ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbah61e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193616.1| Oryza sativa (japonica cultivar-group), predic... 190 2e-45
2dbj|AK106333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 2e-45
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
4dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
5gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 46 0.091
6ref|XM_450144.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.36
7gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 44 0.36
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
10dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
11dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
12dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
13dbj|AK103068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
14dbj|AK064651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
15dbj|AB037135.2| Oryza sativa (japonica cultivar-group) OsORC1 mR... 44 0.36
16ref|XM_368314.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 42 1.4
17emb|AL590438.12| Human DNA sequence from clone RP11-22L13 on chr... 42 1.4
18gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Ca... 42 1.4
19gb|AE012310.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.4
20gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.4
21gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 40 5.6
22ref|XM_629928.1| Dictyostelium discoideum hypothetical protein (... 40 5.6
23gb|AC149762.2| Bos taurus BAC CH240-123C23 (Children's Hospital... 40 5.6
24gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 5.6
25ref|NM_028390.1| Mus musculus anillin, actin binding protein (sc... 40 5.6
26ref|XM_451080.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01826g ... 40 5.6
27gb|BC027141.1| Mus musculus anillin, actin binding protein (scra... 40 5.6
28gb|BT011378.1| Drosophila melanogaster LP12677 full insert cDNA 40 5.6
29emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chro... 40 5.6
30gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cance... 40 5.6
31gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, comple... 40 5.6
32gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete se... 40 5.6
33emb|AL356073.15| Human DNA sequence from clone RP11-813O3 on chr... 40 5.6
34ref|XM_795196.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.6
35emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.6
36emb|BX897679.1| Neurospora crassa DNA linkage group VI BAC clone... 40 5.6
37gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, c... 40 5.6
38gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.6
39gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complet... 40 5.6
40ref|NM_166460.2| Drosophila melanogaster CG30286-RA (CG30286), mRNA 40 5.6
41gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, compl... 40 5.6
42gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342... 40 5.6
43gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57... 40 5.6
44gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene se... 40 5.6
45gb|AC151277.3| Mus musculus BAC clone RP24-170B23 from chromosom... 40 5.6
46gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.6
47gb|AC011811.42| Homo sapiens clone b250a12, complete sequence 40 5.6
48gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 5.6
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
50gb|AC104634.5| Homo sapiens BAC clone RP11-793L24 from 2, comple... 40 5.6
51gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, comple... 40 5.6
52gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of... 40 5.6
53ref|XM_225479.3| PREDICTED: Rattus norvegicus similar to Anillin... 40 5.6
54ref|XM_343362.2| PREDICTED: Rattus norvegicus similar to Anillin... 40 5.6
55gb|AF043438.1|AF043438 Anopheles gambiae 18a putative pupal-spec... 40 5.6
56gb|AF043436.1|AF043436 Anopheles gambiae 13b putative pupal-spec... 40 5.6
57gb|AF043435.1|AF043435 Anopheles gambiae 13a pupal-specific cuti... 40 5.6
58gb|AF043433.1|AF043433 Anopheles gambiae putative pupal-specific... 40 5.6
59gb|AY142844.1| Heliobacillus mobilis Isoleucyl-tRNA synthetase g... 40 5.6
60ref|XM_319273.2| Anopheles gambiae str. PEST ENSANGP00000012316 ... 40 5.6
61dbj|AK109076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
62emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.6
63gb|BC032164.1| Mus musculus anillin, actin binding protein (scra... 40 5.6
64gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 40 5.6
65dbj|AP006262.2| Homo sapiens genomic DNA, 8q24.3, PCR product: K... 40 5.6
66gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 ... 40 5.6
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
68emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563... 40 5.6
69gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 40 5.6
70emb|AJ012100.1|SCO012100 Sirococcus conigenus species-specific R... 40 5.6
71dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.6 
>ref|NM_193616.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1365

 Score =  190 bits (96), Expect = 2e-45
 Identities = 197/231 (85%)
 Strand = Plus / Minus

                                                                        
Query: 141  cgcgtcgttaactgccttggtcatggcctcatggaacaatgcctggttccagtcgtcgtc 200
            |||||||||  | ||||| ||||| ||||| |||||| | |||| |||||| ||  |  |
Sbjct: 1323 cgcgtcgttcgccgccttcgtcatcgcctcgtggaacgacgcctcgttccaatctcctcc 1264

                                                                        
Query: 201  catgatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtc 260
            || |||| ||||||||||| |||||||||||||||| || | |||||  ||||| |||||
Sbjct: 1263 cacgatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtc 1204

                                                                        
Query: 261  ggcgtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggag 320
            ||||| ||||||||  ||||||| ||  | |||||||| |||||| ||||||||| ||||
Sbjct: 1203 ggcgtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggag 1144

                                                               
Query: 321  caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371
            |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1143 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 1093
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>dbj|AK106333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F10, full
            insert sequence
          Length = 1990

 Score =  190 bits (96), Expect = 2e-45
 Identities = 197/231 (85%)
 Strand = Plus / Minus

                                                                        
Query: 141  cgcgtcgttaactgccttggtcatggcctcatggaacaatgcctggttccagtcgtcgtc 200
            |||||||||  | ||||| ||||| ||||| |||||| | |||| |||||| ||  |  |
Sbjct: 1444 cgcgtcgttcgccgccttcgtcatcgcctcgtggaacgacgcctcgttccaatctcctcc 1385

                                                                        
Query: 201  catgatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtc 260
            || |||| ||||||||||| |||||||||||||||| || | |||||  ||||| |||||
Sbjct: 1384 cacgatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtc 1325

                                                                        
Query: 261  ggcgtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggag 320
            ||||| ||||||||  ||||||| ||  | |||||||| |||||| ||||||||| ||||
Sbjct: 1324 ggcgtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggag 1265

                                                               
Query: 321  caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371
            |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1264 caccagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 1214
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  184 bits (93), Expect = 2e-43
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                            
Query: 204      gatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtcggc 263
                |||| ||||||||||| |||||||||||||||| || | |||||  ||||| ||||||||
Sbjct: 22137752 gatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtcggc 22137693

                                                                            
Query: 264      gtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggagcac 323
                || ||||||||  ||||||| ||  | |||||||| |||||| ||||||||| |||||||
Sbjct: 22137692 gtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggagcac 22137633

                                                                
Query: 324      cagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371
                ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22137632 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 22137585
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>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1112D09
          Length = 125920

 Score =  184 bits (93), Expect = 2e-43
 Identities = 149/168 (88%)
 Strand = Plus / Minus

                                                                         
Query: 204   gatccggagcttgatgctggcgatggccttgagcagcacctgcgaggagtaagtgtcggc 263
             |||| ||||||||||| |||||||||||||||| || | |||||  ||||| ||||||||
Sbjct: 33238 gatctggagcttgatgttggcgatggccttgagaagaagctgcggcgagtaggtgtcggc 33179

                                                                         
Query: 264   gtcgacggacatgacgctgacctgntccatccaccggaggcactccaggatgcggagcac 323
             || ||||||||  ||||||| ||  | |||||||| |||||| ||||||||| |||||||
Sbjct: 33178 gtagacggacagcacgctgatctccttcatccacctgaggcattccaggatgtggagcac 33119

                                                             
Query: 324   cagctccaccacgtcgcactccaccatcaccatcaccgtcaggttcac 371
             ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 33118 cagctccaccacgtcgcactccaccatcaccatcaccgtcaggctcac 33071
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 320     gcaccagctccaccacgtcgcac 342
               |||||||||||||||||||||||
Sbjct: 1716096 gcaccagctccaccacgtcgcac 1716074
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>ref|XM_450144.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1087

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 300 gaggcactccaggatgcggagc 321
           ||||||||||||||||||||||
Sbjct: 289 gaggcactccaggatgcggagc 268
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 219    gctggcgatggccttgagcagc 240
              ||||||||||||||||||||||
Sbjct: 898260 gctggcgatggccttgagcagc 898239
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 300     gaggcactccaggatgcggagc 321
               ||||||||||||||||||||||
Sbjct: 1995653 gaggcactccaggatgcggagc 1995632
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 333     cacgtcgcactccaccatcacc 354
               ||||||||||||||||||||||
Sbjct: 4404823 cacgtcgcactccaccatcacc 4404802
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>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1352_A10
          Length = 111655

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 300   gaggcactccaggatgcggagc 321
             ||||||||||||||||||||||
Sbjct: 31020 gaggcactccaggatgcggagc 30999
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>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   cacgtcgcactccaccatcacc 354
             ||||||||||||||||||||||
Sbjct: 52504 cacgtcgcactccaccatcacc 52483
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>dbj|AP005725.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0025H18
          Length = 176201

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 300    gaggcactccaggatgcggagc 321
              ||||||||||||||||||||||
Sbjct: 144821 gaggcactccaggatgcggagc 144800
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>dbj|AK103068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P13, full
           insert sequence
          Length = 2758

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 333 cacgtcgcactccaccatcacc 354
           ||||||||||||||||||||||
Sbjct: 585 cacgtcgcactccaccatcacc 564
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>dbj|AK064651.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E09, full
           insert sequence
          Length = 1087

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 300 gaggcactccaggatgcggagc 321
           ||||||||||||||||||||||
Sbjct: 289 gaggcactccaggatgcggagc 268
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>dbj|AB037135.2| Oryza sativa (japonica cultivar-group) OsORC1 mRNA for origin
           recognition complex 1, complete cds
          Length = 2827

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 333 cacgtcgcactccaccatcacc 354
           ||||||||||||||||||||||
Sbjct: 632 cacgtcgcactccaccatcacc 611
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>ref|XM_368314.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
            (MG00930.4) partial mRNA
          Length = 3615

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 221  tggcgatggccttgagcagca 241
            |||||||||||||||||||||
Sbjct: 3419 tggcgatggccttgagcagca 3439
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>emb|AL590438.12| Human DNA sequence from clone RP11-22L13 on chromosome 1 Contains part
             of the PRDM16 gene for PR domain containing 16, complete
             sequence
          Length = 99477

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   ccaccatcaccatcaccgtca 364
             |||||||||||||||||||||
Sbjct: 50120 ccaccatcaccatcaccgtca 50100
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>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 87201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   ccaccatcaccatcaccgtca 364
             |||||||||||||||||||||
Sbjct: 56992 ccaccatcaccatcaccgtca 56972
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>gb|AE012310.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 218
            of 460 of the complete genome
          Length = 10787

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 361  gtcaggttcacaacctcgtccgatg 385
            |||||||||||||||||| ||||||
Sbjct: 3912 gtcaggttcacaacctcggccgatg 3936
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 361     gtcaggttcacaacctcgtccgatg 385
               |||||||||||||||||| ||||||
Sbjct: 2566551 gtcaggttcacaacctcggccgatg 2566527
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>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 95573 caccatcaccatcaccgtca 95554
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>ref|XM_629928.1| Dictyostelium discoideum hypothetical protein (DDB0184065), partial
           mRNA
          Length = 2970

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 caccatcaccatcaccgtca 364
           ||||||||||||||||||||
Sbjct: 275 caccatcaccatcaccgtca 294
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>gb|AC149762.2| Bos taurus  BAC CH240-123C23 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 187366

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   actccaccatcaccatcacc 360
             ||||||||||||||||||||
Sbjct: 50951 actccaccatcaccatcacc 50932
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     agtcgtcgtccatgatccgg 210
               ||||||||||||||||||||
Sbjct: 3573447 agtcgtcgtccatgatccgg 3573428
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>ref|NM_028390.1| Mus musculus anillin, actin binding protein (scraps homolog,
           Drosophila) (Anln), mRNA
          Length = 4653

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcaacgatttgctcctggga 73
           ||||||||||||||||||||
Sbjct: 850 gcaacgatttgctcctggga 869
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>ref|XM_451080.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01826g predicted mRNA
          Length = 4395

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 345  caccatcaccatcaccgtca 364
            ||||||||||||||||||||
Sbjct: 1010 caccatcaccatcaccgtca 1029
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>gb|BC027141.1| Mus musculus anillin, actin binding protein (scraps homolog,
           Drosophila), mRNA (cDNA clone IMAGE:4947342), containing
           frame-shift errors
          Length = 1532

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcaacgatttgctcctggga 73
           ||||||||||||||||||||
Sbjct: 796 gcaacgatttgctcctggga 815
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>gb|BT011378.1| Drosophila melanogaster LP12677 full insert cDNA
          Length = 920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 295 caccggaggcactccaggatgcggagcaccag 326
           ||||||||||||||||  ||| ||||||||||
Sbjct: 97  caccggaggcactccaaaatgaggagcaccag 128
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>emb|CT009708.6| Mouse DNA sequence from clone RP23-82F10 on chromosome 9, complete
             sequence
          Length = 247670

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 88491 caccatcaccatcaccgtca 88472
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>gb|AC011325.17| Homo sapiens 3 BAC RP11-17P4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    caccatcaccatcaccgtca 364
              ||||||||||||||||||||
Sbjct: 138771 caccatcaccatcaccgtca 138790



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 310    aggatgcggagcaccagctccacc 333
              |||||||||||| |||||||||||
Sbjct: 130623 aggatgcggagctccagctccacc 130646
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>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence
          Length = 178113

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 44181 caccatcaccatcaccgtca 44200
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>gb|AC148171.16| Medicago truncatula clone mth2-30a2, complete sequence
          Length = 158384

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    cactccaccatcaccatcac 359
              ||||||||||||||||||||
Sbjct: 107462 cactccaccatcaccatcac 107481



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   cactccaccatcaccatcac 359
             ||||||||||||||||||||
Sbjct: 93868 cactccaccatcaccatcac 93887
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>emb|AL356073.15| Human DNA sequence from clone RP11-813O3 on chromosome 10, complete
             sequence
          Length = 165917

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   actccaccatcaccatcacc 360
             ||||||||||||||||||||
Sbjct: 46643 actccaccatcaccatcacc 46662
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>ref|XM_795196.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC584465 (LOC584465), mRNA
          Length = 219

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 caccatcaccatcaccgtca 364
           ||||||||||||||||||||
Sbjct: 111 caccatcaccatcaccgtca 130
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    caccatcaccatcaccgtca 364
              ||||||||||||||||||||
Sbjct: 166395 caccatcaccatcaccgtca 166376
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>emb|BX897679.1| Neurospora crassa DNA linkage group VI BAC clone B2C22
          Length = 66491

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 45927 caccatcaccatcaccgtca 45908
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>gb|AC129507.9| Homo sapiens chromosome 17, clone RP11-1260E13, complete sequence
          Length = 199102

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 95665 caccatcaccatcaccgtca 95646
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     gctggcgatggccttgagca 238
               ||||||||||||||||||||
Sbjct: 5342853 gctggcgatggccttgagca 5342834



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 345     caccatcaccatcaccgtca 364
               ||||||||||||||||||||
Sbjct: 1752684 caccatcaccatcaccgtca 1752665
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>gb|AC106865.4| Homo sapiens BAC clone RP11-153M7 from 4, complete sequence
          Length = 152118

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   actccaccatcaccatcacc 360
             ||||||||||||||||||||
Sbjct: 95941 actccaccatcaccatcacc 95922
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>ref|NM_166460.2| Drosophila melanogaster CG30286-RA (CG30286), mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 295 caccggaggcactccaggatgcggagcaccag 326
           ||||||||||||||||  ||| ||||||||||
Sbjct: 43  caccggaggcactccaaaatgaggagcaccag 74
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>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence
          Length = 95782

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 45460 caccatcaccatcaccgtca 45479
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>gb|AC093926.6| Genomic sequence for Mus musculus, clone RP23-342N3, complete sequence
          Length = 210913

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gcaacgatttgctcctggga 73
              ||||||||||||||||||||
Sbjct: 124543 gcaacgatttgctcctggga 124562
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>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone
              BACR13H23, complete sequence
          Length = 179139

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 295    caccggaggcactccaggatgcggagcaccag 326
              ||||||||||||||||  ||| ||||||||||
Sbjct: 153527 caccggaggcactccaaaatgaggagcaccag 153496
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>gb|AF381614.1|AF381614 Magnaporthe grisea clone BAC 14F6 gene sequence
          Length = 110467

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   aatgcctggttccagtcgtc 197
             ||||||||||||||||||||
Sbjct: 88477 aatgcctggttccagtcgtc 88458
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>gb|AC151277.3| Mus musculus BAC clone RP24-170B23 from chromosome 17, complete
            sequence
          Length = 146255

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 147  gttaactgccttggtcatgg 166
            ||||||||||||||||||||
Sbjct: 6199 gttaactgccttggtcatgg 6218
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 216     gatgctggcgatggccttga 235
               ||||||||||||||||||||
Sbjct: 2888209 gatgctggcgatggccttga 2888190
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>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence
          Length = 231739

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    caccatcaccatcaccgtca 364
              ||||||||||||||||||||
Sbjct: 184275 caccatcaccatcaccgtca 184256
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tggcgatggccttgagcagc 240
              ||||||||||||||||||||
Sbjct: 924984 tggcgatggccttgagcagc 925003
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 343      tccaccatcaccatcaccgt 362
                ||||||||||||||||||||
Sbjct: 11672852 tccaccatcaccatcaccgt 11672871
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>gb|AC104634.5| Homo sapiens BAC clone RP11-793L24 from 2, complete sequence
          Length = 115758

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 21405 caccatcaccatcaccgtca 21424
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>gb|AC018735.12| Homo sapiens BAC clone RP11-372A6 from 2, complete sequence
          Length = 208924

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 24387 caccatcaccatcaccgtca 24406
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>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete genome
          Length = 11746

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  ggcgatggccttgagcagca 241
            ||||||||||||||||||||
Sbjct: 9054 ggcgatggccttgagcagca 9073
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>ref|XM_225479.3| PREDICTED: Rattus norvegicus similar to Anillin (LOC307056), mRNA
          Length = 3242

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcaacgatttgctcctggga 73
           ||||||||||||||||||||
Sbjct: 355 gcaacgatttgctcctggga 374
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>ref|XM_343362.2| PREDICTED: Rattus norvegicus similar to Anillin (LOC363031), mRNA
          Length = 3327

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcaacgatttgctcctggga 73
           ||||||||||||||||||||
Sbjct: 661 gcaacgatttgctcctggga 680
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>gb|AF043438.1|AF043438 Anopheles gambiae 18a putative pupal-specific cuticular protein
           CP2b mRNA, complete cds
          Length = 798

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 ccacgtcgcactccaccatc 351
           ||||||||||||||||||||
Sbjct: 105 ccacgtcgcactccaccatc 124
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>gb|AF043436.1|AF043436 Anopheles gambiae 13b putative pupal-specific cuticular protein
           CP2c mRNA, complete cds
          Length = 874

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 ccacgtcgcactccaccatc 351
           ||||||||||||||||||||
Sbjct: 104 ccacgtcgcactccaccatc 123
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>gb|AF043435.1|AF043435 Anopheles gambiae 13a pupal-specific cuticular protein CP2b mRNA,
           complete cds
          Length = 779

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 ccacgtcgcactccaccatc 351
           ||||||||||||||||||||
Sbjct: 86  ccacgtcgcactccaccatc 105
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>gb|AF043433.1|AF043433 Anopheles gambiae putative pupal-specific cuticular protein (cp2a),
            putative pupal-specific cuticular protein (cp2b), and
            putative pupal-specific cuticular protein (cp2c) genes,
            complete cds
          Length = 17406

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  ccacgtcgcactccaccatc 351
            ||||||||||||||||||||
Sbjct: 2060 ccacgtcgcactccaccatc 2079
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>gb|AY142844.1| Heliobacillus mobilis Isoleucyl-tRNA synthetase gene, partial cds
          Length = 2262

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 298  cggaggcactccaggatgcggagc 321
            |||||||| |||||||||||||||
Sbjct: 2099 cggaggcattccaggatgcggagc 2122
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>ref|XM_319273.2| Anopheles gambiae str. PEST ENSANGP00000012316
           (ENSANGG00000009827), partial mRNA
          Length = 681

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 ccacgtcgcactccaccatc 351
           ||||||||||||||||||||
Sbjct: 83  ccacgtcgcactccaccatc 102
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>dbj|AK109076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G08, full
           insert sequence
          Length = 946

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 344 ccaccatcaccatcaccgtc 363
           ||||||||||||||||||||
Sbjct: 458 ccaccatcaccatcaccgtc 477
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    tggcgatggccttgagcagc 240
              ||||||||||||||||||||
Sbjct: 838199 tggcgatggccttgagcagc 838218
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>gb|BC032164.1| Mus musculus anillin, actin binding protein (scraps homolog,
           Drosophila), mRNA (cDNA clone MGC:38439 IMAGE:5346703),
           complete cds
          Length = 4653

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  gcaacgatttgctcctggga 73
           ||||||||||||||||||||
Sbjct: 850 gcaacgatttgctcctggga 869
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>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
              sequence
          Length = 313634

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 295    caccggaggcactccaggatgcggagcaccag 326
              ||||||||||||||||  ||| ||||||||||
Sbjct: 143362 caccggaggcactccaaaatgaggagcaccag 143331
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>dbj|AP006262.2| Homo sapiens genomic DNA, 8q24.3, PCR product: KPchr8gap12, complete
            sequence
          Length = 4841

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  actccaccatcaccatcacc 360
            ||||||||||||||||||||
Sbjct: 2029 actccaccatcaccatcacc 2010



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  actccaccatcaccatcacc 360
            ||||||||||||||||||||
Sbjct: 1750 actccaccatcaccatcacc 1731



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  actccaccatcaccatcacc 360
            ||||||||||||||||||||
Sbjct: 1540 actccaccatcaccatcacc 1521



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  actccaccatcaccatcacc 360
            ||||||||||||||||||||
Sbjct: 1051 actccaccatcaccatcacc 1032
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>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete
             sequence
          Length = 58663

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 295   caccggaggcactccaggatgcggagcaccag 326
             ||||||||||||||||  ||| ||||||||||
Sbjct: 27622 caccggaggcactccaaaatgaggagcaccag 27591
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 343      tccaccatcaccatcaccgt 362
                ||||||||||||||||||||
Sbjct: 11672523 tccaccatcaccatcaccgt 11672542
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>emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563_B02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101314

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   tccaccatcaccatcaccgt 362
             ||||||||||||||||||||
Sbjct: 83814 tccaccatcaccatcaccgt 83795
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>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 88191 caccatcaccatcaccgtca 88210
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>emb|AJ012100.1|SCO012100 Sirococcus conigenus species-specific RAPD fragment
          Length = 944

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 345 caccatcaccatcaccgtca 364
           ||||||||||||||||||||
Sbjct: 748 caccatcaccatcaccgtca 767
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>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete
             sequence
          Length = 118465

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   caccatcaccatcaccgtca 364
             ||||||||||||||||||||
Sbjct: 58035 caccatcaccatcaccgtca 58016


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,296,686
Number of Sequences: 3902068
Number of extensions: 2296686
Number of successful extensions: 82658
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81893
Number of HSP's gapped (non-prelim): 764
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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