Clone Name | rbah61e08 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ234439.1|HVU234439 Hordeum vulgare partial mRNA; clone cMWG0725 Length = 383 Score = 712 bits (359), Expect = 0.0 Identities = 366/367 (99%), Gaps = 1/367 (0%) Strand = Plus / Minus Query: 16 caatttactcttataaaactgtaaacaacttatacacagtaggaggaaacagagtagacc 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 caatttactcttataaaactgtaaacaacttatacacagtaggaggaaacagagtagacc 308 Query: 76 aatcagtaataccaagcctagccatctaagagagggagaggcacatgatgtaataatact 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 aatcagtaataccaagcctagccatctaagagagggagaggcacatgatgtaataatact 248 Query: 136 ccgggttcaatttcctttaattaaagcttcagttgacgaaattatactcctttagcatag 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ccgggttcaatttcctttaattaaagcttcagttgacgaaattatactcctttagcatag 188 Query: 196 atgggtgtgtgaaaattaactttacatacagagagagtataatactacgcctgctctgct 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 atgggtgtgtgaaaattaactttacatacagagagagtataatactacgcctgctctgct 128 Query: 256 gtgctctgccgtgtgcccagcagcagacccaagcagggcacactgtacgtgtttgttctt 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 gtgctctgccgtgtgcccagcagcagacccaagcagggcacactgtacgtgtttgttctt 68 Query: 316 ctcctcgcga-cccccttgcttttgtgcgtggaatttgctcagattctggaggggatgag 374 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 ctcctcgcgaccccccttgcttttgtgcgtggaatttgctcagattctggaggggatgag 8 Query: 375 gggcgtg 381 ||||||| Sbjct: 7 gggcgtg 1
>ref|XM_483211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1234 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||| ||| |||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 1233 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccactccactcag 1174 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1173 ggcacccatcaattgcagctcgttgaggtggccgaggtggccgatcctgaacaccttgcc 1114 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgac 593 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 1113 ggcgaccttgttgaggccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcac 1054 Query: 594 gatctcgctgctgtcgatgtatggcggcacgacga 628 ||||||| |||||||||||| ||||||||||||| Sbjct: 1053 gatctcggcgctgtcgatgtacggcggcacgacga 1019
>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA Length = 1567 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1226 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||| ||| |||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 1225 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccactccactcag 1166 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1165 ggcacccatcaattgcagctcgttgaggtggccgaggtggccgatcctgaacaccttgcc 1106 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgac 593 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 1105 ggcgaccttgttgaggccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcac 1046 Query: 594 gatctcgctgctgtcgatgtatggcggcacgacga 628 ||||||| |||||||||||| ||||||||||||| Sbjct: 1045 gatctcggcgctgtcgatgtacggcggcacgacga 1011
>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full insert sequence Length = 1321 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1059 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1000 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||| ||| |||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 999 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccactccactcag 940 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 939 ggcacccatcaattgcagctcgttgaggtggccgaggtggccgatcctgaacaccttgcc 880 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgac 593 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 879 ggcgaccttgttgaggccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcac 820 Query: 594 gatctcgctgctgtcgatgtatggcggcacgacga 628 ||||||| |||||||||||| ||||||||||||| Sbjct: 819 gatctcggcgctgtcgatgtacggcggcacgacga 785
>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full insert sequence Length = 1507 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1293 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1234 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||| ||| |||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 1233 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccactccactcag 1174 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1173 ggcacccatcaattgcagctcgttgaggtggccgaggtggccgatcctgaacaccttgcc 1114 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgac 593 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 1113 ggcgaccttgttgaggccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcac 1054 Query: 594 gatctcgctgctgtcgatgtatggcggcacgacga 628 ||||||| |||||||||||| ||||||||||||| Sbjct: 1053 gatctcggcgctgtcgatgtacggcggcacgacga 1019
>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full insert sequence Length = 1567 Score = 331 bits (167), Expect = 2e-87 Identities = 248/275 (90%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1285 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 1226 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||| ||| |||||||||||||| |||||||||||||||||||||||||| || | || Sbjct: 1225 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccactccactcag 1166 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 | ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1165 ggcacccatcaattgcagctcgttgaggtggccgaggtggccgatcctgaacaccttgcc 1106 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttgac 593 ||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 1105 ggcgaccttgttgaggccgaggccgaggctgaggttgtaccgcttccaggcgtgcttcac 1046 Query: 594 gatctcgctgctgtcgatgtatggcggcacgacga 628 ||||||| |||||||||||| ||||||||||||| Sbjct: 1045 gatctcggcgctgtcgatgtacggcggcacgacga 1011
>gb|AY107617.1| Zea mays PCO084394 mRNA sequence Length = 1016 Score = 276 bits (139), Expect = 8e-71 Identities = 241/275 (87%) Strand = Plus / Minus Query: 353 ctcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgcca 412 ||||||| || || |||||||| |||||||| || || ||||||||||||||||| |||| Sbjct: 766 ctcagatcctagatgggatgagcggcgtggagtttgacaggtacgccgccgcggctgcca 707 Query: 413 cgccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccga 472 ||||||| || || ||||| |||||||| | |||||||||||||||||||| |||| | Sbjct: 706 cgccgctacctagtttcactgggtaccccacatccttgagcaccatctccacaccgctca 647 Query: 473 ggcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgc 532 | || ||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 646 gacatcccagaagttgcagctcgttgaggttgccgagatggccgatcctgaagaccttcc 587 Query: 533 cggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgcgtgcttga 592 ||||||| |||||||| ||||| ||||| |||||||||||||||||||| |||||| ||| Sbjct: 586 cggcgactttgttgaggccgaggccgagactgaggttgtaccgcttccacgcgtgcctga 527 Query: 593 cgatctcgctgctgtcgatgtatggcggcacgacg 627 ||| |||| ||||||||||| |||||||||||| Sbjct: 526 cgacctcggcgctgtcgatgttgggcggcacgacg 492 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 202 gtgtgaaaattaactttacatacagagagagta 234 |||||||| |||||||||||| | ||||||||| Sbjct: 879 gtgtgaaatttaactttacattctgagagagta 847
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 208 bits (105), Expect = 2e-50 Identities = 129/137 (94%) Strand = Plus / Plus Query: 492 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 551 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 24821413 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 24821472 Query: 552 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 611 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 24821473 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 24821532 Query: 612 gtatggcggcacgacga 628 ||| ||||||||||||| Sbjct: 24821533 gtacggcggcacgacga 24821549 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 24821183 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 24821242 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 464 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 24821243 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 24821293 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 4755695 acgccgccgccgccgccacgccgc 4755718
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 208 bits (105), Expect = 2e-50 Identities = 129/137 (94%) Strand = Plus / Plus Query: 492 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 551 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 122214 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 122273 Query: 552 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 611 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 122274 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 122333 Query: 612 gtatggcggcacgacga 628 ||| ||||||||||||| Sbjct: 122334 gtacggcggcacgacga 122350 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 121984 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 122043 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 464 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 122044 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 122094
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 208 bits (105), Expect = 2e-50 Identities = 129/137 (94%) Strand = Plus / Plus Query: 492 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 551 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 25859 ctcgttgaggtggccgaggtggccgatcctgaacaccttgccggcgaccttgttgaggcc 25918 Query: 552 gagcccgaggctgaggttgtaccgcttccatgcgtgcttgacgatctcgctgctgtcgat 611 ||| |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 25919 gaggccgaggctgaggttgtaccgcttccaggcgtgcttcacgatctcggcgctgtcgat 25978 Query: 612 gtatggcggcacgacga 628 ||| ||||||||||||| Sbjct: 25979 gtacggcggcacgacga 25995 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||| |||||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 25629 tcagatcctggacgggatgagcggcgtcgaattcgacaggtacgccgccgccgccgccac 25688 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccac 464 |||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 25689 gccggagccgagcttcaccgggtagccgatgtccttgagcaccatctccac 25739
>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA, complete cds Length = 1378 Score = 101 bits (51), Expect = 3e-18 Identities = 186/231 (80%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||||||||||||||| || || ||| ||||||||||| |||||||| Sbjct: 1241 tcagatcctggaggggatgaggggggtattgttgaggagatacgccgccgctgccgccac 1182 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||||||| |||||| |||||||||| | |||| | | |||||||||||| |||| || Sbjct: 1181 cccgctgcctagcttcgccgggtaccccacgtcccttaacaccatctccacgccgctcag 1122 Query: 474 gcaacccagaagttgcagctcgttgaggtggccgaggtggccgatcctgaagaccttgcc 533 ||| |||| |||||||||||||||| || ||||| || || || ||||| ||||| || Sbjct: 1121 gcaccccaacagttgcagctcgttgacgttaccgagatgccctattctgaacacctttcc 1062 Query: 534 ggcgaccttgttgagcccgagcccgaggctgaggttgtaccgcttccatgc 584 || |||||||| ||||| | || | ||| |||||| | ||||||||||| Sbjct: 1061 agctaccttgttcagccccaagcccaagctcaggttgaagcgcttccatgc 1011
>gb|AY053359.1| Spirodela polyrhiza serine-glyoxylate aminotransferase (SGAT) mRNA, partial cds Length = 320 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 354 tcagattctggaggggatgaggggcgtggaattcgagaggtacgccgccgcggccgccac 413 |||||| ||||||||||||||||| || || ||| ||||||||||| |||||||| Sbjct: 183 tcagatcctggaggggatgaggggggtattgttgaggagatacgccgccgctgccgccac 124 Query: 414 gccgctgccaagcttcaccgggtacccgatgtccttgagcaccatctccaccccgccgag 473 |||||||| ||||||||||||||||| | |||| | | |||||||||||| |||| || Sbjct: 123 cccgctgcctagcttcaccgggtaccccacgtcccttaacaccatctccacgccgctcag 64 Query: 474 gcaacccagaagttgcagctcgttga 499 ||| |||| |||||||||||||||| Sbjct: 63 gcaccccaacagttgcagctcgttga 38
>dbj|D86125.1| Hyphomicrobium methylovorum DNA for serine-glyoxylate aminotransferase, complete cds Length = 2303 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 504 gccgaggtggccgatcctgaagaccttgccggcgaccttgttgagcccgagcccga 559 ||||||||||||||| | |||||| |||||||||||||||||||| ||||| |||| Sbjct: 1957 gccgaggtggccgatgcggaagactttgccggcgaccttgttgaggccgagaccga 1902
>gb|AE007302.1| Sinorhizobium meliloti 1021 plasmid pSymA section 108 of 121 of the complete plasmid sequence Length = 10507 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 492 ctcgttgaggtggccgaggtggccgatcctgaagaccttgccggcgaccttgttgagccc 551 |||||| |||| ||||||||||||||||||||| ||| ||| || |||||| ||||||| Sbjct: 4606 ctcgttcaggtcgccgaggtggccgatcctgaaaacccggcccgccaccttgctgagccc 4665
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 597 ctcgctgctgtcgatgtatggc 618 |||||||||||||||||||||| Sbjct: 1677290 ctcgctgctgtcgatgtatggc 1677311
>gb|AC018478.4| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACH57F14, complete sequence Length = 103809 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ctcttataaaactgtaaacaacttat 48 ||||||||||| |||||||||||||| Sbjct: 96316 ctcttataaaaatgtaaacaacttat 96341
>gb|AC010668.7| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR44L03, complete sequence Length = 172190 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ctcttataaaactgtaaacaacttat 48 ||||||||||| |||||||||||||| Sbjct: 36106 ctcttataaaaatgtaaacaacttat 36131
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 23 ctcttataaaactgtaaacaacttat 48 ||||||||||| |||||||||||||| Sbjct: 82435 ctcttataaaaatgtaaacaacttat 82460
>gb|AF039000.1|AF039000 Fritillaria agrestis putative serine-glyoxylate aminotransferase (SGA) mRNA, complete cds Length = 1487 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 445 tccttgagcaccatctccaccccgccgaggcaacccagaagttgcagctc 494 |||||||| ||||||||||| || | ||||||||||| | ||||||||| Sbjct: 1233 tccttgagtaccatctccacaccactcaggcaacccagcaattgcagctc 1184
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgcc 416 |||||||||||||||||||||| Sbjct: 4363069 acgccgccgcggccgccacgcc 4363090
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgcc 416 |||||||||||||||||||||| Sbjct: 4295847 acgccgccgcggccgccacgcc 4295868
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ccgccgcggccgccacgccgc 418 ||||||||||||||||||||| Sbjct: 248577 ccgccgcggccgccacgccgc 248557
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgc 415 ||||||||||||||||||||| Sbjct: 34756737 acgccgccgcggccgccacgc 34756757
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acgccgccgcggccgccacgc 415 ||||||||||||||||||||| Sbjct: 105913 acgccgccgcggccgccacgc 105893
>ref|XM_842631.1| Leishmania major strain Friedlin flagellar radial spoke protein (LMJ_0701) partial mRNA Length = 1773 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 ccgccgcggccgccacgccgc 418 ||||||||||||||||||||| Sbjct: 277 ccgccgcggccgccacgccgc 297
>emb|CR753814.7| Zebrafish DNA sequence from clone CH211-195C14 in linkage group 9, complete sequence Length = 38046 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 taaaactgtaaacaacttata 49 ||||||||||||||||||||| Sbjct: 11520 taaaactgtaaacaacttata 11500
>ref|XM_502224.1| Yarrowia lipolytica CLIB122, YALI0C24398g predicted mRNA Length = 798 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 agcccgagcccgaggctgagg 567 ||||||||||||||||||||| Sbjct: 593 agcccgagcccgaggctgagg 613
>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13 Contains the C1QA gene for complement component 1( q subcomponent, alpha polypeptide), the C1QG gene for complement component 1 (q subcomponent, gamma polypeptide), the C1QB gene for complement component 1 (q subcomponent, beta polypeptide), the 5' end of the EPHB2 gene for EphB2 and a CpG island, complete sequence Length = 87320 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gcctgctctgctgtgctctgc 264 ||||||||||||||||||||| Sbjct: 53126 gcctgctctgctgtgctctgc 53106
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gggttcaatttcctttaatta 158 ||||||||||||||||||||| Sbjct: 3697319 gggttcaatttcctttaatta 3697299
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccgat 518 ||||||||||||||||||||| Sbjct: 3036008 gaggtggccgaggtggccgat 3035988 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 3036044 gaggtggccgaggtggccga 3036025 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 3036035 gaggtggccgaggtggccga 3036016 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 3036026 gaggtggccgaggtggccga 3036007 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 3036017 gaggtggccgaggtggccga 3035998
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 gcttgacgatctcgctgctgtcgat 611 |||||||||||||||||| |||||| Sbjct: 80887 gcttgacgatctcgctgccgtcgat 80911
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgc 415 ||||||||||||||||||||| Sbjct: 34846809 acgccgccgcggccgccacgc 34846829
>emb|AL928703.9| Mouse DNA sequence from clone RP23-308K19 on chromosome 2, complete sequence Length = 109891 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ttactcttataaaactgtaaa 40 ||||||||||||||||||||| Sbjct: 53004 ttactcttataaaactgtaaa 53024
>dbj|AP001547.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802F5, complete sequence Length = 144493 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gcctgctctgctgtgctctgc 264 ||||||||||||||||||||| Sbjct: 115464 gcctgctctgctgtgctctgc 115484
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 acgccgccgcggccgccacgc 415 ||||||||||||||||||||| Sbjct: 3418066 acgccgccgcggccgccacgc 3418046
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 atttcctttaattaaagcttc 165 ||||||||||||||||||||| Sbjct: 865083 atttcctttaattaaagcttc 865063
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 agcccgagcccgaggctgagg 567 ||||||||||||||||||||| Sbjct: 3252873 agcccgagcccgaggctgagg 3252853
>dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-286N3, complete sequence Length = 213005 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 aagagagggagaggcacatga 123 ||||||||||||||||||||| Sbjct: 210357 aagagagggagaggcacatga 210377
>dbj|AP001032.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874N19, complete sequence Length = 165113 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 aagagagggagaggcacatga 123 ||||||||||||||||||||| Sbjct: 93069 aagagagggagaggcacatga 93089
>gb|AC146948.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0782F03 map near S2137, complete sequence Length = 197516 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 175326 acgccgccgccgccgccacgccgc 175303
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgc 415 |||||||||||||||||||| Sbjct: 3198014 cgccgccgcggccgccacgc 3198033
>ref|XM_364410.1| Magnaporthe grisea 70-15 hypothetical protein (MG09255.4) partial mRNA Length = 4989 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gagcccgagcccgaggctga 565 |||||||||||||||||||| Sbjct: 4123 gagcccgagcccgaggctga 4142
>gb|AC107685.7| Mus musculus chromosome 19, clone RP24-376I6, complete sequence Length = 175566 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcctgctctgctgtgctctg 263 |||||||||||||||||||| Sbjct: 7163 gcctgctctgctgtgctctg 7144
>ref|XM_865675.1| PREDICTED: Bos taurus similar to Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4), transcript variant 1 (LOC613955), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 gcggccgccacgccgctgcc 422 |||||||||||||||||||| Sbjct: 110 gcggccgccacgccgctgcc 129
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 cgccgccgcggccgccacgc 415 |||||||||||||||||||| Sbjct: 783136 cgccgccgcggccgccacgc 783117
>gb|AC148021.2| Mus musculus BAC clone RP23-9A7 from chromosome 19, complete sequence Length = 213178 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gcctgctctgctgtgctctg 263 |||||||||||||||||||| Sbjct: 6242 gcctgctctgctgtgctctg 6261
>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence Length = 171912 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 288 gcagggcacactgtacgtgtttgttctt 315 ||||| ||||||||| |||||||||||| Sbjct: 106185 gcaggacacactgtaggtgtttgttctt 106158
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ggtggccgaggtggccgatc 519 |||||||||||||||||||| Sbjct: 1519686 ggtggccgaggtggccgatc 1519705
>gb|AC140378.2| Mus musculus BAC clone RP24-84M18 from chromosome 19, complete sequence Length = 194681 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 gcctgctctgctgtgctctg 263 |||||||||||||||||||| Sbjct: 74034 gcctgctctgctgtgctctg 74015
>gb|AC124517.4| Mus musculus BAC clone RP23-387K15 from chromosome 13, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cctgctctgctgtgctctgc 264 |||||||||||||||||||| Sbjct: 75886 cctgctctgctgtgctctgc 75905
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 tctggaggggatgaggggcgtgga 383 ||||||||||||| |||||||||| Sbjct: 114645 tctggaggggatggggggcgtgga 114622
>gb|AC009449.7| Homo sapiens chromosome 17, clone CTD-2291H15, complete sequence Length = 103577 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 18589 tactcttataaaactgtaaa 18570
>gb|AC103810.5| Homo sapiens chromosome 17, clone RP11-927P21, complete sequence Length = 203192 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 82495 tactcttataaaactgtaaa 82476
>gb|AC006365.3| Homo sapiens BAC clone GS1-587J1 from 7, complete sequence Length = 98433 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aagagagggagaggcacatg 122 |||||||||||||||||||| Sbjct: 84768 aagagagggagaggcacatg 84749
>ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily C, member 1, transcript variant 1 (LOC607587), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 326 gaggtggccgaggtggccga 307
>gb|AC160107.2| Mus musculus BAC clone RP24-252N17 from chromosome 13, complete sequence Length = 178725 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cctgctctgctgtgctctgc 264 |||||||||||||||||||| Sbjct: 6551 cctgctctgctgtgctctgc 6532
>gb|AC162933.2| Mus musculus BAC clone RP23-148J22 from chromosome 12, complete sequence Length = 236972 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aaagcttcagttgacgaaat 177 |||||||||||||||||||| Sbjct: 142993 aaagcttcagttgacgaaat 142974 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aaagcttcagttgacgaaat 177 |||||||||||||||||||| Sbjct: 141428 aaagcttcagttgacgaaat 141409
>emb|BX928753.10| Zebrafish DNA sequence from clone DKEY-5J3 in linkage group 17, complete sequence Length = 159225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tgtgaaaattaactttacat 222 |||||||||||||||||||| Sbjct: 101036 tgtgaaaattaactttacat 101055
>gb|AC127025.7| Homo sapiens chromosome 17, clone CTD-2646J6, complete sequence Length = 141061 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 51275 tactcttataaaactgtaaa 51256
>gb|BT009343.1| Triticum aestivum clone wlm4.pk0021.h10:fis, full insert mRNA sequence Length = 1639 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacg 414 |||||||||||||||||||| Sbjct: 458 acgccgccgcggccgccacg 477
>emb|BX571872.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 14/17 Length = 348498 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 aaaattaactttacatacag 226 |||||||||||||||||||| Sbjct: 280903 aaaattaactttacatacag 280922
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gaggtggccgaggtggccga 517 |||||||||||||||||||| Sbjct: 219949 gaggtggccgaggtggccga 219968
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 589 ttgacgatctcgctgctgtcgatg 612 ||||||||||||| |||||||||| Sbjct: 418774 ttgacgatctcgccgctgtcgatg 418751
>emb|AL355532.10| Human DNA sequence from clone RP11-487F5 on chromosome 6 Contains the 3' part of the GRIK2 (glutamate receptor, ionotropic, kainate 2) gene, ESTs, STSs and GSSs, complete sequence Length = 181302 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tgcccagcagcagacccaagcagg 292 ||||||| |||||||||||||||| Sbjct: 29784 tgcccagaagcagacccaagcagg 29807
>emb|BX927328.10| Zebrafish DNA sequence from clone CH211-10M4 in linkage group 17, complete sequence Length = 197949 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tgtgaaaattaactttacat 222 |||||||||||||||||||| Sbjct: 30137 tgtgaaaattaactttacat 30156
>gb|AC068152.11| Homo sapiens chromosome 17, clone RP11-156P1, complete sequence Length = 73947 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 63631 tactcttataaaactgtaaa 63650
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence Length = 198470 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 136303 tactcttataaaactgtaaa 136284
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gagcccgagcccgaggctga 565 |||||||||||||||||||| Sbjct: 1928458 gagcccgagcccgaggctga 1928477
>dbj|AK172163.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830050M23 product:synaptopodin, full insert sequence Length = 4971 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 tatacacagtaggaggaaacagag 69 ||||||||||| |||||||||||| Sbjct: 2 tatacacagtaagaggaaacagag 25
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgccgct 419 ||||||||| |||||||||||||| Sbjct: 19481570 cgccgccgccgccgccacgccgct 19481593
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 8094707 acgccgccgccgccgccacgccgc 8094684
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 10827636 acgccgccgccgccgccacgccgc 10827659
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 9795031 acgccgccgccgccgccacgccgc 9795054
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence Length = 226696 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 161965 tactcttataaaactgtaaa 161984
>ref|XM_623549.1| PREDICTED: Apis mellifera similar to glucosephosphate isomerase (LOC551154), mRNA Length = 1754 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 tttcctttaattaaagcttcagtt 169 |||||||| ||||||||||||||| Sbjct: 1408 tttcctttcattaaagcttcagtt 1385
>gb|AC067738.17| Homo sapiens 3 BAC RP11-381H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82883 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 agacccaagcagggcacactgtac 303 |||||||||||| ||||||||||| Sbjct: 20379 agacccaagcagtgcacactgtac 20356
>gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complete sequence Length = 202827 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atacacagtaggaggaaaca 66 |||||||||||||||||||| Sbjct: 62010 atacacagtaggaggaaaca 62029
>gb|AC139677.4| Homo sapiens chromosome 17, clone RP11-1070B7, complete sequence Length = 179564 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 5322 tactcttataaaactgtaaa 5341
>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence Length = 200420 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 86286 tactcttataaaactgtaaa 86267
>gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, complete sequence Length = 183093 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 101477 tactcttataaaactgtaaa 101458
>gb|AC090616.12| Homo sapiens chromosome 17, clone RP11-640N20, complete sequence Length = 192070 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 127264 tactcttataaaactgtaaa 127245
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 85273 acgccgccgccgccgccacgccgc 85296
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ccgcggccgccacgccgctg 420 |||||||||||||||||||| Sbjct: 610583 ccgcggccgccacgccgctg 610602
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0018O23 Length = 142143 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 38395 acgccgccgccgccgccacgccgc 38418
>dbj|AP005766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0028O21 Length = 134543 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 4011 acgccgccgccgccgccacgccgc 4034
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0455A11 Length = 158629 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 113711 acgccgccgccgccgccacgccgc 113734
>dbj|AK099684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072A20, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgccgct 419 ||||||||| |||||||||||||| Sbjct: 73 cgccgccgccgccgccacgccgct 96
>emb|CT025545.28| Mouse DNA sequence from clone RP24-88C18 on chromosome 12, complete sequence Length = 266295 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aaagcttcagttgacgaaat 177 |||||||||||||||||||| Sbjct: 67215 aaagcttcagttgacgaaat 67234 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aaagcttcagttgacgaaat 177 |||||||||||||||||||| Sbjct: 65650 aaagcttcagttgacgaaat 65669
>emb|BX284620.5| Zebrafish DNA sequence from clone CH211-218E20 in linkage group 20, complete sequence Length = 201942 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 ttataaaactgtaaacaacttata 49 |||||||| ||||||||||||||| Sbjct: 5082 ttataaaaatgtaaacaacttata 5059
>gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.271_K_11, complete sequence Length = 199182 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 105267 tactcttataaaactgtaaa 105248 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tactcttataaaactgtaaa 40 |||||||||||||||||||| Sbjct: 92252 tactcttataaaactgtaaa 92271
>dbj|AP006198.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-410D4, complete sequence Length = 139671 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tgcccagcagcagacccaagcagg 292 ||||||| |||||||||||||||| Sbjct: 66739 tgcccagaagcagacccaagcagg 66762
>emb|CT573017.5| Mouse DNA sequence from clone RP24-309J23 on chromosome 17, complete sequence Length = 157643 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gtaggaggaaacagagtaga 73 |||||||||||||||||||| Sbjct: 37788 gtaggaggaaacagagtaga 37769
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 agttgcagctcgttgaggtggccg 507 ||||||||||||||||||| |||| Sbjct: 594728 agttgcagctcgttgaggtcgccg 594751
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 acgccgccgcggccgccacgccgc 418 |||||||||| ||||||||||||| Sbjct: 8164537 acgccgccgccgccgccacgccgc 8164514
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgccgct 419 ||||||||| |||||||||||||| Sbjct: 19407783 cgccgccgccgccgccacgccgct 19407806
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 tccatgcgtgcttgacgatc 597 |||||||||||||||||||| Sbjct: 230822 tccatgcgtgcttgacgatc 230803
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgccgct 419 ||||||||| |||||||||||||| Sbjct: 159264 cgccgccgccgccgccacgccgct 159287
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgccgccgcggccgccacgccgct 419 ||||||||| |||||||||||||| Sbjct: 13751 cgccgccgccgccgccacgccgct 13774
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ccgccgcggccgccacgccg 417 |||||||||||||||||||| Sbjct: 2677509 ccgccgcggccgccacgccg 2677528
>dbj|AP002530.2| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 3/4 Length = 300000 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tgcccagcagcagacccaagcagg 292 ||||||| |||||||||||||||| Sbjct: 152035 tgcccagaagcagacccaagcagg 152058
>dbj|AB042030.1| Homo sapiens genomic DNA, chromosome 6q21, BAC clone:610J6, complete sequence Length = 111927 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tgcccagcagcagacccaagcagg 292 ||||||| |||||||||||||||| Sbjct: 87059 tgcccagaagcagacccaagcagg 87082 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,840,000 Number of Sequences: 3902068 Number of extensions: 5840000 Number of successful extensions: 144866 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 142623 Number of HSP's gapped (non-prelim): 2237 length of query: 628 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 605 effective length of database: 17,143,297,704 effective search space: 10371695110920 effective search space used: 10371695110920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)