ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61e18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191150.1| Oryza sativa (japonica cultivar-group), predic... 238 2e-59
2dbj|AK068600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5gb|AY109774.1| Zea mays CL8808_2 mRNA sequence 127 5e-26
6gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
8dbj|AK071192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
9gb|DQ428200.1| Sorghum propinquum locus PRC0170 genomic sequence 72 2e-09
10gb|DQ428199.1| Sorghum bicolor voucher PI585454 locus PRC0170 ge... 72 2e-09
11gb|DQ428198.1| Sorghum bicolor voucher PI267539 locus PRC0170 ge... 72 2e-09
12gb|DQ428197.1| Sorghum bicolor voucher PI267408 locus PRC0170 ge... 72 2e-09
13gb|DQ428196.1| Sorghum bicolor voucher PI221607 locus PRC0170 ge... 72 2e-09
14gb|DQ428195.1| Sorghum bicolor voucher PI152702 locus PRC0170 ge... 72 2e-09
15gb|DQ428194.1| Sorghum bicolor voucher NSL92371 locus PRC0170 ge... 72 2e-09
16gb|DQ428193.1| Sorghum bicolor voucher NSL87902 locus PRC0170 ge... 72 2e-09
17gb|DQ428192.1| Sorghum bicolor voucher NSL87666 locus PRC0170 ge... 72 2e-09
18gb|DQ428191.1| Sorghum bicolor voucher NSL77217 locus PRC0170 ge... 72 2e-09
19gb|DQ428190.1| Sorghum bicolor voucher NSL77034 locus PRC0170 ge... 72 2e-09
20gb|DQ428189.1| Sorghum bicolor voucher NSL56174 locus PRC0170 ge... 72 2e-09
21gb|DQ428188.1| Sorghum bicolor voucher NSL56003 locus PRC0170 ge... 72 2e-09
22gb|DQ428187.1| Sorghum bicolor voucher NSL55243 locus PRC0170 ge... 72 2e-09
23gb|DQ428186.1| Sorghum bicolor voucher NSL51365 locus PRC0170 ge... 72 2e-09
24gb|DQ428185.1| Sorghum bicolor voucher NSL51030 locus PRC0170 ge... 72 2e-09
25gb|DQ428184.1| Sorghum bicolor voucher NSL50875 locus PRC0170 ge... 72 2e-09
26gb|DQ428183.1| Sorghum bicolor voucher BTx623 locus PRC0170 geno... 72 2e-09
27ref|NM_112521.3| Arabidopsis thaliana PAP1 (PHYTOCHROME-ASSOCIAT... 52 0.002
28gb|AY072502.1| Arabidopsis thaliana phytochrome-associated prote... 52 0.002
29gb|AF332394.2| Arabidopsis thaliana clone C00012 (f) auxin-induc... 52 0.002
30gb|AF332401.1| Arabidopsis thaliana clone C00023 (e) putative ph... 52 0.002
31gb|AF386948.1|AF386948 Arabidopsis thaliana phytochrome-associat... 52 0.002
32emb|BX823888.1|CNS0A4T7 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
33gb|AY087745.1| Arabidopsis thaliana clone 38146 mRNA, complete s... 52 0.002
34dbj|AP000373.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 52 0.002
35gb|AF088281.1|AF088281 Arabidopsis thaliana phytochrome-associat... 52 0.002
36gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced prote... 50 0.009
37gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protei... 50 0.009
38ref|NM_104076.3| Arabidopsis thaliana IAA18; transcription facto... 44 0.53
39gb|BT011845.1| Arabidopsis thaliana At1g51950 mRNA sequence 44 0.53
40gb|AY861338.1| Cottus gobio microsatellite LCB4 sequence 44 0.53
41gb|AY056062.1| Arabidopsis thaliana At1g51950/T14L22_14 mRNA, co... 44 0.53
42gb|AF367263.1|AF367263 Arabidopsis thaliana At1g51950/T14L22_14 ... 44 0.53
43emb|BX816411.1|CNS0ABWW Arabidopsis thaliana Full-length cDNA Co... 44 0.53
44emb|BX815487.1|CNS0ABJS Arabidopsis thaliana Full-length cDNA Co... 44 0.53
45emb|BX815119.1|CNS0AAM7 Arabidopsis thaliana Full-length cDNA Co... 44 0.53
46gb|AY088406.1| Arabidopsis thaliana clone 6493 mRNA, complete se... 44 0.53
47gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14... 44 0.53
48emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6 44 0.53
49emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (c... 44 0.53
50gb|U49074.1|ATU49074 Arabidopsis thaliana early auxin-induced (I... 44 0.53
51gb|AY669797.1| Arabidopsis thaliana clone C105335 IAA18 (At1g519... 44 0.53
52dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone... 44 0.53
53ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa821... 42 2.1
54ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.1
55gb|AF143315.1|PTEN4 Homo sapiens PTEN (PTEN) gene, exons 6 throu... 42 2.1
56ref|XM_424617.1| PREDICTED: Gallus gallus similar to p53-induced... 42 2.1
57gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated pro... 42 2.1
58emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, ... 42 2.1
59gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, comp... 42 2.1
60gb|DQ073384.1| Homo sapiens phosphatase and tensin homolog (muta... 42 2.1
61dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
62gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16... 42 2.1
63dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
64gb|AC021045.2|AC021045 Arabidopsis thaliana chromosome I BAC T9L... 42 2.1
65dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
66dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
67emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1... 42 2.1
68dbj|AB073166.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 42 2.1
69dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
70dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
71dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
72dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
73gb|AF147260.1|F14G16 Arabidopsis thaliana BAC F14G16 42 2.1
74gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, co... 42 2.1
75gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, co... 40 8.3
76gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 8.3
77gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.3
78emb|AL391241.21| Human DNA sequence from clone RP13-158L7 on chr... 40 8.3
79emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16... 40 8.3
80emb|BX511272.9| Zebrafish DNA sequence from clone DKEY-276L13 in... 40 8.3
81emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in... 40 8.3
82gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, comple... 40 8.3
83gb|AC010238.6| Homo sapiens chromosome 5 clone CTC-349C3, comple... 40 8.3
84gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987S... 40 8.3
85dbj|AB026821.1| Cucumis sativus CsIAA1 mRNA for Aux/IAA protein,... 40 8.3
86gb|AC127247.3| Mus musculus BAC clone RP24-435G16 from 3, comple... 40 8.3
87dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.3 
>ref|NM_191150.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score =  238 bits (120), Expect = 2e-59
 Identities = 282/336 (83%)
 Strand = Plus / Minus

                                                                       
Query: 276 atgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaacacatt 335
           |||||| ||||| || ||||| |||||||||||||||||||| ||||||||||| || ||
Sbjct: 978 atgggaaagctctgaactccttagaaccctcagccttttagcagttgagacaaatacttt 919

                                                                       
Query: 336 ccaagggacatccccaaccagcatcctgtctccttcattgtcttcgtaaactagggtata 395
           ||| || || ||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 918 ccatggcacgtccccaaccagcatcctgtctccttcactgtcttcataaactagagtata 859

                                                                       
Query: 396 ttcaccggacccgtccagcaattgcgaaaatattttttcatctgctccttgctgtgcacg 455
           |||||| ||||| |||| ||||||  |||||||||| |||||||| ||||||||||||  
Sbjct: 858 ttcaccagacccatccaacaattgataaaatattttgtcatctgcaccttgctgtgcaat 799

                                                                       
Query: 456 ttcagccctaggcgtgtccctttgcacttcaagaaacccatggaagagatctttgacagc 515
           ||  ||  |||    |||| ||||  ||| |||||||||||||||||| | |||||||||
Sbjct: 798 ttgcgcattagtttggtccttttgagcttgaagaaacccatggaagagttgtttgacagc 739

                                                                       
Query: 516 caatgaaagtctctcgtagctgtcgcatgctgcaagatcaactttccttccaatggggat 575
             | || || |  || |||||||   | |||||||| || | |||||||||||| |||||
Sbjct: 738 tgacgatagcccatcatagctgttataggctgcaaggtctattttccttccaatagggat 679

                                               
Query: 576 cccatccatgttgatttttacgagagggcttttctt 611
           ||||||||||||||||||||| |||||| |||||||
Sbjct: 678 cccatccatgttgatttttacaagagggtttttctt 643
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>dbj|AK068600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154A18, full
            insert sequence
          Length = 2214

 Score =  194 bits (98), Expect = 2e-46
 Identities = 158/178 (88%)
 Strand = Plus / Minus

                                                                        
Query: 276  atgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaacacatt 335
            |||||| ||||| || ||||| |||||||||||||||||||| ||||||||||| || ||
Sbjct: 1835 atgggaaagctctgaactccttagaaccctcagccttttagcagttgagacaaatacttt 1776

                                                                        
Query: 336  ccaagggacatccccaaccagcatcctgtctccttcattgtcttcgtaaactagggtata 395
            ||| || || ||||||||||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 1775 ccatggcacgtccccaaccagcatcctgtctccttcactgtcttcataaactagagtata 1716

                                                                      
Query: 396  ttcaccggacccgtccagcaattgcgaaaatattttttcatctgctccttgctgtgca 453
            |||||| ||||| |||| ||||||  |||||||||| |||||||| ||||||||||||
Sbjct: 1715 ttcaccagacccatccaacaattgataaaatattttgtcatctgcaccttgctgtgca 1658



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 544  gctgcaagatcaactttccttccaatggggatcccatccatgttgatttttacgagaggg 603
            |||||||| || | |||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1567 gctgcaaggtctattttccttccaatagggatcccatccatgttgatttttacaagaggg 1508

                    
Query: 604  cttttctt 611
             |||||||
Sbjct: 1507 tttttctt 1500
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 98/108 (90%)
 Strand = Plus / Minus

                                                                            
Query: 346      tccccaaccagcatcctgtctccttcattgtcttcgtaaactagggtatattcaccggac 405
                ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||
Sbjct: 30971852 tccccaaccagcatcctgtctccttcactgtcttcataaactagagtatattcaccagac 30971793

                                                                
Query: 406      ccgtccagcaattgcgaaaatattttttcatctgctccttgctgtgca 453
                || |||| ||||||  |||||||||| |||||||| ||||||||||||
Sbjct: 30971792 ccatccaacaattgataaaatattttgtcatctgcaccttgctgtgca 30971745



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                            
Query: 486      aagaaacccatggaagagatctttgacagccaatgaaagtctctcgtagctgtcgcatgc 545
                |||||||||||||||||| | |||||||||  | || || |  || |||||||   | ||
Sbjct: 30971631 aagaaacccatggaagagttgtttgacagctgacgatagcccatcatagctgttataggc 30971572

                                                                            
Query: 546      tgcaagatcaactttccttccaatggggatcccatccatgttgatttttacgagagggct 605
                |||||| || | |||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct: 30971571 tgcaaggtctattttccttccaatagggatcccatccatgttgatttttacaagagggtt 30971512

                      
Query: 606      tttctt 611
                ||||||
Sbjct: 30971511 tttctt 30971506



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 276      atgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
                |||||| ||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 30972076 atgggaaagctctgaactccttagaaccctcagccttttagcagttgagacaaa 30972023



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 343     acatccccaaccagcatcctgtctccttcattgtcttcgta 383
               ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 7251215 acatcaccaaccagcatccagtcaccatccttgtcttcgta 7251175
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score =  135 bits (68), Expect = 2e-28
 Identities = 98/108 (90%)
 Strand = Plus / Minus

                                                                         
Query: 346   tccccaaccagcatcctgtctccttcattgtcttcgtaaactagggtatattcaccggac 405
             ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||
Sbjct: 28831 tccccaaccagcatcctgtctccttcactgtcttcataaactagagtatattcaccagac 28772

                                                             
Query: 406   ccgtccagcaattgcgaaaatattttttcatctgctccttgctgtgca 453
             || |||| ||||||  |||||||||| |||||||| ||||||||||||
Sbjct: 28771 ccatccaacaattgataaaatattttgtcatctgcaccttgctgtgca 28724



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 106/126 (84%)
 Strand = Plus / Minus

                                                                         
Query: 486   aagaaacccatggaagagatctttgacagccaatgaaagtctctcgtagctgtcgcatgc 545
             |||||||||||||||||| | |||||||||  | || || |  || |||||||   | ||
Sbjct: 28610 aagaaacccatggaagagttgtttgacagctgacgatagcccatcatagctgttataggc 28551

                                                                         
Query: 546   tgcaagatcaactttccttccaatggggatcccatccatgttgatttttacgagagggct 605
             |||||| || | |||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct: 28550 tgcaaggtctattttccttccaatagggatcccatccatgttgatttttacaagagggtt 28491

                   
Query: 606   tttctt 611
             ||||||
Sbjct: 28490 tttctt 28485



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 276   atgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
             |||||| ||||| || ||||| |||||||||||||||||||| |||||||||||
Sbjct: 29055 atgggaaagctctgaactccttagaaccctcagccttttagcagttgagacaaa 29002
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>gb|AY109774.1| Zea mays CL8808_2 mRNA sequence
          Length = 628

 Score =  127 bits (64), Expect = 5e-26
 Identities = 103/116 (88%)
 Strand = Plus / Plus

                                                                       
Query: 283 agctccgagctcctcagaaccctcagccttttagcggttgagacaaacacattccaaggg 342
           |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| || 
Sbjct: 403 agctccgagctcctcaaaaccctcagccttttagcagttgacacaaacacattccacggc 462

                                                                   
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttcgtaaactagggtatattc 398
           || ||||| ||||||||| |||||||||| |||| |||||| || ||||| |||||
Sbjct: 463 acgtcccctaccagcatcgtgtctccttcgttgtgttcgtagaccagggtttattc 518



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  ggtagcctaatttacaaaata 77
           |||||||||||||||||||||
Sbjct: 251 ggtagcctaatttacaaaata 271
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0075A10, complete sequence
          Length = 171101

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                     
Query: 556   actttccttccaatggggatcccatccatgttgatttttacgagagggcttttctt 611
             |||||||||||||||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 87830 actttccttccaatggggatcccatccatgttgattttgacaagaggtctcttctt 87885
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 556      actttccttccaatggggatcccatccatgttgatttttacgagagggcttttctt 611
                |||||||||||||||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 25846298 actttccttccaatggggatcccatccatgttgattttgacaagaggtctcttctt 25846353
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>dbj|AK071192.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087E13, full
           insert sequence
          Length = 1397

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 556 actttccttccaatggggatcccatccatgttgatttttacgagagggcttttctt 611
           |||||||||||||||||||||||||||||||||||||| || ||||| || |||||
Sbjct: 861 actttccttccaatggggatcccatccatgttgattttgacaagaggtctcttctt 806
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>gb|DQ428200.1| Sorghum propinquum locus PRC0170 genomic sequence
          Length = 764

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
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>gb|DQ428199.1| Sorghum bicolor voucher PI585454 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
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>gb|DQ428198.1| Sorghum bicolor voucher PI267539 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
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>gb|DQ428197.1| Sorghum bicolor voucher PI267408 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
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>gb|DQ428196.1| Sorghum bicolor voucher PI221607 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428195.1| Sorghum bicolor voucher PI152702 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428194.1| Sorghum bicolor voucher NSL92371 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428193.1| Sorghum bicolor voucher NSL87902 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428192.1| Sorghum bicolor voucher NSL87666 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428191.1| Sorghum bicolor voucher NSL77217 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428190.1| Sorghum bicolor voucher NSL77034 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428189.1| Sorghum bicolor voucher NSL56174 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428188.1| Sorghum bicolor voucher NSL56003 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 268 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 213



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 582 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 539
to top
>gb|DQ428187.1| Sorghum bicolor voucher NSL55243 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428186.1| Sorghum bicolor voucher NSL51365 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428185.1| Sorghum bicolor voucher NSL51030 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428184.1| Sorghum bicolor voucher NSL50875 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>gb|DQ428183.1| Sorghum bicolor voucher BTx623 locus PRC0170 genomic sequence
          Length = 758

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 274 ccatgggagagctccgagctcctcagaaccctcagccttttagcggttgagacaaa 329
           |||||||| ||||| |||||||||| |||||||||||||||||| ||||| |||||
Sbjct: 267 ccatgggaaagctctgagctcctcaaaaccctcagccttttagcagttgacacaaa 212



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 57  ggtagcctaatttacaaaatagtcaggatatctccatgcatctg 100
           |||||||||||||||||||||  |||||  ||||||||||||||
Sbjct: 588 ggtagcctaatttacaaaatatccaggacctctccatgcatctg 545
to top
>ref|NM_112521.3| Arabidopsis thaliana PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1);
           transcription factor AT3G16500 (PAP1) mRNA, complete cds
          Length = 1313

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 900 acatccccaacaagcatcttgtccccttcattgtcttc 863
to top
>gb|AY072502.1| Arabidopsis thaliana phytochrome-associated protein 1 (At3g16500;
           MDC8.13) mRNA, complete cds
          Length = 855

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 698 acatccccaacaagcatcttgtccccttcattgtcttc 661
to top
>gb|AF332394.2| Arabidopsis thaliana clone C00012 (f) auxin-induced protein AUX2-11
           (At5g43700) mRNA, complete cds
          Length = 810

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 698 acatccccaacaagcatcttgtccccttcattgtcttc 661
to top
>gb|AF332401.1| Arabidopsis thaliana clone C00023 (e) putative
           phytochrome-associated protein 1 (At3g16500) mRNA,
           complete cds
          Length = 810

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 698 acatccccaacaagcatcttgtccccttcattgtcttc 661
to top
>gb|AF386948.1|AF386948 Arabidopsis thaliana phytochrome-associated protein 1 (MDC8.13)
           mRNA, complete cds
          Length = 1045

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 834 acatccccaacaagcatcttgtccccttcattgtcttc 797
to top
>emb|BX823888.1|CNS0A4T7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZH11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1280

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 900 acatccccaacaagcatcttgtccccttcattgtcttc 863
to top
>gb|AY087745.1| Arabidopsis thaliana clone 38146 mRNA, complete sequence
          Length = 1030

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 835 acatccccaacaagcatcttgtccccttcattgtcttc 798
to top
>dbj|AP000373.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC8
          Length = 71521

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 343   acatccccaaccagcatcctgtctccttcattgtcttc 380
             ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 50779 acatccccaacaagcatcttgtccccttcattgtcttc 50816
to top
>gb|AF088281.1|AF088281 Arabidopsis thaliana phytochrome-associated protein 1 (PAP1) mRNA,
           complete cds
          Length = 1000

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttc 380
           ||||||||||| |||||| |||| ||||||||||||||
Sbjct: 778 acatccccaacaagcatcttgtccccttcattgtcttc 741
to top
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds
          Length = 884

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 336 ccaagggacatccccaaccagcatcctgtctccttcattgtcttcgtaa 384
           |||||| ||||| ||||| ||||||| |||||| || ||||||||||||
Sbjct: 639 ccaaggtacatcaccaacaagcatccagtctccatctttgtcttcgtaa 591
to top
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds
          Length = 943

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 336 ccaagggacatccccaaccagcatcctgtctccttcattgtcttcgtaa 384
           |||||| ||||| ||||| ||||||| |||||| || ||||||||||||
Sbjct: 681 ccaaggtacatcaccaacaagcatccagtctccatccttgtcttcgtaa 633
to top
>ref|NM_104076.3| Arabidopsis thaliana IAA18; transcription factor AT1G51950 (IAA18)
            mRNA, complete cds
          Length = 1539

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 355  agcatcctgtctccttcattgtcttc 380
            |||||| |||||||||||||||||||
Sbjct: 1035 agcatcttgtctccttcattgtcttc 1010
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>gb|BT011845.1| Arabidopsis thaliana At1g51950 mRNA sequence
          Length = 801

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 677 agcatcttgtctccttcattgtcttc 652
to top
>gb|AY861338.1| Cottus gobio microsatellite LCB4 sequence
          Length = 952

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 345 atccccaaccagcatcctgtct 366
           ||||||||||||||||||||||
Sbjct: 849 atccccaaccagcatcctgtct 828
to top
>gb|AY056062.1| Arabidopsis thaliana At1g51950/T14L22_14 mRNA, complete cds
          Length = 804

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 680 agcatcttgtctccttcattgtcttc 655
to top
>gb|AF367263.1|AF367263 Arabidopsis thaliana At1g51950/T14L22_14 mRNA, complete cds
          Length = 1303

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 940 agcatcttgtctccttcattgtcttc 915
to top
>emb|BX816411.1|CNS0ABWW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH46ZH10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 400

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 56  agcatcttgtctccttcattgtcttc 31
to top
>emb|BX815487.1|CNS0ABJS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS66ZB02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 702

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 282 agcatcttgtctccttcattgtcttc 257
to top
>emb|BX815119.1|CNS0AAM7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS35ZA09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1332

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 355  agcatcctgtctccttcattgtcttc 380
            |||||| |||||||||||||||||||
Sbjct: 1027 agcatcttgtctccttcattgtcttc 1002
to top
>gb|AY088406.1| Arabidopsis thaliana clone 6493 mRNA, complete sequence
          Length = 1303

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 940 agcatcttgtctccttcattgtcttc 915
to top
>gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14L22 genomic sequence, complete
             sequence
          Length = 95581

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 355   agcatcctgtctccttcattgtcttc 380
             |||||| |||||||||||||||||||
Sbjct: 84387 agcatcttgtctccttcattgtcttc 84362
to top
>emb|X68218.1|PSIAA6D P.sativum gene for PS-IAA6
          Length = 5923

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 336  ccaagggacatccccaaccagcatcc 361
            |||||||||||| |||||||||||||
Sbjct: 4418 ccaagggacatctccaaccagcatcc 4393
to top
>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6)
          Length = 702

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 336 ccaagggacatccccaaccagcatcc 361
           |||||||||||| |||||||||||||
Sbjct: 370 ccaagggacatctccaaccagcatcc 345
to top
>gb|U49074.1|ATU49074 Arabidopsis thaliana early auxin-induced (IAA18) mRNA, partial cds
          Length = 980

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 588 agcatcttgtctccttcattgtcttc 563
to top
>gb|AY669797.1| Arabidopsis thaliana clone C105335 IAA18 (At1g51950) mRNA, complete
           cds
          Length = 835

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 355 agcatcctgtctccttcattgtcttc 380
           |||||| |||||||||||||||||||
Sbjct: 680 agcatcttgtctccttcattgtcttc 655
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>dbj|AP006130.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36O13, TM0226,
             complete sequence
          Length = 140838

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 336   ccaagggacatccccaaccagcatcc 361
             |||||||||||| |||||||||||||
Sbjct: 57579 ccaagggacatctccaaccagcatcc 57554
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>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA
          Length = 846

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttcgta 383
           ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 737 acatcaccaaccagcatccagtcaccatccttgtcttcgta 697
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>ref|XM_466220.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3110

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 336  ccaagggacatccccaaccagcatc 360
            ||||||| |||||||||||||||||
Sbjct: 2149 ccaagggtcatccccaaccagcatc 2125
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>gb|AF143315.1|PTEN4 Homo sapiens PTEN (PTEN) gene, exons 6 through 9 and complete cds
          Length = 17122

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 231  agttcagcaatttgctgctct 251
            |||||||||||||||||||||
Sbjct: 2904 agttcagcaatttgctgctct 2924
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>ref|XM_424617.1| PREDICTED: Gallus gallus similar to p53-induced protein
           (LOC427015), mRNA
          Length = 1157

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 353 ccagcatcctgtctccttcat 373
           |||||||||||||||||||||
Sbjct: 958 ccagcatcctgtctccttcat 978
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>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA,
           complete cds
          Length = 1228

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 336 ccaagggacatccccaaccagcatcctgtctcc 368
           |||||| ||||||||||| ||||||| ||||||
Sbjct: 816 ccaaggaacatccccaacaagcatccagtctcc 784
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>emb|AL161505.2|ATCHRIV17 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 17
          Length = 198176

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 347  ccccaaccagcatcctgtctccttcattgtctt 379
            ||||||| |||||| | ||||||||||||||||
Sbjct: 3738 ccccaacaagcatcatatctccttcattgtctt 3706
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>gb|AC063965.8| Homo sapiens chromosome 10 clone RP11-380G5, complete sequence
          Length = 201536

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 231   agttcagcaatttgctgctct 251
             |||||||||||||||||||||
Sbjct: 96157 agttcagcaatttgctgctct 96137
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>gb|DQ073384.1| Homo sapiens phosphatase and tensin homolog (mutated in multiple
             advanced cancers 1) (PTEN) gene, complete cds
          Length = 106765

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   agttcagcaatttgctgctct 251
             |||||||||||||||||||||
Sbjct: 91104 agttcagcaatttgctgctct 91124
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 336      ccaagggacatccccaaccagcatc 360
                ||||||| |||||||||||||||||
Sbjct: 21122318 ccaagggtcatccccaaccagcatc 21122294
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>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete
             sequence
          Length = 81609

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 347   ccccaaccagcatcctgtctccttcattgtctt 379
             ||||||| |||||| | ||||||||||||||||
Sbjct: 12592 ccccaacaagcatcatatctccttcattgtctt 12560
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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485D09
          Length = 150594

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 343    acatccccaaccagcatcctgtctccttcattgtcttcgta 383
              ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 145863 acatcaccaaccagcatccagtcaccatccttgtcttcgta 145823
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>gb|AC021045.2|AC021045 Arabidopsis thaliana chromosome I BAC T9L6 genomic sequence, complete
             sequence
          Length = 90632

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 347   ccccaaccagcatcctgtctccttcattgtctt 379
             ||||||| |||||| | ||||||||||||||||
Sbjct: 68856 ccccaacaagcatcatatctccttcattgtctt 68824
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>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 343   acatccccaaccagcatcctgtctccttcattgtcttcgta 383
             ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 52645 acatcaccaaccagcatccagtcaccatccttgtcttcgta 52605
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 336   ccaagggacatccccaaccagcatc 360
             ||||||| |||||||||||||||||
Sbjct: 29034 ccaagggtcatccccaaccagcatc 29010
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>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein
          Length = 1104

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 340 gggacatccccaaccagcatcctgtctccttcattgtcttcgtaa 384
           ||||| || ||||| ||||||| |||||| || ||||||||||||
Sbjct: 672 gggacgtctccaacaagcatccagtctccatccttgtcttcgtaa 628
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>dbj|AB073166.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
              clone:F15N16
          Length = 123460

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 347    ccccaaccagcatcctgtctccttcattgtctt 379
              ||||||| |||||| | ||||||||||||||||
Sbjct: 100153 ccccaacaagcatcatatctccttcattgtctt 100121
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>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full
           insert sequence
          Length = 1209

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttcgta 383
           ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 721 acatcaccaaccagcatccagtcaccatccttgtcttcgta 681
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>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full
           insert sequence
          Length = 1291

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttcgta 383
           ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 818 acatcaccaaccagcatccagtcaccatccttgtcttcgta 778
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>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full
            insert sequence
          Length = 3106

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 336  ccaagggacatccccaaccagcatc 360
            ||||||| |||||||||||||||||
Sbjct: 2149 ccaagggtcatccccaaccagcatc 2125
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>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full
           insert sequence
          Length = 1194

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 343 acatccccaaccagcatcctgtctccttcattgtcttcgta 383
           ||||| ||||||||||||| ||| || || |||||||||||
Sbjct: 769 acatcaccaaccagcatccagtcaccatccttgtcttcgta 729
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>gb|AF147260.1|F14G16 Arabidopsis thaliana BAC F14G16
          Length = 63292

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 347  ccccaaccagcatcctgtctccttcattgtctt 379
            ||||||| |||||| | ||||||||||||||||
Sbjct: 3738 ccccaacaagcatcatatctccttcattgtctt 3706
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>gb|AF067844.1|AF067844 Homo sapiens chromosome 10 clone PTEN, complete sequence
          Length = 218336

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    agttcagcaatttgctgctct 251
              |||||||||||||||||||||
Sbjct: 110568 agttcagcaatttgctgctct 110588
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>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    atagtcaggatatctccatg 94
             ||||||||||||||||||||
Sbjct: 51973 atagtcaggatatctccatg 51954
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    taactccagccaggccatgg 279
              ||||||||||||||||||||
Sbjct: 169282 taactccagccaggccatgg 169301
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 219     aaagccgccatcagttcagcaatt 242
               ||||||||||||| ||||||||||
Sbjct: 4167184 aaagccgccatcatttcagcaatt 4167161
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>emb|AL391241.21| Human DNA sequence from clone RP13-158L7 on chromosome X Contains a zinc
              finger pseudogene, heat shock 70kD protein 8 (HSPA8)
              pseudogene and a nucleophosmin (nucleolar phosphoprotein
              B23, numatrin (NPM1)) pseudogene, complete sequence
          Length = 157860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    agctcctcagaaccctcagc 309
              ||||||||||||||||||||
Sbjct: 123323 agctcctcagaaccctcagc 123304
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>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13,
             complete sequence
          Length = 134506

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   ccagccaggccatgggagag 284
             ||||||||||||||||||||
Sbjct: 26707 ccagccaggccatgggagag 26688
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>emb|BX511272.9| Zebrafish DNA sequence from clone DKEY-276L13 in linkage group 6,
             complete sequence
          Length = 208912

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ctaatttacaaaatagtcag 82
             ||||||||||||||||||||
Sbjct: 65180 ctaatttacaaaatagtcag 65161
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>emb|BX640518.5| Zebrafish DNA sequence from clone DKEY-278M12 in linkage group 24,
              complete sequence
          Length = 215186

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 579    atccatgttgatttttacga 598
              ||||||||||||||||||||
Sbjct: 119091 atccatgttgatttttacga 119072
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>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence
          Length = 178030

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gttcagcaatttgctgctct 251
              ||||||||||||||||||||
Sbjct: 177193 gttcagcaatttgctgctct 177174
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>gb|AC010238.6| Homo sapiens chromosome 5 clone CTC-349C3, complete sequence
          Length = 167022

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   gttcagcaatttgctgctct 251
             ||||||||||||||||||||
Sbjct: 90486 gttcagcaatttgctgctct 90505
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>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence
          Length = 171368

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    ccagccaggccatgggagag 284
              ||||||||||||||||||||
Sbjct: 119223 ccagccaggccatgggagag 119242
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>dbj|AB026821.1| Cucumis sativus CsIAA1 mRNA for Aux/IAA protein, complete cds
          Length = 919

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 334 ttccaagggacatccccaaccagcatcc 361
           |||||||| ||||||||||||| |||||
Sbjct: 484 ttccaaggcacatccccaaccaacatcc 457
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>gb|AC127247.3| Mus musculus BAC clone RP24-435G16 from 3, complete sequence
          Length = 181566

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   aaatattttttcatctgctc 442
             ||||||||||||||||||||
Sbjct: 97722 aaatattttttcatctgctc 97703
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>dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT27L02, TM0144,
             complete sequence
          Length = 89959

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ccaagggacatccccaacca 355
             ||||||||||||||||||||
Sbjct: 69654 ccaagggacatccccaacca 69673


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,488,033
Number of Sequences: 3902068
Number of extensions: 5488033
Number of successful extensions: 94446
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94137
Number of HSP's gapped (non-prelim): 309
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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