>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +3

Query: 102 CIDIKACTTHA*AMHGCI*TTSIERAKSTAITCCPGAAASAAHLLGTSATGRTSAHELLS 281
           C    +C++ A +      + S     S A TCC  AAA+AA L GT       A +LL+
Sbjct: 293 CSSASSCSSSASSCS----SASAASTPSGAPTCCASAAAAAALLYGTG-----GAEDLLA 343

Query: 282 -ALPTLITTTWSSAGTFHASFPSLASLAT 365
              P    ++ S A    A  P L+SL T
Sbjct: 344 PGAPCAACSSASCANNAFAFGPELSSLIT 372

>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
          Length = 881

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +3

Query: 159 TTSIERAKSTAITCCPGAAASAAHLLGTSATGRTSAHELLSALPTLITTTWSSAGTFHAS 338
           TT++E + +T IT    A   +   L T+A   T A   ++  PTL  T  S++ T +A 
Sbjct: 542 TTTLENSSTTTIT----AITKSTTTLATTANNSTRAATAVTIDPTLDPTDNSASPTDNAK 597

Query: 339 FPSLASLATTGVA 377
             S    ++TG +
Sbjct: 598 HTSTYGSSSTGAS 610

>YAJR_ECOLI (P77726) Inner membrane transport protein yajR|
          Length = 454

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 330 HASFPSLASLATTGVAFM*NM*RTIWIIPN 419
           HA F  +A LATTG+A       TIW++PN
Sbjct: 165 HALFWMIAILATTGIAL------TIWVVPN 188

>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb|
            protein)
          Length = 1030

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 36   TEQRHCIPCMRESTAPHTLQKGCIDIKACTTHA*AMHGCI*TTSIERAKSTAITCCPGA- 212
            T+   C+ C  +  A   L + C  + AC   A  M  C+   ++   ++  + CC G  
Sbjct: 859  TKIEECVVCSDKKAA--VLFQPCGHMCACENCASLMKKCVQCRAVVERRTPFVLCCGGKG 916

Query: 213  ---AASAAHLLGTSATGRTSAHELLSALPTLITTTWSS 317
               A     L G S +    + +LL   P  +  +WSS
Sbjct: 917  MEDATDDEDLTGGSNSMAGGSQDLLQ--PNNLALSWSS 952

>SYE_SULSO (P95968) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 575

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -1

Query: 503 HPQRRRLVPLRPAHQGQI--RRAPKHPWLHIRDDPDGPLHVLHERDA 369
           H ++R+++P  P  +GQ+  R AP         +PDGPLH+ + R A
Sbjct: 85  HEEKRKVLPPLPNVKGQVVTRFAP---------NPDGPLHLGNARSA 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,580,026
Number of Sequences: 219361
Number of extensions: 1317728
Number of successful extensions: 4257
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4251
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)