Clone Name | rbah61e15 |
---|---|
Clone Library Name | barley_pub |
>ZN514_HUMAN (Q96K75) Zinc finger protein 514| Length = 400 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Frame = +2 Query: 155 HLKYKKYSCXKPFLTILQIS---------TDRPPFKIQKTDRQEASTSKLWLFFKFHTIN 307 H K Y C + T Q S T P+K K R + +S L ++FHT Sbjct: 310 HTGEKPYECRECGRTFSQSSSLIVHYRFHTGEKPYKCNKCGRAFSQSSSLTQHYRFHTGE 369 Query: 308 XKEQIXGCLRSIXH 349 + C R+ H Sbjct: 370 KPYKCNECGRAFAH 383
>TGB2_PVXHB (Q07633) TGB2 protein (Triple gene block 2 protein) (TGBp2) (12 kDa| protein) (ORF 3 protein) Length = 115 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/21 (57%), Positives = 17/21 (80%) Frame = +1 Query: 184 EAVLNNSPNFNRQTAL*NSKD 246 +A+L NSPNF +T+L NSK+ Sbjct: 60 KAILYNSPNFGSRTSLNNSKN 80
>CUT1_SCHPO (P18296) Separin (EC 3.4.22.49) (Separase) (Cell untimely torn| protein 1) Length = 1828 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 118 LVSCXFFFSEGRRTIGFILEGHIICTRCYSY 26 LV S+ T+GF + H+ T+CYSY Sbjct: 836 LVIIGTLLSDKYMTLGFSGKAHLFYTKCYSY 866
>RS13_MESFL (Q6F1W9) 30S ribosomal protein S13| Length = 121 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +2 Query: 200 ILQISTDRPPFKIQKTDRQEASTSKLWLFFKFHTINXKEQIX-GCLRSIXHRKMQPVEG 373 I IST+ FK++ R+E S +N K + GC R + HRK PV G Sbjct: 53 IKAISTEISNFKVEGELRREVS------------LNIKRLMEIGCYRGLRHRKGLPVRG 99
>SRX10_CAEEL (P34551) Serpentine receptor class XA 10 (Protein srxa-10)| Length = 319 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +2 Query: 188 PFLTILQISTDRPPFKIQKTDRQEASTSKLWLFFKFH 298 P LT++ ++ +R + Q ++SK+WL+ FH Sbjct: 98 PMLTLILMTINRIAVVVSMQASQLFTSSKIWLYTSFH 134
>MTB1_BREEP (P10283) Modification methylase BepI (EC 2.1.1.37)| (Cytosine-specific methyltransferase BepI) (M.BepI) Length = 403 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +2 Query: 185 KPFLTILQISTDRPPFKIQKTDRQEASTSKLWLFFK 292 KP+ T+ QI P ++ TD+ + S SK LF K Sbjct: 258 KPYATLNQILAHLPEPELASTDKSQQSYSKAKLFKK 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,740,646 Number of Sequences: 219361 Number of extensions: 708517 Number of successful extensions: 1401 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1375 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1401 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)