ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast ... 47 1e-05
2ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast ... 35 0.062
3ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast ... 34 0.11
4STHA_SALTY (P66008) Soluble pyridine nucleotide transhydrogenase... 31 0.68
5STHA_SALTI (P66009) Soluble pyridine nucleotide transhydrogenase... 31 0.68
6NRCAM_RAT (P97686) Neuronal cell adhesion molecule precursor (Nr... 29 3.4
7NRCAM_MOUSE (Q810U4) Neuronal cell adhesion molecule precursor (... 29 3.4
8ALFD_PEA (Q01517) Fructose-bisphosphate aldolase 2, chloroplast ... 28 4.4
9G6PI_GEOSL (Q74DK5) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... 28 7.5
10PA2GA_HUMAN (P14555) Phospholipase A2, membrane associated precu... 28 7.5

>ALFC_ORYSA (Q40677) Fructose-bisphosphate aldolase, chloroplast precursor (EC|
           4.1.2.13) (ALDP)
          Length = 388

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = -3

Query: 318 AQLGKYTSDGEAAEAKEGMFVK 253
           AQLGKYTSDGEAAEAKEGMFVK
Sbjct: 363 AQLGKYTSDGEAAEAKEGMFVK 384



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>ALFC_SPIOL (P16096) Fructose-bisphosphate aldolase, chloroplast precursor (EC|
           4.1.2.13)
          Length = 394

 Score = 34.7 bits (78), Expect = 0.062
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -3

Query: 318 AQLGKYTSDGEAAEAKEGMFVK 253
           AQLGKYT +GE+ E K+ MFVK
Sbjct: 368 AQLGKYTGEGESEERKKDMFVK 389



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>ALFC_PEA (Q01516) Fructose-bisphosphate aldolase 1, chloroplast precursor|
           (EC 4.1.2.13) (Fragment)
          Length = 356

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -3

Query: 318 AQLGKYTSDGEAAEAKEGMFVK 253
           AQLGKY  DGE+ EAK+ +FVK
Sbjct: 331 AQLGKYYGDGESEEAKKELFVK 352



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>STHA_SALTY (P66008) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 465

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 22/83 (26%), Positives = 35/83 (42%)
 Frame = +3

Query: 6   CKILQXXCKSMDTHVKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYDA 185
           C+ILQ     +D H  +ALE   GTV+ ++  K      SR Y  + + F  P     D+
Sbjct: 109 CEILQGNAHFIDEHT-LALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHPRIYDSDS 167

Query: 186 SFCLVRNVRSSVDWNGSINSCSF 254
              L    R  + +   +  C +
Sbjct: 168 ILSLHHEPRHVIIYGAGVIGCEY 190



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>STHA_SALTI (P66009) Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)|
           (STH) (NAD(P)(+) transhydrogenase [B-specific])
          Length = 465

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 22/83 (26%), Positives = 35/83 (42%)
 Frame = +3

Query: 6   CKILQXXCKSMDTHVKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYDA 185
           C+ILQ     +D H  +ALE   GTV+ ++  K      SR Y  + + F  P     D+
Sbjct: 109 CEILQGNAHFIDEHT-LALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHPRIYDSDS 167

Query: 186 SFCLVRNVRSSVDWNGSINSCSF 254
              L    R  + +   +  C +
Sbjct: 168 ILSLHHEPRHVIIYGAGVIGCEY 190



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>NRCAM_RAT (P97686) Neuronal cell adhesion molecule precursor (Nr-CAM)|
           (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
           (rBravo) (Ankyrin-binding cell adhesion molecule NrCAM)
          Length = 1214

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 48  VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYDASFCLVR 203
           + VA + STGT  C++R KL   K     +  HL  + P R I    + +V+
Sbjct: 512 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRFIKQPGYAVVQ 558



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>NRCAM_MOUSE (Q810U4) Neuronal cell adhesion molecule precursor (Nr-CAM)|
           (NgCAM-related cell adhesion molecule) (Ng-CAM-related)
           (mBravo)
          Length = 1256

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 48  VKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLPARSIYDASFCLVR 203
           + VA + STGT  C++R KL   K     +  HL  + P R I    + +V+
Sbjct: 506 IPVAQKDSTGTYTCVARNKLGMAK-----NEVHLEIKDPTRIIKQPEYAVVQ 552



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>ALFD_PEA (Q01517) Fructose-bisphosphate aldolase 2, chloroplast (EC|
           4.1.2.13)
          Length = 349

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 318 AQLGKYTSDGEAAEAKE 268
           AQLGKY  DGE+ EAK+
Sbjct: 325 AQLGKYIGDGESEEAKK 341



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>G6PI_GEOSL (Q74DK5) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 529

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 64  NNLLEQ*SAYREAN*RVKKDLENTVIIISGSGSQLDR 174
           N +LE  +AYR A      D     + ++G+GS+LDR
Sbjct: 187 NGMLEAEAAYRRAG----LDFSRHAVAVTGAGSELDR 219



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>PA2GA_HUMAN (P14555) Phospholipase A2, membrane associated precursor (EC|
           3.1.1.4) (Phosphatidylcholine 2-acylhydrolase) (Group
           IIA phospholipase A2) (GIIC sPLA2) (Non-pancreatic
           secretory phospholipase A2) (NPS-PLA2)
          Length = 144

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +3

Query: 27  CKSMDTHVKVALE*STGTVKCISRGKLTCKKRSRKYSNHHLRFRLP 164
           C   D+      E       C +R K T  K+ + YSN H R   P
Sbjct: 97  CAKQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTP 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,859,271
Number of Sequences: 219361
Number of extensions: 410303
Number of successful extensions: 976
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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