ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah61e20 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 145 bits (366), Expect = 8e-35 Identities = 69/74 (93%), Positives = 73/74 (98%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 IFGHS+GSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVR+ Sbjct: 169 IFGHSTGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRI 228 Query: 319 LIIMLKNAGDKSED 278 L+IMLKNA DKSE+ Sbjct: 229 LVIMLKNASDKSEE 242
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 117 bits (294), Expect = 2e-26 Identities = 56/73 (76%), Positives = 64/73 (87%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 IFG S+ F FE+YFGLLIF+GYMV DTQEIIE+AH GDMDY+KH+LTLFTDFVAV VR+ Sbjct: 168 IFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRI 227 Query: 319 LIIMLKNAGDKSE 281 LIIMLKN+ DK E Sbjct: 228 LIIMLKNSADKEE 240
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 68.9 bits (167), Expect = 9e-12 Identities = 30/74 (40%), Positives = 48/74 (64%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F S F +Y GL++ G++++DTQ IIE+A HGD DYI H + LF DF+ V ++ Sbjct: 162 VFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKL 221 Query: 319 LIIMLKNAGDKSED 278 ++I+ N DK ++ Sbjct: 222 MMILAMNEKDKKKE 235
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 68.6 bits (166), Expect = 1e-11 Identities = 31/74 (41%), Positives = 48/74 (64%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F S F +Y GLL+ G++++DTQ IIE+A HGD DYI H + LF DFV + ++ Sbjct: 162 LFFGSIWLFQANLYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKL 221 Query: 319 LIIMLKNAGDKSED 278 ++I+ N DK ++ Sbjct: 222 MLILAFNEKDKKKE 235
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 68.2 bits (165), Expect = 2e-11 Identities = 31/74 (41%), Positives = 48/74 (64%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F S F +Y GLL+ G++++DTQ IIE+A HGD DYI H + LF DFV + ++ Sbjct: 162 LFFGSIWLFQANLYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKL 221 Query: 319 LIIMLKNAGDKSED 278 ++I+ N DK ++ Sbjct: 222 MLILAFNEKDKKKE 235
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 67.8 bits (164), Expect = 2e-11 Identities = 29/74 (39%), Positives = 48/74 (64%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F S F +Y GL++ G++++DTQ IIE+A HGD DYI H + LF DF+ + ++ Sbjct: 162 VFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKL 221 Query: 319 LIIMLKNAGDKSED 278 ++I+ N DK ++ Sbjct: 222 MMILAMNEKDKKKE 235
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 65.1 bits (157), Expect = 1e-10 Identities = 29/74 (39%), Positives = 49/74 (66%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F S F +Y GL++ G++++DTQ IIE+A +GD DYI H + LF+DFV + ++ Sbjct: 162 LFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKL 221 Query: 319 LIIMLKNAGDKSED 278 ++I+ N DK ++ Sbjct: 222 MMILAMNEKDKKKE 235
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 64.3 bits (155), Expect = 2e-10 Identities = 27/66 (40%), Positives = 45/66 (68%) Frame = -2 Query: 475 FMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNA 296 F +Y GLLI G+++ DTQ IIE+A +GD DY+ H++ LF DF+ + ++++I+ N Sbjct: 170 FKAHMYLGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVILALND 229 Query: 295 GDKSED 278 DK ++ Sbjct: 230 KDKKKE 235
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 54.3 bits (129), Expect = 2e-07 Identities = 22/63 (34%), Positives = 41/63 (65%) Frame = -2 Query: 466 EVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIMLKNAGDK 287 ++Y G+ + ++VYDTQ I+E+ +G+ D ++HAL LF D +++ R+LII+ + K Sbjct: 176 QLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERK 235 Query: 286 SED 278 + Sbjct: 236 QNE 238
>TMBI1_HUMAN (Q969X1) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein homolog) Length = 311 Score = 33.9 bits (76), Expect = 0.32 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -2 Query: 472 MFEVYFGLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLVRVLIIM 308 M G + F ++ YDTQ ++ H DYI AL ++TD + + VL +M Sbjct: 251 MLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 32.7 bits (73), Expect = 0.71 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHH--GDMDYIKHALTLFTDFVAVLV 326 IF + M G + F ++ YDTQ ++ H DYI AL ++TD V + Sbjct: 240 IFKYIYWLHMVYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIVYIFT 299 Query: 325 RVL 317 VL Sbjct: 300 FVL 302
>TMBI4_MOUSE (Q9DA39) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) Length = 238 Score = 32.7 bits (73), Expect = 0.71 Identities = 15/61 (24%), Positives = 33/61 (54%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRV 320 +F +S + G L+F G+++YDT ++ R +Y+ A++L+ D + + + + Sbjct: 171 LFFYSETMELVLASLGALLFCGFIIYDTHSLMHRL--SPEEYVIAAISLYMDIINLFLHL 228 Query: 319 L 317 L Sbjct: 229 L 229
>SYC1_STRCO (Q9L0Q6) Cysteinyl-tRNA synthetase 1 (EC 6.1.1.16) (Cysteine--tRNA| ligase 1) (CysRS 1) Length = 613 Score = 32.0 bits (71), Expect = 1.2 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -1 Query: 398 GAPRRHGLHQARPHPLHRLCCRPRPSPHHH 309 G PRR + + PHP PRP P HH Sbjct: 6 GTPRRPAVRGSAPHPARGSAPGPRPMPTHH 35
>YBHL_ECOLI (P0AAC4) Inner membrane protein ybhL| Length = 234 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = -2 Query: 496 FGHSSGSFMFEV-YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTD 344 F S + M+ V Y G+++F+G YDTQ++ D I ALTL+ D Sbjct: 159 FWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD 218 Query: 343 FVAVLVRVLII 311 F+ + + +L I Sbjct: 219 FINLFLMLLRI 229
>YBHL_ECOL6 (P0AAC5) Inner membrane protein ybhL| Length = 234 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = -2 Query: 496 FGHSSGSFMFEV-YFGLLIFLGYMVYDTQEIIERAHHGDMD--------YIKHALTLFTD 344 F S + M+ V Y G+++F+G YDTQ++ D I ALTL+ D Sbjct: 159 FWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD 218 Query: 343 FVAVLVRVLII 311 F+ + + +L I Sbjct: 219 FINLFLMLLRI 229
>TMBI4_HUMAN (Q9HC24) Transmembrane BAX inhibitor motif-containing protein 4| (Z-protein) (S1R protein) Length = 238 Score = 31.6 bits (70), Expect = 1.6 Identities = 12/46 (26%), Positives = 28/46 (60%) Frame = -2 Query: 454 GLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVL 317 G L+F G+++YDT ++ + +Y+ A++L+ D + + + +L Sbjct: 186 GALLFCGFIIYDTHSLMHKL--SPEEYVLAAISLYLDIINLFLHLL 229
>YN45_YEAST (P48558) Hypothetical 33.6 kDa protein in MCK1-RPS19B intergenic| region Length = 297 Score = 31.6 bits (70), Expect = 1.6 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%) Frame = -2 Query: 499 IFGHSSGSFMFEVYFGLL---IFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVL 329 +FG ++ S F + +G L +F Y+ DTQ I + + + ++ A+ L+ D V + Sbjct: 226 LFGWNTHSSKFNLLYGWLGAILFTAYLFIDTQLIFRKVYPD--EEVRCAMMLYLDIVNLF 283 Query: 328 VRVLIIMLKNAGD 290 + +L I+ + D Sbjct: 284 LSILRILANSNDD 296
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 31.2 bits (69), Expect = 2.1 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = -1 Query: 419 HAGDHREGAPRRHGLHQARPHPLHRLCCRPRPSPHHH 309 H G H AP H H PH H P HHH Sbjct: 165 HLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 201 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 431 HGVRHAGDHREGAPRRHGLHQARPHPLHRLCCRPRPSPHHH 309 H H H AP H H PH H P HHH Sbjct: 181 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 221 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/41 (34%), Positives = 14/41 (34%) Frame = -1 Query: 431 HGVRHAGDHREGAPRRHGLHQARPHPLHRLCCRPRPSPHHH 309 H H H AP H H PH H P HHH Sbjct: 171 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHH 211 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 3/44 (6%) Frame = -1 Query: 431 HGVRHAGDHREGAPRRHGLHQARPHPL---HRLCCRPRPSPHHH 309 H HA H H H A HP H L +PHHH Sbjct: 134 HHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHHH 177
>CEMA_CHAGL (Q8M9X3) Chloroplast envelope membrane protein| Length = 472 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/45 (33%), Positives = 28/45 (62%) Frame = -2 Query: 439 LGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRVLIIML 305 LG +++ Q I+ A + + D I L LFTDF+A+ +++++L Sbjct: 327 LGALIH--QRTIQLAEYYNQDSINIILHLFTDFIAIFTLIVLLIL 369
>YQHQ_BACSU (P54515) Hypothetical protein yqhQ| Length = 318 Score = 30.4 bits (67), Expect = 3.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = -2 Query: 544 VWPVDPALAAVLPRPIFGHSSGSFMFEVYFGLLIFLGYMVY 422 V+ + P A L RPIF ++ E F L++ LGY+ + Sbjct: 124 VFTLVPVFLAELTRPIFSLNTAQIAIESLFKLILLLGYIYF 164
>CITE2_HUMAN (Q99967) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) (P35srj) Length = 270 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 383 HGLHQARPHPLHRLCCRPRPSPHHH 309 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein| 1) (MRG-1) Length = 269 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -1 Query: 383 HGLHQARPHPLHRLCCRPRPSPHHH 309 +GLH HP HR+ PSPHHH Sbjct: 18 NGLHH---HPAHRMGMGQFPSPHHH 39
>GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP)| Length = 1317 Score = 29.6 bits (65), Expect = 6.0 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 83 SFISSSKLTQGSHEHKLTRMARRQVTAPA 169 + +SSK + GS EHK +RM R + + PA Sbjct: 281 ALFNSSKTSDGSGEHKKSRMKRSRTSLPA 309
>Y819_CHLTR (O84826) Hypothetical protein CT_819| Length = 238 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = -2 Query: 475 FMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 374 ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 169 YLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206
>Y206_CHLMU (Q9PLA1) Hypothetical protein TC0206| Length = 238 Score = 29.6 bits (65), Expect = 6.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = -2 Query: 475 FMFEVYFGLLIFLGYMVYDTQEIIERAH----HGDMDY 374 ++ Y GL+IF+G V D Q I A HGD+ Y Sbjct: 169 YLLICYLGLIIFVGLTVVDAQSIRRVARSVGDHGDLSY 206
>BAT5_MOUSE (Q9Z1Q2) Protein BAT5 (HLA-B-associated transcript 5)| Length = 557 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = -1 Query: 455 WPVDLPGVHGVRHAGDHREGAPRRHGLHQARPHPLHR 345 WPVD G G P R G+ RP PLHR Sbjct: 155 WPVDFHWEEPSSRKGSR--GGPSRRGVALLRPEPLHR 189
>TYPH_MYCGE (P47297) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 421 Score = 29.3 bits (64), Expect = 7.9 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Frame = -2 Query: 517 AVLPRPIFGHSSGSFMFEVYF-----GLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTL 353 AVL + I + +F+ ++F L L + DT EII+ HHG + KH+ Sbjct: 27 AVLNKTIADYQITAFLMAIWFKGMNPNELFLLTKAMVDTGEIIKFNHHGKISVDKHSTGG 86 Query: 352 FTDFVAV-LVRVL 317 D V++ LV +L Sbjct: 87 IGDKVSLALVPIL 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,031,935 Number of Sequences: 219361 Number of extensions: 1056471 Number of successful extensions: 3311 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 3148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3303 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
