Clone Name | rbah61e05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_193616.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 190 bits (96), Expect = 2e-45 Identities = 197/231 (85%) Strand = Plus / Minus Query: 141 cgcgtcgttaactgccttggtcatggcctcatggaacaatgcctggttccagtcgtcgtc 200 ||||||||| | ||||| ||||| ||||| |||||| | |||| |||||| || | | Sbjct: 1323 cgcgtcgttcgccgccttcgtcatcgcctcgtggaacgacgcctcgttccaatctcctcc 1264 Query: 201 catgatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtc 260 || |||| ||||||||||| |||||||||||||||| || | ||||| ||||| ||||| Sbjct: 1263 cacgatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtc 1204 Query: 261 ggcgtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggag 320 ||||| |||||||| ||||||| || | |||||||| |||||| ||||||||| |||| Sbjct: 1203 ggcgtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggag 1144 Query: 321 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371 |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1143 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 1093
>dbj|AK106333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F10, full insert sequence Length = 1990 Score = 190 bits (96), Expect = 2e-45 Identities = 197/231 (85%) Strand = Plus / Minus Query: 141 cgcgtcgttaactgccttggtcatggcctcatggaacaatgcctggttccagtcgtcgtc 200 ||||||||| | ||||| ||||| ||||| |||||| | |||| |||||| || | | Sbjct: 1444 cgcgtcgttcgccgccttcgtcatcgcctcgtggaacgacgcctcgttccaatctcctcc 1385 Query: 201 catgatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtc 260 || |||| ||||||||||| |||||||||||||||| || | ||||| ||||| ||||| Sbjct: 1384 cacgatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtc 1325 Query: 261 ggcgtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggag 320 ||||| |||||||| ||||||| || | |||||||| |||||| ||||||||| |||| Sbjct: 1324 ggcgtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggag 1265 Query: 321 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371 |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1264 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 1214
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 2e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 204 gatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtcggc 263 |||| ||||||||||| |||||||||||||||| || | ||||| ||||| |||||||| Sbjct: 22137752 gatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtcggc 22137693 Query: 264 gtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggagcac 323 || |||||||| ||||||| || | |||||||| |||||| ||||||||| ||||||| Sbjct: 22137692 gtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggagcac 22137633 Query: 324 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22137632 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 22137585
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 184 bits (93), Expect = 2e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 204 gatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtcggc 263 |||| ||||||||||| |||||||||||||||| || | ||||| ||||| |||||||| Sbjct: 33238 gatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtcggc 33179 Query: 264 gtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggagcac 323 || |||||||| ||||||| || | |||||||| |||||| ||||||||| ||||||| Sbjct: 33178 gtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggagcac 33119 Query: 324 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 33118 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 33071
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 gcaccagctccaccacgtcgcac 342 ||||||||||||||||||||||| Sbjct: 1716096 gcaccagctccaccacgtcgcac 1716074
>ref|XM_450144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1087 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gaggcactccaggatgcggagc 321 |||||||||||||||||||||| Sbjct: 289 gaggcactccaggatgcggagc 268
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 gctggcgatggccttgagcagc 240 |||||||||||||||||||||| Sbjct: 898260 gctggcgatggccttgagcagc 898239
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gaggcactccaggatgcggagc 321 |||||||||||||||||||||| Sbjct: 1995653 gaggcactccaggatgcggagc 1995632
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 cacgtcgcactccaccatcacc 354 |||||||||||||||||||||| Sbjct: 4404823 cacgtcgcactccaccatcacc 4404802
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gaggcactccaggatgcggagc 321 |||||||||||||||||||||| Sbjct: 31020 gaggcactccaggatgcggagc 30999
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 cacgtcgcactccaccatcacc 354 |||||||||||||||||||||| Sbjct: 52504 cacgtcgcactccaccatcacc 52483
>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025H18 Length = 176201 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gaggcactccaggatgcggagc 321 |||||||||||||||||||||| Sbjct: 144821 gaggcactccaggatgcggagc 144800
>dbj|AK103068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P13, full insert sequence Length = 2758 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 cacgtcgcactccaccatcacc 354 |||||||||||||||||||||| Sbjct: 585 cacgtcgcactccaccatcacc 564
>dbj|AK064651.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E09, full insert sequence Length = 1087 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gaggcactccaggatgcggagc 321 |||||||||||||||||||||| Sbjct: 289 gaggcactccaggatgcggagc 268
>dbj|AB037135.2| Oryza sativa (japonica cultivar-group) OsORC1 mRNA for origin recognition complex 1, complete cds Length = 2827 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 333 cacgtcgcactccaccatcacc 354 |||||||||||||||||||||| Sbjct: 632 cacgtcgcactccaccatcacc 611
>ref|XM_368314.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00930.4) partial mRNA Length = 3615 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 tggcgatggccttgagcagca 241 ||||||||||||||||||||| Sbjct: 3419 tggcgatggccttgagcagca 3439
>emb|AL590438.12| Human DNA sequence from clone RP11-22L13 on chromosome 1 Contains part of the PRDM16 gene for PR domain containing 16, complete sequence Length = 99477 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ccaccatcaccatcaccgtca 364 ||||||||||||||||||||| Sbjct: 50120 ccaccatcaccatcaccgtca 50100
>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 ccaccatcaccatcaccgtca 364 ||||||||||||||||||||| Sbjct: 56992 ccaccatcaccatcaccgtca 56972
>gb|AE012310.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 218 of 460 of the complete genome Length = 10787 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 gtcaggttcacaacctcgtccgatg 385 |||||||||||||||||| |||||| Sbjct: 3912 gtcaggttcacaacctcggccgatg 3936
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 361 gtcaggttcacaacctcgtccgatg 385 |||||||||||||||||| |||||| Sbjct: 2566551 gtcaggttcacaacctcggccgatg 2566527
>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence Length = 218156 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 95573 caccatcaccatcaccgtca 95554
>ref|XM_629928.1| Dictyostelium discoideum hypothetical protein (DDB0184065), partial mRNA Length = 2970 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 275 caccatcaccatcaccgtca 294
>gb|AC149762.2| Bos taurus BAC CH240-123C23 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 187366 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 50951 actccaccatcaccatcacc 50932
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 agtcgtcgtccatgatccgg 210 |||||||||||||||||||| Sbjct: 3573447 agtcgtcgtccatgatccgg 3573428
>ref|NM_028390.1| Mus musculus anillin, actin binding protein (scraps homolog, Drosophila) (Anln), mRNA Length = 4653 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 850 gcaacgatttgctcctggga 869
>ref|XM_451080.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01826g predicted mRNA Length = 4395 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 1010 caccatcaccatcaccgtca 1029
>gb|BC027141.1| Mus musculus anillin, actin binding protein (scraps homolog, Drosophila), mRNA (cDNA clone IMAGE:4947342), containing frame-shift errors Length = 1532 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 796 gcaacgatttgctcctggga 815
>gb|BT011378.1| Drosophila melanogaster LP12677 full insert cDNA Length = 920 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 caccggaggcactccaggatgcggagcaccag 326 |||||||||||||||| ||| |||||||||| Sbjct: 97 caccggaggcactccaaaatgaggagcaccag 128
>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete sequence Length = 247670 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 88491 caccatcaccatcaccgtca 88472
>gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148095 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 138771 caccatcaccatcaccgtca 138790 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 aggatgcggagcaccagctccacc 333 |||||||||||| ||||||||||| Sbjct: 130623 aggatgcggagctccagctccacc 130646
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 44181 caccatcaccatcaccgtca 44200
>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence Length = 158384 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cactccaccatcaccatcac 359 |||||||||||||||||||| Sbjct: 107462 cactccaccatcaccatcac 107481 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cactccaccatcaccatcac 359 |||||||||||||||||||| Sbjct: 93868 cactccaccatcaccatcac 93887
>emb|AL356073.15| Human DNA sequence from clone RP11-813O3 on chromosome 10, complete sequence Length = 165917 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 46643 actccaccatcaccatcacc 46662
>ref|XM_795196.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC584465 (LOC584465), mRNA Length = 219 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 111 caccatcaccatcaccgtca 130
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 166395 caccatcaccatcaccgtca 166376
>emb|BX897679.1| Neurospora crassa DNA linkage group VI BAC clone B2C22 Length = 66491 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 45927 caccatcaccatcaccgtca 45908
>gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, complete sequence Length = 199102 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 95665 caccatcaccatcaccgtca 95646
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gctggcgatggccttgagca 238 |||||||||||||||||||| Sbjct: 5342853 gctggcgatggccttgagca 5342834 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 1752684 caccatcaccatcaccgtca 1752665
>gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complete sequence Length = 152118 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 95941 actccaccatcaccatcacc 95922
>ref|NM_166460.2| Drosophila melanogaster CG30286-RA (CG30286), mRNA Length = 732 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 caccggaggcactccaggatgcggagcaccag 326 |||||||||||||||| ||| |||||||||| Sbjct: 43 caccggaggcactccaaaatgaggagcaccag 74
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 45460 caccatcaccatcaccgtca 45479
>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence Length = 210913 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 124543 gcaacgatttgctcctggga 124562
>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone BACR13H23, complete sequence Length = 179139 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 caccggaggcactccaggatgcggagcaccag 326 |||||||||||||||| ||| |||||||||| Sbjct: 153527 caccggaggcactccaaaatgaggagcaccag 153496
>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence Length = 110467 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aatgcctggttccagtcgtc 197 |||||||||||||||||||| Sbjct: 88477 aatgcctggttccagtcgtc 88458
>gb|AC151277.3| Mus musculus BAC clone RP24-170B23 from chromosome 17, complete sequence Length = 146255 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gttaactgccttggtcatgg 166 |||||||||||||||||||| Sbjct: 6199 gttaactgccttggtcatgg 6218
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gatgctggcgatggccttga 235 |||||||||||||||||||| Sbjct: 2888209 gatgctggcgatggccttga 2888190
>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence Length = 231739 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 184275 caccatcaccatcaccgtca 184256
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tggcgatggccttgagcagc 240 |||||||||||||||||||| Sbjct: 924984 tggcgatggccttgagcagc 925003
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tccaccatcaccatcaccgt 362 |||||||||||||||||||| Sbjct: 11672852 tccaccatcaccatcaccgt 11672871
>gb|AC104634.5| Homo sapiens BAC clone RP11-793L24 from 2, complete sequence Length = 115758 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 21405 caccatcaccatcaccgtca 21424
>gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, complete sequence Length = 208924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 24387 caccatcaccatcaccgtca 24406
>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete genome Length = 11746 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcgatggccttgagcagca 241 |||||||||||||||||||| Sbjct: 9054 ggcgatggccttgagcagca 9073
>ref|XM_225479.3| PREDICTED: Rattus norvegicus similar to Anillin (LOC307056), mRNA Length = 3242 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 355 gcaacgatttgctcctggga 374
>ref|XM_343362.2| PREDICTED: Rattus norvegicus similar to Anillin (LOC363031), mRNA Length = 3327 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 661 gcaacgatttgctcctggga 680
>gb|AF043438.1|AF043438 Anopheles gambiae 18a putative pupal-specific cuticular protein CP2b mRNA, complete cds Length = 798 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccacgtcgcactccaccatc 351 |||||||||||||||||||| Sbjct: 105 ccacgtcgcactccaccatc 124
>gb|AF043436.1|AF043436 Anopheles gambiae 13b putative pupal-specific cuticular protein CP2c mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccacgtcgcactccaccatc 351 |||||||||||||||||||| Sbjct: 104 ccacgtcgcactccaccatc 123
>gb|AF043435.1|AF043435 Anopheles gambiae 13a pupal-specific cuticular protein CP2b mRNA, complete cds Length = 779 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccacgtcgcactccaccatc 351 |||||||||||||||||||| Sbjct: 86 ccacgtcgcactccaccatc 105
>gb|AF043433.1|AF043433 Anopheles gambiae putative pupal-specific cuticular protein (cp2a), putative pupal-specific cuticular protein (cp2b), and putative pupal-specific cuticular protein (cp2c) genes, complete cds Length = 17406 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccacgtcgcactccaccatc 351 |||||||||||||||||||| Sbjct: 2060 ccacgtcgcactccaccatc 2079
>gb|AY142844.1| Heliobacillus mobilis Isoleucyl-tRNA synthetase gene, partial cds Length = 2262 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 cggaggcactccaggatgcggagc 321 |||||||| ||||||||||||||| Sbjct: 2099 cggaggcattccaggatgcggagc 2122
>ref|XM_319273.2| Anopheles gambiae str. PEST ENSANGP00000012316 (ENSANGG00000009827), partial mRNA Length = 681 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccacgtcgcactccaccatc 351 |||||||||||||||||||| Sbjct: 83 ccacgtcgcactccaccatc 102
>dbj|AK109076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G08, full insert sequence Length = 946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ccaccatcaccatcaccgtc 363 |||||||||||||||||||| Sbjct: 458 ccaccatcaccatcaccgtc 477
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tggcgatggccttgagcagc 240 |||||||||||||||||||| Sbjct: 838199 tggcgatggccttgagcagc 838218
>gb|BC032164.1| Mus musculus anillin, actin binding protein (scraps homolog, Drosophila), mRNA (cDNA clone MGC:38439 IMAGE:5346703), complete cds Length = 4653 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcaacgatttgctcctggga 73 |||||||||||||||||||| Sbjct: 850 gcaacgatttgctcctggga 869
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 caccggaggcactccaggatgcggagcaccag 326 |||||||||||||||| ||| |||||||||| Sbjct: 143362 caccggaggcactccaaaatgaggagcaccag 143331
>dbj|AP006262.2| Homo sapiens genomic DNA, 8q24.3, PCR product: KPchr8gap12, complete sequence Length = 4841 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 2029 actccaccatcaccatcacc 2010 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 1750 actccaccatcaccatcacc 1731 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 1540 actccaccatcaccatcacc 1521 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 actccaccatcaccatcacc 360 |||||||||||||||||||| Sbjct: 1051 actccaccatcaccatcacc 1032
>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete sequence Length = 58663 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 caccggaggcactccaggatgcggagcaccag 326 |||||||||||||||| ||| |||||||||| Sbjct: 27622 caccggaggcactccaaaatgaggagcaccag 27591
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tccaccatcaccatcaccgt 362 |||||||||||||||||||| Sbjct: 11672523 tccaccatcaccatcaccgt 11672542
>emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563_B02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101314 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 tccaccatcaccatcaccgt 362 |||||||||||||||||||| Sbjct: 83814 tccaccatcaccatcaccgt 83795
>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence Length = 209693 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 88191 caccatcaccatcaccgtca 88210
>emb|AJ012100.1|SCO012100 Sirococcus conigenus species-specific RAPD fragment Length = 944 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 748 caccatcaccatcaccgtca 767
>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete sequence Length = 118465 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 caccatcaccatcaccgtca 364 |||||||||||||||||||| Sbjct: 58035 caccatcaccatcaccgtca 58016 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,296,686 Number of Sequences: 3902068 Number of extensions: 2296686 Number of successful extensions: 82658 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81893 Number of HSP's gapped (non-prelim): 764 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)