||||||||||
Sbjct: 120512 catatatacatacttaaatttt 120533
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>gb|AY216264.1| Plasmodium falciparum D6 adenosine deaminase mRNA, complete cds
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 68   tatatacatacttaaattttacattg 93
            |||||||| |||||||||||||||||
Sbjct: 989  tatatacacacttaaattttacattg 1014
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>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence
          Length = 245367

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 273   tctagtggacagaatccaaaga 294
             ||||||||||||||||||||||
Sbjct: 66941 tctagtggacagaatccaaaga 66920
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>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence
          Length = 228750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    gcaacatcttcaacattgctt 202
              |||||||||||||||||||||
Sbjct: 149696 gcaacatcttcaacattgctt 149716
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>gb|AC078958.30| Homo sapiens X BAC RP11-609C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 187547

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   agcaacatcttcaacattgct 201
             |||||||||||||||||||||
Sbjct: 21005 agcaacatcttcaacattgct 21025
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>gb|AC159747.8| Mus musculus 10 BAC RP23-416G20 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 194198

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  gaatccaaagaatcattcacc 304
            |||||||||||||||||||||
Sbjct: 4225 gaatccaaagaatcattcacc 4205
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>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 165306

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    gaatccaaagaatcattcacc 304
              |||||||||||||||||||||
Sbjct: 152245 gaatccaaagaatcattcacc 152225
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>emb|CT573090.2| RP43-052E01, complete sequence
          Length = 161118

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   agcaacatcttcaacattgct 201
             |||||||||||||||||||||
Sbjct: 60470 agcaacatcttcaacattgct 60450
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>gb|AC132311.2| Mus musculus BAC clone RP24-297P22 from 8, complete sequence
          Length = 164783

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   gcaacatcttcaacattgctt 202
             |||||||||||||||||||||
Sbjct: 25336 gcaacatcttcaacattgctt 25356
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>emb|Y12462.1|MMDNASEL1 M.musculus selel gene, promoter sequence and part of exon1
          Length = 1868

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 gcaacatcttcaacattgctt 202
           |||||||||||||||||||||
Sbjct: 213 gcaacatcttcaacattgctt 193
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>ref|XM_632153.1| Dictyostelium discoideum hypothetical protein (DDB0219223), partial
           mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 caaatgaaaaaaccaaacat 123
           ||||||||||||||||||||
Sbjct: 767 caaatgaaaaaaccaaacat 786
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>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ccatatatacatacttaaat 84
              ||||||||||||||||||||
Sbjct: 119572 ccatatatacatacttaaat 119553
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>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence
          Length = 217490

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 197    ttgcttccagaggtctttgagtcc 220
              |||||||||||||||| |||||||
Sbjct: 151501 ttgcttccagaggtctctgagtcc 151524
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>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
             complete sequence
          Length = 210207

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    tgtcaatacaaatgaaaaaa 115
             ||||||||||||||||||||
Sbjct: 78486 tgtcaatacaaatgaaaaaa 78505
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>emb|BX901913.8| Zebrafish DNA sequence from clone CH211-241E15 in linkage group 1,
              complete sequence
          Length = 142370

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     ttaaattttacattgtttgt 98
              ||||||||||||||||||||
Sbjct: 131884 ttaaattttacattgtttgt 131903
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>emb|AL139247.12| Human DNA sequence from clone RP1-52J10 on chromosome 1 Contains the
             SPRL3A gene for small proline rich-like (epidermal
             differentiation complex) 3A, the LEP14 gene for late
             envelope protein 14, the LEP13 gene for late envelope
             protein 13, a small proline rich-like (epidermal
             differentiation complex) 1B (SPRL1B) pseudogene, a novel
             gene, the SPRL1A gene for small proline rich-like
             (epidermal differentiation complex) 1A, the LEP11 gene for
             late envelope protein 11 and the SPRL1B gene for small
             proline rich-like (epidermal differentiation complex) 1B,
             complete sequence
          Length = 117084

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   acaaatgaaaaaaccaaaca 122
             ||||||||||||||||||||
Sbjct: 65260 acaaatgaaaaaaccaaaca 65279
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>gb|AC152893.4| Saimiri boliviensis boliviensis clone CH254-211C3, complete sequence
          Length = 122416

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    atatatacatacttaaattt 86
             ||||||||||||||||||||
Sbjct: 75729 atatatacatacttaaattt 75748
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>ref|NM_136775.2| Drosophila melanogaster CG12344-RA (CG12344), mRNA
          Length = 2844

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 tgcttccagaggtctttgag 217
           ||||||||||||||||||||
Sbjct: 596 tgcttccagaggtctttgag 615
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>gb|AY094938.1| Drosophila melanogaster RH55021 full insert cDNA
          Length = 2861

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 tgcttccagaggtctttgag 217
           ||||||||||||||||||||
Sbjct: 597 tgcttccagaggtctttgag 616
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>dbj|AK141213.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:C330008J18 product:CD6 antigen, full insert
            sequence
          Length = 2174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 1822 ttgcttccagaggtctctgagtcc 1845
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>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence
          Length = 199337

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ccatatatacatacttaaat 84
             ||||||||||||||||||||
Sbjct: 18519 ccatatatacatacttaaat 18538
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>dbj|AK088050.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430002N11
            product:CD6 antigen, full insert sequence
          Length = 2894

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2542 ttgcttccagaggtctctgagtcc 2565
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>gb|AC092078.2|AC092078 Homo sapiens chromosome 15 clone CTD-2007H18 map 15q21.1, complete
             sequence
          Length = 113915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    caatacaaatgaaaaaaccaaaca 122
             ||||||||||| ||||||||||||
Sbjct: 34404 caatacaaatgtaaaaaccaaaca 34427
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>dbj|AK030823.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830412L18 product:CD6 antigen, full
            insert sequence
          Length = 3028

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2676 ttgcttccagaggtctctgagtcc 2699
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>dbj|AK030822.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830412L05 product:T-CELL DIFFERENTIATION
            ANTIGEN CD6 PRECURSOR, full insert sequence
          Length = 2998

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2645 ttgcttccagaggtctctgagtcc 2668
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>gb|AC008260.5|AC008260 Drosophila melanogaster, chromosome 2R, region 47B-47C, BAC clone
             BACR13J10, complete sequence
          Length = 140940

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tgcttccagaggtctttgag 217
             ||||||||||||||||||||
Sbjct: 29250 tgcttccagaggtctttgag 29231
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>emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chromosome 2, complete
             sequence
          Length = 56898

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tgtccatcaatgccagtttc 147
             ||||||||||||||||||||
Sbjct: 28920 tgtccatcaatgccagtttc 28901
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>gb|AC112695.3| Homo sapiens BAC clone RP11-9B6 from 4, complete sequence
          Length = 109860

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aaattttacattgtttgtca 100
             ||||||||||||||||||||
Sbjct: 38519 aaattttacattgtttgtca 38538
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>gb|AC025167.6|AC025167 Homo sapiens chromosome 15 clone CTD-2556B7 map 15q21.1, complete
             sequence
          Length = 97990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    caatacaaatgaaaaaaccaaaca 122
             ||||||||||| ||||||||||||
Sbjct: 50045 caatacaaatgtaaaaaccaaaca 50068
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>gb|AC008459.7| Homo sapiens chromosome 5 clone CTC-352D11, complete sequence
          Length = 136581

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aaaaaccaaacattaagtgt 130
             ||||||||||||||||||||
Sbjct: 73039 aaaaaccaaacattaagtgt 73058
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>emb|AL954193.12| Mouse DNA sequence from clone RP23-130G4 on chromosome X, complete
             sequence
          Length = 52879

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ccatatatacatacttaaat 84
             ||||||||||||||||||||
Sbjct: 18032 ccatatatacatacttaaat 18051
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>gb|AC007016.5|AC007016 Homo sapiens chromosome 4 clone C0478G20 map 4p16, complete sequence
          Length = 172568

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    acatagttatccatatatacatac 78
             ||||| ||||||||||||||||||
Sbjct: 16971 acatacttatccatatatacatac 16948
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>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete
              sequence
          Length = 257907

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    tgcttccagaggtctttgag 217
              ||||||||||||||||||||
Sbjct: 190200 tgcttccagaggtctttgag 190181
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>dbj|AP003027.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-25I9, complete
              sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acaaatgaaaaaaccaaaca 122
              ||||||||||||||||||||
Sbjct: 136609 acaaatgaaaaaaccaaaca 136628
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>gb|BC014294.1| Mus musculus CD6 antigen, mRNA (cDNA clone MGC:14018 IMAGE:4187689),
            complete cds
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2680 ttgcttccagaggtctctgagtcc 2703
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>gb|U35370.1|MMU35370 Mus musculus T cell accessory signal receptor (CD6) mRNA, complete
            cds
          Length = 2842

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2474 ttgcttccagaggtctctgagtcc 2497
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>ref|NM_001037801.1| Mus musculus CD6 antigen (Cd6), mRNA
          Length = 2842

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2474 ttgcttccagaggtctctgagtcc 2497
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>ref|NM_009852.2| Mus musculus CD6 antigen (Cd6), mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2680 ttgcttccagaggtctctgagtcc 2703
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>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence
          Length = 179732

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 53     tcacatagttatccatatatacatactt 80
              |||||||  |||||||||||||||||||
Sbjct: 103879 tcacatacatatccatatatacatactt 103906
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>gb|U37544.1|MMU37544 Mus musculus T cell surface glycoprotein CD6 mRNA, complete cds
          Length = 2522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2173 ttgcttccagaggtctctgagtcc 2196
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>gb|U37543.1|MMU37543 Mus musculus T cell surface glycoprotein CD6 mRNA, complete cds
          Length = 2985

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2636 ttgcttccagaggtctctgagtcc 2659
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>gb|U12434.1|MMU12434 Mus musculus mscd6 precursor (Cd6) mRNA, complete cds
          Length = 2583

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 197  ttgcttccagaggtctttgagtcc 220
            |||||||||||||||| |||||||
Sbjct: 2356 ttgcttccagaggtctctgagtcc 2379


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,350,977
Number of Sequences: 3902068
Number of extensions: 5350977
Number of successful extensions: 115392
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115308
Number of HSP's gapped (non-prelim): 84
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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