ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61e22 |
|---|---|
| Clone Library Name | barley_pub |
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 55.5 bits (132), Expect = 4e-08 Identities = 23/26 (88%), Positives = 26/26 (100%) Frame = -2 Query: 229 VGPFQNLLDHLSDPVNNNILTSLKFH 152 VGP+QNLLDHL+DPVNNN+LTSLKFH Sbjct: 248 VGPYQNLLDHLADPVNNNVLTSLKFH 273
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 35.8 bits (81), Expect = 0.031 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHLSDPVNNN Sbjct: 240 GPLENLADHLSDPVNNN 256
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 233 GPLENLADHLADPVNNN 249
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 250 GPIENLADHLADPVNNN 266
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 250 GPIENLADHLADPVNNN 266
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 237 GPLENLADHLADPVNNN 253
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 88 GPLENLADHLADPVNNN 104
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP NL+DHL+DPVNNN Sbjct: 239 GPLDNLVDHLADPVNNN 255
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPLENLADHLADPVNNN 255
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 228 GPLENLADHLADPVNNN 244
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 178 GPLENLADHLADPVNNN 194
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPIENLADHLADPVNNN 255
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 200 GPLENLADHLADPVNNN 216
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 239 GPIENLADHLADPVNNN 255
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 246 GPIENLADHLADPVNNN 262
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 238 GPLENLADHLADPVNNN 254
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 238 GPLENLADHLADPVNNN 254
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 238 GPLENLADHLADPVNNN 254
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 238 GPLENLADHLADPVNNN 254
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 238 GPLENLADHLADPVNNN 254
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 227 GPLENLADHLADPVNNN 243
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 236 GPIENLADHLTDPVNNN 252
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 236 GPLENLADHLADPVNNN 252
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 241 GPLENLADHLADPVNNN 257
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 236 GPLENLADHLADPVNNN 252
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 34.7 bits (78), Expect = 0.068 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPVNNN Sbjct: 96 GPLENLADHLADPVNNN 112
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 33.9 bits (76), Expect = 0.12 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPVNNN Sbjct: 237 GPLENLADHIADPVNNN 253
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 33.9 bits (76), Expect = 0.12 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPVNNN Sbjct: 239 GPLENLADHIADPVNNN 255
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 33.9 bits (76), Expect = 0.12 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPVNNN Sbjct: 239 GPLENLADHIADPVNNN 255
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 33.9 bits (76), Expect = 0.12 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPVNNN Sbjct: 234 GPLENLADHIADPVNNN 250
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 33.5 bits (75), Expect = 0.15 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL DPVNNN Sbjct: 239 GPLENLADHLVDPVNNN 255
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 33.1 bits (74), Expect = 0.20 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL++PVNNN Sbjct: 217 GPLENLADHLAEPVNNN 233
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 32.7 bits (73), Expect = 0.26 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNNIL 170 GPF+NLL HLSDP +N I+ Sbjct: 229 GPFENLLQHLSDPWHNTIV 247
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 32.7 bits (73), Expect = 0.26 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNNILT 167 GP +NL HLSDP NN+LT Sbjct: 249 GPVENLAKHLSDPFGNNLLT 268
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.44 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPV NN Sbjct: 237 GPIENLFDHLADPVANN 253
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.44 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP ++L DH++DPVNNN Sbjct: 238 GPLEDLADHIADPVNNN 254
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.0 bits (71), Expect = 0.44 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+ PVNNN Sbjct: 235 GPLENLADHLAGPVNNN 251
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 31.6 bits (70), Expect = 0.58 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP QNL DH++DPV NN Sbjct: 237 GPIQNLYDHVADPVANN 253
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 31.6 bits (70), Expect = 0.58 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL DPV NN Sbjct: 240 GPLENLFDHLDDPVANN 256
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 31.6 bits (70), Expect = 0.58 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPV NN Sbjct: 122 GPIENLYDHLADPVANN 138
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 31.6 bits (70), Expect = 0.58 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPV NN Sbjct: 238 GPIENLYDHLADPVANN 254
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 31.2 bits (69), Expect = 0.75 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NLLDHL +PV NN Sbjct: 237 GPLENLLDHLDNPVANN 253
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.99 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 237 GPIENLFDHVADPVANN 253
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 30.8 bits (68), Expect = 0.99 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP QNL DHL+DP NN Sbjct: 228 GPIQNLADHLADPGTNN 244
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 30.8 bits (68), Expect = 0.99 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 236 GPIENLADHIADPVANN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 30.8 bits (68), Expect = 0.99 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DPV NN Sbjct: 240 GPLENLNDHLADPVANN 256
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.8 bits (68), Expect = 0.99 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 235 GPIENLFDHVADPVANN 251
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 237 GPIENLYDHVADPVANN 253
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 209 GPIENLSDHIADPVANN 225
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.3 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DH++DPV NN Sbjct: 237 GPIENLSDHINDPVANN 253
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Frame = -2 Query: 226 GPFQNLLDHLSDP-VNNNILTSLKF 155 GP QNL DHL+DP VN ++ KF Sbjct: 225 GPVQNLTDHLADPTVNKAFASATKF 249
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL+DP NN Sbjct: 237 GPIENLSDHLADPAVNN 253
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 28.9 bits (63), Expect = 3.7 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNNI 173 GP +NL HL+DP +NNI Sbjct: 217 GPLENLATHLADPWHNNI 234
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 28.9 bits (63), Expect = 3.7 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -2 Query: 226 GPFQNLLDHLSDPVNNN 176 GP +NL DHL++P NN Sbjct: 246 GPIENLTDHLANPAENN 262
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 27.7 bits (60), Expect = 8.3 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Frame = -2 Query: 226 GPFQNLLDHLSDP-VNNNILTSLKF 155 GP QNL DHL++P VNN + KF Sbjct: 225 GPVQNLDDHLANPTVNNAFAFATKF 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,212,658 Number of Sequences: 219361 Number of extensions: 449971 Number of successful extensions: 1148 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 1139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1148 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
