Clone Name | rbah61e23 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_467364.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1104 Score = 367 bits (185), Expect = 2e-98 Identities = 281/314 (89%) Strand = Plus / Minus Query: 157 acgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctgggggaatacgatc 216 |||||||||||||| || || || ||||||||||||||||| ||||||||||||||||| Sbjct: 1091 acgtgaagcatgatagcattctgggcgtgcattctgttctcagcctgggggaatacgatt 1032 Query: 217 gagttgggagcctcgatggcaccgtctgttacctncacccctctctccgcaggcaaacag 276 ||||||||||| || ||||| ||||||||||||| | ||||||||| ||||||||||| Sbjct: 1031 gagttgggagcttcaatggcgccgtctgttacctctatccctctctctgcaggcaaacaa 972 Query: 277 tgcatcangaaggcttttggaccagccatctccatcagggcttcatcaaccatgaatcct 336 ||||| | |||||| ||||| |||||||||||||||| |||||||| ||| |||||||| Sbjct: 971 tgcataaggaaggcatttggcccagccatctccatcatagcttcatccaccgtgaatcct 912 Query: 337 tggaatacttgtttcctatattcagcttcctccttttggcccatgctggcccaaacatnt 396 ||||| |||| ||| |||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 911 tggaacactttttttctatattcagcttcctccttttggcccatgctggcccagacatct 852 Query: 397 gtatacacaacatctgctcccttaactgcttccttgggatcatttgttatttcaatctta 456 ||||||||||||||||||||||||||||||||| | || |||| |||||||||||||||| Sbjct: 851 gtatacacaacatctgctcccttaactgcttccatagggtcatctgttatttcaatctta 792 Query: 457 ctttcagcactcct 470 || |||||||||| Sbjct: 791 ctaccagcactcct 778
>gb|BT018193.1| Zea mays clone EL01N0559B01.c mRNA sequence Length = 1522 Score = 287 bits (145), Expect = 2e-74 Identities = 273/314 (86%), Gaps = 2/314 (0%) Strand = Plus / Minus Query: 146 aagctccgagcacgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctggg 205 |||| ||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||| Sbjct: 1293 aagcaccgagaacgtgaagcatgatggcgttctgagcgtgcattctgttctcagcctggg 1234 Query: 206 ggaatacgatcgagttgggagcctcgatggcaccgtctgttacctncacccctctctccg 265 |||| ||||| || || ||||||||||||||||||||||| |||| ||| |||||||| | Sbjct: 1233 ggaacacgattgaatttggagcctcgatggcaccgtctgtcacctccactcctctctctg 1174 Query: 266 caggcaaacagtgcatcangaaggcttttggaccagccatctccatcagggcttcatcaa 325 || ||||||||||| | | |||| | || ||||| ||||||||||||| |||||| | Sbjct: 1173 gggggaaacagtgcataagggaggcctgggggccagcaatctccatcaggggttcatcca 1114 Query: 326 ccatgaatccttggaa-tacttgtttcctatattcagcttcctccttttggcccatgctg 384 || |||||| ||||| | || ||||| |||| |||||||| ||||| |||||||||||| Sbjct: 1113 ccgggaatccctggaacttctggtttc-tataatcagcttcttccttctggcccatgctg 1055 Query: 385 gcccaaacatntgtatacacaacatctgctcccttaactgcttccttgggatcatttgtt 444 |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| | Sbjct: 1054 gcccaaacatctgtatacacaacatctgctcccttaactgcttccctgggatcgtttggt 995 Query: 445 atttcaatcttact 458 |||||||||||||| Sbjct: 994 atttcaatcttact 981
>gb|AY111640.1| Zea mays CL11744_1 mRNA sequence Length = 736 Score = 264 bits (133), Expect = 2e-67 Identities = 266/313 (84%) Strand = Plus / Plus Query: 146 aagctccgagcacgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctggg 205 |||| |||||||||||||||||||| ||||| || ||||||||||||||||| |||| Sbjct: 222 aagcaccgagcacgtgaagcatgatggcgttctgagcgtgcattctgttctcagcctnnn 281 Query: 206 ggaatacgatcgagttgggagcctcgatggcaccgtctgttacctncacccctctctccg 265 || ||||| |||||||||||||| ||||| ||| | || |||| ||| |||||||| | Sbjct: 282 nnaacacgattgagttgggagcctcaatggcgccgccagtcacctccactcctctctctg 341 Query: 266 caggcaaacagtgcatcangaaggcttttggaccagccatctccatcagggcttcatcaa 325 |||||||||||||||| | | |||| | ||| ||||| |||||||||||||| ||||| | Sbjct: 342 caggcaaacagtgcataaggtaggcctgtgggccagcaatctccatcagggcctcatcca 401 Query: 326 ccatgaatccttggaatacttgtttcctatattcagcttcctccttttggcccatgctgg 385 || ||||||| ||||| ||||| ||||| |||||||| |||||||| ||||| |||| Sbjct: 402 ccgtgaatccctggaacttctgttttctataatcagcttcttccttttgtcccatactgg 461 Query: 386 cccaaacatntgtatacacaacatctgctcccttaactgcttccttgggatcatttgtta 445 ||||||||| ||| |||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 462 cccaaacatctgtgtacacaacgtctgctcccttaactgcttccctgggactgtttgtta 521 Query: 446 tttcaatcttact 458 ||||||||||||| Sbjct: 522 tttcaatcttact 534
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 198 bits (100), Expect = 1e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 324 aaccatgaatccttggaatacttgtttcctatattcagcttcctccttttggcccatgct 383 |||| ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 29099145 aaccgtgaatccttggaacactttttttctatattcagcttcctccttttggcccatgct 29099086 Query: 384 ggcccaaacatntgtatacacaacatctgctcccttaactgcttccttgggatcatttgt 443 |||||| |||| |||||||||||||||||||||||||||||||||| | || |||| ||| Sbjct: 29099085 ggcccagacatctgtatacacaacatctgctcccttaactgcttccatagggtcatctgt 29099026 Query: 444 tatttcaatcttactttcagcactcct 470 ||||||||||||||| |||||||||| Sbjct: 29099025 tatttcaatcttactaccagcactcct 29098999 Score = 176 bits (89), Expect = 4e-41 Identities = 147/167 (88%) Strand = Plus / Minus Query: 157 acgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctgggggaatacgatc 216 |||||||||||||| || || || ||||||||||||||||| ||||||||||||||||| Sbjct: 29099464 acgtgaagcatgatagcattctgggcgtgcattctgttctcagcctgggggaatacgatt 29099405 Query: 217 gagttgggagcctcgatggcaccgtctgttacctncacccctctctccgcaggcaaacag 276 ||||||||||| || ||||| ||||||||||||| | ||||||||| ||||||||||| Sbjct: 29099404 gagttgggagcttcaatggcgccgtctgttacctctatccctctctctgcaggcaaacaa 29099345 Query: 277 tgcatcangaaggcttttggaccagccatctccatcagggcttcatc 323 ||||| | |||||| ||||| |||||||||||||||| |||||||| Sbjct: 29099344 tgcataaggaaggcatttggcccagccatctccatcatagcttcatc 29099298
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 198 bits (100), Expect = 1e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 324 aaccatgaatccttggaatacttgtttcctatattcagcttcctccttttggcccatgct 383 |||| ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 145310 aaccgtgaatccttggaacactttttttctatattcagcttcctccttttggcccatgct 145251 Query: 384 ggcccaaacatntgtatacacaacatctgctcccttaactgcttccttgggatcatttgt 443 |||||| |||| |||||||||||||||||||||||||||||||||| | || |||| ||| Sbjct: 145250 ggcccagacatctgtatacacaacatctgctcccttaactgcttccatagggtcatctgt 145191 Query: 444 tatttcaatcttactttcagcactcct 470 ||||||||||||||| |||||||||| Sbjct: 145190 tatttcaatcttactaccagcactcct 145164 Score = 176 bits (89), Expect = 4e-41 Identities = 147/167 (88%) Strand = Plus / Minus Query: 157 acgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctgggggaatacgatc 216 |||||||||||||| || || || ||||||||||||||||| ||||||||||||||||| Sbjct: 145629 acgtgaagcatgatagcattctgggcgtgcattctgttctcagcctgggggaatacgatt 145570 Query: 217 gagttgggagcctcgatggcaccgtctgttacctncacccctctctccgcaggcaaacag 276 ||||||||||| || ||||| ||||||||||||| | ||||||||| ||||||||||| Sbjct: 145569 gagttgggagcttcaatggcgccgtctgttacctctatccctctctctgcaggcaaacaa 145510 Query: 277 tgcatcangaaggcttttggaccagccatctccatcagggcttcatc 323 ||||| | |||||| ||||| |||||||||||||||| |||||||| Sbjct: 145509 tgcataaggaaggcatttggcccagccatctccatcatagcttcatc 145463
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 151 bits (76), Expect = 2e-33 Identities = 152/178 (85%) Strand = Plus / Minus Query: 146 aagctccgagcacgtgaagcatgattgcgttttgcgcgtgcattctgttctctgcctggg 205 |||| |||||||||||||||||||| ||||| || ||||||||||| ||||| |||||| Sbjct: 9752 aagcaccgagcacgtgaagcatgatggcgttctgagcgtgcattctattctcaacctggg 9693 Query: 206 ggaatacgatcgagttgggagcctcgatggcaccgtctgttacctncacccctctctccg 265 |||| ||||| |||||||||||||| ||||| || || || |||| ||| |||||||| | Sbjct: 9692 ggaacacgattgagttgggagcctcaatggcgccatcagtcacctccactcctctctctg 9633 Query: 266 caggcaaacagtgcatcangaaggcttttggaccagccatctccatcagggcttcatc 323 || ||||||||||||| | | |||| | ||| ||||| ||||||||||||| |||||| Sbjct: 9632 caagcaaacagtgcataaggtaggcctatgggccagcaatctccatcagggtttcatc 9575 Score = 123 bits (62), Expect = 6e-25 Identities = 100/113 (88%) Strand = Plus / Minus Query: 346 tgtttcctatattcagcttcctccttttggcccatgctggcccaaacatntgtatacaca 405 ||||| ||||| ||| |||| |||||||| ||||| ||||||||||||| ||| |||||| Sbjct: 9262 tgttttctataatcaacttcttccttttgtcccatactggcccaaacatctgtgtacaca 9203 Query: 406 acatctgctcccttaactgcttccttgggatcatttgttatttcaatcttact 458 || ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 9202 acgtctgctcccttaactgcttccctgggactgtttgttatttcaatcttact 9150
>ref|NM_106187.2| Arabidopsis thaliana OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / aspartate carbamoyltransferase/ carboxyl- and carbamoyltransferase/ > AT1G75330 (OTC) mRNA, complete cds Length = 1350 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1040 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 981 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 980 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 921 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 920 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 861 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 860 tcattggtgatctctatcttactt 837
>gb|AY063030.1| Arabidopsis thaliana putative ornithine carbamoyltransferase precursor (At1g75330) mRNA, complete cds Length = 1159 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1016 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 957 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 956 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 897 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 896 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 837 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 836 tcattggtgatctctatcttactt 813
>gb|AF370270.1| Arabidopsis thaliana putative ornithine carbamoyltransferase precursor (At1g75330) mRNA, complete cds Length = 1319 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1040 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 981 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 980 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 921 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 920 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 861 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 860 tcattggtgatctctatcttactt 837
>emb|AJ000476.1|ATORNCARB Arabidopsis thaliana mRNA for ornithine carbamoyltransferase, complete CDS Length = 1327 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1030 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 971 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 970 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 911 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 910 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 851 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 850 tcattggtgatctctatcttactt 827
>emb|BX816578.1|CNS0AD7F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1254 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1031 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 972 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 971 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 912 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 911 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 852 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 851 tcattggtgatctctatcttactt 828
>emb|BX815560.1|CNS0ACYR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS71ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1015 cctctctctgcaggcaaacaatgcatgagataggctttttgacccgccaacttcatcaga 956 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 955 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 896 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 895 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 836 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 835 tcattggtgatctctatcttactt 812
>emb|BX816730.1|CNS0AAPB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZA01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1283 Score = 83.8 bits (42), Expect = 5e-13 Identities = 163/204 (79%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1029 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 970 Query: 316 gcttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttgg 375 |||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| Sbjct: 969 gcttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttga 910 Query: 376 cccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttggga 435 ||||| |||||||| || | || ||||||||||||||||| |||| ||||| || ||| Sbjct: 909 cccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttagga 850 Query: 436 tcatttgttatttcaatcttactt 459 ||||| || || || ||||||||| Sbjct: 849 tcattggtgatctctatcttactt 826
>emb|BX815325.1|CNS0ACXC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1264 Score = 81.8 bits (41), Expect = 2e-12 Identities = 162/203 (79%) Strand = Plus / Minus Query: 257 ctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcaggg 316 ||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| | Sbjct: 1025 ctctctctgcaggcaaacaatgcatgagataggctttttgacccgccaacttcatcagag 966 Query: 317 cttcatcaaccatgaatccttggaatacttgtttcctatattcagcttcctccttttggc 376 ||||||| ||| ||||||||||||| ||| | | ||| ||||| |||||||| | Sbjct: 965 cttcatccacctggaatccttggaatgctttccggcgagcttcggcttcatccttttgac 906 Query: 377 ccatgctggcccaaacatntgtatacacaacatctgctcccttaactgcttccttgggat 436 |||| |||||||| || | || ||||||||||||||||| |||| ||||| || |||| Sbjct: 905 ccatactggcccatacgtctgagtacacaacatctgctccaataacagcttctttaggat 846 Query: 437 catttgttatttcaatcttactt 459 |||| || || || ||||||||| Sbjct: 845 cattggtgatctctatcttactt 823
>gb|AF203387.1|AF203387 Canavalia lineata ornithine carbamoyltransferase OOCT2 (OOCT2) gene, complete cds Length = 6639 Score = 77.8 bits (39), Expect = 3e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 358 tcagcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccc 417 ||||| || |||||||||||||| ||||||||||||| ||||| |||| ||| ||||| Sbjct: 6053 tcagcctcttccttttggcccatactggcccaaacatccgtataaacaatatcagctcct 5994 Query: 418 ttaactgcttccttgggatcatttgttatttcaatctt 455 ||||| ||||| || |||||||| ||||| ||||||| Sbjct: 5993 ttaacagcttcttttggatcattagttatcacaatctt 5956
>gb|AF033561.1|AF033561 Canavalia lineata ornithine carbamoyltransferase (OCTase) mRNA, complete cds; nuclear gene for chloroplast product Length = 1433 Score = 77.8 bits (39), Expect = 3e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 358 tcagcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccc 417 ||||| || |||||||||||||| ||||||||||||| ||||| |||| ||| ||||| Sbjct: 901 tcagcctcttccttttggcccatactggcccaaacatccgtataaacaatatcagctcct 842 Query: 418 ttaactgcttccttgggatcatttgttatttcaatctt 455 ||||| ||||| || |||||||| ||||| ||||||| Sbjct: 841 ttaacagcttcttttggatcattagttatcacaatctt 804
>gb|U13684.1|PSU13684 Pisum sativum Wando ornithine carbamoyltransferase mRNA, complete cds Length = 1376 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/86 (86%) Strand = Plus / Minus Query: 354 atattcagcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgc 413 |||| ||||||| |||||||| |||||||||||||| |||| || |||||||||||| || Sbjct: 955 atatgcagcttcttccttttgccccatgctggcccagacatctgaatacacaacatcagc 896 Query: 414 tcccttaactgcttccttgggatcat 439 ||| |||| ||||| || ||||||| Sbjct: 895 tcctctaacagcttctttcggatcat 870
>emb|AJ002524.1|ATAJ2524 Arabidopsis thaliana gene encoding ornithine carbamoyltransferase Length = 2220 Score = 63.9 bits (32), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 361 gcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccctta 420 ||||| |||||||| ||||| |||||||| || | || ||||||||||||||||| || Sbjct: 1630 gcttcatccttttgacccatactggcccatacgtctgagtacacaacatctgctccaata 1571 Query: 421 actgcttccttgggatcatttgttatttcaatcttactt 459 || ||||| || |||||||| || || || ||||||||| Sbjct: 1570 acagcttctttaggatcattggtgatctctatcttactt 1532 Score = 50.1 bits (25), Expect = 0.007 Identities = 57/68 (83%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1831 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 1772 Query: 316 gcttcatc 323 |||||||| Sbjct: 1771 gcttcatc 1764
>emb|BX814609.1|CNS0ADLZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1255 Score = 63.9 bits (32), Expect = 4e-07 Identities = 73/87 (83%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 1034 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 975 Query: 316 gcttcatcaaccatgaatccttggaat 342 |||||||| ||| ||||||||||||| Sbjct: 974 gcttcatccacctggaatccttggaat 948 Score = 63.9 bits (32), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 361 gcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccctta 420 ||||| |||||||| ||||| |||||||| || | || ||||||||||||||||| || Sbjct: 929 gcttcatccttttgacccatactggcccatacgtctgagtacacaacatctgctccaata 870 Query: 421 actgcttccttgggatcatttgttatttcaatcttactt 459 || ||||| || |||||||| || || || ||||||||| Sbjct: 869 acagcttctttaggatcattggtgatctctatcttactt 831
>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence, complete sequence Length = 100685 Score = 63.9 bits (32), Expect = 4e-07 Identities = 82/99 (82%) Strand = Plus / Minus Query: 361 gcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccctta 420 ||||| |||||||| ||||| |||||||| || | || ||||||||||||||||| || Sbjct: 95038 gcttcatccttttgacccatactggcccatacgtctgagtacacaacatctgctccaata 94979 Query: 421 actgcttccttgggatcatttgttatttcaatcttactt 459 || ||||| || |||||||| || || || ||||||||| Sbjct: 94978 acagcttctttaggatcattggtgatctctatcttactt 94940 Score = 50.1 bits (25), Expect = 0.007 Identities = 57/68 (83%) Strand = Plus / Minus Query: 256 cctctctccgcaggcaaacagtgcatcangaaggcttttggaccagccatctccatcagg 315 |||||||| ||||||||||| ||||| | |||||||| |||| |||| || |||||| Sbjct: 95239 cctctctctgcaggcaaacaatgcatgaaataggctttttgacccgccaacttcatcaga 95180 Query: 316 gcttcatc 323 |||||||| Sbjct: 95179 gcttcatc 95172
>gb|AF203688.1|AF203688 Canavalia lineata ornithine carbamoyltransferase OOCT1 (OOCT1) gene, complete cds Length = 5665 Score = 60.0 bits (30), Expect = 7e-06 Identities = 80/97 (82%) Strand = Plus / Minus Query: 359 cagcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccct 418 ||||||| || ||||| ||||| || ||||| |||| || ||||||||| || || || | Sbjct: 4483 cagcttcttctttttgccccatactagcccagacatctgaatacacaacgtcagcccctt 4424 Query: 419 taactgcttccttgggatcatttgttatttcaatctt 455 |||| || || ||||||||||| ||||| |||||||| Sbjct: 4423 taacagcctctttgggatcattagttatctcaatctt 4387
>gb|AF033562.1|AF033562 Canavalia lineata ornithine carbamoyltransferase (OCTase) mRNA, complete cds; nuclear gene for chloroplast product Length = 1323 Score = 60.0 bits (30), Expect = 7e-06 Identities = 80/97 (82%) Strand = Plus / Minus Query: 359 cagcttcctccttttggcccatgctggcccaaacatntgtatacacaacatctgctccct 418 ||||||| || ||||| ||||| || ||||| |||| || ||||||||| || || || | Sbjct: 871 cagcttcttctttttgccccatactagcccagacatctgaatacacaacgtcagcccctt 812 Query: 419 taactgcttccttgggatcatttgttatttcaatctt 455 |||| || || ||||||||||| ||||| |||||||| Sbjct: 811 taacagcctctttgggatcattagttatctcaatctt 775
>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174974 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 188 ttctgttctctgcctgggggaata 211 |||||||||||||||||||||||| Sbjct: 79507 ttctgttctctgcctgggggaata 79484
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 361 gcttcctccttttggcccatgctggcccaaacat 394 ||||| |||| ||| ||||||||||||||||||| Sbjct: 1722846 gcttcttcctcttgccccatgctggcccaaacat 1722879
>dbj|AP001486.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-690D19, complete sequence Length = 169203 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 tccttgggatcatttgttattt 448 |||||||||||||||||||||| Sbjct: 30028 tccttgggatcatttgttattt 30007
>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete sequence Length = 195874 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 tccttgggatcatttgttattt 448 |||||||||||||||||||||| Sbjct: 150487 tccttgggatcatttgttattt 150466
>gb|U30252.3| Synechococcus sp. PCC 7942 cosmids 7H1 and 2E8, complete sequence Length = 60090 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 361 gcttcctccttttggcccatgctggcccaaacat 394 ||||| |||| ||| ||||||||||||||||||| Sbjct: 15139 gcttcttcctcttgccccatgctggcccaaacat 15172
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 361 gcttcctccttttggcccatgctggcccaaacat 394 ||||| |||| ||| ||||||||||||||||||| Sbjct: 2593938 gcttcttcctcttgccccatgctggcccaaacat 2593905
>gb|AF134726.1| Homo sapiens BAC clone 215O12 NG35, NG36, G9A, NG22, G9, HSP70-2, HSP70-1, HSP70-HOM, snRNP, G7A, NG37, NG23, and MutSH5 genes, complete cds Length = 180283 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 25316 ttcagcttcctccttttggcc 25296
>gb|AF109906.1|MMHC310M6 Mus musculus MHC class III region RD gene, partial cds; Bf, C2, G9A, NG22, G9, HSP70, HSP70, HSC70t, and smRNP genes, complete cds; G7A gene, partial cds; and unknown genes Length = 158405 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 52524 ttcagcttcctccttttggcc 52504
>ref|XM_591851.2| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 1 (LOC514062), mRNA Length = 3890 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 696 ttcagcttcctccttttggcc 676
>ref|XM_882445.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 7 (LOC514062), mRNA Length = 3941 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 693 ttcagcttcctccttttggcc 673
>ref|XM_882432.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 6 (LOC514062), mRNA Length = 3920 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 693 ttcagcttcctccttttggcc 673
>ref|XM_882425.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 5 (LOC514062), mRNA Length = 3869 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 693 ttcagcttcctccttttggcc 673
>ref|XM_882418.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 4 (LOC514062), mRNA Length = 3124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 693 ttcagcttcctccttttggcc 673
>ref|XM_869170.1| PREDICTED: Bos taurus similar to HLA-B associated transcript 8 isoform a, transcript variant 2 (LOC514062), mRNA Length = 3992 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 696 ttcagcttcctccttttggcc 676
>ref|XM_532084.2| PREDICTED: Canis familiaris similar to HLA-B associated transcript 8 isoform a (LOC474851), mRNA Length = 3639 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 850 ttcagcttcctccttttggcc 830
>emb|AL844853.23| Human DNA sequence from clone DAQB-331I12 on chromosome 6 Contains the NEU1 gene for sialidase 1 (lysosomal sialidase), the C6orf29 gene for chromosome 6 open reading frame 29, the BAT8 gene for HLA-B associated transcript 8, a novel transcript DAQB-331I12.5, the ZBTB12 gene (previously C6orf46) for zinc finger and BTB domain containing 12, the C2 gene for complement component 2, the Bf gene for B-factor, properdin, the RDBP gene for RD RNA binding protein, the SKIV2L gene for superkiller viralicidic activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3 homolog Z (C. elegans), the STK19 gene for serine/threonine kinase 19, the 5' end of the C4A gene for complement component 4A and 8 CpG isalnds, complete sequence Length = 153464 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 46835 ttcagcttcctccttttggcc 46855
>emb|X69838.1|HSG9A H.sapiens mRNA for G9a Length = 3391 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 112 ttcagcttcctccttttggcc 92
>emb|AL671762.10| Human DNA sequence from clone XXbac-254B15 on chromosome 6 contains the 5' end of the VARS2 gene for valyl-tRNA synthetase 2, the gene for chromosome 6 open reading frame 28, the HSPA1L gene for heat shock 70kDa protein 1-like, the HSPA1A gene for heat shock 70kDa protein 1A, the HSPA1B gene for heat shock 70kDa protein 1B, the gene for chromosome 6 open reading frame 48, the NEU1 gene for sialidase 1 (lysosomal sialidase), the gene forchromosome 6 open reading frame 29, the gene for HLA-B associated transcript 8, the gene for chromosome 6 open reading frame 46 and eight CpG islands, complete sequence Length = 113582 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 100558 ttcagcttcctccttttggcc 100578
>emb|AL662834.8| Human DNA sequence from clone XXbac-40G17 on chromosome 6 contains the MSH5 gene for mutS homolog 5 (e. coli), the gene for NG23 protein, the gene for chromosome 6 open reading frame 27, the VARS2 gene for valyl-tRNA synthetase 2, the gene for chromosome 6 open reading frame 28, the HSPA1L gene for heat shock 70kDa protein 1-like, the HSPA1A gene for heat shock 70kDa protein 1A, the HSPA1B gene for heat shock 70kDa protein 1B, the gene for chromosome 6 open reading frame 48, the NEU1 gene for sialidase 1 (lysosomal sialidase), the gene for chromosome 6 open reading frame 29, the BAT8 gene for HLA-B associated transcript 8, the gene for chromosome 6 open reading frame 46 and nine CpG islands, complete sequence Length = 179894 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 156769 ttcagcttcctccttttggcc 156789
>ref|NM_145830.1| Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant long, mRNA Length = 4026 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 851 ttcagcttcctccttttggcc 831
>ref|NM_147151.1| Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant short, mRNA Length = 3757 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 680 ttcagcttcctccttttggcc 660
>ref|XM_776481.1| PREDICTED: Strongylocentrotus purpuratus similar to Importin beta-1 subunit (Karyopherin beta-1 subunit) (Nuclear factor P97) (Pore targeting complex 97 kDa subunit) (PTAC97) (SCG) (LOC576144), mRNA Length = 2505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 ccatctccatcagggcttcat 322 ||||||||||||||||||||| Sbjct: 1549 ccatctccatcagggcttcat 1529
>gb|BC058357.1| Mus musculus euchromatic histone lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:6822432), partial cds Length = 3905 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 685 ttcagcttcctccttttggcc 665
>emb|AJ315532.1|HSA315532 Homo sapiens mRNA for NG36/G9a protein Length = 3633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 692 ttcagcttcctccttttggcc 672
>emb|CR936237.6| Human DNA sequence from clone DAAP-66K18 on chromosome 6, complete sequence Length = 40906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 35828 ttcagcttcctccttttggcc 35848
>emb|CR788238.10| Human DNA sequence from clone DAMC-45E14 on chromosome 6, complete sequence Length = 108340 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 79063 ttcagcttcctccttttggcc 79043
>emb|CR759784.6| Human DNA sequence from clone DAMC-303C24 on chromosome 6, complete sequence Length = 63128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 51645 ttcagcttcctccttttggcc 51665
>emb|CR388219.12| Human DNA sequence from clone DADB-122G4 on chromosome 6, complete sequence Length = 71590 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 7426 ttcagcttcctccttttggcc 7446
>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete Sequence, complete sequence Length = 221899 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 11823 ttcagcttcctccttttggcc 11803
>gb|AC022733.8| Homo sapiens chromosome 8, clone RP11-470M17, complete sequence Length = 175202 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 gtttcctatattcagcttcctcctt 371 ||||||||||||||||| ||||||| Sbjct: 62743 gtttcctatattcagctgcctcctt 62719
>ref|XM_694756.1| PREDICTED: Danio rerio similar to HLA-B associated transcript 8 isoform a (LOC571190), mRNA Length = 3087 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 731 ttcagcttcctccttttggcc 711
>dbj|AK154246.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630011O04 product:HLA-B associated transcript 8, full insert sequence Length = 3938 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 874 ttcagcttcctccttttggcc 854
>gb|BC020970.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:3912870), partial cds Length = 3957 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 657 ttcagcttcctccttttggcc 637
>gb|BC018718.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone MGC:31802 IMAGE:4123580), complete cds Length = 3963 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 680 ttcagcttcctccttttggcc 660
>gb|BC002686.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:3607648), partial cds Length = 3484 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 192 ttcagcttcctccttttggcc 172
>gb|BC009351.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 2, mRNA (cDNA clone IMAGE:4138717), partial cds Length = 3972 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 689 ttcagcttcctccttttggcc 669
>ref|NM_025256.4| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a-SPI, mRNA Length = 3892 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 702 ttcagcttcctccttttggcc 682
>ref|NM_006709.2| Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a, mRNA Length = 3994 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 702 ttcagcttcctccttttggcc 682
>gb|AC148692.1| Macaca mulatta Major Histocompatibility Complex BAC MMU235E11, complete sequence Length = 159875 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 17627 ttcagcttcctccttttggcc 17647
>gb|AC148662.1| Macaca mulatta Major Histocompatibility Complex BAC MMU009PO6, complete sequence Length = 191271 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 148012 ttcagcttcctccttttggcc 148032
>gb|BC030348.1| Mus musculus, clone IMAGE:5006779, mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 251 ttcagcttcctccttttggcc 271
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 51122 ttcagcttcctccttttggcc 51102
>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete sequence Length = 171682 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 131234 ttcagcttcctccttttggcc 131214
>dbj|AB209433.1| Homo sapiens mRNA for HLA-B associated transcript 8 BAT8 isoform a variant protein Length = 4009 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 784 ttcagcttcctccttttggcc 764
>dbj|AB077210.1| Mus musculus mRNA for G9a long, complete cds Length = 4026 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 851 ttcagcttcctccttttggcc 831
>dbj|AB077209.1| Mus musculus mRNA for G9a short, complete cds Length = 3757 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 680 ttcagcttcctccttttggcc 660
>emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete sequence Length = 137286 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 ttcagcttcctccttttggcc 377 ||||||||||||||||||||| Sbjct: 70425 ttcagcttcctccttttggcc 70405
>ref|XM_633624.1| Dictyostelium discoideum hypothetical protein (DDB0185808), partial mRNA Length = 372 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 435 atcatttgttatttcaatcttact 458 |||| ||||||||||||||||||| Sbjct: 216 atcaattgttatttcaatcttact 193
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 tccatcagggcttcatcaac 326 |||||||||||||||||||| Sbjct: 2175714 tccatcagggcttcatcaac 2175733
>gb|AC104481.3| Sus scrofa clone RP44-361I24, complete sequence Length = 86524 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 ccttaactgcttccttggga 435 |||||||||||||||||||| Sbjct: 59019 ccttaactgcttccttggga 59038
>gb|BC040665.1| Homo sapiens cDNA clone MGC:42208 IMAGE:4811654, complete cds Length = 5375 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tttggaccagccatctccat 311 |||||||||||||||||||| Sbjct: 1469 tttggaccagccatctccat 1488
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence Length = 161536 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 ttttgcgcgtgcattctgttctct 198 |||||||| ||||||||||||||| Sbjct: 143421 ttttgcgcttgcattctgttctct 143398
>gb|AC149268.21| Medicago truncatula clone mth2-94j16, complete sequence Length = 146810 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ttttgcgcgtgcattctgttctct 198 |||||||| ||||||||||||||| Sbjct: 140554 ttttgcgcttgcattctgttctct 140577
>emb|AL512638.5| Human DNA sequence from clone RP4-663N10 on chromosome 1 Contains the 5' end of the NGFB gene for nerve growth factor (beta polypeptide), the 3' end of a novel gene, a renin (REN) pseudogene and one CpG island, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gccatctccatcagggcttcatca 324 ||||||||||||| |||||||||| Sbjct: 54335 gccatctccatcatggcttcatca 54312
>gb|AC158952.4| Mus musculus chromosome 8, clone RP23-265B15, complete sequence Length = 192398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctgttctctgcctggggga 208 |||||||||||||||||||| Sbjct: 172564 tctgttctctgcctggggga 172545
>emb|AL096761.1|HS754E20A Human DNA sequence from clone RP4-754E20 on chromosome 22q13.2, complete sequence Length = 65201 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cagccatctccatcagggct 318 |||||||||||||||||||| Sbjct: 30216 cagccatctccatcagggct 30235
>emb|X97768.1|CPARCABDC C.perfringens strain 13 arcABDC, ahrC and colA genes Length = 5447 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 aacatctgctcccttaactgcttc 428 ||||||||| |||||||||||||| Sbjct: 1042 aacatctgcacccttaactgcttc 1019
>emb|BX572634.7| Zebrafish DNA sequence from clone DKEY-6H1 in linkage group 11, complete sequence Length = 202461 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tcatttgttatttcaatctt 455 |||||||||||||||||||| Sbjct: 90407 tcatttgttatttcaatctt 90388
>gb|AC084834.4| Homo sapiens chromosome 8, clone RP11-107M13, complete sequence Length = 153304 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ctgcttccttgggatcattt 441 |||||||||||||||||||| Sbjct: 87396 ctgcttccttgggatcattt 87377
>gb|AC019089.6| Homo sapiens BAC clone RP11-370L14 from 4, complete sequence Length = 177160 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 tcatttgttatttcaatctt 455 |||||||||||||||||||| Sbjct: 171900 tcatttgttatttcaatctt 171881
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 30 ttcacggaaaccctgcaaggcttacagt 57 ||||||||||||||| ||| |||||||| Sbjct: 18140914 ttcacggaaaccctggaagacttacagt 18140887
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 aacatctgctcccttaactgcttc 428 ||||||||| |||||||||||||| Sbjct: 218519 aacatctgcacccttaactgcttc 218496
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 30 ttcacggaaaccctgcaaggcttacagt 57 ||||||||||||||| ||| |||||||| Sbjct: 21286 ttcacggaaaccctggaagacttacagt 21259
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 30 ttcacggaaaccctgcaaggcttacagt 57 ||||||||||||||| ||| |||||||| Sbjct: 136564 ttcacggaaaccctggaagacttacagt 136537
>gb|AC120001.13| Mus musculus chromosome 8, clone RP24-143B14, complete sequence Length = 184586 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tctgttctctgcctggggga 208 |||||||||||||||||||| Sbjct: 143566 tctgttctctgcctggggga 143547
>dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-111M22, complete sequences Length = 173379 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 tttggaccagccatctccat 311 |||||||||||||||||||| Sbjct: 119859 tttggaccagccatctccat 119878
>emb|AL806514.8| Mouse DNA sequence from clone RP23-18D24 on chromosome 2, complete sequence Length = 206358 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tggcccatgctggcccaaac 392 |||||||||||||||||||| Sbjct: 142917 tggcccatgctggcccaaac 142898
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tgctcccttaactgcttcct 430 |||||||||||||||||||| Sbjct: 88357 tgctcccttaactgcttcct 88338 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,479,866 Number of Sequences: 3902068 Number of extensions: 3479866 Number of successful extensions: 61881 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61664 Number of HSP's gapped (non-prelim): 215 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)