Clone Name | rbah61e19 |
---|---|
Clone Library Name | barley_pub |
>I11RA_PONPY (Q5RF19) Interleukin-11 receptor alpha chain precursor| (IL-11R-alpha) (IL-11RA) Length = 422 Score = 30.8 bits (68), Expect = 2.4 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Frame = -3 Query: 426 RVLTHLPRALLQAAEMARGSADAWDVPCPRHPTAPRRCTV-AIVFAEQHRLVAPTVKQIK 250 R LT + + A+ R S PCP+ P RC V F Q+R+ V + Sbjct: 143 RYLTSYRKKTVLGADSQRRSPSTGPWPCPQDPLGAARCVVHGAEFWSQYRINVTEVNPLG 202 Query: 249 GTVRRLSHDRASAHRNTP 196 + R L S R P Sbjct: 203 ASTRLLDVSLQSILRPDP 220
>I11RA_HUMAN (Q14626) Interleukin-11 receptor alpha chain precursor| (IL-11R-alpha) (IL-11RA) Length = 422 Score = 30.8 bits (68), Expect = 2.4 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Frame = -3 Query: 426 RVLTHLPRALLQAAEMARGSADAWDVPCPRHPTAPRRCTV-AIVFAEQHRLVAPTVKQIK 250 R LT + + A+ R S PCP+ P RC V F Q+R+ V + Sbjct: 143 RYLTSYRKKTVLGADSQRRSPSTGPWPCPQDPLGAARCVVHGAEFWSQYRINVTEVNPLG 202 Query: 249 GTVRRLSHDRASAHRNTP 196 + R L S R P Sbjct: 203 ASTRLLDVSLQSILRPDP 220
>YNV5_CAEEL (P34568) Hypothetical protein T16H12.5| Length = 451 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/55 (36%), Positives = 28/55 (50%) Frame = +3 Query: 123 QLVNWWVGSGIQDFSSHGAGRARSPVCYGVQRPCHGRAGGPSP*SASPWEPLIDV 287 +LV+ VG G + S G+G + HGR+ PSP SAS +PL+ V Sbjct: 39 RLVSMEVGMGNDEVVSSGSGNS-----------AHGRSISPSPSSASHGDPLLPV 82
>HEM0_OPSTA (P43090) 5-aminolevulinate synthase, erythroid-specific,| mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E) Length = 582 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Frame = -3 Query: 333 PTAPRRCTVAIVFAEQHRLVAPTVKQIKGTVRR---LSHDRASAHRNTPGSERDLHHEMR 163 PT P+R ++++ +Q RL A T Q+ +V + + R +P + D+ +++ Sbjct: 56 PTQPKRQRLSLL--DQKRLFAQTATQVAVSVSKGCPFVSSQIGMVRASPEVQEDVQADLK 113 Query: 162 NPVCRSPP 139 +PV +PP Sbjct: 114 SPVLPTPP 121
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +1 Query: 286 LFRENDGNGAPSWGRRMTRT--RNIPSIGRTTSHFS 387 L+ + +GN +PS GR + R+ RNI G TT+ S Sbjct: 2013 LYSDGEGNPSPSQGRTLPRSGPRNIRVFGETTNSLS 2048
>ATM_DEBHA (Q6BV76) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2948 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 363 DAWDVPCPRHPTAPRRCTVAIVFAEQHRLVAPTVKQI 253 + WD+PCPR E+H+L+ T+KQI Sbjct: 2034 NCWDIPCPREAN------------EEHQLIYKTLKQI 2058
>GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precursor| (G-protein coupled receptor CNS1) Length = 603 Score = 29.3 bits (64), Expect = 7.0 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -3 Query: 471 RARGDGGQTRAAFRRRVLTHLPRALLQAAEMARGSADAWDVPCPR 337 R D G R + R + H+PR L+A RG A +WD+P PR Sbjct: 50 RRSRDAGGPRNSARDALRVHVPREKLEAE--VRG-ATSWDLPPPR 91
>FLVC1_MUSDU (Q9ES43) Feline leukemia virus subgroup C receptor-related protein| 1 Length = 560 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 8/47 (17%) Frame = -3 Query: 408 PRALLQAAEMARG----SADAWDVPCPRHP----TAPRRCTVAIVFA 292 P+AL+ A E + + D DVPCP P +PRR V ++F+ Sbjct: 62 PQALIAAEEETQARLLPAGDGEDVPCPACPPRTALSPRRFVVLLIFS 108
>I11RB_MOUSE (P70225) Interleukin-11 receptor alpha-2 chain precursor| (IL-11R-alpha-2) (Interleukin-11 receptor beta chain) (IL-11R-beta) Length = 432 Score = 29.3 bits (64), Expect = 7.0 Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 11/101 (10%) Frame = -3 Query: 426 RVLTHLPRALLQAAEMARGSADAWDVPCPRHPTAPRRCTV-AIVFAEQHRLVAPTVKQIK 250 R LT + L AE R S PCP+ P RC V F ++R+ V + Sbjct: 143 RYLTSYRKKTLPGAESQRESPSTGPWPCPQDPLEASRCVVHGAEFWSEYRINVTEVNSLG 202 Query: 249 GTVRRLSHDRASAHR----------NTPGSERDLHHEMRNP 157 + L S R + PG R LH P Sbjct: 203 ASTCLLDVRLQSILRPDPPQGLRVESVPGYPRRLHASWTYP 243
>I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor| (IL-11R-alpha) (IL-11RA) Length = 431 Score = 29.3 bits (64), Expect = 7.0 Identities = 28/101 (27%), Positives = 36/101 (35%), Gaps = 11/101 (10%) Frame = -3 Query: 426 RVLTHLPRALLQAAEMARGSADAWDVPCPRHPTAPRRCTV-AIVFAEQHRLVAPTVKQIK 250 R LT + L AE R S PCP+ P RC V F ++R+ V + Sbjct: 143 RYLTSYRKKTLPGAESQRESPSTGPWPCPQDPLEASRCVVHGAEFWSEYRINVTEVNPLG 202 Query: 249 GTV--------RRLSHDRASAHR--NTPGSERDLHHEMRNP 157 + R L D R + PG R LH P Sbjct: 203 ASTCLLDVRLQRILRPDPPQGLRVESVPGYPRRLHASWTYP 243
>POP1_YEAST (P41812) Ribonucleases P/MRP protein subunit POP1 (EC 3.1.26.5)| (RNases P/MRP 100.4 kDa subunit) (RNA-processing protein POP1) Length = 875 Score = 29.3 bits (64), Expect = 7.0 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -3 Query: 336 HPTAPRRCTVAIVFAEQHRLVAPTVKQIKGTVRRL--SHDRASAHRNTPGSE-RDLHHEM 166 H P+RCT A + L AP K++ + R+ S D S H N P E + +E+ Sbjct: 437 HNALPQRCTFAFEAIDPRHLAAP--KKLNDSQRKTVNSDDILSLHENYPQDEINAVFNEL 494 Query: 165 RNPVCRS 145 +P R+ Sbjct: 495 CDPESRT 501
>ORN_NOCFA (Q5Z0A9) Oligoribonuclease (EC 3.1.-.-)| Length = 216 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = -3 Query: 321 RRCTVAIVFAEQH-----RLVAPTVKQIKGTVRRLSHDRASAHRNTPGSERDLHHEM 166 RR TV + AEQ R PT + + ++ DRA R+ P + LH+ M Sbjct: 74 RRSTVTVAEAEQQVLDYIRQYVPTPRTVPLAGNSIATDRAFIARDMPALDAHLHYRM 130
>I11RA_MOUSE (Q64385) Interleukin-11 receptor alpha-1 chain precursor| (IL-11R-alpha-1) (IL-11RA1) (IL-11R-alpha) (IL-11RA) (Enhancer trap locus homolog 2) (Etl-2) (NR-1) Length = 432 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = -3 Query: 426 RVLTHLPRALLQAAEMARGSADAWDVPCPRHPTAPRRCTV 307 R LT + L AE R S PCP+ P RC V Sbjct: 143 RYLTSYRKKTLPGAESQRESPSTGPWPCPQDPLEASRCVV 182 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,825,780 Number of Sequences: 219361 Number of extensions: 1880004 Number of successful extensions: 5063 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4878 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5063 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)