ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbah61e16 |
|---|---|
| Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 162 bits (411), Expect(2) = 3e-49 Identities = 82/90 (91%), Positives = 82/90 (91%) Frame = -2 Query: 327 VHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ 148 VHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ Sbjct: 120 VHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ 179 Query: 147 XXXXXXXXGVSGAVWAYFLLYVLDLPYFFK 58 GVSGAVWAYFLLYVLDLPYFFK Sbjct: 180 FTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209 Score = 50.4 bits (119), Expect(2) = 3e-49 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTP 329 GLAHGYLLVGPFALTGPLRNTP Sbjct: 98 GLAHGYLLVGPFALTGPLRNTP 119
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 127 bits (318), Expect(2) = 4e-35 Identities = 62/88 (70%), Positives = 70/88 (79%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG+L A GL+ ILSVCLTMYGVASFNEGEPSTAP LTLTGRKK D LQTA+GW++ Sbjct: 130 GGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFS 189 Query: 141 XXXXXXGVSGAVWAYFLLYVLDLPYFFK 58 G+SG +WAYFLLYVLDLPY+ K Sbjct: 190 GGFFFGGISGVIWAYFLLYVLDLPYYVK 217 Score = 38.9 bits (89), Expect(2) = 4e-35 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 GLAHG+ LVGPF GPLRNT Sbjct: 106 GLAHGFFLVGPFVKAGPLRNT 126
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 121 bits (304), Expect(2) = 6e-34 Identities = 58/88 (65%), Positives = 69/88 (78%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG+L A GLV ILS+CLTMYG+ASF EGEPS AP LTLTGRKK+ D+LQ+A+GW++ Sbjct: 129 GAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFT 188 Query: 141 XXXXXXGVSGAVWAYFLLYVLDLPYFFK 58 GVSG WA FL+YVLDLPY+FK Sbjct: 189 GGFFFGGVSGVTWACFLMYVLDLPYYFK 216 Score = 40.4 bits (93), Expect(2) = 6e-34 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 GLAHG+LLVGPF GPLRNT Sbjct: 105 GLAHGFLLVGPFVKAGPLRNT 125
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 122 bits (306), Expect(2) = 1e-33 Identities = 58/88 (65%), Positives = 69/88 (78%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG+L A GLV ILS+CLT+YG++SF EGEPS AP LTLTGRKK+ D+LQTA+GW++ Sbjct: 132 GSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFT 191 Query: 141 XXXXXXGVSGAVWAYFLLYVLDLPYFFK 58 G+SG WAYFLLYVLDLPYF K Sbjct: 192 GGFFFGGISGVTWAYFLLYVLDLPYFVK 219 Score = 38.9 bits (89), Expect(2) = 1e-33 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 GLAHG+ LVGPF GPLRNT Sbjct: 108 GLAHGFFLVGPFVKAGPLRNT 128
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 52.0 bits (123), Expect(2) = 1e-12 Identities = 29/76 (38%), Positives = 39/76 (51%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 +G L A+GL+ IL+VCL+MYG SF++ + D LQT EGW Q Sbjct: 77 SGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAG 122 Query: 135 XXXXGVSGAVWAYFLL 88 V G+ +AY LL Sbjct: 123 FLVGAVGGSGFAYLLL 138 Score = 38.5 bits (88), Expect(2) = 1e-12 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY LVGPF GPLRNT Sbjct: 51 GMAHGYFLVGPFDKLGPLRNT 71
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 49.3 bits (116), Expect(2) = 3e-12 Identities = 30/77 (38%), Positives = 42/77 (54%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG L +GLV IL+VCL++YG N G +A T+T +L T EGWS+ Sbjct: 75 GSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEGWSEFT 129 Query: 141 XXXXXXGVSGAVWAYFL 91 G+ GA +A++L Sbjct: 130 SGFILGGLGGAFFAFYL 146 Score = 39.7 bits (91), Expect(2) = 3e-12 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHG+LL GPF++ GPLRNT A Sbjct: 51 GMAHGFLLYGPFSILGPLRNTETA 74
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 52.8 bits (125), Expect(2) = 4e-12 Identities = 30/76 (39%), Positives = 37/76 (48%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG L ++GL+ IL+ CL+MYG SF R D LQTAEGW Q Sbjct: 77 AGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAG 122 Query: 135 XXXXGVSGAVWAYFLL 88 V G+ +AY LL Sbjct: 123 FLVGAVGGSGFAYLLL 138 Score = 35.8 bits (81), Expect(2) = 4e-12 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GPF GPLR T Sbjct: 51 GMAHGYFLIGPFDKLGPLRGT 71
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 47.8 bits (112), Expect(2) = 1e-11 Identities = 30/85 (35%), Positives = 42/85 (49%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG LG +GL+S+L++ L++YG + P TLT + L T EGWS+ Sbjct: 73 GVAGLLGTVGLISLLTLALSLYGSVGV------STPTATLT-TPNPPENLGTKEGWSEFA 125 Query: 141 XXXXXXGVSGAVWAYFLLYVLDLPY 67 G GA+ AY L L + Y Sbjct: 126 AGFLIGGCGGALVAYGLCIALPMMY 150 Score = 39.3 bits (90), Expect(2) = 1e-11 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRN 335 G+AHGY L GPFAL GPLRN Sbjct: 49 GMAHGYFLYGPFALLGPLRN 68
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 49.3 bits (116), Expect(2) = 1e-11 Identities = 30/77 (38%), Positives = 42/77 (54%) Frame = -2 Query: 321 GQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXX 142 G AG L +GLV IL+VCL++YG N G +A T+T +L T EGWS+ Sbjct: 74 GSAGLLATVGLVVILTVCLSLYG----NAGSGPSAAESTVT-TPNPPQELFTKEGWSEFT 128 Query: 141 XXXXXXGVSGAVWAYFL 91 G+ GA +A++L Sbjct: 129 SGFILGGLGGAFFAFYL 145 Score = 37.4 bits (85), Expect(2) = 1e-11 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHG+LL GP ++ GPLRNT A Sbjct: 50 GMAHGFLLYGPLSILGPLRNTETA 73
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 49.3 bits (116), Expect(2) = 1e-11 Identities = 27/76 (35%), Positives = 38/76 (50%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 +G + AIGL+ I S+ + +YG+ +F+ E + DKLQTA GW Q Sbjct: 77 SGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASG 122 Query: 135 XXXXGVSGAVWAYFLL 88 V GA +AY LL Sbjct: 123 FLLGAVGGAGFAYILL 138 Score = 37.4 bits (85), Expect(2) = 1e-11 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY ++GPF GPLRNT Sbjct: 51 GMAHGYFIIGPFYKLGPLRNT 71
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 49.3 bits (116), Expect(2) = 5e-11 Identities = 25/76 (32%), Positives = 38/76 (50%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG A+GL+ I++ CL +YGV SFN + ++LQ+A+GW Q Sbjct: 77 AGVFSALGLIIIMAACLAIYGVVSFNTND--------------GGEQLQSAKGWRQFTSG 122 Query: 135 XXXXGVSGAVWAYFLL 88 + GA +AY L+ Sbjct: 123 WLVGSIGGASFAYILI 138 Score = 35.4 bits (80), Expect(2) = 5e-11 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+ HGY LVGPF GPLRN+ Sbjct: 51 GMTHGYFLVGPFYKLGPLRNS 71
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 46.6 bits (109), Expect(2) = 2e-10 Identities = 26/75 (34%), Positives = 37/75 (49%) Frame = -2 Query: 312 GTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXX 133 G +GA+ L+ + + L+ YG+ +F G + D LQTA+GWSQ Sbjct: 81 GLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTADGWSQFAAGF 127 Query: 132 XXXGVSGAVWAYFLL 88 G+ GA AYFLL Sbjct: 128 FVGGMGGAFVAYFLL 142 Score = 35.8 bits (81), Expect(2) = 2e-10 Identities = 13/21 (61%), Positives = 18/21 (85%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GP+ L GPLR++ Sbjct: 54 GMAHGYFLIGPWTLLGPLRDS 74
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 44.3 bits (103), Expect(2) = 9e-10 Identities = 27/75 (36%), Positives = 38/75 (50%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG LGAIGLV + ++ L++Y N P+ +T+ D Q+ EGW+ Sbjct: 93 AGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTVPN---PPDAFQSKEGWNNFASA 145 Query: 135 XXXXGVSGAVWAYFL 91 G+ GAV AYFL Sbjct: 146 FLIGGIGGAVVAYFL 160 Score = 36.2 bits (82), Expect(2) = 9e-10 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHGY L GPFA GPLR+ A Sbjct: 67 GMAHGYFLFGPFAKLGPLRDAANA 90
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 41.2 bits (95), Expect(2) = 1e-09 Identities = 24/76 (31%), Positives = 35/76 (46%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG L AIGL+ IL++ + +YG SF ++ L++ +GW Q Sbjct: 77 AGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLESVDGWRQLASG 120 Query: 135 XXXXGVSGAVWAYFLL 88 V GA +AY LL Sbjct: 121 FLLGAVGGAGFAYLLL 136 Score = 38.9 bits (89), Expect(2) = 1e-09 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GPF GPLRNT Sbjct: 51 GMAHGYFLIGPFVQLGPLRNT 71
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 41.6 bits (96), Expect(2) = 2e-09 Identities = 29/81 (35%), Positives = 39/81 (48%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG L A+GL+ IL+ LT+Y +P T EA Q++EGW+ Sbjct: 93 AGLLSALGLIIILTGALTLYA-----NSKPPKPVKSVATPNPPEA--FQSSEGWNNFASA 145 Query: 135 XXXXGVSGAVWAYFLLYVLDL 73 G+ GAV AYFL L+L Sbjct: 146 FLIGGIGGAVVAYFLTSNLEL 166 Score = 38.1 bits (87), Expect(2) = 2e-09 Identities = 16/24 (66%), Positives = 18/24 (75%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHGY + GPFA GPLRNT A Sbjct: 67 GMAHGYWIFGPFAKLGPLRNTVNA 90
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 43.5 bits (101), Expect(2) = 2e-09 Identities = 27/75 (36%), Positives = 37/75 (49%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG LGAIGLV + ++ L++Y N P +T+ D Q+ EGW+ Sbjct: 93 AGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTVPN---PPDAFQSKEGWNNFASA 145 Query: 135 XXXXGVSGAVWAYFL 91 G+ GAV AYFL Sbjct: 146 FLIGGIGGAVVAYFL 160 Score = 36.2 bits (82), Expect(2) = 2e-09 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHGY L GPFA GPLR+ A Sbjct: 67 GMAHGYFLFGPFAKLGPLRDAANA 90
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 42.4 bits (98), Expect(2) = 2e-09 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNTPGA 323 G+AHGY L+GPF + GPLRN+P A Sbjct: 53 GMAHGYFLIGPFYILGPLRNSPNA 76 Score = 37.4 bits (85), Expect(2) = 2e-09 Identities = 21/75 (28%), Positives = 34/75 (45%) Frame = -2 Query: 312 GTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXX 133 G A GL+ IL++ LT+YG+ASF + + L++++GW Sbjct: 80 GLFSAFGLIIILTLALTIYGLASFQD--------------NGVGENLESSKGWRNFTSGF 125 Query: 132 XXXGVSGAVWAYFLL 88 + GA AY +L Sbjct: 126 TIGALGGASVAYLVL 140
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 44.3 bits (103), Expect(2) = 6e-09 Identities = 24/75 (32%), Positives = 35/75 (46%) Frame = -2 Query: 312 GTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXX 133 G + I L+ + + CL YG+ SF +G S +D L+T+EGWSQ Sbjct: 79 GLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKTSEGWSQFTAGF 125 Query: 132 XXXGVSGAVWAYFLL 88 + A A+FLL Sbjct: 126 FVGAMGSAFVAFFLL 140 Score = 33.5 bits (75), Expect(2) = 6e-09 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GP+ GPLR++ Sbjct: 52 GMAHGYFLIGPWVKLGPLRDS 72
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 44.3 bits (103), Expect(2) = 6e-09 Identities = 24/75 (32%), Positives = 35/75 (46%) Frame = -2 Query: 312 GTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXXX 133 G + I L+ + + CL YG+ SF +G S +D L+T+EGWSQ Sbjct: 78 GLISGIALILVATACLAAYGLVSFQKGGSS-------------SDPLKTSEGWSQFTAGF 124 Query: 132 XXXGVSGAVWAYFLL 88 + A A+FLL Sbjct: 125 FVGAMGSAFVAFFLL 139 Score = 33.5 bits (75), Expect(2) = 6e-09 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GP+ GPLR++ Sbjct: 51 GMAHGYFLIGPWVKLGPLRDS 71
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 38.9 bits (89), Expect(2) = 2e-08 Identities = 20/56 (35%), Positives = 33/56 (58%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQ 148 +G L IGL+ IL++ LT+YGVA+F +G+ + + ++ LQT + W Q Sbjct: 77 SGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQTKKAWDQ 121 Score = 37.4 bits (85), Expect(2) = 2e-08 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 GLAHGY L+GPF GPLRN+ Sbjct: 51 GLAHGYFLMGPFVKLGPLRNS 71
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 38.5 bits (88), Expect(2) = 5e-07 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G A GYLL GP+A+TGPLRNT Sbjct: 84 GAAFGYLLYGPYAMTGPLRNT 104 Score = 32.7 bits (73), Expect(2) = 5e-07 Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLT---LTGRKKEADKLQTAEGWSQX 145 AG LG IG V IL+ L +Y P AP + T AD L T GW+ Sbjct: 110 AGLLGTIGAVHILTALLVLYNA-------PGKAPNIQPSDCTINNPPAD-LFTRSGWADF 161 Query: 144 XXXXXXXGVSGAVWAYFLLYVLDL 73 G GAV+A+ L L L Sbjct: 162 TSGFWLGGCGGAVFAWLLCGTLHL 185
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 42.0 bits (97), Expect(2) = 4e-06 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -1 Query: 394 GLAHGYLLVGPFALTGPLRNT 332 G+AHGY L+GPFAL GPLRNT Sbjct: 51 GMAHGYWLIGPFALLGPLRNT 71 Score = 26.2 bits (56), Expect(2) = 4e-06 Identities = 24/81 (29%), Positives = 37/81 (45%) Frame = -2 Query: 315 AGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQXXXX 136 AG + IGL+ I ++ L+ G AS E P+ E D+ +GWS+ Sbjct: 77 AGLVSTIGLLLISTIGLS--GYASLVEDVPT------------EFDR----KGWSRLAGG 118 Query: 135 XXXXGVSGAVWAYFLLYVLDL 73 GV GA++A+ +L L Sbjct: 119 FLVGGVGGAIFAFAILQFFPL 139
>CLC14_MOUSE (Q8VCP9) C-type lectin domain family 14 member A precursor| Length = 459 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%) Frame = +2 Query: 143 VNCDHPSAVWSLSASFLRPVRVSTGAVDGSPSLKEATPYM-----VRQT-LRMETSP--- 295 V C P + + SF P R+S+ A+D SP E + V T ++ ETS Sbjct: 177 VLCPAPRPGAASNLSFQAPFRLSSSALDFSPPGTEVSAMCPGDLSVSSTCIQEETSAHWD 236 Query: 296 -MAPSVPACPCTGR 334 + P CPC+GR Sbjct: 237 GLFPGTVLCPCSGR 250
>HDAC4_HUMAN (P56524) Histone deacetylase 4 (HD4)| Length = 1084 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +2 Query: 194 RPVRVSTGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGRVAERASEREGA 367 RP+ V+ A +P ++P ++ E +AP+VP+ P +A R REG+ Sbjct: 283 RPLDVTDSACSSAPGSGPSSPNNSSGSVSAENG-IAPAVPSIPAETSLAHRLVAREGS 339
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/73 (23%), Positives = 33/73 (45%) Frame = +2 Query: 158 PSAVWSLSASFLRPVRVSTGAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGRV 337 PS + S+ ++ + + V+ P ++E + +P A S A P G+ Sbjct: 233 PSVIHSVVNAYKKVLAVAIETEISWPEIEELKDRIANPEAYASAAPAA-STEAAPAAGKA 291 Query: 338 AERASEREGADEE 376 E+ E+E +DE+ Sbjct: 292 EEKEEEKEESDED 304
>LRIG1_HUMAN (Q96JA1) Leucine-rich repeats and immunoglobulin-like domains| protein 1 precursor (LIG-1) Length = 1093 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +2 Query: 194 RPVRVSTGAVDGSPSLKEATPYMVR-QTLRMETSPMAPSVPACPCTG 331 RPVR GA SP L +VR + + P AP AC C G Sbjct: 3 RPVRGGLGAPRRSPCLLLLWLVLVRLEPVTAAAGPRAPCAAACTCAG 49
>SOP2_CAEEL (Q965H3) Polycomb protein sop-2 (Suppressor of pal-1 protein 2)| Length = 735 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 215 GAVDGSPSLKEATPYMVRQTLRMETSPMAPSVPACPCTGRVAERA 349 GA G+PS + A V + +PMAP+ PA P T A A Sbjct: 245 GAARGAPSRRPAPAAEVAPETPV-AAPMAPAAPAAPATPEAAPAA 288
>P2RX2_CAVPO (O70397) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 474 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 327 VHGQAGTLGAIGLVSILSVCLTMYGVASF 241 VHGQAG I + L+ LT GV SF Sbjct: 325 VHGQAGKFSLIPTIINLATALTSIGVGSF 353
>P2RX2_RAT (P49653) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 472 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 327 VHGQAGTLGAIGLVSILSVCLTMYGVASF 241 VHGQAG I + L+ LT GV SF Sbjct: 318 VHGQAGKFSLIPTIINLATALTSIGVGSF 346
>P2RX2_HUMAN (Q9UBL9) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 471 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -2 Query: 327 VHGQAGTLGAIGLVSILSVCLTMYGVASF 241 VHGQAG I + L+ LT GV SF Sbjct: 329 VHGQAGKFSLIPTIINLATALTSVGVGSF 357
>E41L1_MOUSE (Q9Z2H5) Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)| Length = 879 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +2 Query: 236 SLKEATPYMVRQTLRMETSPMAPSVPACPCTGRVAERASER----EGADEEV 379 +LKE ++ + + PS PA P E+ASER EG++E+V Sbjct: 517 TLKEPNSKLIHRDRDWDRERRLPSSPASPSPKGTPEKASERAGLREGSEEKV 568
>YIFB_ECOLI (P22787) Hypothetical protein yifB| Length = 516 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = -1 Query: 379 YLLVGPFALTGPLRNTPGA 323 Y LVG ALTG LR PGA Sbjct: 114 YELVGELALTGALRGVPGA 132
>YIFB_SALTY (P57015) Hypothetical protein yifB| Length = 506 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = -1 Query: 379 YLLVGPFALTGPLRNTPGA 323 Y LVG ALTG LR PGA Sbjct: 104 YELVGELALTGALRGVPGA 122
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +1 Query: 136 ASGELRPPFGGLELVGLLLASGEGEHRRGGRLA 234 A GE PP G E VGLL EG RGG A Sbjct: 661 AKGEPPPPVGPGEGVGLLGTGREGTSGRGGSRA 693
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +1 Query: 136 ASGELRPPFGGLELVGLLLASGEGEHRRGGRLA 234 A GE PP G E VGLL EG RGG A Sbjct: 694 AKGEPPPPVGPGEGVGLLGTGREGTAGRGGNRA 726
>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/33 (51%), Positives = 17/33 (51%) Frame = +1 Query: 136 ASGELRPPFGGLELVGLLLASGEGEHRRGGRLA 234 A GE PP G E VGLL EG RGG A Sbjct: 694 AKGEPPPPVGPGEGVGLLGTGREGTTGRGGSRA 726
>CDT1_HUMAN (Q9H211) DNA replication factor Cdt1 (Double parked homolog) (DUP)| Length = 546 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Frame = +2 Query: 230 SPSLKEATPYMVRQTLRME-------TSPMAPSVPACPCTGRVAERASEREG 364 +P +A P R+ LR+ ++P AP +PACP G+ ++++ G Sbjct: 56 APGRDQARP-PARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAG 106
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = -2 Query: 327 VHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWS 151 V GQA T GL+ +T+ V F E EP T + T+ + L EG++ Sbjct: 3848 VDGQARTQKLQGLIPGARYEVTVVSVRGFEESEPLTGFLTTVPDGPTQLRALNLTEGFA 3906 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,251,060 Number of Sequences: 219361 Number of extensions: 579308 Number of successful extensions: 1777 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 1714 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1765 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
