>SGAT_ARATH (Q56YA5) Serine--glyoxylate aminotransferase (EC 2.6.1.45)|
           (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44)
           (AGT) (Serine--pyruvate aminotransferase) (EC 2.6.1.51)
          Length = 401

 Score =  186 bits (471), Expect = 5e-47
 Identities = 88/111 (79%), Positives = 101/111 (90%)
 Frame = -1

Query: 553 AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGH 374
           AWGLKNCT+KEE  S+TVTAV+VPP+ID SEIV+ AW+RYNLSLGLGLNKVAGKVFRIGH
Sbjct: 291 AWGLKNCTQKEEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH 350

Query: 373 LGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYLSNSTPLIPSRI 221
           LG++NELQLLGCL GVEM+LKD+GYPV +GSGVAAA+ YL +  PLIPSRI
Sbjct: 351 LGNVNELQLLGCLAGVEMILKDVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401

>SGAA_METEX (P55819) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)|
          Length = 379

 Score =  126 bits (316), Expect = 5e-29
 Identities = 62/101 (61%), Positives = 78/101 (77%)
 Frame = -1

Query: 556 AAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIG 377
           AAWGLK C +  E  SDTVTA++ P  +D+++I+KHA+ RYNL+LG GL++VAGKVFRIG
Sbjct: 271 AAWGLKTCAKSPEWNSDTVTAILAPEGVDAAKIIKHAYVRYNLALGAGLSQVAGKVFRIG 330

Query: 376 HLGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYL 254
           H+G LNEL LLG + G EM L D G  V  GSGVAAA++YL
Sbjct: 331 HVGDLNELSLLGAIAGAEMSLIDNGVKVTPGSGVAAASSYL 371

>SGAA_HYPME (O08374) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)|
          Length = 404

 Score =  119 bits (299), Expect = 4e-27
 Identities = 61/103 (59%), Positives = 75/103 (72%)
 Frame = -1

Query: 553 AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGH 374
           AWGLK C ++ + +SDTV+A++VP  IDS+ I K A+ RYN S GLGLNKVAGKVFRIGH
Sbjct: 286 AWGLKLCAKEPKWYSDTVSAILVPEGIDSNAITKTAYYRYNTSFGLGLNKVAGKVFRIGH 345

Query: 373 LGHLNELQLLGCLGGVEMVLKDIGYPVKLGSGVAAAAAYLSNS 245
           LG L+E+ + G L   EM LKD G  +KLGSG  AAA Y S +
Sbjct: 346 LGMLDEVMIGGALFAAEMALKDNGVNLKLGSGTGAAAEYFSKN 388

>DHSS_ANACY (P16421) Soluble hydrogenase 42 kDa subunit (EC 1.12.-.-) (Tritium|
           exchange subunit)
          Length = 383

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 33/93 (35%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = -1

Query: 523 EENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 344
           +E  S  +TAV  P  +++ +I     KR++++L  G + ++ K+FR+GHLG +++  +L
Sbjct: 292 DECASPAITAVATPG-MEADKIRSLMKKRFDIALAGGQDHLSNKIFRVGHLGFVSDRDIL 350

Query: 343 GCLGGVEMVLKDIGYP-VKLGSGVAAAAAYLSN 248
            C+  +E+VL ++G+     G+GVAAAA   SN
Sbjct: 351 SCIASLEVVLLELGHENFNSGAGVAAAARVFSN 383

>Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-)|
          Length = 385

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 36/91 (39%), Positives = 51/91 (56%)
 Frame = -1

Query: 526 KEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 347
           KE   S TVT+   P  I+ S+       +YN+ +  G   +AGK+FRIGH+G   E ++
Sbjct: 293 KERARSVTVTSAKYPEGIEDSKFRGILSNKYNIVVAGGQKHLAGKIFRIGHMGICGEKEV 352

Query: 346 LGCLGGVEMVLKDIGYPVKLGSGVAAAAAYL 254
           L  L  VE+ LK++G+ VK  SGV  A   L
Sbjct: 353 LATLACVELALKELGFEVK-ESGVEVAKEVL 382

>DHSS_SYNP1 (P14776) Soluble hydrogenase, small subunit (EC 1.12.-.-) (Tritium|
           exchange subunit)
          Length = 384

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -1

Query: 511 SDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLG 332
           S  +TAV  P  +++  I     KR++++L  G + + G++FRIGHLG + +  +L  + 
Sbjct: 296 SPAITAVA-PQGVEAENIRSLMKKRFDIALAGGQDHLKGQIFRIGHLGFVGDRDILAAVS 354

Query: 331 GVEMVLKDIGYP-VKLGSGVAAAAAYLSNS 245
            +E VL ++GY     G+GVAAA+  LS +
Sbjct: 355 ALEAVLAELGYTNFTPGAGVAAASRVLSTA 384

>SGAT_MAIZE (P84187) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)|
           (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44)
           (AGT) (Fragments)
          Length = 136

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 28/62 (45%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
 Frame = -1

Query: 463 EIVKHAW---KRYNLSLGLGLNKVA-GKVFRIGHLGHLNELQLLGCLGGVEMVLKDIGYP 296
           E+   AW    RYNLSLGLGLNKVA GKVFR                        D+GYP
Sbjct: 99  ELAVEAWGLSNRYNLSLGLGLNKVAGGKVFR------------------------DVGYP 134

Query: 295 VK 290
           VK
Sbjct: 135 VK 136

>PUCG_BACSU (O32148) Purine catabolism protein pucG (EC 2.-.-.-)|
          Length = 416

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -1

Query: 502 VTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLGH-LNELQLLGCLGGV 326
           VT V +P  ID   +      ++ + +      +AGK++RIG +G+   +  +L  L G+
Sbjct: 324 VTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGL 383

Query: 325 EMVLKDIGYPVKLGSGVAAAAAYLSNS 245
           E VL      ++ G  + AA     N+
Sbjct: 384 EAVLLRHNAGIEAGKALQAALDVYENA 410

>SPYA_CALJA (P31029) Serine--pyruvate aminotransferase, mitochondrial precursor|
           (EC 2.6.1.51) (SPT) (Alanine--glyoxylate
           aminotransferase) (EC 2.6.1.44) (AGT)
          Length = 414

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -1

Query: 505 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 368
           TVT V VP   D  +IV +  +R+ + +  GL    GKV RIG +G
Sbjct: 342 TVTTVAVPTGYDWRDIVSYLIERFGIEITGGLGPSTGKVLRIGLMG 387

>SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondrial precursor|
           (EC 2.6.1.51) (SPT) (Alanine--glyoxylate
           aminotransferase) (EC 2.6.1.44) (AGT)
          Length = 414

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = -1

Query: 547 GLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 368
           GLK   +  E    T+T V VP   +  +IV +    +N+ +  GL     KV RIG LG
Sbjct: 328 GLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFNIEISGGLGPSEDKVLRIGLLG 387

Query: 367 H 365
           +
Sbjct: 388 Y 388

>SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochondrial precursor|
           (EC 2.6.1.51) (SPT) (Alanine--glyoxylate
           aminotransferase) (EC 2.6.1.44) (AGT)
          Length = 414

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 505 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 368
           TVT V VP   D  +IV +    +++ +  GL    GKV RIG LG
Sbjct: 342 TVTTVAVPAGYDWRDIVNYVMDHFDIEITGGLGPSMGKVLRIGLLG 387

>SPYA_HUMAN (P21549) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)|
           (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44)
           (AGT)
          Length = 392

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 505 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 368
           TVT V VP   D  +IV +    +++ +  GL    GKV RIG LG
Sbjct: 320 TVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLG 365

>SPYA_RABIT (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)|
           (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44)
           (AGT)
          Length = 392

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 505 TVTAVVVPPYIDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIGHLG 368
           TVT V+VP      +IV +    + + +  GL   A KV RIG LG
Sbjct: 320 TVTTVIVPASYRWRDIVSYVMHHFGIEITGGLGPSADKVLRIGLLG 365

>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 247 NSRGTPPRPPRRCQAS-PGTRCP*APSPPRRG 339
           N+R  PP PP R      G R P  P PPRRG
Sbjct: 320 NNRPVPPPPPMRTTTEGSGVRLPAPPPPPRRG 351

>F100A_RAT (Q6AXN0) Protein FAM100A|
          Length = 176

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 249 FERYAAAAATPLPSFTGYPMSLSTISTPPRQPRSCSSLRWPRWP 380
           F R  A+ +      +G PM+ S  S PP  P +  S   P WP
Sbjct: 81  FSRLKASESFHSGGSSGSPMATSATSPPPHFPHATGSFATPSWP 124

>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC|
           3.4.22.-) (p150); RNA-directed RNA polymerase/helicase
           (EC 2.7.7.48) (EC 3.6.1.-) (p90)]
          Length = 2115

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 247 NSRGTPPRPPRRCQASPGTRCP*APSPPRRGNP 345
           ++RGTPP  P R    P    P  P+PPR G+P
Sbjct: 740 DARGTPPPAPAR---DPPPPAPSPPAPPRAGDP 769

>YGHE_ECOLI (Q46833) Putative general secretion pathway protein L-type yghE|
          Length = 286

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +3

Query: 225 LEGMRGVEFERYAAAAATPLPSFTGYPMSLSTISTPPRQPRSCSSLRWPRWPI 383
           L    G + ER    A   LP+ T Y      + T P QPR     +W RW +
Sbjct: 87  LSAWAGADAERLTVTA---LPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRV 136

>UCN1_HUMAN (P55089) Urocortin precursor|
          Length = 124

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -3

Query: 338 PRRGGDGAQGHRVPGEAWQRRGGRGGVPLEFHAPHPLQNLSKFHAQKQGGREEKNK 171
           PRR G G  G    GE  +R      + L FH    L  L++  +Q++  R E+N+
Sbjct: 63  PRRAGPGRLGLGTAGERPRRDNPSLSIDLTFHLLRTLLELARTQSQRE--RAEQNR 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,435,646
Number of Sequences: 219361
Number of extensions: 1424583
Number of successful extensions: 5676
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5654
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)